View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0914_low_76 (Length: 257)

Name: NF0914_low_76
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0914_low_76
NF0914_low_76
[»] chr3 (22 HSPs)
chr3 (29-257)||(42848066-42848294)
chr3 (153-257)||(47948392-47948496)
chr3 (153-257)||(35171191-35171295)
chr3 (153-257)||(40650373-40650477)
chr3 (174-257)||(31309181-31309264)
chr3 (167-257)||(46959854-46959944)
chr3 (157-257)||(42067880-42067981)
chr3 (157-257)||(29786537-29786638)
chr3 (157-257)||(44365911-44366011)
chr3 (153-257)||(378603-378706)
chr3 (157-257)||(876226-876326)
chr3 (157-257)||(38785086-38785186)
chr3 (157-257)||(42363932-42364032)
chr3 (157-257)||(11140548-11140647)
chr3 (157-257)||(44670263-44670362)
chr3 (157-231)||(29347315-29347389)
chr3 (157-257)||(45636390-45636491)
chr3 (157-228)||(39629952-39630023)
chr3 (215-257)||(4660057-4660099)
chr3 (157-214)||(37492241-37492298)
chr3 (153-232)||(52162710-52162789)
chr3 (229-257)||(37492219-37492247)
[»] chr7 (13 HSPs)
chr7 (153-257)||(30863095-30863199)
chr7 (153-257)||(38129385-38129489)
chr7 (153-257)||(30623720-30623824)
chr7 (167-257)||(1691007-1691097)
chr7 (157-257)||(41913100-41913199)
chr7 (183-257)||(3910232-3910307)
chr7 (157-257)||(28327368-28327469)
chr7 (157-252)||(27956591-27956687)
chr7 (157-257)||(42711232-42711331)
chr7 (157-257)||(40942178-40942278)
chr7 (157-257)||(41381784-41381885)
chr7 (159-257)||(21699298-21699396)
chr7 (157-226)||(45461660-45461729)
[»] chr6 (11 HSPs)
chr6 (153-257)||(4110857-4110961)
chr6 (153-257)||(13390690-13390794)
chr6 (153-257)||(1096519-1096622)
chr6 (153-257)||(26358552-26358656)
chr6 (167-257)||(8401428-8401519)
chr6 (167-257)||(24213214-24213304)
chr6 (157-250)||(32833778-32833871)
chr6 (172-257)||(24487304-24487390)
chr6 (157-257)||(2259207-2259306)
chr6 (157-257)||(17545906-17546005)
chr6 (157-235)||(6848839-6848916)
[»] chr5 (21 HSPs)
chr5 (153-257)||(3056698-3056802)
chr5 (153-257)||(36338845-36338949)
chr5 (153-257)||(2141544-2141648)
chr5 (153-257)||(1661692-1661796)
chr5 (153-257)||(18228460-18228564)
chr5 (157-257)||(32467345-32467445)
chr5 (153-257)||(2414226-2414330)
chr5 (153-257)||(9535169-9535273)
chr5 (157-257)||(6561128-6561228)
chr5 (157-257)||(43237359-43237459)
chr5 (157-257)||(13410843-13410944)
chr5 (157-257)||(34302950-34303050)
chr5 (172-257)||(21605951-21606037)
chr5 (167-255)||(6532884-6532972)
chr5 (167-257)||(24098172-24098262)
chr5 (188-257)||(2029655-2029724)
chr5 (184-257)||(6318317-6318390)
chr5 (157-257)||(42917420-42917520)
chr5 (188-257)||(6113808-6113878)
chr5 (176-257)||(22780815-22780896)
chr5 (157-232)||(13091240-13091315)
[»] chr4 (24 HSPs)
chr4 (153-257)||(34280224-34280328)
chr4 (153-257)||(33075979-33076084)
chr4 (152-257)||(46042003-46042108)
chr4 (153-257)||(30539862-30539966)
chr4 (157-257)||(47302282-47302382)
chr4 (153-257)||(52589374-52589478)
chr4 (176-257)||(3716627-3716708)
chr4 (152-257)||(27539219-27539324)
chr4 (153-257)||(43137371-43137475)
chr4 (157-257)||(37518969-37519069)
chr4 (157-257)||(37523185-37523285)
chr4 (157-257)||(48578911-48579010)
chr4 (157-257)||(52592095-52592195)
chr4 (157-257)||(30343129-30343230)
chr4 (157-257)||(41759663-41759762)
chr4 (167-257)||(55722780-55722869)
chr4 (157-257)||(37855423-37855524)
chr4 (157-257)||(51435816-51435917)
chr4 (157-257)||(38836152-38836252)
chr4 (157-257)||(11109600-11109702)
chr4 (188-257)||(14803014-14803084)
chr4 (157-257)||(53388850-53388950)
chr4 (157-257)||(28037987-28038087)
chr4 (206-246)||(43147803-43147843)
[»] chr1 (27 HSPs)
chr1 (153-257)||(18642171-18642275)
chr1 (153-257)||(39971269-39971373)
chr1 (153-257)||(45423917-45424021)
chr1 (153-257)||(23459549-23459653)
chr1 (153-257)||(39190563-39190667)
chr1 (154-257)||(45673619-45673722)
chr1 (153-257)||(46770731-46770835)
chr1 (156-257)||(51520116-51520217)
chr1 (157-257)||(8461531-8461631)
chr1 (153-257)||(38262134-38262237)
chr1 (157-257)||(51985237-51985337)
chr1 (170-257)||(43306835-43306921)
chr1 (174-257)||(50905881-50905964)
chr1 (157-257)||(23057002-23057103)
chr1 (157-257)||(23061303-23061404)
chr1 (157-257)||(35305453-35305554)
chr1 (157-257)||(37499045-37499144)
chr1 (176-257)||(6520009-6520091)
chr1 (157-257)||(921846-921946)
chr1 (167-257)||(51369619-51369710)
chr1 (157-257)||(5956530-5956631)
chr1 (157-257)||(26102477-26102577)
chr1 (167-257)||(28494073-28494162)
chr1 (176-257)||(52303315-52303396)
chr1 (196-257)||(29106408-29106468)
chr1 (209-257)||(16482878-16482926)
chr1 (184-232)||(24381647-24381695)
[»] chr2 (16 HSPs)
chr2 (153-257)||(42427568-42427672)
chr2 (157-257)||(3383195-3383296)
chr2 (158-257)||(15771314-15771413)
chr2 (157-255)||(14532828-14532926)
chr2 (157-257)||(4673605-4673706)
chr2 (174-257)||(6884463-6884547)
chr2 (167-257)||(11813206-11813297)
chr2 (166-257)||(33423047-33423138)
chr2 (157-257)||(37083512-37083613)
chr2 (185-257)||(59220-59292)
chr2 (157-257)||(3810454-3810554)
chr2 (157-257)||(34665873-34665972)
chr2 (157-257)||(1353809-1353908)
chr2 (157-257)||(5389206-5389305)
chr2 (157-257)||(11227930-11228029)
chr2 (157-257)||(38963071-38963172)
[»] chr8 (22 HSPs)
chr8 (153-257)||(14498304-14498408)
chr8 (154-257)||(38502493-38502595)
chr8 (159-257)||(10280862-10280960)
chr8 (158-257)||(29229181-29229281)
chr8 (157-257)||(15725894-15725994)
chr8 (153-257)||(36002661-36002765)
chr8 (157-257)||(23274925-23275026)
chr8 (157-257)||(29459936-29460037)
chr8 (157-257)||(946271-946373)
chr8 (157-257)||(37511390-37511491)
chr8 (157-257)||(34332414-34332513)
chr8 (170-257)||(12162957-12163045)
chr8 (170-257)||(12407385-12407473)
chr8 (157-257)||(44935201-44935300)
chr8 (157-257)||(37161810-37161916)
chr8 (177-257)||(23275092-23275173)
chr8 (157-257)||(28090493-28090592)
chr8 (157-257)||(29773747-29773846)
chr8 (157-256)||(39171002-39171103)
chr8 (157-257)||(23286867-23286967)
chr8 (176-257)||(39171105-39171185)
chr8 (183-238)||(29265619-29265674)
[»] scaffold0077 (1 HSPs)
scaffold0077 (157-257)||(48312-48411)
[»] scaffold0005 (1 HSPs)
scaffold0005 (188-257)||(36643-36713)
[»] scaffold0283 (1 HSPs)
scaffold0283 (157-257)||(6541-6640)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 29 - 257
Target Start/End: Original strand, 42848066 - 42848294
Alignment:
Q  29 acaagtgtggtggatgtggtactgaccttcaaggtgaaaaatcttttctgtttttgtataccattgtactcttcaatattaccctgtttcaaaattatgc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42848066 acaagtgtggtggatgtggtactgaccttcaaggtgaaaaatcttttctgtttttgtataccattgtactcttcaatattaccctgtttcaaaattatgc 42848165  T
Q  129 agnnnnnnnnnnnnnnnnnntctgggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcat 228  Q
    ||                  ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  42848166 agaaaaaataaaataaaaaatctgggggacttctatgatacacccgtaaatgacggtgtaccggtactcccgcttacaatttttataaattaactatcat 42848265  T
Q  229 tttttatgaagaaaataggtgtttgttga 257  Q
    |||||||||||||||||||||||||||||    
T  42848266 tttttatgaagaaaataggtgtttgttga 42848294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 47948392 - 47948496
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47948392 ggggacttctatggtacacccgtaaatgacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 47948491  T
Q  253 gttga 257  Q
    |||||    
T  47948492 gttga 47948496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 35171191 - 35171295
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35171191 ggggatttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 35171290  T
Q  253 gttga 257  Q
    |||||    
T  35171291 gttga 35171295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 40650477 - 40650373
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40650477 ggggacttctatggtacactcgtaaattacggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 40650378  T
Q  253 gttga 257  Q
    |||||    
T  40650377 gttga 40650373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 31309264 - 31309181
