View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0915_low_10 (Length: 480)

Name: NF0915_low_10
Description: NF0915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0915_low_10
NF0915_low_10
[»] chr5 (44 HSPs)
chr5 (284-480)||(41092992-41093189)
chr5 (30-160)||(41100569-41100696)
chr5 (284-474)||(43394881-43395072)
chr5 (284-480)||(16528945-16529138)
chr5 (294-447)||(7127555-7127708)
chr5 (287-436)||(41092859-41093006)
chr5 (294-474)||(26523089-26523269)
chr5 (284-470)||(35159690-35159875)
chr5 (287-480)||(16528589-16528780)
chr5 (298-441)||(12442115-12442258)
chr5 (284-480)||(16528763-16528962)
chr5 (303-480)||(11313807-11313982)
chr5 (294-447)||(19121903-19122056)
chr5 (284-461)||(11313965-11314144)
chr5 (292-447)||(24351428-24351583)
chr5 (284-390)||(26523269-26523375)
chr5 (284-390)||(16529121-16529227)
chr5 (294-390)||(19122239-19122335)
chr5 (293-480)||(7673142-7673330)
chr5 (297-474)||(13035130-13035310)
chr5 (297-474)||(13105104-13105285)
chr5 (292-436)||(31487052-31487195)
chr5 (293-480)||(35159414-35159602)
chr5 (293-390)||(11313635-11313732)
chr5 (294-398)||(9488075-9488179)
chr5 (291-390)||(16526190-16526290)
chr5 (294-474)||(10409521-10409700)
chr5 (327-447)||(24350875-24350995)
chr5 (293-480)||(26523358-26523547)
chr5 (293-389)||(23138027-23138122)
chr5 (298-447)||(31486792-31486941)
chr5 (294-386)||(16305344-16305434)
chr5 (321-382)||(24326548-24326609)
chr5 (321-382)||(24350732-24350793)
chr5 (321-382)||(24351286-24351347)
chr5 (293-474)||(38004597-38004774)
chr5 (327-480)||(43395055-43395207)
chr5 (298-390)||(14166196-14166289)
chr5 (287-341)||(7673102-7673156)
chr5 (409-461)||(16528532-16528584)
chr5 (298-341)||(38268880-38268923)
chr5 (409-447)||(9487798-9487836)
chr5 (290-339)||(14854324-14854373)
chr5 (293-346)||(22431580-22431633)
[»] chr4 (53 HSPs)
chr4 (297-480)||(47631359-47631542)
chr4 (284-480)||(48076354-48076548)
chr4 (285-474)||(36639332-36639522)
chr4 (294-474)||(24049561-24049740)
chr4 (291-478)||(48076183-48076369)
chr4 (292-474)||(52689549-52689730)
chr4 (293-441)||(28379725-28379872)
chr4 (295-447)||(36639169-36639321)
chr4 (293-474)||(47768947-47769129)
chr4 (284-398)||(43161746-43161860)
chr4 (297-480)||(21585481-21585663)
chr4 (287-390)||(47631528-47631630)
chr4 (295-447)||(54653606-54653758)
chr4 (293-436)||(7821514-7821657)
chr4 (293-474)||(8397675-8397853)
chr4 (296-474)||(7821301-7821478)
chr4 (294-398)||(53144851-53144955)
chr4 (297-474)||(12796048-12796227)
chr4 (295-474)||(23952434-23952613)
chr4 (293-474)||(22292893-22293070)
chr4 (297-480)||(23952706-23952887)
chr4 (293-390)||(28379986-28380082)
chr4 (293-390)||(44500667-44500764)
chr4 (292-396)||(7796779-7796883)
chr4 (284-390)||(48076531-48076637)
chr4 (298-436)||(2177264-2177402)
chr4 (298-436)||(4941678-4941816)
chr4 (329-474)||(21581206-21581351)
chr4 (293-447)||(28813220-28813374)
chr4 (298-424)||(7809348-7809474)
chr4 (309-435)||(8118608-8118734)
chr4 (292-398)||(8118377-8118481)
chr4 (296-390)||(29967177-29967271)
chr4 (298-442)||(2481613-2481754)
chr4 (308-390)||(22292701-22292783)
chr4 (298-390)||(28389785-28389877)
chr4 (327-474)||(7809561-7809708)
chr4 (295-390)||(8079295-8079387)
chr4 (291-356)||(24046058-24046123)
chr4 (291-369)||(15456285-15456363)
chr4 (291-369)||(15463669-15463747)
chr4 (348-474)||(8479075-8479198)
chr4 (352-474)||(24049337-24049459)
chr4 (298-386)||(32010701-32010789)
chr4 (326-390)||(43161939-43162003)
chr4 (361-398)||(41852151-41852188)
chr4 (284-315)||(21585467-21585498)
chr4 (409-447)||(28380144-28380182)
chr4 (297-346)||(2526940-2526989)
chr4 (298-390)||(8079018-8079111)
chr4 (412-480)||(43161843-43161914)
chr4 (321-447)||(47428372-47428498)
chr4 (287-339)||(47428306-47428358)
[»] chr3 (39 HSPs)
chr3 (284-473)||(46451456-46451643)
chr3 (295-474)||(18094953-18095132)
chr3 (302-474)||(37760501-37760673)
chr3 (295-447)||(47503010-47503162)
chr3 (294-480)||(11454201-11454384)
chr3 (294-474)||(36643057-36643237)
chr3 (293-396)||(38887373-38887476)
chr3 (293-436)||(837171-837314)
chr3 (284-480)||(11454367-11454565)
chr3 (293-447)||(40050845-40050998)
chr3 (284-390)||(11454548-11454655)
chr3 (298-474)||(35560101-35560280)
chr3 (293-398)||(43017266-43017371)
chr3 (294-390)||(18094737-18094833)
chr3 (298-447)||(53047545-53047693)
chr3 (292-447)||(47503183-47503339)
chr3 (293-474)||(11522527-11522709)
chr3 (297-447)||(20877173-20877323)
chr3 (293-390)||(38887592-38887691)
chr3 (294-390)||(38887809-38887905)
chr3 (292-398)||(45514425-45514530)
chr3 (302-387)||(47519871-47519956)
chr3 (294-390)||(16015264-16015360)
chr3 (292-398)||(24365735-24365834)
chr3 (294-390)||(11453933-11454030)
chr3 (335-439)||(46451320-46451425)
chr3 (327-387)||(47519955-47520015)
chr3 (328-390)||(51654074-51654136)
chr3 (300-442)||(43819330-43819472)
chr3 (301-447)||(11220780-11220925)
chr3 (353-391)||(54274787-54274825)
chr3 (294-441)||(3847821-3847960)
chr3 (284-341)||(46451238-46451295)
chr3 (326-398)||(850960-851032)
chr3 (294-480)||(46451074-46451255)
chr3 (292-447)||(21968965-21969118)
chr3 (292-447)||(21991401-21991554)
chr3 (334-437)||(52300747-52300850)
chr3 (409-442)||(20876974-20877007)
[»] chr7 (52 HSPs)
chr7 (294-480)||(9142063-9142242)
chr7 (293-447)||(23591370-23591524)
chr7 (294-474)||(18486630-18486808)
chr7 (294-474)||(4680828-4681005)
chr7 (291-398)||(9141966-9142073)
chr7 (292-474)||(27716461-27716642)
chr7 (296-474)||(45419565-45419743)
chr7 (293-442)||(48640761-48640911)
chr7 (294-447)||(12140817-12140970)
chr7 (294-474)||(40450031-40450210)
chr7 (293-441)||(11649971-11650118)
chr7 (284-447)||(48640972-48641135)
chr7 (298-447)||(16671605-16671754)
chr7 (298-447)||(17645973-17646122)
chr7 (294-474)||(23591560-23591740)
chr7 (292-447)||(22324278-22324433)
chr7 (298-447)||(2526909-2527059)
chr7 (292-396)||(11645938-11646042)
chr7 (291-447)||(11646353-11646509)
chr7 (291-390)||(27716322-27716421)
chr7 (299-474)||(45419771-45419947)
chr7 (294-433)||(16492515-16492653)
chr7 (327-442)||(18487180-18487295)
chr7 (293-398)||(21224133-21224238)
chr7 (293-474)||(16671241-16671422)
chr7 (293-474)||(17645609-17645790)
chr7 (292-398)||(22773916-22774021)
chr7 (294-436)||(35124721-35124863)
chr7 (290-390)||(2354678-2354778)
chr7 (292-474)||(2853143-2853329)
chr7 (297-448)||(34837441-34837591)
chr7 (291-376)||(11646620-11646705)
chr7 (294-390)||(34837183-34837280)
chr7 (298-398)||(48641447-48641546)
chr7 (294-381)||(32278158-32278245)
chr7 (293-390)||(19222100-19222198)
chr7 (300-447)||(11646166-11646312)
chr7 (294-390)||(46264296-46264393)
chr7 (321-386)||(4681162-4681227)
chr7 (294-390)||(21128036-21128132)
chr7 (291-390)||(30991452-30991552)
chr7 (321-398)||(1566513-1566591)
chr7 (305-474)||(16362620-16362788)
chr7 (330-390)||(43059223-43059283)
chr7 (297-398)||(4681603-4681700)
chr7 (293-364)||(23591238-23591309)
chr7 (292-390)||(4454918-4455016)
chr7 (352-390)||(40686905-40686943)
chr7 (293-341)||(34837383-34837431)
chr7 (293-341)||(34837650-34837698)
chr7 (409-474)||(27712564-27712630)
chr7 (294-339)||(4455363-4455408)
[»] chr2 (41 HSPs)
chr2 (293-442)||(28612195-28612344)
chr2 (325-480)||(5001624-5001778)
chr2 (293-472)||(44256468-44256647)
chr2 (297-447)||(28611978-28612128)
chr2 (291-436)||(11735903-11736047)
chr2 (292-447)||(41995710-41995865)
chr2 (287-480)||(5001447-5001638)
chr2 (293-447)||(28611765-28611919)
chr2 (293-447)||(28612614-28612766)
chr2 (295-447)||(10129454-10129606)
chr2 (293-447)||(28612403-28612556)
chr2 (292-474)||(6348066-6348246)
chr2 (284-471)||(29550119-29550311)
chr2 (294-474)||(37131418-37131597)
chr2 (284-386)||(44543733-44543835)
chr2 (292-389)||(627531-627628)
chr2 (284-390)||(29549944-29550050)
chr2 (343-480)||(6347938-6348075)
chr2 (294-447)||(28612825-28612979)
chr2 (294-447)||(3249756-3249909)
chr2 (348-480)||(5001296-5001430)
chr2 (326-447)||(11736329-11736450)
chr2 (299-390)||(5013210-5013301)
chr2 (292-436)||(29549785-29549929)
chr2 (293-436)||(3249550-3249693)
chr2 (301-436)||(41326372-41326507)
chr2 (348-480)||(5012966-5013100)
chr2 (294-390)||(12898019-12898115)
chr2 (351-447)||(627629-627725)
chr2 (372-480)||(44543606-44543714)
chr2 (293-386)||(44543944-44544037)
chr2 (297-386)||(12896444-12896533)
chr2 (297-369)||(2132238-2132310)
chr2 (361-442)||(20708899-20708980)
chr2 (329-474)||(11657483-11657623)
chr2 (284-333)||(44543574-44543623)
chr2 (284-329)||(5001268-5001313)
chr2 (284-329)||(5012938-5012983)
chr2 (284-312)||(5001436-5001464)
chr2 (284-312)||(5013106-5013134)
chr2 (409-480)||(5013117-5013186)
[»] chr1 (51 HSPs)
chr1 (294-474)||(318551-318730)
chr1 (284-480)||(51113892-51114093)
chr1 (284-480)||(42497214-42497411)
chr1 (292-474)||(5428522-5428704)
chr1 (295-474)||(1155991-1156174)
chr1 (292-474)||(1647537-1647719)
chr1 (291-474)||(42492089-42492278)
chr1 (298-474)||(21617756-21617931)
chr1 (294-474)||(38684011-38684194)
chr1 (294-480)||(51113719-51113909)
chr1 (297-447)||(44263088-44263238)
chr1 (287-474)||(27296326-27296510)
chr1 (293-436)||(16165653-16165797)
chr1 (284-390)||(51114076-51114182)
chr1 (293-474)||(3227153-3227333)
chr1 (294-480)||(27296158-27296340)
chr1 (291-390)||(44263303-44263402)
chr1 (284-390)||(42496947-42497053)
chr1 (284-390)||(5428919-5429025)
chr1 (296-386)||(51272510-51272600)
chr1 (294-447)||(52740696-52740850)
chr1 (294-390)||(5429044-5429144)
chr1 (284-375)||(28950016-28950107)
chr1 (300-480)||(28950090-28950274)
chr1 (327-474)||(44099602-44099747)
chr1 (293-390)||(44262659-44262756)
chr1 (295-386)||(28950277-28950368)
chr1 (306-447)||(4100749-4100890)
chr1 (302-390)||(6537669-6537757)
chr1 (352-474)||(12115359-12115482)
chr1 (297-447)||(18912326-18912477)
chr1 (297-480)||(42497394-42497575)
chr1 (299-448)||(4100543-4100691)
chr1 (287-386)||(24595224-24595316)
chr1 (326-480)||(24595086-24595238)
chr1 (295-389)||(33375627-33375721)
chr1 (284-382)||(42497133-42497231)
chr1 (300-396)||(28949900-28949995)
chr1 (330-442)||(52584966-52585078)
chr1 (298-398)||(18912215-18912316)
chr1 (293-442)||(43761941-43762091)
chr1 (293-369)||(6537465-6537541)
chr1 (349-474)||(45417531-45417655)
chr1 (293-383)||(30083973-30084064)
chr1 (409-480)||(42492332-42492403)
chr1 (409-474)||(24595324-24595388)
chr1 (284-353)||(42492280-42492349)
chr1 (294-338)||(47790692-47790736)
chr1 (297-338)||(52740914-52740955)
chr1 (410-474)||(21618069-21618133)
chr1 (294-346)||(48552993-48553045)
[»] chr6 (27 HSPs)
chr6 (296-474)||(25068186-25068366)
chr6 (294-480)||(25067958-25068143)
chr6 (291-447)||(17202843-17202999)
chr6 (292-447)||(17201591-17201746)
chr6 (294-442)||(17906763-17906910)
chr6 (298-474)||(9828919-9829096)
chr6 (287-395)||(23622207-23622315)
chr6 (294-390)||(27579594-27579690)
chr6 (292-436)||(23610426-23610570)
chr6 (294-442)||(4811023-4811172)
chr6 (287-390)||(32208421-32208524)
chr6 (298-398)||(808829-808930)
chr6 (294-435)||(26832485-26832626)
chr6 (298-390)||(27315287-27315378)
chr6 (294-461)||(4100258-4100428)
chr6 (294-382)||(808468-808556)
chr6 (348-447)||(17202681-17202780)
chr6 (294-447)||(17199982-17200134)
chr6 (293-364)||(29201553-29201624)
chr6 (297-390)||(15130898-15130991)
chr6 (284-341)||(25068126-25068183)
chr6 (294-341)||(4125712-4125759)
chr6 (291-339)||(17201809-17201857)
chr6 (292-355)||(808687-808749)
chr6 (293-339)||(24223222-24223268)
chr6 (373-447)||(29201621-29201695)
chr6 (294-390)||(17080031-17080127)
[»] chr8 (52 HSPs)
chr8 (293-474)||(1197873-1198053)
chr8 (292-480)||(37198223-37198410)
chr8 (294-390)||(23830959-23831055)
chr8 (291-474)||(23960509-23960694)
chr8 (284-480)||(37197831-37198032)
chr8 (293-447)||(3459092-3459246)
chr8 (293-390)||(13797437-13797534)
chr8 (297-390)||(23828141-23828234)
chr8 (297-436)||(29580007-29580145)
chr8 (300-480)||(39922013-39922192)
chr8 (301-436)||(27853638-27853773)
chr8 (294-436)||(30439011-30439155)
chr8 (298-386)||(23085860-23085948)
chr8 (294-398)||(37410078-37410182)
chr8 (326-447)||(38111372-38111493)
chr8 (294-398)||(32062811-32062917)
chr8 (295-447)||(44429047-44429198)
chr8 (298-390)||(23838356-23838449)
chr8 (294-431)||(40399467-40399604)
chr8 (326-447)||(34947504-34947624)
chr8 (297-390)||(35617680-35617774)
chr8 (294-367)||(23838173-23838246)
chr8 (293-390)||(23960814-23960910)
chr8 (284-441)||(604639-604795)
chr8 (291-386)||(37198131-37198227)
chr8 (292-441)||(33198827-33198975)
chr8 (298-474)||(37197607-37197783)
chr8 (294-442)||(33198599-33198745)
chr8 (284-390)||(44429210-44429316)
chr8 (284-354)||(39921960-39922030)
chr8 (294-398)||(43419036-43419136)
chr8 (284-390)||(44430053-44430159)
chr8 (284-390)||(44433788-44433894)
chr8 (330-390)||(18308259-18308319)
chr8 (284-436)||(44430404-44430557)
chr8 (284-436)||(44433962-44434115)
chr8 (293-436)||(2084871-2085015)
chr8 (284-480)||(44430227-44430421)
chr8 (292-436)||(44433623-44433767)
chr8 (292-390)||(37426110-37426208)
chr8 (284-341)||(37197791-37197848)
chr8 (353-446)||(1276481-1276574)
chr8 (284-368)||(44434139-44434223)
chr8 (284-398)||(604508-604623)
chr8 (294-398)||(42045633-42045737)
chr8 (292-436)||(44429888-44430032)
chr8 (367-474)||(38111190-38111297)
chr8 (284-387)||(604344-604448)
chr8 (294-346)||(34345140-34345192)
chr8 (284-387)||(44429383-44429485)
chr8 (352-438)||(604813-604899)
chr8 (293-341)||(39922229-39922277)
[»] scaffold0018 (1 HSPs)
scaffold0018 (292-474)||(163731-163914)
[»] scaffold0294 (1 HSPs)
scaffold0294 (294-390)||(12399-12495)
[»] scaffold0320 (1 HSPs)
scaffold0320 (294-473)||(14512-14690)
[»] scaffold0240 (2 HSPs)
scaffold0240 (294-480)||(13088-13278)
scaffold0240 (332-436)||(13285-13389)
[»] scaffold0013 (1 HSPs)
scaffold0013 (291-447)||(102698-102852)
[»] scaffold0504 (1 HSPs)
scaffold0504 (297-386)||(1551-1641)
[»] scaffold0097 (1 HSPs)
scaffold0097 (361-442)||(12735-12816)
[»] scaffold1155 (1 HSPs)
scaffold1155 (284-390)||(958-1068)
[»] scaffold0345 (1 HSPs)
scaffold0345 (284-390)||(9149-9259)
[»] scaffold0105 (1 HSPs)
scaffold0105 (284-390)||(29721-29831)
[»] scaffold0432 (1 HSPs)
scaffold0432 (293-341)||(5372-5420)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 5e-63; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 284 - 480
Target Start/End: Complemental strand, 41093189 - 41092992
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41093189 ttctacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacc 41093090  T
Q  384 taacaaa--cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||||  |||| |         || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  41093089 taacaaattcttcct-aaaaaaaatgcatcgcaccaatttcatttttatcctcttgcctttattttgttgaagaaaatattttatacacttatccttat 41092992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 41100696 - 41100569
Alignment:
Q  30 aaaaagcgaagacgcgggagataattatgcagtactactgtactgccagtcagtagagtagtttcctaacaataaaattaaataaatcaagaagtaaaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   |||| ||||    
T  41100696 aaaaagcgaagacgcgggagataattatgcagtactactgtactgccagtcagtagagtagtttgctaacaataaaattaaataaatc---aagttaaaa 41100600  T
Q  130 tatgttttatctctataaataatatttttta 160  Q
    |||||||||||||||||||||||||||||||    
T  41100599 tatgttttatctctataaataatatttttta 41100569  T

