View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_low_89 (Length: 244)
Name: NF0914_low_89
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_low_89 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 47067620 - 47067462
Alignment:
| Q |
20 |
aaatgtcacaaaatatgaattgacatttgcaaaatcttcacccttgtctaagcaatgtctcttctttatctctcttacccttcttcttgttatttacctt |
119 |
Q |
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| T |
47067620 |
aaatgtcacaaaatatgaattgacatttgcaaaatcttcacccttgtctaagcaatgtctcttctttatctctcttacccttcttcttgttatttacctt |
47067521 |
T |
|
| Q |
120 |
cacattacttcatgtgcatgagccacaccacttcaccaaatggggtggctgcaatccct |
178 |
Q |
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| T |
47067520 |
cacattacttcatgtgcatgagccacaccacttcaccaaatggggtggctgcaatccct |
47067462 |
T |
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