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31309264 gtaaattacggtgtaccggtactctcggttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttga 31309181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 46959944 - 46959854
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||| | ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46959944 tacacctgcaaattacggtgtatcggtactctcgcttacaacttttataaattaactatcattttttatgaagaaaataggtgtttgttga 46959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 42067981 - 42067880
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  42067981 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 42067882  T
Q  256 ga 257  Q
    ||    
T  42067881 ga 42067880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 29786537 - 29786638
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  29786537 acttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataagtgtttgtt 29786636  T
Q  256 ga 257  Q
    ||    
T  29786637 ga 29786638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 44366011 - 44365911
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  44366011 acttctatggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 44365913  T
Q  256 ga 257  Q
    ||    
T  44365912 ga 44365911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 378603 - 378706
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||| ||||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  378603 ggggacttctatggtacacccgtaaattacagtgtaccggtaccatcacttt-aatttttataaattaactatcattttttatgaagaaaataagtgttt 378701  T
Q  253 gttga 257  Q
    |||||    
T  378702 gttga 378706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 876226 - 876326
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  876226 acttctacggtacacccgcaaattacgatgtactggtactctcgcttataatttttataatttaactatcattttttatgaagaaaatagttgtttgttg 876325  T
Q  257 a 257  Q
    |    
T  876326 a 876326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 38785086 - 38785186
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaa-tttttataaattaactatcattttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  38785086 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactat-aatttttatgaagaaaataggtgtttgtt 38785184  T
Q  256 ga 257  Q
    ||    
T  38785185 ga 38785186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 42363932 - 42364032
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | ||||||||||||| ||||||||| | ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  42363932 acttctacggtacacctgcaaattacggtgtatcggtactctagcttacaatttttataatttaactataattttttatgaaaaaaataggtgtttgttg 42364031  T
Q  257 a 257  Q
    |    
T  42364032 a 42364032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 11140647 - 11140548
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||| ||||||||||  |||||||||||||||| ||  ||||||||||||||||    
T  11140647 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaacaaactatcattttttataaaagaaataggtgtttgttg 11140549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 44670263 - 44670362
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||| |||||||||| ||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  44670263 acttctacggtacatccgtaaattaaggtgtgccggtactttcgcttaca-tttttataaattaactatcattttttatgaaagaaataagtgtttgttg 44670361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 29347315 - 29347389
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttt 231  Q
    ||||||| | |||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29347315 acttctacggtacacccgcaaattgcagtgtaccggtactctcgcttacaatttttataaattaactatcatttt 29347389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 45636491 - 45636390
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | ||||| |||||||||   | ||| ||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  45636491 acttctacggtacactcgtaaattaaaatatactggtacactcgcttataatttttataaattaactatcattttttatgaaagaaaataggtatttgtt 45636392  T
Q  256 ga 257  Q
    ||    
T  45636391 ga 45636390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 39629952 - 39630023
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcat 228  Q
    ||||||| | |||| ||| |||||| | |||||||||||| ||| |||||||||||||||||||||||||||    
T  39629952 acttctacggtacatccgcaaattaagatgtaccggtactatcgcttacaatttttataaattaactatcat 39630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 4660099 - 4660057
Alignment:
Q  215 aaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  4660099 aaattaactatcattttttatgaaaaaaatagctgtttgttga 4660057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 37492298 - 37492241
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttat 214  Q
    ||||||| | |||| ||| ||||||||||||||||||||||||| ||| |||||||||    
T  37492298 acttctacggtacatccgcaaattacggtgtaccggtactctcgcttataatttttat 37492241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 52162789 - 52162710
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||||||| ||||||| |||||||| | ||||||||||||||| |||| | |  | ||||||||||| |||| ||||    
T  52162789 ggggacttctacgatacactcgtaaattgcagtgtaccggtactcttgtttcctaaatctataaattaacgatcaatttt 52162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 37492247 - 37492219
Alignment:
Q  229 tttttatgaagaaaataggtgtttgttga 257  Q
    |||||||||||||||||||||||||||||    
T  37492247 tttttatgaagaaaataggtgtttgttga 37492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 30863199 - 30863095
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30863199 ggggacttctattgtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 30863100  T
Q  253 gttga 257  Q
    |||||    
T  30863099 gttga 30863095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 38129385 - 38129489
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38129385 ggggacttctatggtacacccgtaaattacggtgtaccggtattcttgcttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 38129484  T
Q  253 gttga 257  Q
    |||||    
T  38129485 gttga 38129489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 30623720 - 30623824
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  30623720 ggggacttctatggtacacccataaattacggtgtaccgatactctcgcttacaatttttataaattaactatcattttttataaagaaaataagtgttt 30623819  T
Q  253 gttga 257  Q
    |||||    
T  30623820 gttga 30623824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 1691007 - 1691097
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1691007 tacacccgtaaattatggtataccggtactctcatttacaatttttttaaattaactatcattttttatgaagaaaataggtgtttgttga 1691097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 41913100 - 41913199
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  41913100 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 41913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 3910307 - 3910232
Alignment:
Q  183 ggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3910307 ggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 3910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 28327469 - 28327368
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  28327469 acttctacggtacacccgcaaattaagctgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 28327370  T
Q  256 ga 257  Q
    ||    
T  28327369 ga 28327368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 27956687 - 27956591
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttat-gaagaaaataggtgttt 252  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  27956687 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacaaattttataaattaactatcattttttgtaaaagaaaataggtgttt 27956591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 42711331 - 42711232
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||| ||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  42711331 acttctacggtacatccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 42711233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 40942278 - 40942178