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Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 284 - 474
Target Start/End: Complemental strand, 43395072 - 43394881
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43395072 ttctacacttatccttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacc 43394974  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||| |||||||       || |||||||||||||||||| ||||||||| ||  ||| |||| |||| |||||||| || |||||||||    
T  43394973 taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttttttttgacgaaaatattttctacacttat 43394881  T

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Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 16528945 - 16529138
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  16528945 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt--tcctgctcatttgccttattaggtttgcaattatttaacc 16529042  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||||||| || ||||       |  |||||||||||||||||| |||||| || ||||| |||| || |||||||||| || |||||||||||||||    
T  16529043 taacaaatttaatctaaaaaaattcatcgcaccaatttcattcatatccttttgccttt-ttttttttaagaaaatattttctacacttatccttat 16529138  T

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Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 7127555 - 7127708
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |     
T  7127555 atccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaattc 7127654  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||       ||||||||||||||||||||| ||||||||| | ||||||||    
T  7127655 catctaaaaaaatgtatcgcaccaatttcattcctatcctcttgcttttatttt 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 287 - 436
Target Start/End: Complemental strand, 41093006 - 41092859
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  41093006 tacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaa 41092908  T
Q  387 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |||| |||||||       || ||| | |||||||||||| |||||||||    
T  41092907 caaa-ttcatctaaaaaaatgcatcaccccaatttcattcctatcctctt 41092859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 26523269 - 26523089
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||| | |||||||| |     
T  26523269 atccttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattc 26523170  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||  ||||||||||||| || |||| ||||    
T  26523169 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttgtttgaagaaaatattttctacatttat 26523089  T

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Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 470
Target Start/End: Original strand, 35159690 - 35159875
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  35159690 ttctacatttatccttatttattaattttgttacgtctgcagcaatttaacctatttt-ttcccgctcatttgctttattaggtttgcaattatttaacc 35159788  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacac 470  Q
    ||||||| || ||||       || |||||||||||||||||| ||| ||||  | ||| |||| ||||||||||||| || |||||    
T  35159789 taacaaattttatctaaaaaaatgcatcgcaccaatttcattcctattctctgtcttttttttttttgaagaaaatattttctacac 35159875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 287 - 480
Target Start/End: Original strand, 16528589 - 16528780
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||| |||| |||||||||||||||||||  || | || |||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  16528589 tacatttattcttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaa 16528688  T
Q  387 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||| |  ||||       || |||||||||||||||||| ||||||||| || ||||||| ||||||||||||| || |||||||||||||||    
T  16528689 caaattctatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcc-ttatttt-ttgaagaaaatattttctacacttatccttat 16528780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 298 - 441
Target Start/End: Complemental strand, 12442258 - 12442115
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||| |||| ||| |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| | ||||    
T  12442258 ttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 12442159  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
    |       || |||||||||||||||||| ||||||||||||||    
T  12442158 tacaaaaatgcatcgcaccaatttcattcatatcctcttacctt 12442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 16528763 - 16528962
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgg----gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 379  Q
    |||||||||||||||||||||||||||||||| |    || |||| |||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  16528763 ttctacacttatccttatttattaattttgtttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatattt 16528862  T
Q  380 aacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctta 479  Q
    ||||||||||  | |||||       |  |||||||||||||||||| |||||| || ||||| |||| || |||||||||| || ||||||||||||||    
T  16528863 aacctaacaacttccatctaaaaaaattcatcgcaccaatttcattcctatccttttgccttt-ttttttttaagaaaatattttctacacttatcctta 16528961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 11313807 - 11313982
Alignment:
Q  303 tattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnn 402  Q
    |||||||||||||  || |||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||| | |||||        
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  403 nnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
       |||||| |||||||||||||| ||||||||| ||||  |||| || |||||||||| || |||||||||||||||    
T  11313907 aaatgtatcccaccaatttcattcctatcctcttgcctt--ttttttttaagaaaatattttctacacttatccttat 11313982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 19121903 - 19122056
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| |||||||||||||| |     
T  19121903 atccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaaattc 19122002  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  19122003 tatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 19122056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 461
Target Start/End: Original strand, 11313965 - 11314144
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||    
T  11313965 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaac 11314064  T
Q  383 ctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacct-ttattttgttgaagaaaatat 461  Q
    |||| ||| | |||||       || |||||||||||||||||| |||| |||| ||| || |||| || ||||||||||    
T  11314065 ctaaaaaattccatctaaaaaaatgcatcgcaccaatttcattcctatcttcttgcctctttttttttttaagaaaatat 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 447
Target Start/End: Complemental strand, 24351583 - 24351428
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||| || ||| ||||  ||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||     
T  24351583 ttatccttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaat 24351484  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  24351483 ttcatctaaaaaaatgcatcgcaccaatttcattactatcctcttgcctttttttt 24351428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 26523375 - 26523269
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||    
T  26523375 ttctacatttatccttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacc 26523276  T
Q  384 taacaaa 390  Q
    |||||||    
T  26523275 taacaaa 26523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 16529121 - 16529227
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||     
T  16529121 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacg 16529220  T
Q  384 taacaaa 390  Q
    |||||||    
T  16529221 taacaaa 16529227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 19122239 - 19122335
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| ||||||||||||||    
T  19122239 atccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaaa 19122335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 480
Target Start/End: Complemental strand, 7673330 - 7673142
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| || || | ||||||| |||||||||||||||||||||||||||||||||     
T  7673330 tatctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaat 7673231  T
Q  392 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||||        || |||||| ||||||||||| ||| ||| | ||||| |||| || |||||||||| ||||||| ||||||||||    
T  7673230 ttcatctaaaaaaaatgcatcgcatcaatttcattcatattctcctgccttt-tttttttaaagaaaatattttatacatttatccttat 7673142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 297 - 474
Target Start/End: Complemental strand, 13035310 - 13035130
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta----tttaacctaacaaact 392  Q
    ||||||||||||||||||  ||| |||| |||||||| ||||||| || | ||||||| | |||||||||||||||||||    |||||||||||||| |    
T  13035310 cttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13035211  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||       || |||||||||||||||||| ||| ||||| ||||| |||| ||||||||||||| || |||||||||    
T  13035210 tcatctaaaaaaatgcatcgcaccaatttcattcctattctcttgccttt-tttttttgaagaaaatattttctacacttat 13035130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 297 - 474
Target Start/End: Complemental strand, 13105285 - 13105104
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta----tttaacctaacaaact 392  Q
    ||||||||||||||||||  ||| |||| || ||||||||||||| || | ||||||| | |||||||||||||||||||    |||||||||||||| |    
T  13105285 cttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13105186  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||       || |||||||||||||||||| ||||||||| ||||| |||| |  |||||||||| || |||||||||    
T  13105185 tcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgccttttttttttcaaagaaaatattttctacacttat 13105104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 31487195 - 31487052
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||| | |||| ||||||||||| ||||||||| ||| | |||||||||||||||     
T  31487195 ttatccttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaat 31487096  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  31487095 ttcatct-aaaaaatgcatcgcaccaatttcattcctatcctctt 31487052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 480
Target Start/End: Original strand, 35159414 - 35159602
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||| || |    
T  35159414 tatctttatttattaattttgttacgt-tgcaacaatttaacctaattt-ttcccgttcttttgctttattaggtttgcaattatttaacctaaccaatt 35159511  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttatccttat 480  Q
     |||||        || |||||||||||||||||  ||||||||| ||  ||| |||| ||||||||||||| || |||||||||||||||    
T  35159512 ccatctaaaaaaaatgcatcgcaccaatttcatttatatcctcttgcctttttttttttttgaagaaaatattttctacacttatccttat 35159602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 11313635 - 11313732
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||| ||  || | || |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  11313635 tatccttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaa 11313732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 9488179 - 9488075
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | | | |||||||||||||| |||||||||||||||||||||||| ||    
T  9488179 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaattt 9488080  T
Q  394 catct 398  Q
    |||||    
T  9488079 catct 9488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 16526190 - 16526290
Alignment:
Q  291 cttatccttatttattaa-ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    |||||||||||||||||| |||||||  || ||||||||||||||||||||| ||    |||||||||||||||||||||||||||||||||||||||||    
T  16526190 cttatccttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaa 16526289  T
Q  390 a 390  Q
    |    
T  16526290 a 16526290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 474
Target Start/End: Original strand, 10409521 - 10409700
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || | ||  ||||||| ||||||| |||| |||||||| ||| | ||| |||||||||||||||||||||||| ||    
T  10409521 atccttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaattt 10409620  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||| |       || |||||| ||||||||||| ||||||||| ||||| | || ||||||||||||| || |||||||||    
T  10409621 catttaaaaaaatgcatcgcatcaatttcattcatatcctcttgccttt-tctttttgaagaaaatattttctacacttat 10409700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 24350995 - 24350875
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 426  Q
    ||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||       || |||||||||||||||||     
T  24350995 aatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatta 24350896  T
Q  427 ttatcctcttacctttatttt 447  Q
     ||||||||| ||||| ||||    
T  24350895 ctatcctcttgcctttttttt 24350875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 480
Target Start/End: Complemental strand, 26523547 - 26523358
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc---tgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||| ||     ||||||||||||||||||  |||||||||||||||| ||||||    
T  26523547 tatccttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttatta--tttgcaattatttaacataacaa 26523450  T
Q  390 acttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt-attttgttgaagaaaatatgttatacacttatccttat 480  Q
    | |||||||       || ||| || ||||||||||| |||| |||| |||||  |||| ||||||||||||| || |||| ||||||||||    
T  26523449 atttcatctaaaaaaatgcatcacatcaatttcattcctatcatcttgcctttcttttttttgaagaaaatattttctacatttatccttat 26523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 23138027 - 23138122
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    ||||||||||||||||||| ||| ||| |||| || ||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||    
T  23138027 tatccttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaa 23138122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 31486941 - 31486792
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||| || ||| |||| |||||||||||||| | |||| | ||||||||| |||||||||  || | ||||||||||||||| | ||||    
T  31486941 ttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattccatc 31486842  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  31486841 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 31486792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 386
Target Start/End: Original strand, 16305344 - 16305434
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||||| ||| || |  ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||| ||||    
T  16305344 atccttatttattaattttgttaggtttgtaataatttaaactaattt--tcccgctcatttgctttattaggtttgcaattatttaatctaa 16305434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 24326548 - 24326609
Alignment:
Q  321 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24326548 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 24350793 - 24350732
Alignment:
Q  321 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24350793 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 24351347 - 24351286
Alignment:
Q  321 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24351347 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 474
Target Start/End: Complemental strand, 38004774 - 38004597
Alignment:
Q  293 tatccttatttattaattttgttg-ggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||  ||| ||||   ||||||| |||||| || | | |||||||||||| |||||||| |||||||||| |||| |||     
T  38004774 tatccttatttattaattttgttaaggtttgca---atttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaat 38004679  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||       || |||||| ||||||||||| ||||||||| | ||| |||| ||||||||||||| || |||||||||    
T  38004678 ttcatctaaaaaa-tgcatcgcatcaatttcattcatatcctcttgcttttttttttttgaagaaaatattttctacacttat 38004597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 480
Target Start/End: Complemental strand, 43395207 - 43395055
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct--nnnnnnntgtatcgcaccaatttcat 424  Q
    |||||||| | |||| |||| |||||||||||||||||||||| |||||||||||||||||||| | ||| |         || ||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  425 tcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    || |||||||| ||   | |||| || |||||||||| || |||||||||||||||    
T  43395107 tcctatcctctaac---ttttttttttaagaaaatattttctacacttatccttat 43395055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 14166289 - 14166196
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgc-tcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||| ||| ||||  |||||||| |||||| ||  |   ||||||||||||||| |||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaa 14166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 7673156 - 7673102
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    |||| ||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  7673156 tacatttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 7673102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 16528532 - 16528584
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatat 461  Q
    |||||||||||||||||  ||||||||| ||||| |||| |||||||||||||    
T  16528532 atcgcaccaatttcattgctatcctcttgcctttttttttttgaagaaaatat 16528584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 38268880 - 38268923
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaattt 38268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 9487836 - 9487798
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  9487836 atcgcaccaatttcattcttatcctcttgcctttttttt 9487798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 14854324 - 14854373
Alignment:
Q  290 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 339  Q
    ||||||||||||||||||||||| || ||| |||| ||| ||||||||||    
T  14854324 acttatccttatttattaattttattaggtttgcagcaacttaacctaat 14854373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 22431580 - 22431633
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 346  Q
    |||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  22431580 tatccttatttattaattttgttaagtctgcagcaacttaacctaattttttcc 22431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 297 - 480
Target Start/End: Original strand, 47631359 - 47631542
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  47631359 cttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcat 47631458  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||       || |||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||| |||||    
T  47631459 ctaaaaaaatgcatcgcaccaatttcattcttatcctcctgcctttatttttttgaagaaaatattttatacacttattcttat 47631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 48076354 - 48076548
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||| |||||||||||||||  || |||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  48076354 ttctacacttatccttctttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacc 48076453  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||||||| |||||||       || ||||||||||||||||||||||||| || ||||  |||| ||||||||||||| || |||| ||||||||||    
T  48076454 taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcttatccttttgcctt--tttttttgaagaaaatattttctacaattatccttat 48076548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 285 - 474
Target Start/End: Original strand, 36639332 - 36639522
Alignment:
Q  285 tctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacct 384  Q
    ||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||| |||| | |||||| |||||||||| |||||||||||||||||    
T  36639332 tctacacttatccttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacct 36639431  T
Q  385 aacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||| |||||||       ||||||||||||||||| ||| |||||||||||| ||| |||| ||||||||||||| || |||| ||||    
T  36639432 aacaaatttcatctaaaaaaatgtatcgcaccaatttccttcctatcctcttaccttttttttttttgaagaaaatattttctacatttat 36639522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 474
Target Start/End: Original strand, 24049561 - 24049740
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||    
T  24049561 atccttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaattt 24049660  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || ||| |||||||||||||  |||| |||| ||||| |||| |||||| |||||| || |||||||||    
T  24049661 catctaaaaaaatgcatcacaccaatttcatttctatcttcttgccttt-tttttttgaaggaaatattttctacacttat 24049740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 291 - 478
Target Start/End: Original strand, 48076183 - 48076369
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  48076183 cttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 48076282  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctt 478  Q
     | |||||       || |||||||||||||||||||| |||| || ||||| |||| |  |||||||||| || |||||||||||||    
T  48076283 ttccatctaaaaaaatgcatcgcaccaatttcattcttttccttttgccttt-ttttttccaagaaaatattttctacacttatcctt 48076369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 292 - 474
Target Start/End: Complemental strand, 52689730 - 52689549
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||| ||||||||||||||| || ||| ||||| |||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||     
T  52689730 ttatctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaat 52689631  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||       || |||||||||||||||||| ||||||||| ||||| |||| |||||| |||||| || |||||||||    
T  52689630 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttgaaggaaatattttctacacttat 52689549  T

