View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0916_low_1 (Length: 968)

Name: NF0916_low_1
Description: NF0916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0916_low_1
NF0916_low_1
[»] chr5 (35 HSPs)
chr5 (182-778)||(43307730-43308327)
chr5 (92-153)||(43307672-43307733)
chr5 (918-954)||(1429009-1429045)
chr5 (918-954)||(5830184-5830220)
chr5 (918-954)||(8467018-8467054)
chr5 (918-954)||(9200516-9200552)
chr5 (918-954)||(13956209-13956245)
chr5 (918-954)||(15992387-15992423)
chr5 (918-954)||(19120151-19120187)
chr5 (918-954)||(22973929-22973965)
chr5 (918-954)||(24886379-24886415)
chr5 (918-954)||(25669868-25669904)
chr5 (918-954)||(27330596-27330632)
chr5 (918-954)||(31705459-31705495)
chr5 (918-954)||(35826333-35826369)
chr5 (918-954)||(38528084-38528120)
chr5 (918-954)||(39573103-39573139)
chr5 (918-954)||(43308507-43308543)
chr5 (921-954)||(699442-699475)
chr5 (918-954)||(2888292-2888328)
chr5 (918-954)||(5837847-5837883)
chr5 (918-954)||(7693513-7693549)
chr5 (922-954)||(12910647-12910679)
chr5 (918-954)||(17157878-17157914)
chr5 (918-954)||(22019915-22019951)
chr5 (918-954)||(22255474-22255510)
chr5 (918-954)||(25889662-25889698)
chr5 (918-954)||(28416398-28416434)
chr5 (918-954)||(31786493-31786529)
chr5 (918-954)||(35511329-35511365)
chr5 (918-954)||(42343013-42343049)
chr5 (594-646)||(43291615-43291667)
chr5 (783-852)||(43308372-43308441)
chr5 (921-954)||(35504657-35504690)
chr5 (918-947)||(43254154-43254183)
[»] scaffold0318 (1 HSPs)
scaffold0318 (918-954)||(12201-12237)
[»] scaffold0291 (1 HSPs)
scaffold0291 (918-954)||(8179-8215)
[»] scaffold0002 (3 HSPs)
scaffold0002 (918-954)||(408286-408322)
scaffold0002 (918-954)||(420-456)
scaffold0002 (918-954)||(93957-93993)
[»] chr8 (26 HSPs)
chr8 (918-954)||(466123-466159)
chr8 (918-954)||(1149495-1149531)
chr8 (918-954)||(1149783-1149819)
chr8 (918-954)||(4132549-4132585)
chr8 (918-954)||(6098376-6098412)
chr8 (918-954)||(7890820-7890856)
chr8 (918-954)||(11727315-11727351)
chr8 (918-954)||(16223154-16223190)
chr8 (918-954)||(16446738-16446774)
chr8 (918-954)||(23854294-23854330)
chr8 (918-954)||(33906503-33906539)
chr8 (918-954)||(38644269-38644305)
chr8 (918-954)||(39098982-39099018)
chr8 (918-954)||(43643458-43643494)
chr8 (918-952)||(12587875-12587909)
chr8 (918-952)||(44869790-44869824)
chr8 (918-954)||(1205218-1205254)
chr8 (918-954)||(5299809-5299845)
chr8 (918-954)||(24823257-24823293)
chr8 (918-954)||(33198093-33198129)
chr8 (918-954)||(34895253-34895289)
chr8 (918-954)||(35459574-35459610)
chr8 (918-954)||(35859225-35859261)
chr8 (918-954)||(37970382-37970418)
chr8 (918-952)||(1953851-1953885)
chr8 (924-954)||(40862710-40862740)
[»] chr7 (29 HSPs)
chr7 (918-954)||(5657339-5657375)
chr7 (918-954)||(12166010-12166046)
chr7 (918-954)||(15672617-15672653)
chr7 (918-954)||(18797594-18797630)
chr7 (918-954)||(27284011-27284047)
chr7 (918-954)||(29173789-29173825)
chr7 (918-954)||(30055794-30055830)
chr7 (918-954)||(31578922-31578958)
chr7 (918-954)||(37110141-37110177)
chr7 (918-950)||(6546790-6546822)
chr7 (918-954)||(7335060-7335096)
chr7 (918-954)||(9355684-9355720)
chr7 (918-954)||(11071470-11071506)
chr7 (918-954)||(17842442-17842478)
chr7 (918-954)||(22687498-22687534)
chr7 (918-954)||(25691402-25691438)
chr7 (918-954)||(26587950-26587986)
chr7 (918-954)||(31520599-31520635)
chr7 (918-954)||(32820911-32820947)
chr7 (918-954)||(33688120-33688156)
chr7 (918-954)||(35353375-35353411)
chr7 (918-954)||(37703356-37703392)
chr7 (918-954)||(37704449-37704485)
chr7 (918-954)||(43925362-43925398)
chr7 (918-954)||(46480987-46481023)
chr7 (918-954)||(48928155-48928191)
chr7 (920-954)||(10481872-10481906)
chr7 (918-952)||(37347290-37347324)
chr7 (918-954)||(24212008-24212045)
[»] chr6 (10 HSPs)
chr6 (918-954)||(3879795-3879831)
chr6 (918-954)||(4318678-4318714)
chr6 (918-954)||(6091038-6091074)
chr6 (918-954)||(20768374-20768410)
chr6 (918-954)||(33619122-33619158)
chr6 (918-952)||(8513522-8513556)
chr6 (918-954)||(6089195-6089231)
chr6 (918-954)||(7234891-7234927)
chr6 (918-954)||(21016974-21017010)
chr6 (172-201)||(1792398-1792427)
[»] chr4 (32 HSPs)
chr4 (918-954)||(6864327-6864363)
chr4 (918-954)||(17272256-17272292)
chr4 (918-954)||(19089336-19089372)
chr4 (918-954)||(19440531-19440567)
chr4 (918-954)||(25184405-25184441)
chr4 (918-954)||(27396908-27396944)
chr4 (918-954)||(29584083-29584119)
chr4 (918-954)||(30002524-30002560)
chr4 (918-954)||(35025449-35025485)
chr4 (918-954)||(37663624-37663660)
chr4 (918-954)||(37775950-37775986)
chr4 (918-954)||(46883997-46884033)
chr4 (918-954)||(47254032-47254068)
chr4 (918-954)||(50765012-50765048)
chr4 (918-954)||(879431-879467)
chr4 (918-954)||(7703801-7703837)
chr4 (918-954)||(9139521-9139557)
chr4 (918-954)||(23431847-23431883)
chr4 (918-954)||(23761363-23761399)
chr4 (918-954)||(32579738-32579774)
chr4 (918-954)||(33341690-33341726)
chr4 (918-954)||(33816399-33816435)
chr4 (918-954)||(39400300-39400336)
chr4 (918-954)||(46888041-46888077)
chr4 (918-954)||(50697534-50697570)
chr4 (918-954)||(55477774-55477810)
chr4 (918-952)||(7152087-7152121)
chr4 (920-954)||(34947980-34948014)
chr4 (918-952)||(36493572-36493606)
chr4 (921-954)||(3042911-3042944)
chr4 (918-954)||(32912462-32912499)
chr4 (918-954)||(34361374-34361411)
[»] chr3 (32 HSPs)
chr3 (918-954)||(4015742-4015778)
chr3 (918-954)||(11357238-11357274)
chr3 (918-954)||(22622575-22622611)
chr3 (918-954)||(26941117-26941153)
chr3 (918-954)||(42505932-42505968)
chr3 (918-954)||(46297619-46297655)
chr3 (918-954)||(51212628-51212664)
chr3 (918-952)||(1089978-1090012)
chr3 (918-952)||(25580024-25580058)
chr3 (918-952)||(46994518-46994552)
chr3 (918-951)||(36012425-36012458)
chr3 (921-954)||(40552119-40552152)
chr3 (918-954)||(3362538-3362574)
chr3 (918-954)||(7327339-7327375)
chr3 (918-954)||(22451251-22451287)
chr3 (918-954)||(29099629-29099665)
chr3 (918-954)||(29164092-29164128)
chr3 (918-954)||(32373753-32373789)
chr3 (918-954)||(33378642-33378678)
chr3 (918-954)||(39282935-39282971)
chr3 (918-954)||(40936256-40936292)
chr3 (918-954)||(44186374-44186410)
chr3 (918-954)||(44891780-44891816)
chr3 (922-954)||(45174789-45174821)
chr3 (918-954)||(50475094-50475130)
chr3 (918-954)||(53229009-53229045)
chr3 (918-954)||(54828558-54828594)
chr3 (918-952)||(33698438-33698472)
chr3 (918-952)||(43975749-43975783)
chr3 (918-954)||(21009658-21009695)
chr3 (918-954)||(47481805-47481842)
chr3 (918-954)||(54506090-54506127)
[»] chr2 (19 HSPs)
chr2 (918-954)||(5881821-5881857)
chr2 (918-954)||(19314139-19314175)
chr2 (918-954)||(19424517-19424553)
chr2 (918-954)||(19500790-19500826)
chr2 (918-954)||(26357869-26357905)
chr2 (918-954)||(27349823-27349859)
chr2 (918-954)||(33660252-33660288)
chr2 (918-954)||(33709107-33709143)