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||||| |||| |||||||||| | |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  40942278 acttctatggtacatccgtaaattaagatgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 40942180  T
Q  256 ga 257  Q
    ||    
T  40942179 ga 40942178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 41381885 - 41381784
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||  ||| ||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  41381885 acttctacggtacacccgtaaattaatgtgcaccggtacttttgcttacaatttttataaattaactatcattttttatgaaagaaaataggtctttgtt 41381786  T
Q  256 ga 257  Q
    ||    
T  41381785 ga 41381784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 21699298 - 21699396
Alignment:
Q  159 ttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgttga 257  Q
    ||||||| ||||| || |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||  |||||||||||||||||    
T  21699298 ttctatggtacactcgcaaattaaggtgtaccgatactctcgtttac-atttttataaattaattatcatttttttatgaaagaaataggtgtttgttga 21699396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 45461729 - 45461660
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatc 226  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  45461729 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataatttaactatc 45461660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 4110961 - 4110857
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4110961 ggggacttctatggtacacccgtaaattacggtgtaccggttctctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 4110862  T
Q  253 gttga 257  Q
    |||||    
T  4110861 gttga 4110857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 13390794 - 13390690
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13390794 ggggacttctatggtacacctgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 13390695  T
Q  253 gttga 257  Q
    |||||    
T  13390694 gttga 13390690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 1096622 - 1096519
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  1096622 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactat-aatttttatgaggaaaataggtgttt 1096524  T
Q  253 gttga 257  Q
    |||||    
T  1096523 gttga 1096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 26358552 - 26358656
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    |||||||| |||| |||| |||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  26358552 ggggacttttatggtacaaccgtaaattatggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaatacgtgttt 26358651  T
Q  253 gttga 257  Q
    |||||    
T  26358652 gttga 26358656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 8401428 - 8401519
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgttga 257  Q
    |||||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8401428 tacacccgcaaattacggtgtaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgttga 8401519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 24213304 - 24213214
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||| |||||||||| || ||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24213304 tacacccgcaaattacggtatatcggtactttcacttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 24213214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 32833778 - 32833871
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgt 250  Q
    ||||||| | |||| ||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32833778 acttctacggtacatccgcaaattacggtgtactggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgt 32833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 24487304 - 24487390
Alignment:
Q  172 ccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  24487304 ccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgttga 24487390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 2259306 - 2259207
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  2259306 acttctacggtacacccgcaaattaaggtgtacaggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 2259208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 17546005 - 17545906
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||||  |||||||| |||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17546005 acttctatagtacacccgcaaattaaggtgtactggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 17545907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 6848916 - 6848839
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttat 235  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6848916 acttctacggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttat 6848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 3056802 - 3056698
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3056802 ggggacttctatggtacactcgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 3056703  T
Q  253 gttga 257  Q
    |||||    
T  3056702 gttga 3056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 36338845 - 36338949
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36338845 ggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 36338944  T
Q  253 gttga 257  Q
    |||||    
T  36338945 gttga 36338949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 2141648 - 2141544
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2141648 ggggacttctatggtacacccataaattacggtgtaccgttactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 2141549  T
Q  253 gttga 257  Q
    |||||    
T  2141548 gttga 2141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 1661692 - 1661796
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    |||||||| |||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1661692 ggggacttatatggtacacctgtaaattacggtgtaccggtgctctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgttt 1661791  T
Q  253 gttga 257  Q
    |||||    
T  1661792 gttga 1661796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 18228460 - 18228564
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18228460 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaatacgtgttt 18228559  T
Q  253 gttga 257  Q
    |||||    
T  18228560 gttga 18228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 32467445 - 32467345
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32467445 acttctacggtacacccgcaaattacggtgtaccggtactctcgcttgcaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 32467346  T
Q  257 a 257  Q
    |    
T  32467345 a 32467345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 2414330 - 2414226
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2414330 ggggacttctatggtacatccgtaaattacagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 2414231  T
Q  253 gttga 257  Q
    |||||    
T  2414230 gttga 2414226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 9535273 - 9535169
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||  ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9535273 ggggacttctatggtacacccgtaaattaaagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 9535174  T
Q  253 gttga 257  Q
    |||||    
T  9535173 gttga 9535169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 6561228 - 6561128
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | ||||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6561228 acttctacggtacacctgcaaattacggtgtaccggtattcttgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttg 6561129  T
Q  257 a 257  Q
    |    
T  6561128 a 6561128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 43237359 - 43237459
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||||| |||||| | ||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  43237359 acttctatggtacacctgcaaattacggtgtatcggtactctcgcttacaatttttataaattaattataattttttatgaagaaaataggtgttggttg 43237458  T
Q  257 a 257  Q
    |    
T  43237459 a 43237459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 13410944 - 13410843