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Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 28379872 - 28379725
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| || |    
T  28379872 tatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aatt 28379774  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
     |||||       || |||||||||| ||||||||||||||||||||||    
T  28379773 ccatctaaaaaaatgcatcgcaccaagttcattcttatcctcttacctt 28379725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 447
Target Start/End: Original strand, 36639169 - 36639321
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    |||||||||||||||||||||  || || | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  36639169 tccttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttc 36639268  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  36639269 atctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 36639321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 47768947 - 47769129
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||||| |    
T  47768947 tatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatt 47769046  T
Q  393 tcatc-tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||| |       || ||| |||||||||||||| ||||||||| ||||| |||| ||||| ||||||| || |||||||||    
T  47769047 tcatcttaaaaaaatgcatcacaccaatttcattcctatcctcttgcctttttttttttgaataaaatattttctacacttat 47769129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 43161860 - 43161746
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||| |||||  || |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  43161860 ttctacacttatccttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacc 43161761  T
Q  384 taacaaacttcatct 398  Q
    ||||||| |||||||    
T  43161760 taacaaatttcatct 43161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 480
Target Start/End: Complemental strand, 21585663 - 21585481
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| || |  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21585663 cttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcat 21585564  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||       ||||||| ||||||||||||| |||||||||  |||| |||| || |||||||||| || |||||||||||||||    
T  21585563 ct-aaaaaatgtatcgtaccaatttcattcctatcctcttgtcttttttttttttaagaaaatattttctacacttatccttat 21585481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 47631528 - 47631630
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  47631528 tacacttattcttatttattaattttgtcaggtctgcatcaatttaacctaatttatt-ctgctcttttgctttattaggtttgcaattatttaacctaa 47631626  T
Q  387 caaa 390  Q
    ||||    
T  47631627 caaa 47631630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 447
Target Start/End: Complemental strand, 54653758 - 54653606
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |      
T  54653758 tccttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattca 54653659  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||       || ||| |||||||||||||| ||||||||| ||||| ||||    
T  54653658 atctaaaaaaatgcatcacaccaatttcattcctatcctcttgcctttttttt 54653606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 436
Target Start/End: Original strand, 7821514 - 7821657
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||  ||| |    
T  7821514 tatccttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatt 7821613  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    ||||||       || |||||||||||||||||| |||||||||    
T  7821614 tcatctaaaaaaatgcatcgcaccaatttcattcctatcctctt 7821657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 474
Target Start/End: Complemental strand, 8397853 - 8397675
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||| |||| ||||||||||||||||||||||||| ||||||| |    
T  8397853 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatt 8397754  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||       || || |||||| |||||||||||| ||||| |||   ||||||| ||| |||||| || |||||||||    
T  8397753 tcatctaaaaaaatgcattgcaccattttcattcttattctcttgcct---ttttgtttaaggaaatattttctacacttat 8397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 296 - 474
Target Start/End: Original strand, 7821301 - 7821478
Alignment:
Q  296 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 395  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||   ||||||||||||||||||| ||| | ||    
T  7821301 ccttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattcca 7821400  T
Q  396 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||       || |||||||||||||||||| ||||||||| ||||| ||||||||||| |||||| || ||| |||||    
T  7821401 tctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-ttttgttgaaggaaatattttctacgcttat 7821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 53144955 - 53144851
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| ||    
T  53144955 atccttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 53144856  T
Q  394 catct 398  Q
    |||||    
T  53144855 catct 53144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 474
Target Start/End: Complemental strand, 12796227 - 12796048
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||| || ||| || | |||||||||||||||| || | ||||||||| |||||||||||||||||||||||| |||||||| | |||    
T  12796227 cttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccat 12796128  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 474  Q
    ||       || |||||||||| ||||||| ||||||||||||  ||| |||| ||||||||||||| || |||||||||    
T  12796127 ctaaaaatatgcatcgcaccaacttcattcatatcctcttacctttttttttttttgaagaaaatattttctacacttat 12796048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 295 - 474
Target Start/End: Complemental strand, 23952613 - 23952434
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||| | |    
T  23952613 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattcc 23952514  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 474  Q
    || |       || |||||||||||||||||| ||||||||| || ||| || | ||||||||||||| || |||||||||    
T  23952513 at-ttaaaaaatgcatcgcaccaatttcattcctatcctcttgccattttttcttttgaagaaaatattttctacacttat 23952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 22292893 - 22293070
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||| | ||| |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  22292893 tatccttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa-t 22292991  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||          || ||||||||||||| |||| ||||||||| |||   |||| ||||||||||||| || |||||||||    
T  22292992 tcaataaaaaaaatgcatcgcaccaattttattcctatcctcttgcct---tttttttgaagaaaatattttctacacttat 22293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 480
Target Start/End: Complemental strand, 23952887 - 23952706
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||| ||||||||||||||||||||||||| ||||||| | |||    
T  23952887 cttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccat 23952788  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||       || ||||| |||||||||||| |||| |||| ||||| |||  ||||||||||||| || |||||||||||||||    
T  23952787 ctaaaaaaatgcatcgcgccaatttcattc-tatcatcttgccttt-tttctttgaagaaaatattttctacacttatccttat 23952706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 28380082 - 28379986
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  28380082 tatccttatttattaattttgttaggtctgcaccaatttaacctaattt-ttcttgctcatttgttttattaggtttgcaattatttaacctaacaaa 28379986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 44500667 - 44500764
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  44500667 tatccttgtttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaa 44500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 7796779 - 7796883
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| ||| |||||||||||||||||||     
T  7796779 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaat 7796878  T
Q  392 ttcat 396  Q
    |||||    
T  7796879 ttcat 7796883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 48076531 - 48076637
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||    
T  48076531 ttctacaattatccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacc 48076630  T
Q  384 taacaaa 390  Q
    |||||||    
T  48076631 taacaaa 48076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 298 - 436
Target Start/End: Original strand, 2177264 - 2177402
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||| |||| | | |||| ||||||||  |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  2177264 ttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaatttcatc 2177363  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |       || |||||||||||||||||| |||||||||    
T  2177364 taaaaacatgcatcgcaccaatttcattcatatcctctt 2177402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 298 - 436
Target Start/End: Original strand, 4941678 - 4941816
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||||||   | | ||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4941678 ttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 4941777  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |       || |||||||||||||||||  |||||||||    
T  4941778 taaaaaaatgcatcgcaccaatttcattgctatcctctt 4941816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 329 - 474
Target Start/End: Complemental strand, 21581351 - 21581206
Alignment:
Q  329 tttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgta-tcgcaccaatttcattct 427  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| |||||||       || | |||||||||||||||||     
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcattcc 21581252  T
Q  428 tatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||| ||||| ||||| |||| |||||||||||||| | |||||||||    
T  21581251 tattctcttgccttt-tttttttgaagaaaatatgatctacacttat 21581206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 447
Target Start/End: Original strand, 28813220 - 28813374
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| | || |||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||| |||||| |    
T  28813220 tatccttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatt 28813318  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||||        || || ||||||||||||||| || |||||||||||| ||||    
T  28813319 tcatctaaaaaaaatgcattgcaccaatttcattcataccctcttacctttttttt 28813374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 424
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||| |||||||||||| ||| |||| ||||| |||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  398 tnnnnnnntgtatcgcaccaatttcat 424  Q
    |       || ||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 8118608 - 8118734
Alignment:
Q  309 ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgt 408  Q
    ||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||| |||||||       ||     
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  409 atcgcaccaatttcattcttatcctct 435  Q
     ||||||||||||||||| ||||||||    
T  8118708 ttcgcaccaatttcattcctatcctct 8118734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 8118377 - 8118481
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||| |||  || |||| ||||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||||     
T  8118377 ttatccttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaat 8118474  T
Q  392 ttcatct 398  Q
    |||||||    
T  8118475 ttcatct 8118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 390
Target Start/End: Original strand, 29967177 - 29967271
Alignment:
Q  296 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||| |||| ||||||||| |||||||| ||||||||||| ||||||||||||    
T  29967177 ccttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaa 29967271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 442
Target Start/End: Complemental strand, 2481754 - 2481613
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    |||| |||||||||||||  || |||| ||| |||||||||||| |||| |||||||||||||||||||||||||   ||||||||||||||| | ||||    
T  2481754 ttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaattccatc 2481658  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |       || |||||||||||||||||| ||||||||| |||||    
T  2481657 taaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 2481613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 22292701 - 22292783
Alignment:
Q  308 attttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||| ||| ||||  ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 22292783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 28389877 - 28389785
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||| ||| ||||  |||| | |||||| | |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  28389877 ttatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaa 28389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 474
Target Start/End: Original strand, 7809561 - 7809708
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 426  Q
    ||||||||||||||| || |||||||||||||||||||| |||| ||||||||||||||| ||| |||||||       || ||||||||||||| | ||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaatttta-tc 7809659  T
Q  427 ttatcctcttaccttt-attttgttgaagaaaatatgttatacacttat 474  Q
     ||||||||| |||||  |||| |||||| |||||| || |||||||||    
T  7809660 ctatcctcttgcctttgttttttttgaaggaaatattttctacacttat 7809708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8079295 - 8079387
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||| |||||   || ||  |||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  8079295 tccttatttattaattttgctgggt---caacagcttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaa 8079387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 24046058 - 24046123
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttg 356  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||    
T  24046058 cttatccttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 15456285 - 15456363
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 369  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15456285 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 15463669 - 15463747
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 369  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15463669 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 474
Target Start/End: Complemental strand, 8479198 - 8479075
Alignment:
Q  348 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  8479198 gctcatttgctttattagatttgcaatta-ttaacctaacaaatttcatct-aaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttt 8479102  T
Q  448 gttgaagaaaatatgttatacacttat 474  Q
     |  |||||||||| || |||||||||    
T  8479101 ttgtaagaaaatattttctacacttat 8479075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 474
Target Start/End: Original strand, 24049337 - 24049459
Alignment:
Q  352 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttg 451  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||       || ||||||| | |||||||| |||||||||   ||| |||| ||     
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcattcctatcctcttgttttttttttttta 24049436  T
Q  452 aagaaaatatgttatacacttat 474  Q
    ||| |||||| || |||||||||    
T  24049437 aaggaaatattttctacacttat 24049459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 32010789 - 32010701
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    ||||||||||||||||||  || ||||  ||||||| ||||||| || | |||||||| |||||||||||||| |||||||| ||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaa 32010701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 43162003 - 43161939
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||| ||| || |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  43162003 caatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaa 43161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 41852188 - 41852151
Alignment:
Q  361 attaggtttgcaattatttaacctaacaaacttcatct 398  Q
    |||||||||||||||||||||||||||||| |||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatct 41852151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 315
Target Start/End: Complemental strand, 21585498 - 21585467
Alignment:
Q  284 ttctacacttatccttatttattaattttgtt 315  Q
    ||||||||||||||||||||||||||||||||    
T  21585498 ttctacacttatccttatttattaattttgtt 21585467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 28380182 - 28380144
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  28380182 atcgcaccaatttcattcttatcctcttgcctttttttt 28380144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 2526940 - 2526989
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 346  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||| ||||    
T  2526940 cttatttattaattttggtaggtctgcagcaatttaacctaattttttcc 2526989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 8079018 - 8079111
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||| | | || | |||||||| ||||||| || || ||||||||| | ||||||||| ||| |  ||||||||||||||    
T  8079018 ttatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaa 8079111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 43161914 - 43161843
Alignment:
Q  412 gcaccaatttcattcttatcctcttacctttatttt---gttgaagaaaatatgttatacacttatccttat 480  Q
    ||||||||||||||| ||||||||| ||||| ||||    || |||||||||| || |||||||||||||||    
T  43161914 gcaccaatttcattcatatcctcttgccttttttttttcttttaagaaaatattttctacacttatccttat 43161843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 447
Target Start/End: Complemental strand, 47428498 - 47428372
Alignment:
Q  321 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatt 420  Q
    |||| ||| |||||||||| | ||||  | |||||| | ||||||||| ||| | ||||||||||||||| | |||||       || ||| ||||||||    
T  47428498 tgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaatgcatctcaccaatt 47428399  T
Q  421 tcattcttatcctcttacctttatttt 447  Q
    ||||| |||||||||| ||||| ||||    
T  47428398 tcatttttatcctcttgcctttttttt 47428372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 47428358 - 47428306
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 339  Q
    |||| |||||||||||||||||||||||| | | | || ||||||||||||||    
T  47428358 tacatttatccttatttattaattttgttagatctacaacaatttaacctaat 47428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 284 - 473
Target Start/End: Original strand, 46451456 - 46451643
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||| ||||||||||||||||||||||||||  || ||||  ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  46451456 ttctatacttatccttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacc 46451555  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactta 473  Q
    ||||||| | |||||       || |||||||||||||||||| ||||||||||||||  |||| ||||||||||||| || ||||||||    
T  46451556 taacaaattccatctaaaataatgcatcgcaccaatttcattcctatcctcttacctt--tttttttgaagaaaatattttctacactta 46451643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 295 - 474
Target Start/End: Original strand, 18094953 - 18095132
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| | |    
T  18094953 tccttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattcc 18095052  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||       || |||||||||||||||||| ||||||||| ||||| |||| || ||| |||| | || |||||||||    
T  18095053 atcttaaaaaatgaatcgcaccaatttcattcatatcctcttgccttttttttttttaaggaaattttttttacacttat 18095132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 302 - 474
Target Start/End: Original strand, 37760501 - 37760673
Alignment:
Q  302 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnn 401  Q
    ||||||||||||||  || |||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||        
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  402 nnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
        ||||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||| || |||||||||    
T  37760601 aaaatgtatcgcaccaatttcattcttatcctcttgcctttttttttttttagaaaatattttctacacttat 37760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 295 - 447
Target Start/End: Complemental strand, 47503162 - 47503010
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  47503162 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttc 47503063  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||       || |||||||||||||||||| ||||||||| ||||||||||    
T  47503062 atctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttatttt 47503010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 11454201 - 11454384
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||| | ||||||| |||||||||||||||||||||||||| ||    
T  11454201 atccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaattt 11454300  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||       || |||||||||||||||||| |||||| || |||   |||| || |||||||||| || |||||||||||||||    
T  11454301 catctaaaaaaatgcatcgcaccaatttcattcatatccttttgcct---ttttttttaagaaaatattttctacacttatccttat 11454384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 36643237 - 36643057
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |     
T  36643237 atccttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 36643138  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       |||||||||||||||| |||| ||||||||| ||||   ||| || ||| |||||| || |||||||||    
T  36643137 catctaaaaaaatgtatcgcaccaatttgattcctatcctcttgccttctgttttttaaaggaaatattttctacacttat 36643057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 38887476 - 38887373
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  38887476 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 38887377  T
Q  393 tcat 396  Q
    ||||    
T  38887376 tcat 38887373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 436
Target Start/End: Complemental strand, 837314 - 837171
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||||||||||||||||||| ||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  837314 tatccttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 837215  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     |||||       || ||||||||||||||||||||||||||||    
T  837214 ccatctaaaaaaatgcatcgcaccaatttcattcttatcctctt 837171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 11454367 - 11454565
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgg---gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattta 380  Q
    |||||||||||||||||||||||||||||||||    || |||| ||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  11454367 ttctacacttatccttatttattaattttgttgttacgtctgcagcaatttatcctaattttttc-tgctcatttgctttattaggcttgcaattattta 11454465  T
Q  381 acctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatcctta 479  Q
    ||||||||||||||||||        || ||||||||||||||||||  ||| | ||  |||| |||| ||||||||||||| || ||||||||||||||    
T  11454466 acctaacaaacttcatctaaaaaaaatgcatcgcaccaatttcattccaatcat-tttgctttttttttttgaagaaaatattttctacacttatcctta 11454564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 447
Target Start/End: Original strand, 40050845 - 40050998
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||||||||||||| |||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |    
T  40050845 tatccttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaa-t 40050943  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||||       || ||||||||||||| |||| ||||||||| ||||| ||||    
T  40050944 tcatctacaaaaatgcatcgcaccaatttaattcctatcctcttgcctttttttt 40050998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 11454548 - 11454655
Alignment:
Q  284 ttctacacttatccttatttattaatttt-gttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    ||||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  11454548 ttctacacttatccttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaac 11454647  T
Q  383 ctaacaaa 390  Q
    ||||||||    
T  11454648 ctaacaaa 11454655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 474
Target Start/End: Original strand, 35560101 - 35560280
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt--cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 395  Q
    ||||||||||||||||||   | |||| |||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  35560101 ttatttattaattttgttacttctgcagcaatttaacctaattttttttcct-ctcatttgctttattaggtttgcaattatttaacctaacaaatttca 35560199  T