chr2 (918-954)||(35959184-35959220)
chr2 (918-954)||(41961132-41961168)
chr2 (918-952)||(19289198-19289232)
chr2 (921-954)||(2325256-2325289)
chr2 (918-954)||(4478657-4478693)
chr2 (918-954)||(7006813-7006849)
chr2 (918-954)||(31570609-31570645)
chr2 (918-954)||(43770723-43770759)
chr2 (918-952)||(4763925-4763959)
chr2 (918-954)||(11366255-11366292)
chr2 (921-954)||(33550865-33550898)
[»] chr1 (36 HSPs)
chr1 (918-954)||(2960036-2960072)
chr1 (918-954)||(3535211-3535247)
chr1 (918-954)||(10923015-10923051)
chr1 (918-954)||(11742220-11742256)
chr1 (918-954)||(14758320-14758356)
chr1 (918-954)||(27227337-27227373)
chr1 (918-954)||(27532833-27532869)
chr1 (918-954)||(30326804-30326840)
chr1 (918-954)||(38823502-38823538)
chr1 (918-954)||(51129147-51129183)
chr1 (918-952)||(3309443-3309477)
chr1 (921-954)||(15383221-15383254)
chr1 (921-954)||(27267055-27267088)
chr1 (921-954)||(30254711-30254744)
chr1 (918-954)||(238365-238401)
chr1 (918-954)||(1547559-1547595)
chr1 (918-954)||(4330569-4330605)
chr1 (922-954)||(10181863-10181895)
chr1 (918-954)||(15168384-15168420)
chr1 (918-954)||(16415934-16415970)
chr1 (918-954)||(18422939-18422975)
chr1 (918-954)||(25160920-25160956)
chr1 (918-954)||(28564635-28564671)
chr1 (918-954)||(32216343-32216379)
chr1 (922-954)||(32267322-32267354)
chr1 (918-954)||(34012234-34012270)
chr1 (918-954)||(37451573-37451609)
chr1 (918-954)||(39393672-39393708)
chr1 (918-954)||(40885101-40885137)
chr1 (918-954)||(47682346-47682382)
chr1 (918-949)||(41926449-41926480)
chr1 (918-952)||(7078915-7078949)
chr1 (918-952)||(48353832-48353866)
chr1 (918-951)||(9902906-9902939)
chr1 (918-954)||(19899620-19899657)
chr1 (918-954)||(23999635-23999672)


Alignment Details
Target: chr5 (Bit Score: 470; Significance: 0; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 182 - 778
Target Start/End: Original strand, 43307730 - 43308327
Alignment:
Q  182 acttgaagccaacaatggaaatgcaatcaacgaaacacttatcttagtttgatatggatcgatccctacatgactggaaaaagttctatttccagccagn 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||     
T  43307730 acttgaagccaacaatggaaatgcaatcaacgaaacacttatcttagtttgatatggatc----cctacatgactggaaaaagttctatttccagccaga 43307825  T
Q  282 nnnnnncaatgaagatatcaaagtagcgtctttcatacaataca------atgtcgaacttatttgagagtgtcttataaaatcatgcaaaacacatatt 375  Q
          ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43307826 aaaaaacaatgaagatatcaaagtagcgtctttcatacaatacatatacaatgtcgaacttatttgagagtgtcttataaaatcatgcaaaacacatatt 43307925  T
Q  376 tgaatgaaatatatatacggacctgatagttataggtgactccgcaaagagtgttattaaacagatagcatccaaagttctttcatgatgttttcgggaa 475  Q
    |||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43307926 tgaatgaaatata----cggacctgatagttataggtgacaccgcaaagagtgttattaa-cagatagcatccaaagttctttcatgatgttttcgggaa 43308020  T
Q  476 ctttacaaaggtatttgtatgttttatgtcattgtatttcgatgcgttcctaaaccatatacacaactaacaagtaataccttaattgcactagtgttta 575  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43308021 ctttacaaaggtatttgtatgttttatgtcattgtatttcgatgcgttcctaaaccatatacacaactaacaagtaataccttaattgcactagtgttta 43308120  T
Q  576 ttacatgtttttctttcaaatatttatggagagggaggtgagtgggaaaaagttgatagagtgacaaagcaagaatcaaggatggtttccaaaaattaaa 675  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||  |||    
T  43308121 ttacatgtttttctttcaaatatttatggagagggaggtgagtgggaaaaagttgatagagtgacaaagcaaggatcaaggatggtttgc-aaaaggaaa 43308219  T
Q  676 agtgatcgagattgatgggtttgtaaactactttataacttaaatttaaggc-----aaatggtatttgctgcgaaattatattcctccaaaaataacga 770  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||||||||||||    
T  43308220 agtgatcgagattgatgggtttgtaaactactttataacttaaatttaaggcaaattaaatggtatttggtgcgaaattatattcctccaaaaataacga 43308319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 43307672 - 43307733
Alignment:
Q  92 acttttccatattccttgcaccaactctcaaatagtggaggtgtgatctcatccatgtactt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43307672 acttttccatattccttgcaccaactctcaaatagtggaggtgtgatctcatccatgtactt 43307733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 1429009 - 1429045
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  1429009 atgatcaatagtaattcatctagtaatgcttgcaaca 1429045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 5830220 - 5830184
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  5830220 atgatcaatagtaattcatctagtaatgcttgcaaca 5830184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 8467054 - 8467018
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  8467054 atgatcaatagtaattcatctagtaatgcttgcaaca 8467018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 9200552 - 9200516
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  9200552 atgatcaatagtaattcatctagtaatgcttgcaaca 9200516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 13956209 - 13956245
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  13956209 atgatcaatagtaattcatctagtaatgcttgcaaca 13956245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 15992387 - 15992423
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  15992387 atgatcaatagtaattcatctagtaatgcttgcaaca 15992423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 19120187 - 19120151
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19120187 atgatcaatagtaattcatctagtaatgcttgcaaca 19120151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 22973929 - 22973965
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  22973929 atgatcaatagtaattcatctagtaatgcttgcaaca 22973965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 24886415 - 24886379
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  24886415 atgatcaatagtaattcatctagtaatgcttgcaaca 24886379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 25669904 - 25669868
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  25669904 atgatcaatagtaattcatctagtaatgcttgcaaca 25669868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 27330632 - 27330596
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27330632 atgatcaatagtaattcatctagtaatgcttgcaaca 27330596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 31705459 - 31705495
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  31705459 atgatcaatagtaattcatctagtaatgcttgcaaca 31705495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 35826333 - 35826369
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  35826333 atgatcaatagtaattcatctagtaatgcttgcaaca 35826369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 38528084 - 38528120
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  38528084 atgatcaatagtaattcatctagtaatgcttgcaaca 38528120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 39573139 - 39573103
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  39573139 atgatcaatagtaattcatctagtaatgcttgcaaca 39573103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 43308507 - 43308543