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13410944 acttctacggtacatccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 13410845  T
Q  256 ga 257  Q
    ||    
T  13410844 ga 13410843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 34303050 - 34302950
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | ||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  34303050 acttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaaaaaataggtgtttgttg 34302951  T
Q  257 a 257  Q
    |    
T  34302950 a 34302950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 257
Target Start/End: Complemental strand, 21606037 - 21605951
Alignment:
Q  172 ccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  21606037 ccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgttga 21605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 6532972 - 6532884
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 255  Q
    |||| ||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6532972 tacatccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcatgttttatgaagaaaataggtgtttgtt 6532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 24098262 - 24098172
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||||||||||| || ||||||||    
T  24098262 tacacctgcaaattacggtgtactggtactctcgcttacaatttttataaataaaatatcattttttatgaagaaaataagtctttgttga 24098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 2029724 - 2029655
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  2029724 accgatactctcgcttacaatttttataatttaactgtcattttttatgaagaaaataggtgtttgttga 2029655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 6318317 - 6318390
Alignment:
Q  184 gtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  6318317 gtgtagcggtactctcgcttacaatttttataaattaactataattttttacgaagaaaataggtatttgttga 6318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 42917520 - 42917420
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaagaaaataggtgtttgtt 255  Q
    |||| |||| |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  42917520 acttttatggtacacccacaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 42917422  T
Q  256 ga 257  Q
    ||    
T  42917421 ga 42917420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 6113808 - 6113878
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  6113808 accggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaattggtgtttgttga 6113878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 22780896 - 22780815
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||| | |||||||| ||||| ||||| ||  |||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  22780896 aaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaatagttgtttgttga 22780815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 13091315 - 13091240
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||| | ||||||||||||||| ||||||||||||||||   ||  ||  |||||||||||||||||||||||    
T  13091315 acttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 13091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 34280224 - 34280328
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34280224 ggggacttctatggtacacccgtaaattgcggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 34280323  T
Q  253 gttga 257  Q
    |||||    
T  34280324 gttga 34280328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 33075979 - 33076084
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtt 251  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33075979 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttttatgaagaaaataggtgtt 33076078  T
Q  252 tgttga 257  Q
    ||||||    
T  33076079 tgttga 33076084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 46042108 - 46042003
Alignment:
Q  152 gggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtt 251  Q
    |||||| ||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46042108 gggggatttctatggtacacccgtgaattacgatgtaccggtactctcgtttataatttttataaattaactatcattttttatgaagaaaataggtgtt 46042009  T
Q  252 tgttga 257  Q
    ||||||    
T  46042008 tgttga 46042003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 30539966 - 30539862
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  30539966 ggggacttctatggtacacccgtaaattacggtgtactggtactctcgcttataatttttataaattaactatcattttttatgaaaaaaataggtgttt 30539867  T
Q  253 gttga 257  Q
    |||||    
T  30539866 gttga 30539862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 47302382 - 47302282
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47302382 acttctacggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 47302283  T
Q  257 a 257  Q
    |    
T  47302282 a 47302282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 52589478 - 52589374
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  52589478 ggggacttctatggtacactcgtaaattacggtgtaccgatactcttgtttataatttttataaattaactataattttttatgaagaaaataggtgttt 52589379  T
Q  253 gttga 257  Q
     ||||    
T  52589378 attga 52589374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 3716708 - 3716627
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3716708 aaattacggtgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttga 3716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 27539324 - 27539219
Alignment:
Q  152 gggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtt 251  Q
    |||||| ||||||| |||| |||||||||| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  27539324 gggggatttctatggtacatccgtaaattatggtgtaccggtactcttgcttataatttttataaattaactataattttttatgaagaaaataggtgtt 27539225  T
Q  252 tgttga 257  Q
    ||||||    
T  27539224 tgttga 27539219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 43137371 - 43137475
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  43137371 ggggacttctatggtacacccgtgaattacggtgtatcggtactctcacttacaattttaataaattaactatcattttttgtaaagaaaataggtgttt 43137470  T
Q  253 gttga 257  Q
    |||||    
T  43137471 gttga 43137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 37518969 - 37519069
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||||||||||| || || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37518969 acttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgtttgttg 37519068  T
Q  257 a 257  Q
    |    
T  37519069 a 37519069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 37523185 - 37523285
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||||||||||| || || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37523185 acttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgtttgttg 37523284  T
Q  257 a 257  Q
    |    
T  37523285 a 37523285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 48578911 - 48579010
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  48578911 acttctacggtacacccgtaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 48579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 52592195 - 52592095
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||| |||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  52592195 acttctacggtacatccgtaaattacggtgtaccggtactctcgcatacaatttttataaagtaattatcattttttatgaagaaaataagtgtttgttg 52592096  T
Q  257 a 257  Q
    |    
T  52592095 a 52592095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 30343230 - 30343129
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30343230 acttctacggtacacccgcaaattacggtttaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 30343131  T
Q  256 ga 257  Q
    ||    
T  30343130 ga 30343129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 41759663 - 41759762
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  41759663 acttctacggtacacccgtaaattaaagtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 41759761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 55722869 - 55722780
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  55722869 tacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttga 55722780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 37855524 - 37855423