Q  396 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttac--ctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||        || |||||||||||||||||| ||||||||| |  |||| |||| ||||||||||||| || |||||||||    
T  35560200 tccaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctctttttttttttgaagaaaatattttctacacttat 35560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 43017266 - 43017371
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||||| ||||||||||||||||  || |||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |    
T  43017266 tatcctcatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatt 43017365  T
Q  393 tcatct 398  Q
    ||||||    
T  43017366 tcatct 43017371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 18094737 - 18094833
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  18094737 atccttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaa 18094833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 53047693 - 53047545
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||     
T  53047693 ttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaatttcat- 53047595  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |       || |||||||||||||||||  ||||||||| ||||| ||||    
T  53047594 ttaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttt 53047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 292 - 447
Target Start/End: Complemental strand, 47503339 - 47503183
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||| ||  || | |  |||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||||||    
T  47503339 ttatccttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 47503240  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     |||||||       || |||||||||||||||||| |||||||||  |||||||||    
T  47503239 tttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgtctttatttt 47503183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 11522527 - 11522709
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| | || |||||||||||||||| || | | ||||||| |||||||||||| ||||| |||||||||||||| |    
T  11522527 tatccttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatt 11522626  T
Q  393 tcatct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||         || | ||||||||||||||||||||||||||  |||| |||| |||||| |||||| || |||||||||    
T  11522627 tcatctaaaaatatatgaaccgcaccaatttcattcttatcctcttgtcttt-tttttttgaaggaaatattttctacacttat 11522709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 447
Target Start/End: Complemental strand, 20877323 - 20877173
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || |||| |||||||| ||||||| ||||  ||||||| ||||||||||||||   ||||||||||||||||| |||||    
T  20877323 cttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcat 20877224  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  20877223 ctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 20877173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 38887691 - 38887592
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct--gctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||| ||||||||||||||| || ||| |||| |||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||||||||    
T  38887691 tatcattatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 38887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 38887905 - 38887809
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||| |  ||| ||||  ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||    
T  38887905 atccttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaa 38887809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 45514530 - 45514425
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| | |||||| |||||||| ||||||||||||||||||||| |||     
T  45514530 ttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaat 45514432  T
Q  392 ttcatct 398  Q
    |||||||    
T  45514431 ttcatct 45514425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  302 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 387  Q
    |||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 16015360 - 16015264
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||| ||||||| ||| | |   ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||    
T  16015360 atccttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaa 16015264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 24365735 - 24365834
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  ||       ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||     
T  24365735 ttatccttatttattaattttgttacgt-------aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaat 24365827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 11453933 - 11454030
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||  || || |  ||||||| ||||||| || || | |||||||||||||||||||||||||||||||||||||||||    
T  11453933 atccttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaa 11454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 46451320 - 46451425
Alignment:
Q  335 ctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcct 433  Q
    ||||||| | || |||||||||||||||||| |||||||||||||||||||||||| |||||||        || |||||||||||||||||| ||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcattcctatcct 46451419  T
Q  434 cttacc 439  Q
    ||||||    
T  46451420 cttacc 46451425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 47519955 - 47520015
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 387  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaac 47520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 51654074 - 51654136
Alignment:
Q  328 atttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaa 51654136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 442
Target Start/End: Original strand, 43819330 - 43819472
Alignment:
Q  300 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 399  Q
    |||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||| ||||| |||  || | ||||||||||| ||  |||||||     
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  400 nnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
          || || ||||||||||||||  |||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatttatatcctcttaccttt 43819472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 447
Target Start/End: Original strand, 11220780 - 11220925
Alignment:
Q  301 tttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 399  Q
    ||||||||||||||| ||| |||| |||||||||||||| || ||||  || ||||||| ||||||||| ||| | |||| |||||||||| |||||||     
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc--cttatttgctgtattaggttagcagtaattttacctaacaaatttcatcta 11220877  T
Q  400 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
          || || ||||||||||||||| ||||||||| ||||| ||||    
T  11220878 aaaaaatgcattgcaccaatttcattcatatcctcttgcctttttttt 11220925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 54274787 - 54274825
Alignment:
Q  353 tttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaac 54274825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 441
Target Start/End: Original strand, 3847821 - 3847960
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||| | |||  ||||||||||| || | |        | ||||||||||||||| ||    
T  3847821 atccttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgtagtgg--------tgatttaacctaacaaattt 3847912  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
    |||||       || |||||||||||||||||| ||||||||| ||||    
T  3847913 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttccctt 3847960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 46451238 - 46451295
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    ||||||||||||||||||||||||||||||||  || | || ||||||||||||||||    
T  46451238 ttctacacttatccttatttattaattttgttacgtctccaacaatttaacctaattt 46451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 398
Target Start/End: Original strand, 850960 - 851032
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct 398  Q
    ||||||||| |||||| || | ||||||||  ||||||||||||||||||||||||  ||||||| |||||||    
T  850960 caatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatct 851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 46451074 - 46451255
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||| |  || |||| ||||||||  |||||| || | |||||||| |||||    ||||||||||||||||||||||||| |     
T  46451074 atccttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcctttaa---gtttgcaattatttaacctaacaaattc 46451170  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
     ||||       || |||  |  |||||||||| |||||||||  |||  |||| ||||||||||||| || |||||||||||||||    
T  46451171 tatctaaaaaaatgcatcatattaatttcattcctatcctcttgtctt--tttttttgaagaaaatattttctacacttatccttat 46451255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 447
Target Start/End: Complemental strand, 21969118 - 21968965
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||||     
T  21969118 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaat 21969020  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    | |||||       || ||||||||||||||||||  |||||||| ||||| ||||    
T  21969019 tccatct-aaaaaatgcatcgcaccaatttcattcccatcctcttgcctttttttt 21968965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 447
Target Start/End: Complemental strand, 21991554 - 21991401
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||||     
T  21991554 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaat 21991456  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    | |||||       || ||||||||||||||||||  |||||||| ||||| ||||    
T  21991455 tccatct-aaaaaatgcatcgcaccaatttcattcccatcctcttgcctttttttt 21991401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 437
Target Start/End: Original strand, 52300747 - 52300850
Alignment:
Q  334 cctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcct 433  Q
    |||||||| |||| |||||||| || ||||||||| ||| | ||||||||||||||| | ||| |       || || ||||||||||||||| ||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcattcatatcct 52300846  T
Q  434 ctta 437  Q
    ||||    
T  52300847 ctta 52300850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 442
Target Start/End: Complemental strand, 20877007 - 20876974
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||||||||||||||||| |||||||||||||||    
T  20877007 atcgcaccaatttcattcctatcctcttaccttt 20876974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 294 - 480
Target Start/End: Complemental strand, 9142242 - 9142063
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| ||||  ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| | ||    
T  9142242 atccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaacacattt 9142143  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||         | ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| |||||| |||||||||||    
T  9142142 cat------tcttttatcgcaccaatttcattcttatcctcttgcctttgtttt-ttgaagaaaatattttatactcttatccttat 9142063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 23591524 - 23591370
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  23591524 tatccttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 23591425  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     |||||       || |||||||||||||||||| ||||||||||||||| ||||    
T  23591424 ccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttacctttttttt 23591370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 294 - 474
Target Start/End: Original strand, 18486630 - 18486808
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  18486630 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 18486729  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || |||  ||||||||||||| ||||||||| ||||  |||| |||||| |||||| || |||||||||    
T  18486730 catctaaaaaaatgcatcataccaatttcattcctatcctcttgcctt--tttttttgaagcaaatattttctacacttat 18486808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 4681005 - 4680828
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |     
T  4681005 atccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 4680906  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || |||||||||||||||||  ||||||||| ||||  |||| ||||||||||||| || |||||||||    
T  4680905 catct-aaaaaatgcatcgcaccaatttcatttctatcctcttgcctt--tttttttgaagaaaatattttctacacttat 4680828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 9142073 - 9141966
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9142073 cttatccttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 9141974  T
Q  391 cttcatct 398  Q
     |||||||    
T  9141973 tttcatct 9141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 292 - 474
Target Start/End: Complemental strand, 27716642 - 27716461
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| | || ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||      
T  27716642 ttatccttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaact 27716543  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    | |||||       || ||||||||||||| |||| ||||||||| ||||| ||||||| ||| |||||| || |||||||||    
T  27716542 tccatctaaaaaaatgcatcgcaccaatttgattcctatcctcttgccttttttttgtt-aaggaaatattttctacacttat 27716461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 296 - 474
Target Start/End: Complemental strand, 45419743 - 45419565
Alignment:
Q  296 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttca 395  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45419743 ccttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttca 45419644  T
Q  396 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||       || |||||||||||||||||  |||| |||| ||||| |||| |||||| |||||| || |||||||||    
T  45419643 tctaaaaagatgcatcgcaccaatttcatttctatcatcttgcctttttttttttgaaggaaatattttctacacttat 45419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 442
Target Start/End: Complemental strand, 48640911 - 48640761
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||  ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  48640911 tatccttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 48640812  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    ||||||        || |||||||||||||||||| ||||||||| |||||    
T  48640811 tcatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 48640761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 12140970 - 12140817
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||| ||    
T  12140970 atccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaattt 12140871  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  12140870 catctaaaagaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 12140817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 40450210 - 40450031
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||    
T  40450210 atccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaattt 40450111  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    | |||       || |||||| |||| |||||| |||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  40450110 cttctaaaaatatgcatcgcaacaatatcattcctatcatcttgccttt-ttttttttaaggaaatattttctacacttat 40450031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 11650118 - 11649971
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  11650118 tatccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 11650019  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
     |||||       || ||| |||||||||||||| ||||||||| ||||    
T  11650018 ccatct-aaaaaatgcatcacaccaatttcattcctatcctcttgcctt 11649971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 447
Target Start/End: Complemental strand, 48641135 - 48640972
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| ||| || | ||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||    
T  48641135 ttctacacttatccttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaacc 48641036  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     || ||| |||||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  48641035 aaaaaaatttcatctaaaaaaatgcatcgcaccaatttcattcatattctcttgcctttttttt 48640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 16671605 - 16671754
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  16671605 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 16671704  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  16671705 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 16671754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 17645973 - 17646122
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  17645973 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 17646072  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |       || |||||||||||||||||| ||||||||| ||||| ||||    
T  17646073 taaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 17646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 23591740 - 23591560
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||| |  ||||||| ||||| || ||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |     
T  23591740 atccttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattc 23591641  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || ||||||||||||||||||||||||||||  |||| |||| || ||| |||||| || ||| |||||    
T  23591640 catctgaaaaaatgcatcgcaccaatttcattcttatcctcttggcttttttttttttaaggaaatattttctactcttat 23591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 292 - 447
Target Start/End: Original strand, 22324278 - 22324433
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||||  |||| |||||||| |||| ||||||||| ||||||| |||||||||||     
T  22324278 ttatctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaat 22324377  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  22324378 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 22324433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 2527059 - 2526909
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||| || | |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttt 2526909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 11646042 - 11645938
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| ||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||     
T  11646042 ttatccttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaat 11645943  T
Q  392 ttcat 396  Q
    |||||    
T  11645942 ttcat 11645938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 11646509 - 11646353
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||||  || |||| ||| |||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  11646509 cttatccttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 11646410  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     | ||| |       || || ||||||||||||||| ||||||||| ||||| ||||    
T  11646409 ttccatataaaaaaatgcatagcaccaatttcattcctatcctcttgcctttttttt 11646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 27716421 - 27716322
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||||| ||| |  | |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27716421 cttatccttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 27716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 474
Target Start/End: Complemental strand, 45419947 - 45419771
Alignment:
Q  299 tatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||||| ||| ||||||||| ||||||| ||| ||  | ||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |       || |||||||||||||||||  |||||||||  | || |||| ||||||||||||| || |||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatttctatcctcttgtccttttttttttgaagaaaatattttctacacttat 45419771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 16492653 - 16492515
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| ||||||||| || ||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||    
T  16492653 atccttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaattt 16492555  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcct 433  Q
    |||||       || ||||||| |||||||||| ||||||    
T  16492554 catctaaaaaagtgcatcgcactaatttcattcatatcct 16492515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 327 - 442
Target Start/End: Original strand, 18487180 - 18487295
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 426  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||       || ||| ||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattc 18487279  T
Q  427 ttatcctcttaccttt 442  Q
     ||||||||| |||||    
T  18487280 ctatcctcttgccttt 18487295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 21224133 - 21224238
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||||||||  |    
T  21224133 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtt 21224232  T
Q  393 tcatct 398  Q
    ||||||    
T  21224233 tcatct 21224238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 16671241 - 16671422
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||||     
T  16671241 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaacaaat 16671339  T
Q  392 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||        || ||||||||| |||||||| ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  16671340 ttcatctaaaaaaaatgcatcgcaccagtttcattcctatcctctttccttt-ttttttttaaggaaatattttttacacttat 16671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 17645609 - 17645790
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||||     
T  17645609 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaacaaat 17645707  T
Q  392 ttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||        || ||||||||| |||||||| ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  17645708 ttcatctaaaaaaaatgcatcgcaccagtttcattcctatcctctttccttt-ttttttttaaggaaatattttttacacttat 17645790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 22774021 - 22773916
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||||||| || |||||||||||||||| ||||||||     
T  22774021 ttatccttatttattaattttgttacgtctgcaacaatttaacctaattt-ttcccgctcatttgctttactatgtttgcaattatttaatctaacaaat 22773923  T
Q  392 ttcatct 398  Q
    |||||||    
T  22773922 ttcatct 22773916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 436
Target Start/End: Original strand, 35124721 - 35124863
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||| ||||| ||| |||| ||||||||| |||||| ||   | ||||||||||||||||||||||||||||||||||||||||| |     
T  35124721 atccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaattc 35124820  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    | |||       || |||||||||||||||||| |||||||||    
T  35124821 cgtctaaaaaaatgcatcgcaccaatttcattcctatcctctt 35124863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 290 - 390
Target Start/End: Complemental strand, 2354778 - 2354678
Alignment:
Q  290 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||  ||||||    
T  2354778 acttattcttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaa 2354679  T
Q  390 a 390  Q
    |    
T  2354678 a 2354678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 474
Target Start/End: Complemental strand, 2853329 - 2853143
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||| |||||||||||||||   | || |||||||||||||||||| ||  | | ||||||| |||||||||||||||||||||||||||||||||    
T  2853329 ttatccttgtttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaa 2853230  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttgttgaagaaaatatgttatacacttat 474  Q
     |||||||       || |||||||||||||||||  ||||||| | ||   ||| |||| ||||||||||||| || |||||||||    
T  2853229 tttcatctaaaaaaatgcatcgcaccaatttcatttctatcctcctgccttttttttttttttgaagaaaatattttctacacttat 2853143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 448
Target Start/End: Original strand, 34837441 - 34837591
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||| |||||||| ||| | || ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  34837441 cttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcat 34837539  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 448  Q
    ||       || ||||||| |||||||||  ||||||||| ||||| |||||    