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  43308507 atgatcaatagtaattcatctagtaatgcttgcaaca 43308543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 699475 - 699442
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  699475 atcaatagtaattcatctagtaatgcttgcaaca 699442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 2888292 - 2888328
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2888292 atgatcaatagtaattcatctagtaatgcttgtaaca 2888328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 5837883 - 5837847
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||| ||||||||||||||||||||||||||||    
T  5837883 atgatcaacagtaattcatctagtaatgcttgcaaca 5837847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 7693549 - 7693513
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7693549 atgaacaatagtaattcatctagtaatgcttgcaaca 7693513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 954
Target Start/End: Complemental strand, 12910679 - 12910647
Alignment:
Q  922 tcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||    
T  12910679 tcaatagtaattcatctagtaatgcttgcaaca 12910647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 17157878 - 17157914
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17157878 atgatcaataataattcatctagtaatgcttgcaaca 17157914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 22019951 - 22019915
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22019951 atgatcaatagtaattcatctagtaatgcttacaaca 22019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 22255510 - 22255474
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22255510 atgatcaatagtaattcatctagtaaggcttgcaaca 22255474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 25889698 - 25889662
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25889698 atgatcaatagtaattcatctagtaatgctttcaaca 25889662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 28416398 - 28416434
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||| ||||||||||||||||    
T  28416398 atgatcaatagtaattcatcaagtaatgcttgcaaca 28416434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 31786493 - 31786529
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31786493 atgaacaatagtaattcatctagtaatgcttgcaaca 31786529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 35511329 - 35511365
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35511329 atgatcaatagtaattcatatagtaatgcttgcaaca 35511365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 42343049 - 42343013
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||| |||||||||||||||||||||||||||    
T  42343049 atgatcaatggtaattcatctagtaatgcttgcaaca 42343013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 594 - 646
Target Start/End: Original strand, 43291615 - 43291667
Alignment:
Q  594 aatatttatggagagggaggtgagtgggaaaaagttgatagagtgacaaagca 646  Q
    ||||||||||  |||| ||| ||||||||||||||||||||||||| ||||||    
T  43291615 aatatttatgctgaggaaggagagtgggaaaaagttgatagagtgagaaagca 43291667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 783 - 852
Target Start/End: Original strand, 43308372 - 43308441
Alignment:
Q  783 aaaatagcacttctgaaaatttaaatatgnnnnnnnggaggagcttcaatggtgcagttaggaaactgac 852  Q
    ||||||||||||||| |||||||||||||          |||||||||||||||||||||||||||||||    
T  43308372 aaaatagcacttctggaaatttaaatatgttttttttagggagcttcaatggtgcagttaggaaactgac 43308441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 35504690 - 35504657
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||| |||||||||    
T  35504690 atcaatagtaattcatctagtaatacttgcaaca 35504657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 947
Target Start/End: Complemental strand, 43254183 - 43254154
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgct 947  Q
    ||||||||||||||||||||||||||||||    
T  43254183 atgatcaatagtaattcatctagtaatgct 43254154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 12237 - 12201
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  12237 atgatcaatagtaattcatctagtaatgcttgcaaca 12201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 8215 - 8179
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  8215 atgatcaatagtaattcatctagtaatgcttgcaaca 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 408286 - 408322
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  408286 atgatcaatagtaattcatctagtaatgcttgcaaca 408322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 456 - 420
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  456 atgattaatagtaattcatctagtaatgcttgcaaca 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 93957 - 93993
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  93957 atgatcaatagcaattcatctagtaatgcttgcaaca 93993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 466159 - 466123
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  466159 atgatcaatagtaattcatctagtaatgcttgcaaca 466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 1149495 - 1149531
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  1149495 atgatcaatagtaattcatctagtaatgcttgcaaca 1149531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 1149783 - 1149819
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  1149783 atgatcaatagtaattcatctagtaatgcttgcaaca 1149819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 4132549 - 4132585
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  4132549 atgatcaatagtaattcatctagtaatgcttgcaaca 4132585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 6098376 - 6098412
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  6098376 atgatcaatagtaattcatctagtaatgcttgcaaca 6098412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 7890820 - 7890856
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  7890820 atgatcaatagtaattcatctagtaatgcttgcaaca 7890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 11727351 - 11727315
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  11727351 atgatcaatagtaattcatctagtaatgcttgcaaca 11727315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 16223190 - 16223154
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  16223190 atgatcaatagtaattcatctagtaatgcttgcaaca 16223154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 16446738 - 16446774
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  16446738 atgatcaatagtaattcatctagtaatgcttgcaaca 16446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 23854294 - 23854330
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  23854294 atgatcaatagtaattcatctagtaatgcttgcaaca 23854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 33906539 - 33906503
