View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0916_high_17 (Length: 227)
Name: NF0916_high_17
Description: NF0916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0916_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 48107924 - 48108063
Alignment:
| Q |
5 |
tagtccaaagaatgaacgcctagccctgcatatatggtgtgaagatatatatgttagatattaaaagaattgtagcactgaattat--agagagggagag |
102 |
Q |
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| T |
48107924 |
tagtccaaagaatgaacgcctagccctgcatatatggtgtgaagatatatatgttagatattaaaagaatagtagcactgaattatagagagagggagag |
48108023 |
T |
|
| Q |
103 |
attgaaacctgagataaataaaaggaaagaggtgatgatg |
142 |
Q |
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| T |
48108024 |
attgaaacctgagataaataaaaggaaagaggtggtgatg |
48108063 |
T |
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