T  34837540 ctaaaaaaatgcatcgcacaaatttcatttatatcctcttgccttttttttg 34837591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 11646620 - 11646705
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta 376  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||    
T  11646620 cttatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 34837183 - 34837280
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||| ||| || | ||| |||||||||||||||||| ||||||||||||||||||||    
T  34837183 atccttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaa 34837280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 398
Target Start/End: Complemental strand, 48641546 - 48641447
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||| ||  || ||||  || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattt-ttcctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 32278245 - 32278158
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 381  Q
    ||||||||||||||||| ||||  || |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  32278245 atccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 19222100 - 19222198
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| ||  | | |||||||||||||||||||| ||||||||||||||||||||    
T  19222100 tatccttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaa 19222198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 447
Target Start/End: Complemental strand, 11646312 - 11646166
Alignment:
Q  300 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 399  Q
    ||||||||||||||||  || |||| ||| |||||||||||| || |  |||||||||||| ||||||||||||||||||||||||||||| | | |||     
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtct- 11646214  T
Q  400 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
          || |||||||||||||||||| ||||||||| ||||| ||||    
T  11646213 aaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 11646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 46264393 - 46264296
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||  || |||| ||| | |||||||||| || ||  ||||||||||||||||||||||||||||||||||||||||||    
T  46264393 atccttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaa 46264296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 4681227 - 4681162
Alignment:
Q  321 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 4681162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 21128036 - 21128132
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| || ||||||||||| | || | ||| ||||||||||||| |||| || |||||||||||||||||    
T  21128036 atccttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaa 21128132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 30991452 - 30991552
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    ||||||||||||||| ||||||| |  || |||| ||||||||| |||||| ||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  30991452 cttatccttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaa 30991551  T
Q  390 a 390  Q
    |    
T  30991552 a 30991552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 1566591 - 1566513
Alignment:
Q  321 tgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatct 398  Q
    |||| |||||||||||||||| ||  | || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  1566591 tgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatct 1566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 474
Target Start/End: Complemental strand, 16362788 - 16362620
Alignment:
Q  305 ttaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnn 404  Q
    |||||||| || ||| |||| |||| ||| ||||||| || | ||||||||| |||||||| |||||| ||||||||||||||||| ||||||           
T  16362788 ttaattttattaggtatgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaa 16362689  T
Q  405 ntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
     || ||||||||||| ||||||  |||||||| ||||| |||| || || ||||||| || |||||||||    
T  16362688 atgcatcgcaccaatatcattc-catcctcttgccttttttttttttaaaaaaatattttctacacttat 16362620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 43059223 - 43059283
Alignment:
Q  330 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaa 43059283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 398
Target Start/End: Complemental strand, 4681700 - 4681603
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| |||| | |   ||||||||||||||||||||||||||||| ||||||| |||||    
T  4681700 cttatttattaattttgttacgtctgcagcaatttaacttaattt-ttcccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcat 4681605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 23591309 - 23591238
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 364  Q
    ||||||||||||| ||||||||| ||| | |  |||||||||||||||| |||| |||||||||||||||||    
T  23591309 tatccttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttatta 23591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 4454918 - 4455016
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||| || ||| |||| ||| |||||||||| | ||||  |  ||||||| ||||||||| ||| | |||||||||||||||    
T  4454918 ttatccttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaa 4455016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 390
Target Start/End: Complemental strand, 40686943 - 40686905
Alignment:
Q  352 atttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40686943 atttgctttattaggtttgcaattatttaacctaacaaa 40686905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 34837383 - 34837431
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  34837383 tatccttatttattaattttgttaggtctgcaacaatttaacctaattt 34837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 34837650 - 34837698
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    ||||||||||||||| ||||||| ||| |||| ||||||||||||||||    
T  34837650 tatccttatttattagttttgttaggtatgcagcaatttaacctaattt 34837698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 474
Target Start/End: Complemental strand, 27712630 - 27712564
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttat-tttgttgaagaaaatatgttatacacttat 474  Q
    |||||||||||||||||||||||||||| ||||| | ||| |||||  |||||| || |||||||||    
T  27712630 atcgcaccaatttcattcttatcctcttgcctttttcttttttgaatgaaatattttctacacttat 27712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 4455363 - 4455408
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaat 339  Q
    ||||||||||||||||||| || ||| |||| ||||||||||||||    
T  4455363 atccttatttattaattttattaggtctgcaacaatttaacctaat 4455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 293 - 442
Target Start/End: Complemental strand, 28612344 - 28612195
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  28612344 tatccttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 28612245  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
     |||||       || |||||||||||||||||| ||||||||| |||||    
T  28612244 ccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt 28612195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 480
Target Start/End: Complemental strand, 5001778 - 5001624
Alignment:
Q  325 tcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcat 424  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||       || ||||||||||||||||    
T  5001778 tcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcat 5001679  T
Q  425 tcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||  |||||||| ||||| |||| ||||||||||||| || |||||||||||||||    
T  5001678 tccgatcctcttgccttt-tttttttgaagaaaatattttttacacttatccttat 5001624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 472
Target Start/End: Original strand, 44256468 - 44256647
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| ||||||||||||| ||| |||||||||||| ||| |    
T  44256468 tatctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaatt 44256567  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactt 472  Q
    ||||||       || |||||||||||||||||  ||||||||| ||||| |||| ||||| ||||||| || |||||||    
T  44256568 tcatctaaaaaaatgcatcgcaccaatttcatttctatcctcttgcctttttttttttgaaaaaaatattttctacactt 44256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 447
Target Start/End: Complemental strand, 28612128 - 28611978
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| |||  | ||    
T  28612128 cttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattat 28612029  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||       || |||||||||||||||||||||||||||| ||||| ||||    
T  28612028 ctaaaaaaatgcatcgcaccaatttcattcttatcctcttgcctttttttt 28611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 291 - 436
Target Start/End: Original strand, 11735903 - 11736047
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||||||    
T  11735903 cttatccttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaa 11736001  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     |||||||       || |||||||| |||||||||||||||||||    
T  11736002 tttcatctaaaaaaatgcatcgcaccgatttcattcttatcctctt 11736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 447
Target Start/End: Complemental strand, 41995865 - 41995710
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||| ||||||||||||||||||  || || | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||     
T  41995865 ttatctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaat 41995766  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    | |||||       || ||||||| |||||||||| ||||||||| ||||| ||||    
T  41995765 tccatctaaaaacatgcatcgcacgaatttcattcctatcctcttgcctttttttt 41995710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 287 - 480
Target Start/End: Complemental strand, 5001638 - 5001447
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||| |||  | |||||||||||||||||||  || |||||||||||||    
T  5001638 tacacttatccttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaa 5001539  T
Q  387 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
     ||| |||||||       || ||||||||||||| |||| ||||||||| ||||  || | || |||||||||| || |||||||||||||||    
T  5001538 aaaatttcatctaaaaaaatgcatcgcaccaatttaattcctatcctcttgcctt--ttgtttttaagaaaatattttctacacttatccttat 5001447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 28611919 - 28611765
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||  |    
T  28611919 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagtt 28611820  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     |||||       || ||||||||||| |||||| ||||| ||| ||||| ||||    
T  28611819 ccatctaaaaaaatgcatcgcaccaatatcattcctatccccttgcctttttttt 28611765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 28612766 - 28612614
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||| |    
T  28612766 tatccttatttattaattttgttaggc-tgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatt 28612669  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  28612668 tcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 28612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 295 - 447
Target Start/End: Complemental strand, 10129606 - 10129454
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||| |      
T  10129606 tccttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattct 10129507  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||       |  |||||||||||||||||| ||||||||| ||||| ||||    
T  10129506 atctaaaaaaattcatcgcaccaatttcattcctatcctcttgcctttttttt 10129454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 28612556 - 28612403
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||||| ||| |    
T  28612556 tatccttatttattaattttgttaggc-tgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaatt 28612458  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    | ||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  28612457 ttatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 28612403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 474
Target Start/End: Original strand, 6348066 - 6348246
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| ||||||||| |||||| |||  ||||| ||||||||||||||||||||||||||||  |||||||     
T  6348066 ttatccttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaat 6348165  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||       || |||||||||||||||||   |||||||| ||||  |||| ||||||||||||| || | |||||||    
T  6348166 ttcatctaaaaaaatgcatcgcaccaatttcatttcgatcctcttgcctt--tttttttgaagaaaatattttcttcacttat 6348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 471
Target Start/End: Original strand, 29550119 - 29550311
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttat----taggtttgcaattattt 379  Q
    ||||||| ||||||||||||||||||||| || ||| |||| |||||||||||||||| || | |||||||||||||||    |||||||||||||||||    
T  29550119 ttctacatttatccttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattattt 29550218  T
Q  380 aacctaacaaacttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacact 471  Q
    ||||||||||| |  ||||        || |||||||||||||||||  |||| |||| ||||| |||| ||||||||||||| || ||||||    
T  29550219 aacctaacaaattcaatctaaaaaaaatgcatcgcaccaatttcattactatcttcttgcctttttttttttgaagaaaatattttctacact 29550311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 474
Target Start/End: Complemental strand, 37131597 - 37131418
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| || |  |||||||||||||||| ||||||||||||||||| ||||||| ||    
T  37131597 atccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaattt 37131499  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || ||| |||||||||||||| |||||||||  | || |||| ||||||  ||||| || |||||||||    
T  37131498 catctaaaaaaatgcatcacaccaatttcattcctatcctcttgtcattttttttttgaagggaatattttctacacttat 37131418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 44543835 - 44543733
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||| ||||||||||||||||||||  ||  ||| |||||||||||||||| | || |||||||||||||||| |||||||||||||||||||    
T  44543835 ttctacacttaaccttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacc 44543736  T
Q  384 taa 386  Q
    |||    
T  44543735 taa 44543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 627531 - 627628
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| ||||||||  |||||||||||||||||||||||    
T  627531 ttatccttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 29549944 - 29550050
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||  ||||||||||||||| |||  | |||||||||||||||||||||  |||||||||||    
T  29549944 ttctacatttatcctcatttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacc 29550043  T
Q  384 taacaaa 390  Q
    |||||||    
T  29550044 taacaaa 29550050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 343 - 480
Target Start/End: Original strand, 6347938 - 6348075
Alignment:
Q  343 ttcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||       | ||||||||||||||||||| ||||||||| |||||    
T  6347938 ttcccgctcatttgctttattag-tttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcattcctatcctcttgccttt 6348036  T
Q  443 attttg-ttgaagaaaatatgttatacacttatccttat 480  Q
     ||||| ||||||||||||| || || | ||||||||||    
T  6348037 tttttgtttgaagaaaatattttctatatttatccttat 6348075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 28612979 - 28612825
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg-tttgcaattatttaacctaacaaact 392  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||  | ||||||| ||||||||| ||| ||||||||||| |||||||| |    
T  28612979 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaatt 28612880  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     |||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  28612879 ccatctaaaataatgcatcgcaccaatttcattcctattctcttgcctttttttt 28612825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 3249909 - 3249756
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| | | |||| |||||||||||||| | || | ||| ||||||| ||||||||| ||| | ||||||||||||||| ||    
T  3249909 atccttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaattt 3249810  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||       || |||||||||||||||||| |||| |||| ||||| ||||    
T  3249809 catctaaaaaaatgcatcgcaccaatttcattcctatcatcttgcctttttttt 3249756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 480
Target Start/End: Complemental strand, 5001430 - 5001296
Alignment:
Q  348 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttatt 445  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | |||||       || |||||||||||||||||| ||||||||| ||  ||| ||    
T  5001430 gctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 5001331  T
Q  446 ttgttgaagaaaatatgttatacacttatccttat 480  Q
    || || |||||||||| || |||||||||||||||    
T  5001330 ttttttaagaaaatattttctacacttatccttat 5001296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 447
Target Start/End: Original strand, 11736329 - 11736450
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 425  Q
    |||||||||||||| | |||| |||||||||||| || ||||||||||||||||||||||||||| |||||||       || |||||||||||||||||    
T  11736329 caatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 11736428  T
Q  426 cttatcctcttacctttatttt 447  Q
      |||| |||| ||||| ||||    
T  11736429 tctatcatcttgcctttttttt 11736450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 5013301 - 5013210
Alignment:
Q  299 tatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||  || |||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||||||  |||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaa 5013210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 29549785 - 29549929
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||| ||||||||| ||||||||| ||| | || | ||||||| || ||| || | |||||||||||||||||||||| |||||||||||||||| |||     
T  29549785 ttattcttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaat 29549884  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |||||||       || | |||||||||||||||| |||||||||    
T  29549885 ttcatctaaaaaaatgcaccgcaccaatttcattcctatcctctt 29549929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 293 - 436
Target Start/End: Complemental strand, 3249693 - 3249550
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||| | |||| ||||||||||| |||||||||  || | ||||||||||||||  |    
T  3249693 tatccttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattt 3249594  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    ||||||       |  |||||||||||||||||  |||||||||    
T  3249593 tcatctaaaaaaatacatcgcaccaatttcatttatatcctctt 3249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 436
Target Start/End: Original strand, 41326372 - 41326507
Alignment:
Q  301 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnn 400  Q
    ||||||||||||||| ||| |||| ||||||||| |||||| | || ||||||||| ||||||| ||||||||||||||||||||| |||  | ||||      
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  401 nnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
         || |||||||||||||||||  |||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatttctatcctctt 41326507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 480
Target Start/End: Complemental strand, 5013100 - 5012966
Alignment:
Q  348 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattt 446  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | |||||       || |||||||||||||||||| ||||||||| || ||| |||    
T  5013100 gctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 5013001  T
Q  447 tgttgaagaaaat-atgttatacacttatccttat 480  Q
    | || |||||||| || || |||||||||||||||    
T  5013000 tttttaagaaaataattttctacacttatccttat 5012966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 12898019 - 12898115
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| | | |||| ||||||||||| || | || | |||||||| |||| |||||||||||||||||||| ||||||||    
T  12898019 atccttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaa 12898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 447
Target Start/End: Original strand, 627629 - 627725
Alignment:
Q  351 catttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcctttttttt 627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 480
Target Start/End: Complemental strand, 44543714 - 44543606
Alignment:
Q  372 aattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacact 471  Q
    ||||||||||||||||||| |||||||       || ||| |||||||||||||| ||||||||| | ||| |||| ||||||||||||| || ||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcattcctatcctcttgcttttttttttttgaagaaaatattttctacact 44543615  T
Q  472 tatccttat 480  Q
    |||||||||    
T  44543614 tatccttat 44543606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 44544037 - 44543944
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||||||  ||  ||| ||||||||| |||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  44544037 tatccttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaa 44543944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 12896533 - 12896444
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||  || | || ||||||||| |||| | || | ||||||||| |||||||||||||||||||||||| ||||    
T  12896533 cttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaa 12896444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 2132310 - 2132238
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 369  Q
    |||||||||||| |||||| ||| |||| |||||||||||||||| |  ||||||||||||||| ||||||||    
T  2132310 cttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 20708899 - 20708980
Alignment:
Q  361 attaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||| ||||||||||||||||||||||||| |||||||       || ||||||||||||||||||||| |||||| |||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattcttaccctcttgccttt 20708980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 474
Target Start/End: Original strand, 11657483 - 11657623
Alignment:
Q  329 tttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattctt 428  Q
    ||||||||||||| |||  | ||||||||||||   |||||||||||||||||| ||||||| |||||||       || |||||||||||||||||| |    
T  11657483 tttaacctaattttttctcgttcatttgcttta---ggtttgcaattatttaac-taacaaatttcatctaaaaaaatgcatcgcaccaatttcattcct 11657578  T
Q  429 atcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  11657579 atcatcttgccttt-ttttttttaaggaaatattttctacacttat 11657623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 44543623 - 44543574
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaa 333  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  44543623 ttctacacttatccttatttattaattttgttaggtctgcagcaatttaa 44543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 5001313 - 5001268
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 329  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5001313 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5001268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 5012983 - 5012938
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 329  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5012983 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5012938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 312
Target Start/End: Complemental strand, 5001464 - 5001436
Alignment:
Q  284 ttctacacttatccttatttattaatttt 312  Q
    |||||||||||||||||||||||||||||    
T  5001464 ttctacacttatccttatttattaatttt 5001436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 312
Target Start/End: Complemental strand, 5013134 - 5013106
Alignment:
Q  284 ttctacacttatccttatttattaatttt 312  Q
    |||||||||||||||||||||||||||||    
T  5013134 ttctacacttatccttatttattaatttt 5013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 480
Target Start/End: Complemental strand, 5013186 - 5013117
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||||||||||||| |||| ||||||||| ||||  || | || |||||||||| || |||||||||||||||    
T  5013186 atcgcaccaatttaattcctatcctcttgcctt--ttgtttttaagaaaatattttctacacttatccttat 5013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 474
Target Start/End: Original strand, 318551 - 318730
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |     
T  318551 atccttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 318650  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||| ||||||||||||| || |||||||||    
T  318651 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttgaagaaaatattttctacacttat 318730  T