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  33906539 atgatcaatagtaattcatctagtaatgcttgcaaca 33906503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 38644305 - 38644269
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  38644305 atgatcaatagtaattcatctagtaatgcttgcaaca 38644269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 39098982 - 39099018
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  39098982 atgatcaatagtaattcatctagtaatgcttgcaaca 39099018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 43643458 - 43643494
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  43643458 atgatcaatagtaattcatctagtaatgcttgcaaca 43643494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 12587909 - 12587875
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  12587909 atgatcaatagtaattcatctagtaatgcttgcaa 12587875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 44869824 - 44869790
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  44869824 atgatcaatagtaattcatctagtaatgcttgcaa 44869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 1205254 - 1205218
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1205254 atgatcaatagtaattcatctagtaatacttgcaaca 1205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 5299809 - 5299845
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  5299809 atgattaatagtaattcatctagtaatgcttgcaaca 5299845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 24823257 - 24823293
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24823257 atgaacaatagtaattcatctagtaatgcttgcaaca 24823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 33198129 - 33198093
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33198129 atgatcaatagtaattcatctagtgatgcttgcaaca 33198093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 34895289 - 34895253
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34895289 atgatcaatagtaattcatatagtaatgcttgcaaca 34895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 35459574 - 35459610
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  35459574 atgatcaatagtaattcatctagtaatgtttgcaaca 35459610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 35859261 - 35859225
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35859261 atgatcaatattaattcatctagtaatgcttgcaaca 35859225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 37970382 - 37970418
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||| ||||||||||||||||||||||||||||    
T  37970382 atgatcaacagtaattcatctagtaatgcttgcaaca 37970418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 1953851 - 1953885
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||| ||||||||||||    
T  1953851 atgatcaatagtaattcatctaataatgcttgcaa 1953885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 924 - 954
Target Start/End: Complemental strand, 40862740 - 40862710
Alignment:
Q  924 aatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||    
T  40862740 aatagtaattcatctagtaatgcttgcaaca 40862710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 5657339 - 5657375
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  5657339 atgatcaatagtaattcatctagtaatgcttgcaaca 5657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 12166046 - 12166010
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  12166046 atgatcaatagtaattcatctagtaatgcttgcaaca 12166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 15672617 - 15672653
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  15672617 atgatcaatagtaattcatctagtaatgcttgcaaca 15672653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 18797630 - 18797594
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  18797630 atgatcaatagtaattcatctagtaatgcttgcaaca 18797594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 27284047 - 27284011
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27284047 atgatcaatagtaattcatctagtaatgcttgcaaca 27284011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 29173825 - 29173789
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  29173825 atgatcaatagtaattcatctagtaatgcttgcaaca 29173789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 30055830 - 30055794
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  30055830 atgatcaatagtaattcatctagtaatgcttgcaaca 30055794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 31578922 - 31578958
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  31578922 atgatcaatagtaattcatctagtaatgcttgcaaca 31578958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 37110177 - 37110141
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  37110177 atgatcaatagtaattcatctagtaatgcttgcaaca 37110141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 950
Target Start/End: Complemental strand, 6546822 - 6546790
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgc 950  Q
    |||||||||||||||||||||||||||||||||    
T  6546822 atgatcaatagtaattcatctagtaatgcttgc 6546790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 7335096 - 7335060
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7335096 atgattaatagtaattcatctagtaatgcttgcaaca 7335060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 9355684 - 9355720
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9355684 atgatcaatagcaattcatctagtaatgcttgcaaca 9355720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 11071506 - 11071470
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  11071506 atgatcaatagtaattcatctagtaatgtttgcaaca 11071470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 17842442 - 17842478
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  17842442 atgatcaatagtaattcatctaataatgcttgcaaca 17842478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 22687534 - 22687498
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22687534 atgatcaatagtaattcatctattaatgcttgcaaca 22687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 25691402 - 25691438
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  25691402 atgatcaatagtaattcatctagtaatgtttgcaaca 25691438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 26587950 - 26587986
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26587950 atgatcaatagtaattcatctagtaatgcctgcaaca 26587986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 31520599 - 31520635
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31520599 atgatcaatagtaattcatcgagtaatgcttgcaaca 31520635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 32820911 - 32820947
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32820911 atgattaatagtaattcatctagtaatgcttgcaaca 32820947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 33688120 - 33688156
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33688120 atgatcaatagcaattcatctagtaatgcttgcaaca 33688156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 35353411 - 35353375
