View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0916_low_6 (Length: 528)
Name: NF0916_low_6
Description: NF0916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0916_low_6 |
 |  |
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[»] scaffold1063 (1 HSPs) |
 |  |  |
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[»] scaffold0262 (1 HSPs) |
 |  |  |
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[»] scaffold1763 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 6162893 - 6162687
Alignment:
Q |
29 |
acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacgtctgcattaacccaattagcccaagttgtcaaaccacttct |
128 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6162893 |
acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttct |
6162794 |
T |
 |
Q |
129 |
gaaagcttccatacgatccatgtctttcactatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgca |
228 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||| ||||| ||| |
|
|
T |
6162793 |
gaaagcttccatacgatccatgtctttcactatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgca |
6162694 |
T |
 |
Q |
229 |
tgttaac |
235 |
Q |
|
|
||||||| |
|
|
T |
6162693 |
tgttaac |
6162687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 6137735 - 6137615
Alignment:
Q |
41 |
taggagaaattccttggaaaagaactttggttttgtttgtatcaacgtctgcattaacccaattagcccaagttgtcaaaccacttctgaaagcttccat |
140 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |
|
|
T |
6137735 |
taggagaaattccttggaaaagaactttggttttgcttgtatcaacttctgcattaacccagttagcccaagttgtcaaaccagttctaaaagcttccat |
6137636 |
T |
 |
Q |
141 |
acgatccatgtctttcactat |
161 |
Q |
|
|
||||||||||||||||||||| |
|
|
T |
6137635 |
acgatccatgtctttcactat |
6137615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 6131944 - 6131812
Alignment:
Q |
29 |
acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacgtctgcattaacccaattagcccaagttgtcaaaccacttct |
128 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |
|
|
T |
6131944 |
acttgtagtgcataggagaaattccttgaaaaagaactttggttttgcttgtatcaacctctttattaacccagttagcccaagttgtcaaaccagttcg |
6131845 |
T |
 |
Q |
129 |
gaaagcttccatacgatccatgtctttcactat |
161 |
Q |
|
|
|||||||||||||||||||||||||||||||| |
|
|
T |
6131844 |
aaaagcttccatacgatccatgtctttcactat |
6131812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 13284738 - 13284870
Alignment:
Q |
29 |
acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacgtctgcattaacccaattagcccaagttgtcaaaccacttct |
128 |
Q |
|
|
|||||||||| | |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
13284738 |
acttgtagtgtacaggagaaattccttggaaaagaactttggttttgcttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccagttct |
13284837 |
T |
 |
Q |
129 |
gaaagcttccatacgatccatgtctttcactat |
161 |
Q |
|
|
|||||||||||| | ||||| ||||||||||| |
|
|
T |
13284838 |
aaaagcttccatatggtccatctctttcactat |
13284870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 432
Target Start/End: Complemental strand, 53782349 - 53782276
Alignment:
Q |
359 |
tttctcttaaaggccagcagcctggtccaatccaagtggggtgtggtcaaatatacattactacacaagcaaca |
432 |
Q |
|
|
||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
53782349 |
tttctcttaaaaggcagcagcctggtccaatccaagtggggtgtggtcaaagatacattactatacaagcaaca |
53782276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 339
Target Start/End: Complemental strand, 54529034 - 54528855
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgcaacataag-tatgtcatgct |
260 |
Q |
|
|
||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||| ||||| |||||||||| ||||||| | || || ||| || |
|
|
T |
54529034 |
gaattctgctctttaccaaaatgattttgctcattctcaatgtaaatgtccaaaatacccctacacatgttaactcacgcaacctgagttaattcacact |
54528935 |
T |
 |
Q |
261 |
agtgttaaattttcgtgagttaattcacgctgcatgacttaagtcacac-aaaagaaaaacacactaaaacccagcgtga |
339 |
Q |
|
|
| |||||||||| | ||||||| ||||| | ||||||||||||| ||| |||| ||||||| ||||||||||||||||| |
|
|
T |
54528934 |