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Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 51113892 - 51114093
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||    
T  51113892 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacc 51113991  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttg--ttgaagaaaatatgttatacacttatcctt 478  Q
    ||||||| | |||||       || |||||||||||||||||| ||||||||| ||   ||| |||||  ||||||||||||| || |||| ||||||||    
T  51113992 taacaaattccatctaaaaaaatgcatcgcaccaatttcattcatatcctcttgcccttttttttttgttttgaagaaaatattttctacatttatcctt 51114091  T
Q  479 at 480  Q
    ||    
T  51114092 at 51114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 480
Target Start/End: Complemental strand, 42497411 - 42497214
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||| |||||||||||||||||||| | ||| |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  42497411 ttctacactaatccttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacc 42497312  T
Q  384 taacaaacttcatct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||||||| |||||||         || || ||||||||||||||| ||||||||| | ||| ||||| |||||||||||| || ||||||| |||||||    
T  42497311 taacaaatttcatctgaaaaaaaatgcattgcaccaatttcattcctatcctcttgctttttttttg-tgaagaaaatattttctacacttctccttat 42497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 292 - 474
Target Start/End: Original strand, 5428522 - 5428704
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||     
T  5428522 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaat 5428621  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttac-ctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||       ||  ||||||||||||||||| ||||||||| |  ||| ||||||||||| |||||| || |||||||||    
T  5428622 ttcatct-aaaaaatgcttcgcaccaatttcattcctatcctcttgcatttttttttgttgaaggaaatattttctacacttat 5428704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 295 - 474
Target Start/End: Complemental strand, 1156174 - 1155991
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    ||||||||||||||| |||||  |  |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  1156174 tccttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcc 1156075  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc----tttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||       || |||||||||||||||||||||||||||| ||    ||| |||| ||||||||||||| || |||||||||    
T  1156074 atctaaaaaaatgcatcgcaccaatttcattcttatcctcttgcctttttttttttttttgaagaaaatattttctacacttat 1155991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 292 - 474
Target Start/End: Original strand, 1647537 - 1647719
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||     
T  1647537 ttatccttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaat 1647636  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||       || |||||||||||||||||  |||| |||| ||||| |||| || ||| |||||| || |||||||||    
T  1647637 ttcatctaaaaaaatgaatcgcaccaatttcatttctatcatcttgccttttttttttttaaggaaatattttctacacttat 1647719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 291 - 474
Target Start/End: Complemental strand, 42492278 - 42492089
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  42492278 cttatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 42492179  T
Q  391 cttcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc-----tttattttgttgaagaaaatatgttatacacttat 474  Q
     | |||||        || |||||||||||||||||| ||||||||| ||     ||| |||| ||||||||||||| || |||||||||    
T  42492178 ttccatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctgttttttttttttttgaagaaaatattttctacacttat 42492089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 474
Target Start/End: Original strand, 21617756 - 21617931
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||| |||||||||||| ||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21617756 ttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 21617855  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |       || ||||||| |||||||||  ||||||||| ||||| |||| || ||| |||||| || |||||||||    
T  21617856 taaaaaaatgcatcgcactaatttcatttctatcctcttgccttt-ttttttttaaggaaatattttctacacttat 21617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 474
Target Start/End: Original strand, 38684011 - 38684194
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||| |     
T  38684011 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattc 38684110  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttg-aagaaaatatgttatacacttat 474  Q
    |||||       || |||||||||||||||||  ||||||||| ||  ||| |||||||| ||| |||||| ||||||||||||    
T  38684111 catctaaaaaaatgcatcgcaccaatttcatttctatcctcttgccttttttttttgttgaaaggaaatattttatacacttat 38684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 51113719 - 51113909
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||| ||    
T  51113719 atccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaattt 51113818  T
Q  394 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacc---tttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||        || |||||||||||||||||| |||||| || ||   ||| |||| ||||||||||||| || |||||||||||||||    
T  51113819 catctaaaaaaaatgcatcgcaccaatttcattcctatccttttgccttttttttttttttgaagaaaatattttctacacttatccttat 51113909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 447
Target Start/End: Original strand, 44263088 - 44263238
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || |||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| | |||    
T  44263088 cttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccat 44263187  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||       || |||||||||||||||||| ||||||||| ||||| ||||    
T  44263188 ctaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 44263238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 474
Target Start/End: Original strand, 27296326 - 27296510
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||    
T  27296326 tacacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaa 27296425  T
Q  387 caaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||| |||||||       |  ||||||||||||||||||  |||||||  |||   |||| || |||||||||| || |||||||||    
T  27296426 caaatttcatctataaaaatacatcgcaccaatttcattccaatcctctagcct---ttttttttaagaaaatattttctacacttat 27296510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 293 - 436
Target Start/End: Complemental strand, 16165797 - 16165653
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |    
T  16165797 tatccttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatt 16165698  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    ||||||        || |||||||||||||||||| |||||||||    
T  16165697 tcatctaaaaaaaatgcatcgcaccaatttcattcctatcctctt 16165653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 51114076 - 51114182
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| ||||||||||||||||||||||||  || || | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  51114076 ttctacatttatccttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacc 51114175  T
Q  384 taacaaa 390  Q
    |||||||    
T  51114176 taacaaa 51114182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 474
Target Start/End: Complemental strand, 3227333 - 3227153
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |    
T  3227333 tatccttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatt 3227235  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
     |||||        || || ||||||||||||||| ||||||||| | ||| |||| |||||| |||||| || |||||||||    
T  3227234 ccatctaaaaaaaatgcattgcaccaatttcattcctatcctcttgcattt-tttttttgaaggaaatattttctacacttat 3227153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 27296158 - 27296340
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||| ||| |     
T  27296158 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattc 27296257  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||       || |||||||||||||||||| ||||||||| ||||  |||| || |||||||||| || |||||||||||||||    
T  27296258 catct-aaaaaatgcatcgcaccaatttcattcatatcctcttgcctt--ttttttttaagaaaatat-ttttacacttatccttat 27296340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 390
Target Start/End: Original strand, 44263303 - 44263402
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||    
T  44263303 cttatccttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaa 44263402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 42497053 - 42496947
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| |||| ||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  42497053 ttctacaattatgcttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacc 42496954  T
Q  384 taacaaa 390  Q
    |||||||    
T  42496953 taacaaa 42496947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 5428919 - 5429025
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| | | |||| |||||||| ||||||| || | |||||| ||||||||||||||||||||||||||| |    
T  5428919 ttctacacttatccttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagc 5429018  T
Q  384 taacaaa 390  Q
    |||||||    
T  5429019 taacaaa 5429025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 51272600 - 51272510
Alignment:
Q  296 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||| ||| | || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  51272600 ccttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaa 51272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 52740696 - 52740850
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| || | |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||| |     
T  52740696 atccttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattc 52740795  T
Q  394 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     ||||        || |||||||||||||||||| ||||||||| ||||| ||||    
T  52740796 aatctaaaaaaaatgcatcgcaccaatttcattcctatcctcttgcctttttttt 52740850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 5429044 - 5429144
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt----cctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||    || ||||| ||||||||||||||||||||||||||||||||||||    
T  5429044 atccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaacaa 5429143  T
Q  390 a 390  Q
    |    
T  5429144 a 5429144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 28950107 - 28950016
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatt 375  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||    
T  28950107 ttctacacttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 300 - 480
Target Start/End: Complemental strand, 28950274 - 28950090
Alignment:
Q  300 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 399  Q
    ||||||||||||||||  ||  ||| ||||||||| |||||| || | || ||||||||||||||| |||| ||||||||||||||||||| |||||||     
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  400 nnnnnntgtatcgcaccaatttcattcttatcctcttacct----ttattttgttgaagaaaatatgttatacacttatccttat 480  Q
          || ||| |||||||||||||| ||||||||| |||    || |||| ||||||||||||| || |||||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcattcctatcctcttgcctcttcttttttttttgaagaaaatattttctacacttatccttat 28950090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 327 - 474
Target Start/End: Complemental strand, 44099747 - 44099602
Alignment:
Q  327 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattc 426  Q
    ||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| ||| |||||||       || || |||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct--aaaaatgcattgcaccaatttcattc 44099650  T
Q  427 ttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
     ||||||||| | ||| |||| ||||||||||||| || |||||||||    
T  44099649 ctatcctcttgcttttttttttttgaagaaaatattttttacacttat 44099602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 44262659 - 44262756
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| || |  |||||||||||||||| |||||||||||||||||||||||||    
T  44262659 tatctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaa 44262756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 28950368 - 28950277
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||||  || | || |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  28950368 tccttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 447
Target Start/End: Complemental strand, 4100890 - 4100749
Alignment:
Q  306 taattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnn 405  Q
    |||||||||| ||| |||| |||||||| ||||||| || | ||||||| | |||||||| |||||||||||||||||||| ||| |||||||           
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  406 tgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    || |||||||||||||||||  ||||||||| ||||||||||    
T  4100790 tggatcgcaccaatttcatttctatcctcttgcctttatttt 4100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 6537757 - 6537669
Alignment:
Q  302 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||| |||  ||| ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaa 6537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 352 - 474
Target Start/End: Original strand, 12115359 - 12115482
Alignment:
Q  352 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgtt 450  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||       || |||||||||||||||||| |||||| ||||| ||| |||| ||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcatatccttttacctttttttttttt 12115458  T
Q  451 gaagaaaatatgttatacacttat 474  Q
     |||||||||| || |||||||||    
T  12115459 taagaaaatattttctacacttat 12115482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 447
Target Start/End: Original strand, 18912326 - 18912477
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaacaaacttca 395  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | || ||||||||||||||||||||  ||||||||||| ||||||| ||||    
T  18912326 cttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttca 18912425  T
Q  396 tctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||       || || ||| ||||||||||| ||||||||| ||||| ||||    
T  18912426 tctaaaaaaatgcatagcatcaatttcattcctatcctcttgcctttttttt 18912477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 480
Target Start/End: Complemental strand, 42497575 - 42497394
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    ||||||||||||||||||| ||| ||||  |||||||| |||||| ||   ||||||||  ||||||||||||| ||||||||||| ||||||| |||||    
T  42497575 cttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcat 42497476  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
     |       |||||||||||||||||||| ||||||||||  |||| |||| || ||||||| || || |||||| ||||||||    
T  42497475 -ttaaaaaatgtatcgcaccaatttcattattatcctcttgtcttt-ttttttttaagaaaacattttctacactaatccttat 42497394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 448
Target Start/End: Complemental strand, 4100691 - 4100543
Alignment:
Q  299 tatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||||| ||| ||||  ||||||||||||||| || || ||||||||| ||||||| ||||||||||||||||| ||||||| |||||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 448  Q
    |        | |||||||||||||||||||||||||| | ||||| |||||    
T  4100591 taaaaaa--gcatcgcaccaatttcattcttatcctcatgccttttttttg 4100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 386
Target Start/End: Original strand, 24595224 - 24595316
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||||||||||||  |       ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24595224 tacacttatccttatttattaattttgttatg-------caatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaa 24595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 480
Target Start/End: Original strand, 24595086 - 24595238
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaat--tatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttca 423  Q
    |||||||||||||||| |||  ||| | || ||||||||||||||||||  |||||||||||||||| |||||||       || |||||||||||||||    
T  24595086 caatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaaaatgcatcgcaccaatttca 24595185  T
Q  424 ttcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    ||  ||||||||| ||||| ||||    |||||||||| || |||||||||||||||    
T  24595186 tttctatcctcttgcctttttttt----aagaaaatattttttacacttatccttat 24595238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 33375627 - 33375721
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaa 389  Q
    |||||||||||||||||||||  || |  | |||||||||||||||| |  | |||||||| |||||||||||||||||||||||||||||||||    
T  33375627 tccttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 382
Target Start/End: Complemental strand, 42497231 - 42497133
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||||||||| ||||||||||||||||||||| | | | || |||||||||||||||| |||   | ||||||||||||||||||| ||||||||||||    
T  42497231 ttctacacttctccttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaac 42497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 28949995 - 28949900
Alignment:
Q  300 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    ||||||||||||||||  || || | | |||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||| |||||    
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattt-ttcccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcat 28949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 52584966 - 52585078
Alignment:
Q  330 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattctta 429  Q
    |||||||||||| ||||  || ||||||||||||| ||||| ||||||||||||||||||| |||||||       || || ||||||||||||||| ||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcattcata 52585065  T
Q  430 tcctcttaccttt 442  Q
    ||||||| |||||    
T  52585066 tcctcttgccttt 52585078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 398
Target Start/End: Original strand, 18912215 - 18912316
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaacaaacttcat 396  Q
    ||||||||||||||||||  || |||| |||||||| ||||||| || | |||||||| ||||||||||||||  ||||||||||| ||||||| |||||    
T  18912215 ttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttcat 18912314  T
Q  397 ct 398  Q
    ||    
T  18912315 ct 18912316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 442
Target Start/End: Original strand, 43761941 - 43762091
Alignment:
Q  293 tatccttatttattaatttt-gttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||| ||| ||| | || |||||||||||||| | |||| | ||||||  | ||||||||| ||| | |||||| ||||||||     
T  43761941 tatccttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaat 43762040  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||||||       || |||||||||||||||||| ||| |||||||||||    
T  43762041 ttcatctaaaaaagtgcatcgcaccaatttcattcctatactcttaccttt 43762091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 6537541 - 6537465
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 369  Q
    ||||||||||||||||||||||| ||| || | ||||||||| |||||| ||||  |||||||||||||||||||||    
T  6537541 tatccttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 474
Target Start/End: Complemental strand, 45417655 - 45417531
Alignment:
Q  349 ctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttg 448  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||       || |||||||||||||||||| |||  |||| ||||| ||||     
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcattcctattgtcttgccttt-ttttt 45417557  T
Q  449 ttgaagaaaatatgttatacacttat 474  Q
    || ||| |||||| || |||||||||    
T  45417556 tttaaggaaatattttctacacttat 45417531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 293 - 383
Target Start/End: Original strand, 30083973 - 30084064
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt-attcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||||||||||||||| |||  ||| |||||||| |||||||  || | ||| ||||||||||||||||||| ||||||||||||    
T  30083973 tatccttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaacc 30084064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 480
Target Start/End: Complemental strand, 42492403 - 42492332
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||||||||||||||| ||||||||  ||||| |||| ||||||||||||| || | |||||||||||||    
T  42492403 atcgcaccaatttcattcctatcctctagcctttttttttttgaagaaaatattttctgcacttatccttat 42492332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 474
Target Start/End: Original strand, 24595324 - 24595388
Alignment:
Q  409 atcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    |||||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||    
T  24595324 atcgcaccaatttcattcctatcctcttgccttt-ttttttttaagaaaatattttctacacttat 24595388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 42492349 - 42492280
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcat 353  Q
    |||| |||||||||||||||||||||||||||  || | || |||||||||||| ||| |||| ||||||    
T  42492349 ttctgcacttatccttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 47790692 - 47790736
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaa 338  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||    
T  47790692 atccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 338
Target Start/End: Original strand, 52740914 - 52740955
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaa 338  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  52740914 cttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 474
Target Start/End: Original strand, 21618069 - 21618133
Alignment:
Q  410 tcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||||||||||||  ||||||||| ||||| |||| ||| || |||||| || |||||||||    
T  21618069 tcgcaccaatttcatttctatcctcttgcctttttttttttgtaggaaatattttctacacttat 21618133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 48553045 - 48552993
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 346  Q
    ||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  48553045 atccttatttattaattttgttaagtttgcagcaacttaacctaattttttcc 48552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 296 - 474
Target Start/End: Original strand, 25068186 - 25068366
Alignment:
Q  296 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt-c 394  Q
    ||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| || |    
T  25068186 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattcc 25068285  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||       || |||||||||||||||||| ||||||||| || |||||||| ||||||||||||| || |||| ||||    
T  25068286 atctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccgtttatttttttgaagaaaatattttctacagttat 25068366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 25067958 - 25068143
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||| |||||||||||   | |||| |||||||||||||||| || | ||||||||||||||| ||||||||||||||||||| ||||||| |     
T  25067958 atccttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaatta 25068057  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||       || |||||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||||||||    
T  25068058 catctaaaaaaatgcatcgcaccaatttcattcctatcctcttgccttt-tttttttaaagaaaatattttctacacttatccttat 25068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 17202843 - 17202999
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||| ||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||    
T  17202843 cttatccttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaa 17202942  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     | |||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  17202943 ttccatctaaaaaaatgcatcgcatcaatttcattcatatcctcttgcctttttttt 17202999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 447
Target Start/End: Original strand, 17201591 - 17201746
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| ||||||||||||| || || | ||||||||| |||||||||||||||||||||||||||||||||     
T  17201591 ttatccttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaat 17201690  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||       || |||||||||||||||||  ||||||||| ||||| ||||    
T  17201691 ttcatctaaaaaaatgcatcgcaccaatttcattgctatcctcttgcctttttttt 17201746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 442
Target Start/End: Complemental strand, 17906910 - 17906763
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |     
T  17906910 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattc 17906811  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||||       |||||||||||||||| |||  ||||||||| |||||    
T  17906810 catct-aaaaaatgtatcgcaccaattttatttctatcctcttgccttt 17906763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 474
Target Start/End: Original strand, 9828919 - 9829096
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||| ||||||||||||   | |||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  9828919 ttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 9829018  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 474  Q
    |       || |||||||||||||||||| ||||||||| || ||| |||| ||||||||||||| || || ||||||    
T  9829019 taaaaaaatgcatcgcaccaatttcattcctatcctcttgccttttttttttttgaagaaaatattttctagacttat 9829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 23622207 - 23622315
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||    
T  23622207 tacacttatccttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaa 23622306  T
Q  387 caaacttca 395  Q
    |||| ||||    
T  23622307 caaatttca 23622315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 27579594 - 27579690
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27579594 atccttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaa 27579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 23610426 - 23610570
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  23610426 ttatccttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaa 23610524  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     | |||||       || |||||||||||||||||  |||||||||    
T  23610525 ttccatctacaaaaatgcatcgcaccaatttcatttctatcctctt 23610570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 442
Target Start/End: Complemental strand, 4811172 - 4811023
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||| ||||||||  || |||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| || |     
T  4811172 atccttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattc 4811073  T
Q  394 catct-nnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||||        || |||||||||||||||||| ||||||||| |||||    
T  4811072 catctaaaaaaaatgaatcgcaccaatttcattcatatcctcttgccttt 4811023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 32208524 - 32208421
Alignment:
Q  287 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta-tttaaccta 385  Q
    ||||||||||||||||||||||||||| | ||| |||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  32208524 tacacttatccttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaaccta 32208426  T
Q  386 acaaa 390  Q
    |||||    
T  32208425 acaaa 32208421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 398
Target Start/End: Original strand, 808829 - 808930
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  397 ct 398  Q
    ||    
T  808929 ct 808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 435