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35353411 atgatcaatagtgattcatctagtaatgcttgcaaca 35353375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 37703356 - 37703392
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  37703356 atgatcaatagtaattcatctagtaatgtttgcaaca 37703392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 37704485 - 37704449
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||| |||||||||||||||    
T  37704485 atgatcaatagtaattcatctggtaatgcttgcaaca 37704449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 43925398 - 43925362
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43925398 atgattaatagtaattcatctagtaatgcttgcaaca 43925362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 46480987 - 46481023
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  46480987 atgatcaatagtaattcatctagtaatgtttgcaaca 46481023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 48928155 - 48928191
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  48928155 atgatcaatagtaattcatctagtaatgtttgcaaca 48928191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 920 - 954
Target Start/End: Complemental strand, 10481906 - 10481872
Alignment:
Q  920 gatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||| |||||||||    
T  10481906 gatcaatagtaattcatctagtaatacttgcaaca 10481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 37347324 - 37347290
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||| ||||||||||||||    
T  37347324 atgatcaatagtaattcatcgagtaatgcttgcaa 37347290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 24212045 - 24212008
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  24212045 atgatcaatagtatattcatctagtaatgcttgcaaca 24212008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 3879795 - 3879831
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  3879795 atgatcaatagtaattcatctagtaatgcttgcaaca 3879831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 4318678 - 4318714
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  4318678 atgatcaatagtaattcatctagtaatgcttgcaaca 4318714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 6091038 - 6091074
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  6091038 atgatcaatagtaattcatctagtaatgcttgcaaca 6091074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 20768410 - 20768374
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  20768410 atgatcaatagtaattcatctagtaatgcttgcaaca 20768374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 33619158 - 33619122
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  33619158 atgatcaatagtaattcatctagtaatgcttgcaaca 33619122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 8513556 - 8513522
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  8513556 atgatcaatagtaattcatctagtaatgcttgcaa 8513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 6089231 - 6089195
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6089231 atgatcaatagtaattcatatagtaatgcttgcaaca 6089195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 7234891 - 7234927
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  7234891 atgatcaatagtaattcatctagtaatgtttgcaaca 7234927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 21016974 - 21017010
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  21016974 atgattaatagtaattcatctagtaatgcttgcaaca 21017010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 1792427 - 1792398
Alignment:
Q  172 caagcatcaaacttgaagccaacaatggaa 201  Q
    ||||||||||||||||||||||||||||||    
T  1792427 caagcatcaaacttgaagccaacaatggaa 1792398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 6864363 - 6864327
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  6864363 atgatcaatagtaattcatctagtaatgcttgcaaca 6864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 17272292 - 17272256
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  17272292 atgatcaatagtaattcatctagtaatgcttgcaaca 17272256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 19089336 - 19089372
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19089336 atgatcaatagtaattcatctagtaatgcttgcaaca 19089372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 19440531 - 19440567
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19440531 atgatcaatagtaattcatctagtaatgcttgcaaca 19440567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 25184441 - 25184405
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  25184441 atgatcaatagtaattcatctagtaatgcttgcaaca 25184405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 27396944 - 27396908
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27396944 atgatcaatagtaattcatctagtaatgcttgcaaca 27396908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 29584083 - 29584119
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  29584083 atgatcaatagtaattcatctagtaatgcttgcaaca 29584119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 30002524 - 30002560
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  30002524 atgatcaatagtaattcatctagtaatgcttgcaaca 30002560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 35025449 - 35025485
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  35025449 atgatcaatagtaattcatctagtaatgcttgcaaca 35025485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 37663624 - 37663660
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  37663624 atgatcaatagtaattcatctagtaatgcttgcaaca 37663660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 37775986 - 37775950
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  37775986 atgatcaatagtaattcatctagtaatgcttgcaaca 37775950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 46883997 - 46884033
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  46883997 atgatcaatagtaattcatctagtaatgcttgcaaca 46884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 47254068 - 47254032
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  47254068 atgatcaatagtaattcatctagtaatgcttgcaaca 47254032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 50765048 - 50765012
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  50765048 atgatcaatagtaattcatctagtaatgcttgcaaca 50765012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 879431 - 879467
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  879431 atgatcaataataattcatctagtaatgcttgcaaca 879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 7703837 - 7703801
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7703837 atgataaatagtaattcatctagtaatgcttgcaaca 7703801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 9139557 - 9139521
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9139557 atgatcaatagtaattcgtctagtaatgcttgcaaca 9139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 23431883 - 23431847