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||| | |||||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  37855524 acttctacggtacatctgtaaattaaggtgtaccggtaccctcgcttacaatttttataaattaactgtcattttttatgaaagaaaataagtgtttgtt 37855425  T
Q  256 ga 257  Q
    ||    
T  37855424 ga 37855423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 51435816 - 51435917
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||||| |||||||| |||||| |||||||||| |||||| |||||| ||||| |||||||||||||| |||||||||||  |||||||||||||||    
T  51435816 acttctatggtacacccgcaaattaaggtgtaccggaactctcatttacattttttttaaattaactatcatttttttatgaaagaaataggtgtttgtt 51435915  T
Q  256 ga 257  Q
    ||    
T  51435916 ga 51435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 38836252 - 38836152
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | ||||||||||||| ||||||||||| |||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||    
T  38836252 acttctacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttgtaaattaattataattttttatgaaaaaaataggtgtttgttg 38836153  T
Q  257 a 257  Q
    |    
T  38836152 a 38836152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 11109600 - 11109702
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatg-aagaaaataggtgtttgt 254  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||| | |||||||    
T  11109600 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaaaatttttataaattaactatcatttttttatgaaagaaaattgatgtttgt 11109699  T
Q  255 tga 257  Q
    |||    
T  11109700 tga 11109702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 14803084 - 14803014
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14803084 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttga 14803014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 53388850 - 53388950
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||||| |||| | | |||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||  |||||||||||||||    
T  53388850 acttctatggtacatctgcaaattaaggtgtaccggtactctcgtttac-atttttataaattaaccatcatttttttatgaaagaaataggtgtttgtt 53388948  T
Q  256 ga 257  Q
    ||    
T  53388949 ga 53388950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 28038087 - 28037987
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  28038087 acttctacggtacacccacaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcatttttttatgaaagaaataggtttttgtt 28037989  T
Q  256 ga 257  Q
    ||    
T  28037988 ga 28037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 43147843 - 43147803
Alignment:
Q  206 aatttttataaattaactatcattttttatgaagaaaatag 246  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  43147843 aatttttataaattaacgatcattttttatgtagtaaatag 43147803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 18642275 - 18642171
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18642275 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgttt 18642176  T
Q  253 gttga 257  Q
    |||||    
T  18642175 gttga 18642171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 39971269 - 39971373
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39971269 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggttttt 39971368  T
Q  253 gttga 257  Q
    |||||    
T  39971369 gttga 39971373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 45424021 - 45423917
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45424021 ggggacttctatggtacacccgtaaattacgatgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 45423922  T
Q  253 gttga 257  Q
    |||||    
T  45423921 gttga 45423917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 23459549 - 23459653
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23459549 ggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 23459648  T
Q  253 gttga 257  Q
    |||||    
T  23459649 gttga 23459653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 39190563 - 39190667
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39190563 ggggacttctatggtacaccagtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 39190662  T
Q  253 gttga 257  Q
    |||||    
T  39190663 gttga 39190667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 45673722 - 45673619
Alignment:
Q  154 gggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttg 253  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45673722 gggacttctatggtacatccgtaaattacggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaagaaaataggtgtttg 45673623  T
Q  254 ttga 257  Q
    ||||    
T  45673622 ttga 45673619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 46770731 - 46770835
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46770731 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 46770830  T
Q  253 gttga 257  Q
    |||||    
T  46770831 gttga 46770835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 51520217 - 51520116
Alignment:
Q  156 gacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 255  Q
    |||||||||| |||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520217 gacttctatggtacacccgtaaattacggggtaccggtactctcactttcaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 51520118  T
Q  256 ga 257  Q
    ||    
T  51520117 ga 51520116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 8461531 - 8461631
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8461531 acttctatggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaattggtgtttgttg 8461630  T
Q  257 a 257  Q
    |    
T  8461631 a 8461631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 38262134 - 38262237
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||| ||||||| |||||||||| ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38262134 ggggatttctatggtacacccgtagattacggtgtatcg-tactctcgcttacaatttttataaattaattatcattttttatgaagaaaataggtgttt 38262232  T
Q  253 gttga 257  Q
    |||||    
T  38262233 gttga 38262237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 51985337 - 51985237
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  51985337 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattctttatgaagaaaataggtgtttgttg 51985238  T
Q  257 a 257  Q
    |    
T  51985237 a 51985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 43306921 - 43306835
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  43306921 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactat-aatttttatgaagaaaataggcgtttgttga 43306835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 50905964 - 50905881
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  50905964 gtaaattacggtgtaccggtactctcgcttacaatttttataaattaaatataattttttatgaagaaaataggtgtttgttga 50905881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 23057103 - 23057002
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23057103 acttctacggtacacccgcaaattaaggtgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 23057004  T
Q  256 ga 257  Q
    ||    
T  23057003 ga 23057002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 23061404 - 23061303
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  23061404 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaattatcattttttatgaaagaaaataggtgtttgtt 23061305  T
Q  256 ga 257  Q
    ||    
T  23061304 ga 23061303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 35305554 - 35305453
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  35305554 acttctacggtacactcgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 35305455  T
Q  256 ga 257  Q
    ||    
T  35305454 ga 35305453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 37499144 - 37499045
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  37499144 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 37499046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 6520009 - 6520091
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6520009 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 6520091  T