aatgttaaatttgtgggagttaactcacgtttcatgacttaagtcgcacaaaaaaaaaaacaaactaaaacccagcgtga |
54528855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 44833470 - 44833543
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |||| ||||| |
|
|
T |
44833470 |
gaattctgctcattacccaaatggttccgtttatttccaaagtaaaagtccaaaatgcccctacgcatattaac |
44833543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 47064863 - 47064942
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
|||||| ||||||||||||||||| || || ||||| |||||||||| ||||||||| |||| ||||||||||||||| |
|
|
T |
47064863 |
tgaattatgctcattacccaaatgattctgctcattcccaaagtaaaagtccaaaatgctcctacgcatgttaacttacg |
47064942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 53827742 - 53827666
Alignment:
Q |
159 |
tatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||| |||| || | ||||| |||||||||||||||||||| ||||| |||||||||| |
|
|
T |
53827742 |
tatgaattctgctcattacctaaatagtatcgctcattcccaaagtaaatgtccaaaatgcccctacgcatgttaac |
53827666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 4969875 - 4969937
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatcccta |
224 |
Q |
|
|
|||||||||||||||||||||||||| | ||||| |||||||||| ||| |||||| ||||| |
|
|
T |
4969875 |
gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtcgaaaataccccta |
4969937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 11342887 - 11342969
Alignment:
Q |
159 |
tatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||| ||||| ||||||||| |||||| |
|
|
T |
11342887 |
tatgaattctgctcattgttcaaatggttccgttcattcccaaagtaaaagtccaaaaagcccctacgcatgttaatttacgc |
11342969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 3539666 - 3539742
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
||||||| ||||| ||| |||||||||| || ||||||||||| |||||| ||||||| ||||| |||||||||| |
|
|
T |
3539666 |
atgaattatgctctttatccaaatggttttgctcatttccaaaataaatgatcaaaatagccctacacatgttaact |
3539742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 53814639 - 53814567
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaa |
234 |
Q |
|
|
|||||||||||||||||||||||| | | ||||| |||||||||||| |||||| ||||| ||||||||| |
|
|
T |
53814639 |
gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgatcaaaatgcccctacgcatgttaa |
53814567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 30533957 - 30533882
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
|||||||||||| |||| | || |||| || |||||| |||||||||| ||||||||| ||||| |||||||||| |
|
|
T |
30533957 |
tgaattctgctctttactcgaacggttttgctcattttcaaagtaaatatccaaaatacccctacacatgttaact |
30533882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 15040681 - 15040754
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||| | | ||||| |||||||||||| | |||| ||||| |||||||||| |
|
|
T |
15040681 |
gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgactgaaatgcccctacgcatgttaac |
15040754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 44430418 - 44430463
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaa |
207 |
Q |
|
|
||||||||||||||| |||||||||| || ||||| |||||||||| |
|
|
T |
44430418 |
gaattctgctcattatccaaatggttttgctcattcccaaagtaaa |
44430463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 44836556 - 44836483
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||| | |||||||| | ||||||| |||||||||||||| | | ||||| |||||||||| |
|
|
T |
44836556 |
gaattctgctcattatctaaatggttccgctcatttctaaagtaaatgtccatattgcccctacgcatgttaac |
44836483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 13843670 - 13843626
Alignment:
Q |
163 |
aattctgctcattacccaaatggttatgttcatttccaaagtaaa |
207 |
Q |
|
|
||||||||||||||||||||||||| | ||||| |||||||||| |
|
|
T |
13843670 |
aattctgctcattacccaaatggtttcgctcattcccaaagtaaa |
13843626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 340 - 447
Target Start/End: Complemental strand, 2094321 - 2094211
Alignment:
Q |
340 |
ttaacttacgctggttttgtttctcttaaaggccagcagcctggtccaatccaagtggggtgtggtc--aaatatacattactacacaagcaacaacaa- |
436 |
Q |
|
|