Target Start/End: Complemental strand, 26832626 - 26832485
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||| |||||| | | |||| |||||||||||||||| || || ||| ||||||||||||||||||||||||||||||| ||||||| |    
T  26832626 atccttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaatt 26832528  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctct 435  Q
     |||||       || || ||||||||||||||||||||||||    
T  26832527 acatctaaaaaaatgcatagcaccaatttcattcttatcctct 26832485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 27315287 - 27315378
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||| ||| |||| ||| |||||||||||| ||||  || |||||||||||||||||||||||||||||||||||||||    
T  27315287 ttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaa 27315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 461
Target Start/End: Complemental strand, 4100428 - 4100258
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatt----tgctttattaggtttgcaattatttaacctaacaa 389  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | | |||||    |||||||||| |||||||||||||||| |||||||    
T  4100428 atccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaa 4100329  T
Q  390 acttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatat 461  Q
    | | |||||       || |||||||||||||||||  || |||||| ||||| |||| |||||| ||||||    
T  4100328 attccatctaaaaaaatgcatcgcaccaatttcatttctaccctcttgccttt-tttttttgaaggaaatat 4100258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 808468 - 808556
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||||||||||||||||||||| | | |||| ||||||||| |||||| |||  |||||||||||||||||| ||||||||||||||||    
T  808468 atccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaac 808556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 447
Target Start/End: Original strand, 17202681 - 17202780
Alignment:
Q  348 gctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||       ||||||||||||||||||||  ||||||||| ||||| ||||    
T  17202681 gctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcattgctatcctcttgcctttttttt 17202780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 17199982 - 17200134
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| ||| || | |||||||||||||| | ||||  |||||||||| |||||||||  || | ||||||||||| ||| ||    
T  17199982 atccttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaattt 17200081  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||       || |||||||||||||||||| ||| ||||| ||||| ||||    
T  17200082 catct-aaaaaatgcatcgcaccaatttcattcatattctcttgcctttttttt 17200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 29201553 - 29201624
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 364  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||    
T  29201553 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttatta 29201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 15130898 - 15130991
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||  || |||| ||| ||||| ||| |  || |  |||||| |||||||||| ||||||||||||||||||||||||    
T  15130898 cttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaa 15130991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 25068126 - 25068183
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    ||||||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||    
T  25068126 ttctacacttatccttatttattaattttgttacgtgtgcagctatttaacataattt 25068183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 4125759 - 4125712
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  4125759 atccttatttattaattttgttaggtctgcagcaatttaacctaattt 4125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 17201809 - 17201857
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 339  Q
    ||||||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  17201809 cttatccttatttataaattttgttaggtatgcagcaatttaacctaat 17201857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 808687 - 808749
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcattt 355  Q
    ||||||||||||||||||||||||  || |||  |||||||||||||||| |||| ||||||||    
T  808687 ttatccttatttattaattttgttatgtctgctgcaatttaacctaattt-ttcccgctcattt 808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 339
Target Start/End: Complemental strand, 24223268 - 24223222
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaat 339  Q
    |||||||||||||||||||| || ||| |||||||| ||||||||||    
T  24223268 tatccttatttattaattttatttggtctgcatcaacttaacctaat 24223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 447
Target Start/End: Original strand, 29201621 - 29201695
Alignment:
Q  373 attatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    |||||||||||||||||| |||||||       || ||| |||||||||||||| ||||||||| ||||| ||||    
T  29201621 attatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattcatatcctcttgcctttttttt 29201695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 17080031 - 17080127
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||| ||  || |||| |||  ||||||||| | ||||  |  ||||||| ||||||||| ||| | |||||||||||||||    
T  17080031 atccttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaa 17080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 1197873 - 1198053
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  1197873 tatccttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatt 1197972  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttat 474  Q
    ||||||       || |||||| ||||||||||| ||||||||| ||||| || | |||||| |||||| || |||| ||||    
T  1197973 tcatct-aaaaaatgcatcgcatcaatttcattcctatcctcttgccttttttattttgaaggaaatattttctacatttat 1198053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 480
Target Start/End: Complemental strand, 37198410 - 37198223
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||| ||||| ||||| ||||||||||||||     
T  37198410 ttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaat 37198311  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    | |||||       || || ||||||||||||||| ||||||||| ||||| |||| || |||||||||| || |||||||||||||||    
T  37198310 tccatctaaaaaaatgcattgcaccaatttcattcctatcctcttgccttt-ttttttttaagaaaatattttctacacttatccttat 37198223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 23831055 - 23830959
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23831055 atccttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 23830959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 474
Target Start/End: Complemental strand, 23960694 - 23960509
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||||||  || |||| ||||||||| |||||| || ||||||||| |||||||||||||| ||||||||||||||||||||    
T  23960694 cttatccttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaa 23960596  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttg-ttgaagaaaatatgttatacacttat 474  Q
     |||||||       || |||||||||||||||||| |||| |||| ||  ||| ||||| ||||||||||||| || |||||||||    
T  23960595 tttcatctaaaaaaatgcatcgcaccaatttcattcctatcttcttgcctgttttttttgtttgaagaaaatattttctacacttat 23960509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 480
Target Start/End: Complemental strand, 37198032 - 37197831
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta--------ggtttgcaatt 375  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| ||||||||        |||||||||||    
T  37198032 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt-ttcc-gctcattttctttattaatttattaggtttgcaatt 37197935  T
Q  376 atttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatc 475  Q
    ||||||||||||||| | |||||       || |||||||||||||||||| ||| ||||| ||||| |||| ||||||||||||| || ||||||||||    
T  37197934 atttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcattcctattctcttgccttt-tttttttgaagaaaatattttctacacttatc 37197836  T
Q  476 cttat 480  Q
    |||||    
T  37197835 cttat 37197831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 447
Target Start/End: Complemental strand, 3459246 - 3459092
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    |||||||||||| ||||||||||  || |||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |    
T  3459246 tatccttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatt 3459147  T
Q  393 tcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  3459146 tcatctaaaaaaatgcatcgcatcaatttcattcctatcctcttgcctttttttt 3459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 293 - 390
Target Start/End: Original strand, 13797437 - 13797534
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13797437 tatccttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaa 13797534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 23828234 - 23828141
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23828234 cttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaa 23828141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 29580145 - 29580007
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcat 396  Q
    |||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||| | |||||    
T  29580145 cttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcat 29580046  T
Q  397 ctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    ||       || |||||||||||||||||| |||||||||    
T  29580045 ct-aaaaattgcatcgcaccaatttcattcctatcctctt 29580007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 480
Target Start/End: Complemental strand, 39922192 - 39922013
Alignment:
Q  300 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctn 399  Q
    ||||||||| ||||||  || |||| ||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||     
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  400 nnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
          ||||| |||||||||| |||| |||||| || ||||| || | ||||||||||||| || | |||||||||||||    
T  39922092 aaaaaatgtattgcaccaattttattcctatcctattgccttt-ttattttgaagaaaatattttcttcacttatccttat 39922013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 301 - 436
Target Start/End: Complemental strand, 27853773 - 27853638
Alignment:
Q  301 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnn 400  Q
    |||||||||||||||  || || | |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| | |||||      
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  401 nnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
         || |||||||||||||||||| |||||||||    
T  27853673 aaaaatgcatcgcaccaatttcattcctatcctctt 27853638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 30439155 - 30439011
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc---ctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||||||| ||    ||| |||||||||||||||||||||||||||||||||||||||||    
T  30439155 atccttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaa 30439056  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     |||||||       || ||||||||||||| ||||||||||||||    
T  30439055 tttcatct-aaaaaatgcatcgcaccaattttattcttatcctctt 30439011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 23085860 - 23085948
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  23085860 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaa 23085948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 37410182 - 37410078
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||| ||  || |||| ||||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||| ||    
T  37410182 atccttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 37410083  T
Q  394 catct 398  Q
    |||||    
T  37410082 catct 37410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 447
Target Start/End: Original strand, 38111372 - 38111493
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 425  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| | |||||       || |||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T
Q  426 cttatcctcttacctttatttt 447  Q
    | ||||||||| ||||| ||||    
T  38111472 cctatcctcttgcctttttttt 38111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 32062811 - 32062917
Alignment:
Q  294 atccttatttattaattttgttgggtg--tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||||||||||||||||||||  ||   |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||     
T  32062811 atccttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaat 32062910  T
Q  392 ttcatct 398  Q
    |||||||    
T  32062911 ttcatct 32062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 447
Target Start/End: Original strand, 44429047 - 44429198
Alignment:
Q  295 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttc 394  Q
    ||||||||||||||||||||| ||| | || ||| |||||||||| | ||||  |||||||||||||||||||  ||||| ||||||||||||||| | |    
T  44429047 tccttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattcc 44429146  T
Q  395 atctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
    ||||       || |||||||||||||||||||||||||||||||||| ||||    
T  44429147 atct-aaaaaatgcatcgcaccaatttcattcttatcctcttacctttttttt 44429198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 23838449 - 23838356
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacct-aatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  23838449 ttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaa 23838356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 431
Target Start/End: Complemental strand, 40399604 - 40399467
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||| |||||||||| ||  || || | |||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||| |     
T  40399604 atccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaattc 40399505  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatc 431  Q
    |||||       || |||||||||||||||||| ||||    
T  40399504 catctaaaaaaatgcatcgcaccaatttcattcctatc 40399467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 326 - 447
Target Start/End: Original strand, 34947504 - 34947624
Alignment:
Q  326 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcatt 425  Q
    |||||||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||| |||||||       || ||||||| |||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatct-aaaaaatgcatcgcacaaatttcatt 34947602  T
Q  426 cttatcctcttacctttatttt 447  Q
    | ||||||||| ||||| ||||    
T  34947603 cctatcctcttgcctttttttt 34947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 35617680 - 35617774
Alignment:
Q  297 cttatttattaattttgttgggtgtgcat-caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||  || ||||  ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  35617680 cttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaa 35617774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 23838246 - 23838173
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggt 367  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  23838246 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggt 23838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 390
Target Start/End: Complemental strand, 23960910 - 23960814
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||| ||||||| ||||||||||  || |||| |||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||    
T  23960910 tatctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaa 23960814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 441
Target Start/End: Complemental strand, 604795 - 604639
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||| | ||| | | ||| || ||||||||||||||||  ||| | ||||||||    
T  604795 ttctacacttatccttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacc 604697  T
Q  384 taacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
    ||||||| |||||||       || |||||| ||||||||||| ||||||||| ||||    
T  604696 taacaaatttcatctaaaaaaatgcatcgcaacaatttcattcatatcctcttgcctt 604639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 386
Target Start/End: Complemental strand, 37198227 - 37198131
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||| |||||| |||||||||||  || |||| |||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  37198227 cttatcgttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaa 37198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 441
Target Start/End: Original strand, 33198827 - 33198975
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||| | || | ||||||||||| |||||||||  || | |||||||||||||||     
T  33198827 ttatcattatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaat 33198926  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctt 441  Q
    | |||||       || |||||||||||||||||| ||||||||| ||||    
T  33198927 tccatct-aaaaaatgcatcgcaccaatttcattcctatcctcttgcctt 33198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 474
Target Start/End: Complemental strand, 37197783 - 37197607
Alignment:
Q  298 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatc 397  Q
    ||||||||||||||||||   | |||| |||||||||||||||  ||||||||||||||||||||||  | |  ||||||||||||||||||| ||||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaatt--ttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  398 tnnnnnnntgtatcgcaccaatttcattcttatcctcttacc--tttattttgttgaagaaaatatgttatacacttat 474  Q
    |       || || ||||||||||  ||| ||||||||| ||  ||| |||| ||||||||||||| || |||||||||    
T  37197685 taaaaaaatgcatggcaccaatttatttcctatcctcttgcctttttttttttttgaagaaaatattttctacacttat 37197607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 442
Target Start/End: Original strand, 33198599 - 33198745
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||||||| |||  |||  ||||||||||||||| ||  | |||||||||| ||||||||| ||| | ||||||||||||||| ||    
T  33198599 atccttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaattt 33198696  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||||       || ||||| | ||||||||||| |||||||| |||||    
T  33198697 catctaaaacaatgcatcgcgcaaatttcattctcatcctcttgccttt 33198745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 44429210 - 44429316
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| |||||||||||||||||||  ||| | |||||||    
T  44429210 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-ctcatttgctttattaggtaagcagtaatttaac 44429308  T
Q  383 ctaacaaa 390  Q
    | ||||||    
T  44429309 ccaacaaa 44429316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 39922030 - 39921960
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatt 354  Q
    |||| |||||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||    
T  39922030 ttcttcacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 43419136 - 43419036
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||   | |||||||| |||| ||||||| |||| ||||||||||||||||||||||   | |||||||||||||||| ||    
T  43419136 atccttatttattaattttgttacatctgcatcaacttaatctaattt-ttcccgctcatttgctttattaggttt---actatttaacctaacaaattt 43419041  T
Q  394 catct 398  Q
    |||||    
T  43419040 catct 43419036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 44430053 - 44430159
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44430053 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44430152  T
Q  384 taacaaa 390  Q
     ||||||    
T  44430153 caacaaa 44430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 44433788 - 44433894
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433788 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44433887  T
Q  384 taacaaa 390  Q
     ||||||    
T  44433888 caacaaa 44433894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 18308319 - 18308259
Alignment:
Q  330 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||    
T  18308319 ttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaa 18308259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 436
Target Start/End: Original strand, 44430404 - 44430557
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||| | | ||||  |||||||||||||| ||||  ||| | ||||||||    
T  44430404 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacc 44430503  T
Q  384 taac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     ||| ||| |||||||       ||  ||||||||||||||||| |||||||||    
T  44430504 caacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctctt 44430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 436
Target Start/End: Original strand, 44433962 - 44434115
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| ||||||||||   ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433962 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacc 44434061  T
Q  384 taac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     ||| ||| |||||||       ||  ||||||||||||||||| |||||||||    
T  44434062 caacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctctt 44434115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 293 - 436
Target Start/End: Original strand, 2084871 - 2085015
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaact 392  Q
    ||||||||||||||||||||||| ||| |||| ||| |||| ||||| | ||||  |||||||||| ||||||||| | | | ||||||||||||||| |    
T  2084871 tatccttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaatt 2084970  T
Q  393 tcatct-nnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
     |||||        || |||||||||||||||||| |||||||||    
T  2084971 ccatctaagaaaaatgcatcgcaccaatttcattcctatcctctt 2085015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 44430227 - 44430421
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 382  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| | ||||| |||||||||||  ||| | |||||||    
T  44430227 ttctacacttattcttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-cccatttactttattaggtaagcagtaatttaac 44430325  T
Q  383 ctaac-aaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacacttatccttat 480  Q
    | ||| ||| |||||||       ||  ||||||||||||||||| ||||||||| | ||| |||| ||   || ||||| || |||||||||||||||    
T  44430326 ccaacaaaatttcatcttgaaaaatgcttcgcaccaatttcattcctatcctcttgctttttttttttt---gacaatattttctacacttatccttat 44430421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 44433623 - 44433767
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||| ||||||||| ||| |||| ||| || || |||| | ||||  | |||||||| ||||| ||| ||| | |||||||||||||||     
T  44433623 ttatccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaat 44433722  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  44433723 ttcatctaaaaaaatgcatcgcaccaatttcattcctatcctctt 44433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 37426110 - 37426208
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    ||||| ||||||||||||||||||  || |||| ||| |||  ||||||| || | |||||||| ||||||||||||||||||| |||||| |||||||    
T  37426110 ttatctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaa 37426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 37197848 - 37197791
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  37197848 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 37197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 446
Target Start/End: Complemental strand, 1276574 - 1276481
Alignment:
Q  353 tttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattt 446  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||       |  || ||||||||||||||| ||||||||| |||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcattcctatcctcttgcctttattt 1276481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 44434139 - 44434223
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtt 368  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||||| | ||||  |||||||| | |||||||||    
T  44434139 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttgttgtattaggtt 44434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 604623 - 604508
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 382  Q
    |||||||||||||||| ||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||||| ||||||||| ||| | |||||||    
T  604623 ttctacacttatccttgtttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaac 604524  T
Q  383 ctaacaaacttcatct 398  Q
     ||||||| |||||||    
T  604523 ataacaaatttcatct 604508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 42045633 - 42045737
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg--tttgcaattatttaacctaacaaac 391  Q
    |||||||||||| |||||||||  || |||| |||||||||||||||| ||  ||||||||| |||| ||| |  ||||||||||||||||||||||||     
T  42045633 atccttatttat-aattttgttacgtctgcagcaatttaacctaattttttt-tgctcatttactttgttaagagtttgcaattatttaacctaacaaat 42045730  T
Q  392 ttcatct 398  Q
    |||||||    
T  42045731 ttcatct 42045737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 44429888 - 44430032
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||| ||||||||| ||| |||| ||| || || |||| | ||||  | |||||| | ||||| ||| ||| | |||||||||||||||     
T  44429888 ttatccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaat 44429987  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctctt 436  Q
    |||||||       || |||||||||||||||||| |||||||||    
T  44429988 ttcatctaaaaaaatgcatcgcaccaatttcattcatatcctctt 44430032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 474
Target Start/End: Original strand, 38111190 - 38111297
Alignment:
Q  367 tttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttat 466  Q
    ||||||||| |||||||||||||| | |||||       |||||||| |||||||||||||||||||||| | |||  ||| |||||| |||||  || |    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcattcttatcctcttgctttttattttttgaaggaaataatttct 38111289  T
Q  467 acacttat 474  Q
    ||||||||    
T  38111290 acacttat 38111297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 604448 - 604344
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 382  Q
    |||||||||||||||||||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||| | |||||||||  || | |||||||    
T  604448 ttctacacttatccttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaac 604349  T
Q  383 ctaac 387  Q
    |||||    
T  604348 ctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 34345140 - 34345192
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 346  Q
    ||||||||||||||||||| || ||| |||| |||||||||||||||| ||||    
T  34345140 atccttatttattaattttattaggtctgcagcaatttaacctaattttttcc 34345192  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 44429383 - 44429485
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 383  Q
    ||||||||||||||||||||||||||||| || |   |||| ||| |||||||||| | ||||  ||| |||| | ||||||||| || || ||||||||    
T  44429383 ttctacacttatccttatttattaatttttttagaaatgcagcaacttaacctaatattttccctctcgtttgttgtattaggttagc-ataatttaacc 44429481  T
Q  384 taac 387  Q
    ||||    
T  44429482 taac 44429485  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 438
Target Start/End: Complemental strand, 604899 - 604813
Alignment:
Q  352 atttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttac 438  Q
    ||||||| |||||||||  || | ||||||||||||||| |||||||       || ||||||| |||||||||| |||||||||||    
T  604899 atttgctgtattaggttaccagtaatttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcattcctatcctcttac 604813  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 39922277 - 39922229
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    |||||||||||||||||||||||  || | || ||||||||||||||||    
T  39922277 tatccttatttattaattttgttacgtcttcagcaatttaacctaattt 39922229  T