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Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 921846 - 921946
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  921846 acttctatggtacacctgcaaattaaggtgtaccggtactctcgtt-acaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 921944  T
Q  256 ga 257  Q
    ||    
T  921945 ga 921946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 51369710 - 51369619
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  51369710 tacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactattattttttatgaaagaaaataggtgtttgttga 51369619  T

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Target: chr1; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 5956530 - 5956631
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||  |||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5956530 acttctacggtacacccacaaattaagctgtaccggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 5956629  T
Q  256 ga 257  Q
    ||    
T  5956630 ga 5956631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 26102477 - 26102577
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | ||||||  ||||||||||||||||| || |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  26102477 acttctacggtacacctctaaattacggtgtaccgatattctcatttacgatttttataaattaactataattttttatgaagaaaataggtgtttcttg 26102576  T
Q  257 a 257  Q
    |    
T  26102577 a 26102577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 28494162 - 28494073
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||| |||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  28494162 tacacccgcaaattaaggtgtaccggtactcttgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttga 28494073  T

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Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 52303396 - 52303315
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52303396 aaattaaggtgtaccggtactctcacttaca-tttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 52303315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 29106408 - 29106468
Alignment:
Q  196 tctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  29106408 tctcgcttacaatttttataaattaactat-attttttatgaagaaaatatgtgtttgttga 29106468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 16482926 - 16482878
Alignment:
Q  209 ttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16482926 ttttataaattaactataattttttatgaagaaaataggtgtttgttga 16482878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 24381695 - 24381647
Alignment:
Q  184 gtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||||||||||||||||   | |||||||||||||| |||||||||    
T  24381695 gtgtaccggtactctcgtttcataattttataaattaacgatcattttt 24381647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 42427568 - 42427672
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42427568 ggggacttctatggtacacccgtaaattacggtgtaccgatactcttgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 42427667  T
Q  253 gttga 257  Q
    |||||    
T  42427668 gttga 42427672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 3383195 - 3383296
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3383195 acttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 3383294  T
Q  256 ga 257  Q
    ||    
T  3383295 ga 3383296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 15771314 - 15771413
Alignment:
Q  158 cttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||| | ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  15771314 cttctacggtacacccgtaaattaaggtgtaccggtactctcgcttataatttttataaattaactatcattttttataaagaaaataagtgtttgttga 15771413  T

