View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0915_low_22 (Length: 342)
Name: NF0915_low_22
Description: NF0915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0915_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 9 - 313
Target Start/End: Original strand, 27683197 - 27683491
Alignment:
| Q |
9 |
caataatatattaccaaataaaggtgtgctaacttactcttatacactagagaatatatgaaatgattttgaagatgaatttcgcagagttttaaatcag |
108 |
Q |
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| T |
27683197 |
caataatatattaccaaataaaggtttgctaacttactcttatacactagagaatatatgaaatgattttgaagatga----------gttttaaatcag |
27683286 |
T |
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| Q |
109 |
agaagcatccaagttttttcttcatgaatgattcaaacataaaggtgtattgattcatgaataaacacacccaaacattgtgtgaaaaatgaatatgccc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27683287 |
agaagcatccaagttttttcttcatgaatgattcaaacataaaggtgtattgattcatgaataaacacacccaaacattgtgtgaaaaatgaatatgccc |
27683386 |
T |
|
| Q |
209 |
catcaaacaaattttataaccagcatggtccaagttttacgcaatttaggtcattcaaacttgtggtgatgagttcgatttctaatgagcggggagtagt |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |
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| T |
27683387 |
catcaaacaaattttataaccagcatggtccaagttttacgcaatttaggtcattcaaacgtgtggtgatgagttcgatttctgatgagcgtggagtagt |
27683486 |
T |
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