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Target: scaffold0018 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 474
Target Start/End: Complemental strand, 163914 - 163731
Alignment:
Q  292 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaac 391  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||| |||     
T  163914 ttatccttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaat 163815  T
Q  392 ttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacc-tttattttgttgaagaaaatatgttatacacttat 474  Q
    | |||||       || |||||||||||||| ||| ||||||||| || |||  ||| |||||||| |||| || |||||||||    
T  163814 tccatctgaaaaaatgcatcgcaccaatttcgttcctatcctcttgccattttgttttttgaagaagatattttctacacttat 163731  T

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Target: scaffold0294 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 12495 - 12399
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||    
T  12495 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaa 12399  T

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Target: scaffold0320 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 14690 - 14512
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    ||||||||||||||||||||||   | |||||||||||||| ||||||||||  ||||||||| |||||||| |||||||||||||||||||||||| |     
T  14690 atccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaattc 14591  T
Q  394 catctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttattttgttgaagaaaatatgttatacactta 473  Q
     ||||       || ||| || ||||||| ||| ||||||||| ||||| |||| ||||||||||||| || ||||||||    
T  14590 tatctaaaaaaatgcatcccatcaatttc-ttcctatcctcttgcctttttttttttgaagaaaatattttctacactta 14512  T

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Target: scaffold0240 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 13088 - 13278
Alignment:
Q  294 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaactt 393  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||| |||||||||||||||||| |     
T  13088 atccttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattc 13187  T
Q  394 catct--nnnnnnntgtatcgcaccaatttcattcttatcctcttacctttat---tttgttgaagaaaatatgttatacacttatccttat 480  Q
    |||||         || |||||||||||||||||| ||||||||| ||||| |   ||| ||||||||||||| || || ||||||||||||    
T  13188 catctaaaaacaaatgcatcgcaccaatttcattcatatcctcttgcctttttccgttttttgaagaaaatattttcta-acttatccttat 13278  T

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Target: scaffold0240; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 436
Target Start/End: Original strand, 13285 - 13389
Alignment:
Q  332 aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatc 431  Q
    |||||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||       || |||||||||||||||||| ||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcctatc 13384  T
Q  432 ctctt 436  Q
    |||||    
T  13385 ctctt 13389  T

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Target: scaffold0013 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 102698 - 102852
Alignment:
Q  291 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaacaaa 390  Q
    |||||| |||||||||||||||||| | | ||||  ||||  ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||    
T  102698 cttatctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaa 102795  T
Q  391 cttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttacctttatttt 447  Q
     | |||||       || |||||| ||||||||||| ||||||||| ||||| ||||    
T  102796 ttccatctaaaaaaatgcatcgcatcaatttcattcctatcctcttgcctttttttt 102852  T

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Target: scaffold0504 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 1641 - 1551
Alignment:
Q  297 cttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaa 386  Q
    |||||||||||||||||||  || |||| |||||||| |||| ||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  1641 cttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaa 1551  T

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Target: scaffold0097 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 12735 - 12816
Alignment:
Q  361 attaggtttgcaattatttaacctaacaaacttcatctnnnnnnntgtatcgcaccaatttcattcttatcctcttaccttt 442  Q
    |||| ||||||||||||||||||||||||| |||||||       || ||||||||||||||||||||| |||||| |||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattcttaccctcttgccttt 12816  T

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Target: scaffold1155 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 1068 - 958
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 379  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  1068 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 969  T
Q  380 aacctaacaaa 390  Q
    |||||||||||    
T  968 aacctaacaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 9149 - 9259
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 379  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  9149 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 9248  T
Q  380 aacctaacaaa 390  Q
    |||||||||||    
T  9249 aacctaacaaa 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 29831 - 29721
Alignment:
Q  284 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 379  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  29831 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 29732  T
Q  380 aacctaacaaa 390  Q
    |||||||||||    
T  29731 aacctaacaaa 29721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 5420 - 5372
Alignment:
Q  293 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 341  Q
    |||||||||||||||||||| || ||| |||| ||| ||||||||||||    
T  5420 tatccttatttattaattttattaggtctgcagcaacttaacctaattt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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