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Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 14532828 - 14532926
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14532828 acttctacggtacacccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcattttttatgaagaaaataggtgtttgtt 14532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 4673605 - 4673706
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4673605 acttctaaggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 4673704  T
Q  256 ga 257  Q
    ||    
T  4673705 ga 4673706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 6884547 - 6884463
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6884547 gtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 6884463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 11813206 - 11813297
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    |||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11813206 tacacccacaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgttga 11813297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 33423047 - 33423138
Alignment:
Q  166 atacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  33423047 atacatccgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttaatgaaaaaaatagctgtttgttga 33423138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 37083613 - 37083512
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||| ||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37083613 acttctacggtacatccgcaaattaaggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 37083514  T
Q  256 ga 257  Q
    ||    
T  37083513 ga 37083512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 59292 - 59220
Alignment:
Q  185 tgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  59292 tgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttga 59220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 3810454 - 3810554
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| || ||||||  |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  3810454 acttctacgacacacccacaaattaaggtgtaccggtactttcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttttttg 3810553  T
Q  257 a 257  Q
    |    
T  3810554 a 3810554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 34665972 - 34665873
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  34665972 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactattattttttatgaaagaaataggtgtttgttg 34665874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 1353908 - 1353809
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| |||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  1353908 acttctacggtacacccgcaaattaaggtgtaccagtactctcgcttaca-tttttataaattaactataattttttatgaaagaaataggtgtttgttg 1353810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 5389206 - 5389305
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  5389206 acttctacggtacacccgcaaattaaggtgtaccggcactctcgcttaca-tttttataaattaactatcattttttatgaaagaaatatgtgtttgttg 5389304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 11228029 - 11227930
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | |||||| |||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  11228029 acttctacggtacacctgcaaattaaggtgtatcagtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 11227931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 38963071 - 38963172
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca--ttttttatgaagaaaataggtgtttgt 254  Q
    ||||||| | |||||| | |||||| |||| ||||||||||||| ||||| ||||||||||||||||||||  |||||||| ||  ||||||||||||||    
T  38963071 acttctacgttacacctgcaaattaaggtgcaccggtactctcgcttaca-tttttataaattaactatcattttttttataaaagaaataggtgtttgt 38963169  T
Q  255 tga 257  Q
    |||    
T  38963170 tga 38963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 14498304 - 14498408
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14498304 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 14498403  T
Q  253 gttga 257  Q
    |||||    
T  14498404 gttga 14498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 38502595 - 38502493
Alignment:
Q  154 gggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttg 253  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38502595 gggacttctatggtacacccgtaaattacggtgtatcggtattctcgcttacaatttttataaattaactatcat-ttttatgaagaaaataggtgtttg 38502497  T
Q  254 ttga 257  Q
    ||||    
T  38502496 ttga 38502493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 10280960 - 10280862
Alignment:
Q  159 ttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10280960 ttctatggtacacccgtgaattacggtgtatcggtactctcgtttataatttttataaattaattatcattttttatgaagaaaataggtgtttgttga 10280862  T