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23431883 atgatcaatagtaattcatctactaatgcttgcaaca 23431847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 23761399 - 23761363
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23761399 atgatcaataataattcatctagtaatgcttgcaaca 23761363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 32579774 - 32579738
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  32579774 atgatcaatagtaattcatctagtaatgtttgcaaca 32579738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 33341726 - 33341690
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33341726 atgatcaatagtaattcatctagtaatgcttacaaca 33341690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 33816399 - 33816435
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33816399 atgatcaatagtaattcatctagtaatgtttgcaaca 33816435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 39400336 - 39400300
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||| ||||||||||||||||||||||||    
T  39400336 atgatcaatagtcattcatctagtaatgcttgcaaca 39400300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 46888041 - 46888077
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||| ||||    
T  46888041 atgatcaatagtaattcatctagtaatgcttgtaaca 46888077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 50697570 - 50697534
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||| |||||    
T  50697570 atgatcaatagtaattcatctagtaatgcttacaaca 50697534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 55477774 - 55477810
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  55477774 atgattaatagtaattcatctagtaatgcttgcaaca 55477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 7152087 - 7152121
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||| ||||||||||||    
T  7152087 atgatcaatagtaattcatctaataatgcttgcaa 7152121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 920 - 954
Target Start/End: Original strand, 34947980 - 34948014
Alignment:
Q  920 gatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||    
T  34947980 gatcaatagtatttcatctagtaatgcttgcaaca 34948014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 36493572 - 36493606
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||| ||||||||||||||    
T  36493572 atgatcaatagtaattcatcgagtaatgcttgcaa 36493606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 3042944 - 3042911
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||| ||||||||||||||||||||||||||    
T  3042944 atcaatactaattcatctagtaatgcttgcaaca 3042911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 32912462 - 32912499
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32912462 atgatcaatagtatattcatctagtaatgcttgcaaca 32912499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 34361374 - 34361411
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34361374 atgatcaatagtatattcatctagtaatgcttgcaaca 34361411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 4015778 - 4015742
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  4015778 atgatcaatagtaattcatctagtaatgcttgcaaca 4015742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 11357238 - 11357274
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  11357238 atgatcaatagtaattcatctagtaatgcttgcaaca 11357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 22622575 - 22622611
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  22622575 atgatcaatagtaattcatctagtaatgcttgcaaca 22622611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 26941117 - 26941153
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  26941117 atgatcaatagtaattcatctagtaatgcttgcaaca 26941153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 42505932 - 42505968
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  42505932 atgatcaatagtaattcatctagtaatgcttgcaaca 42505968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 46297619 - 46297655
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  46297619 atgatcaatagtaattcatctagtaatgcttgcaaca 46297655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 51212628 - 51212664
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  51212628 atgatcaatagtaattcatctagtaatgcttgcaaca 51212664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 1090012 - 1089978
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  1090012 atgatcaatagtaattcatctagtaatgcttgcaa 1089978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 25580058 - 25580024
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  25580058 atgatcaatagtaattcatctagtaatgcttgcaa 25580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 46994518 - 46994552
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  46994518 atgatcaatagtaattcatctagtaatgcttgcaa 46994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 918 - 951
Target Start/End: Complemental strand, 36012458 - 36012425
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgca 951  Q
    ||||||||||||||||||||||||||||||||||    
T  36012458 atgatcaatagtaattcatctagtaatgcttgca 36012425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Original strand, 40552119 - 40552152
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  40552119 atcaatagtaattcatctagtaatgcttgcaaca 40552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 3362574 - 3362538
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3362574 atgatcaatagtaattcatccagtaatgcttgcaaca 3362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 7327339 - 7327375
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7327339 atgattaatagtaattcatctagtaatgcttgcaaca 7327375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 22451287 - 22451251
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22451287 atgatcaataataattcatctagtaatgcttgcaaca 22451251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 29099665 - 29099629
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29099665 atgatcaatggtaattcatctagtaatgcttgcaaca 29099629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 29164128 - 29164092
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29164128 atgatcaatagtaattcatctagtaatgcttgtaaca 29164092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 32373789 - 32373753
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  32373789 atgatcaatagaaattcatctagtaatgcttgcaaca 32373753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 33378642 - 33378678
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33378642 atgatcaatagtaattcatctagtaatgtttgcaaca 33378678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 39282971 - 39282935
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39282971 atgattaatagtaattcatctagtaatgcttgcaaca 39282935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 40936292 - 40936256
