View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_low_99 (Length: 216)
Name: NF0914_low_99
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_low_99 |
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Alignment Details
Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 32039581 - 32039499
Alignment:
| Q |
12 |
tgttttagacttctgttgtaat--gtttgtaaaatctcttccatctgttctcttcgagtttttcttttcctgtaattatattattgg |
96 |
Q |
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| T |
32039581 |
tgttttagacttctgttgtaatatgtttgtaaaatctcttccatctgttctcttcgtgtt----ttttcctgtaattatattattgg |
32039499 |
T |
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