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Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 29229181 - 29229281
Alignment:
Q  158 cttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgttg 256  Q
    |||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29229181 cttctacggtacacccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcacttttttatgaagaaaataggtgtttgttg 29229280  T
Q  257 a 257  Q
    |    
T  29229281 a 29229281  T

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Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 157 - 257
Target Start/End: Original strand, 15725894 - 15725994
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15725894 acttctacggtacacctgcaaattacggtgtaccgatactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgttg 15725993  T
Q  257 a 257  Q
    |    
T  15725994 a 15725994  T

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Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 36002765 - 36002661
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 252  Q
    ||||||||||||| |||| | |||||||||||||   | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36002765 ggggacttctatggtacatctgtaaattacggtgcttcagtactctcgtttacaatttttataaattaactattattttttatgaagaaaataggtgttt 36002666  T
Q  253 gttga 257  Q
    |||||    
T  36002665 gttga 36002661  T

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Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 23275026 - 23274925
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccgg-tactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  23275026 acttctacgatacacccgcaaattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgtttttt 23274927  T
Q  256 ga 257  Q
    ||    
T  23274926 ga 23274925  T

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Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 29460037 - 29459936
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29460037 acttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 29459938  T
Q  256 ga 257  Q
    ||    
T  29459937 ga 29459936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 946373 - 946271
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt--ttttatgaagaaaataggtgtttgt 254  Q
    ||||||| | |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  946373 acttctacggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttttatgaagaaaataagtgtttgt 946274  T
Q  255 tga 257  Q
    |||    
T  946273 tga 946271  T

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Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 37511491 - 37511390
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttttta-tgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||    
T  37511491 acttctacggtacatccgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttattaaagaaaattggtgtttgtt 37511392  T
Q  256 ga 257  Q
    ||    
T  37511391 ga 37511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 34332513 - 34332414
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34332513 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 34332415  T

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Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 12162957 - 12163045
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgttga 257  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12162957 acccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgttga 12163045  T

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Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 12407385 - 12407473
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgttga 257  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12407385 acccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgttga 12407473  T

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Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 44935300 - 44935201
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  44935300 acttctacggtacacccgcaatttaaggtgtaccggtactctcggttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 44935202  T

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Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 37161916 - 37161810
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtac------tctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgt 250  Q
    ||||||||| |||| ||||||||||||||||||| ||||      ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  37161916 acttctatggtacatccgtaaattacggtgtaccagtaccagtactctcgcttataatttttataaattaactataattttttatgaagaaaataggtgt 37161817  T
Q  251 ttgttga 257  Q
    |||||||    
T  37161816 ttgttga 37161810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 23275173 - 23275092
Alignment:
Q  177 aattacggtgtaccgg-tactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  23275173 aattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttttttga 23275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 28090592 - 28090493
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||| |||||||||    
T  28090592 acttctacggtacacccgcaatttaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaatagatgtttgttg 28090494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 29773846 - 29773747
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| || ||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  29773846 acttctacggtacacccgcaatttaaggtgtaccggtactttcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 29773748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 39171002 - 39171103
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaatta---actatcattttttatgaagaaaataggtgtttg 253  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||   ||||||||||||||||||  |||||||||||||    
T  39171002 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactactatcattttttatgaaagaaataggtgtttg 39171100  T
Q  254 ttg 256  Q
    |||    
T  39171101 ttg 39171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 23286967 - 23286867
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaagaaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  ||||| |||||| ||    
T  23286967 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaagaaataagtgtttatt 23286869  T
Q  256 ga 257  Q
    ||    
T  23286868 ga 23286867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 39171105 - 39171185
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttga 257  Q
    |||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  39171105 aaattaaggtgtaccagtactctcgcttaca-tttttataaattaactatcattttttataaaagaaataggtgtttgttga 39171185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 29265619 - 29265674
Alignment:
Q  183 ggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaa 238  Q
    |||||||||||||||| ||||   | |||||||||||||| |||||||||||||||    
T  29265619 ggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatgaa 29265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 48411 - 48312
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  48411 acttctacggtacacccgcaatttaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgttg 48313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 36643 - 36713
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aagaaaataggtgtttgttga 257  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  36643 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgttga 36713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 6640 - 6541
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgttg 256  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| |||| |||||||||||| |  || ||||  ||||||   ||||||||||||||||    
T  6640 acttctacggtacacccgcaatttaaggtgtaccggtactctcggttac-atttttataaatcacttaccattccttatgacagaaataggtgtttgttg 6542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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