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40936292 atgatcaatagtaatttatctagtaatgcttgcaaca 40936256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 44186374 - 44186410
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44186374 atgatcaatagtaatttatctagtaatgcttgcaaca 44186410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 44891816 - 44891780
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||| ||||||||||||||||||||||||||||    
T  44891816 atgatcaacagtaattcatctagtaatgcttgcaaca 44891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 954
Target Start/End: Complemental strand, 45174821 - 45174789
Alignment:
Q  922 tcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||    
T  45174821 tcaatagtaattcatctagtaatgcttgcaaca 45174789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 50475130 - 50475094
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  50475130 atgatcaatactaattcatctagtaatgcttgcaaca 50475094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 53229009 - 53229045
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||| ||||||||||||||||||||||||||    
T  53229009 atgatcaatactaattcatctagtaatgcttgcaaca 53229045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 54828558 - 54828594
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||| ||||||||||||||||||||    
T  54828558 atgatcaatagtaatttatctagtaatgcttgcaaca 54828594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 33698472 - 33698438
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||| ||||||||||||||||||||||||    
T  33698472 atgatcaatattaattcatctagtaatgcttgcaa 33698438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 43975749 - 43975783
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||| ||||||||||||||||||||||||    
T  43975749 atgatcaatattaattcatctagtaatgcttgcaa 43975783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 21009658 - 21009695
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21009658 atgatcaatagtatattcatctagtaatgcttgcaaca 21009695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 47481842 - 47481805
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  47481842 atgatcaatagtatattcatctagtaatgcttgcaaca 47481805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 54506127 - 54506090
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  54506127 atgatcaatagtatattcatctagtaatgcttgcaaca 54506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 5881857 - 5881821
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  5881857 atgatcaatagtaattcatctagtaatgcttgcaaca 5881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 19314175 - 19314139
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19314175 atgatcaatagtaattcatctagtaatgcttgcaaca 19314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 19424517 - 19424553
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19424517 atgatcaatagtaattcatctagtaatgcttgcaaca 19424553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 19500790 - 19500826
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  19500790 atgatcaatagtaattcatctagtaatgcttgcaaca 19500826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 26357905 - 26357869
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  26357905 atgatcaatagtaattcatctagtaatgcttgcaaca 26357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 27349823 - 27349859
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27349823 atgatcaatagtaattcatctagtaatgcttgcaaca 27349859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 33660252 - 33660288
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  33660252 atgatcaatagtaattcatctagtaatgcttgcaaca 33660288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 33709107 - 33709143
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  33709107 atgatcaatagtaattcatctagtaatgcttgcaaca 33709143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 35959220 - 35959184
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  35959220 atgatcaatagtaattcatctagtaatgcttgcaaca 35959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 41961168 - 41961132
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  41961168 atgatcaatagtaattcatctagtaatgcttgcaaca 41961132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 19289198 - 19289232
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  19289198 atgatcaatagtaattcatctagtaatgcttgcaa 19289232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Original strand, 2325256 - 2325289
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  2325256 atcaatagtaattcatctagtaatgcttgcaaca 2325289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 4478693 - 4478657
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4478693 atgatcaatagcaattcatctagtaatgcttgcaaca 4478657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 7006813 - 7006849
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7006813 atgatcaatagaaattcatctagtaatgcttgcaaca 7006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 31570609 - 31570645
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31570609 atgatcaatagtaattcatctagcaatgcttgcaaca 31570645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 43770723 - 43770759
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43770723 atgatcaatagaaattcatctagtaatgcttgcaaca 43770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 4763959 - 4763925
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||| ||||||||||||||||    
T  4763959 atgatcaatagtaattcaactagtaatgcttgcaa 4763925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 11366255 - 11366292
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11366255 atgatcaatagtatattcatctagtaatgcttgcaaca 11366292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 921 - 954
Target Start/End: Original strand, 33550865 - 33550898
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||| ||||||||||||||||||||||||    
T  33550865 atcaatagttattcatctagtaatgcttgcaaca 33550898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 2960072 - 2960036
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  2960072 atgatcaatagtaattcatctagtaatgcttgcaaca 2960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 3535247 - 3535211
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  3535247 atgatcaatagtaattcatctagtaatgcttgcaaca 3535211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 10923051 - 10923015
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  10923051 atgatcaatagtaattcatctagtaatgcttgcaaca 10923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 11742220 - 11742256
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  11742220 atgatcaatagtaattcatctagtaatgcttgcaaca 11742256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 14758356 - 14758320
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  14758356 atgatcaatagtaattcatctagtaatgcttgcaaca 14758320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 27227337 - 27227373
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27227337 atgatcaatagtaattcatctagtaatgcttgcaaca 27227373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 27532833 - 27532869
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  27532833 atgatcaatagtaattcatctagtaatgcttgcaaca 27532869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 30326804 - 30326840
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  30326804 atgatcaatagtaattcatctagtaatgcttgcaaca 30326840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 38823538 - 38823502
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  38823538 atgatcaatagtaattcatctagtaatgcttgcaaca 38823502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 51129183 - 51129147
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||||||    
T  51129183 atgatcaatagtaattcatctagtaatgcttgcaaca 51129147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 3309477 - 3309443
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||||||||||    
T  3309477 atgatcaatagtaattcatctagtaatgcttgcaa 3309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 15383254 - 15383221
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  15383254 atcaatagtaattcatctagtaatgcttgcaaca 15383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Original strand, 27267055 - 27267088
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  27267055 atcaatagtaattcatctagtaatgcttgcaaca 27267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 30254744 - 30254711
Alignment:
Q  921 atcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||||||||||||||    
T  30254744 atcaatagtaattcatctagtaatgcttgcaaca 30254711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 238365 - 238401
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||| |||||||||||||||||||||||||||||||    
T  238365 atgattaatagtaattcatctagtaatgcttgcaaca 238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 1547595 - 1547559
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1547595 atgatcaatggtaattcatctagtaatgcttgcaaca 1547559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 4330605 - 4330569
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4330605 atgatcaattgtaattcatctagtaatgcttgcaaca 4330569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 954
Target Start/End: Original strand, 10181863 - 10181895
Alignment:
Q  922 tcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||    
T  10181863 tcaatagtaattcatctagtaatgcttgcaaca 10181895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 15168420 - 15168384
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15168420 atgatcaatagtaattcatctaataatgcttgcaaca 15168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 16415970 - 16415934
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  16415970 atgatcaatagtaattcatctaataatgcttgcaaca 16415934  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 18422975 - 18422939
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||||||| |||||||||||||    
T  18422975 atgatcaatagtaattcatctagcaatgcttgcaaca 18422939  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 25160956 - 25160920
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  25160956 atgatcaatagtaattcatatagtaatgcttgcaaca 25160920  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 28564635 - 28564671
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28564635 atgatcaatagtaattcatctagtaatgtttgcaaca 28564671  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 32216379 - 32216343
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32216379 atgatcaatagtaattcatctaataatgcttgcaaca 32216343  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 954
Target Start/End: Complemental strand, 32267354 - 32267322
Alignment:
Q  922 tcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||||||||    
T  32267354 tcaatagtaattcatctagtaatgcttgcaaca 32267322  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 34012234 - 34012270
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34012234 atgatcaatagtaattcatatagtaatgcttgcaaca 34012270  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 37451609 - 37451573
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  37451609 atgatcaatagtaattcatctagtaatgtttgcaaca 37451573  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 39393708 - 39393672
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39393708 atgatcaatagtaattcatctagtaatgtttgcaaca 39393672  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 40885137 - 40885101
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40885137 atgatcaatagtaattcatctagtaatgtttgcaaca 40885101  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 47682346 - 47682382
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaaca 954  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47682346 atgatcaatagtaattcatttagtaatgcttgcaaca 47682382  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 918 - 949
Target Start/End: Complemental strand, 41926480 - 41926449
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttg 949  Q
    ||||||||||||||||||||||||||||||||    
T  41926480 atgatcaatagtaattcatctagtaatgcttg 41926449  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Original strand, 7078915 - 7078949
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||||||||||||||||||||| ||||||    
T  7078915 atgatcaatagtaattcatctagtaatgtttgcaa 7078949  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 918 - 952
Target Start/End: Complemental strand, 48353866 - 48353832
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgcaa 952  Q
    |||||||||| ||||||||||||||||||||||||    
T  48353866 atgatcaataataattcatctagtaatgcttgcaa 48353832  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 951
Target Start/End: Original strand, 9902906 - 9902939
Alignment:
Q  918 atgatcaatagtaattcatctagtaatgcttgca 951  Q
    ||||||||||||||||||||||||| ||||||||    
T  9902906 atgatcaatagtaattcatctagtagtgcttgca 9902939  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Original strand, 19899620 - 19899657
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19899620 atgatcaatagtatattcatctagtaatgcttgcaaca 19899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 918 - 954
Target Start/End: Complemental strand, 23999672 - 23999635
Alignment:
Q  918 atgatcaatagta-attcatctagtaatgcttgcaaca 954  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  23999672 atgatcaatagtatattcatctagtaatgcttgcaaca 23999635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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