|||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |
|
|
T |
2094321 |
ttaactcacgctggttttgtttctcataaaagccagcagcctggtccaatccaagtggggtgtgatcaaaaatatacattactatacaagcaacaacaac |
2094222 |
T |
 |
Q |
437 |
ccaagaataat |
447 |
Q |
|
|
||||||||||| |
|
|
T |
2094221 |
ccaagaataat |
2094211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 2094441 - 2094366
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||| |||| |||||| |
|
|
T |
2094441 |
tgaattctgctcattacccaaattgttctgctcatttccaaagtaaatgtctaaaatatccctacgcatattaact |
2094366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 11821158 - 11821238
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||| |
|
|
T |
11821158 |
atgaattctgctcattatccaaatggtttcgttcattcccaaagtaaaagtccaaaatgctcctatgcatgttaacttacg |
11821238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 3792559 - 3792633
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||| || || |||||||||| |
|
|
T |
3792559 |
tgaattctgctcattacccaaatagtttcgctcatttccaaagtaaaagtccaaaatgcccttacgcatgttaac |
3792633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 39650195 - 39650269
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||| |||||||| | ||||| | |||||||||||||||||| ||||| |||||||||| |
|
|
T |
39650195 |
tgaattctgctcattacctaaatggtttcgctcattcctaaagtaaatgtccaaaatgcccctacgcatgttaac |
39650269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 37260991 - 37260911
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgca |
242 |
Q |
|
|
||||| ||||| ||||||||| |||| || |||| ||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
T |
37260991 |
gaattatgctctttacccaaacggttttgcccattctcaaagtaaatgtccaaaatgcccctatgcatgttaactcacgca |
37260911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 42883831 - 42883751
Alignment:
Q |
163 |
aattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgcaa |
243 |
Q |
|
|
|||| ||||| ||| | |||||||| || ||||||| ||| ||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
42883831 |
aattatgctctttagctaaatggttttgctcatttctaaaataaatgtccaaaatatccctacacatgttaactcacgcaa |
42883751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 5602943 - 5602999
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaat |
217 |
Q |
|
|
|||||||||||| |||||||||||| | || ||||| |||||||||||| ||||||| |
|
|
T |
5602943 |
tgaattctgctctttacccaaatggatttgctcattcccaaagtaaatgaccaaaat |
5602999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 35392183 - 35392108
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
|||| ||||||| |||||||||| ||| || ||||| ||||||||||||| ||||||| ||| ||||||||||| |
|
|
T |
35392183 |
tgaactctgctctttacccaaattgttttgctcattcccaaagtaaatgttcaaaatacttctacgcatgttaact |
35392108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 35391487 - 35391549
Alignment:
Q |
174 |
ttacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
||||| |||||||| ||||||| ||||||||||||||||||||| | || ||||||||||| |
|
|
T |
35391487 |
ttacctaaatggtttcgttcattcccaaagtaaatgtccaaaatactcatacgcatgttaact |
35391549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 33617644 - 33617717
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||| |||||||||||||||||| | | ||||| ||||||||||| || |||| |||||||||||||||| |
|
|
T |
33617644 |
gaattatgctcattacccaaatggattcgctcattctcaaagtaaatgaccgaaatgcccctatgcatgttaac |
33617717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 49033808 - 49033755
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaa |
215 |
Q |
|
|
||||||||||||||| ||||||||| | ||||| |||||||||||||||||| |
|
|
T |
49033808 |
gaattctgctcattattcaaatggttccgctcattcccaaagtaaatgtccaaa |
49033755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 3792296 - 3792352
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
||||||||||||||||||||||| || | ||||| |||| ||||||||||||||| |
|
|
T |
3792296 |
gaattctgctcattacccaaatgattctactcattctcaaaataaatgtccaaaata |
3792352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 159 - 332
Target Start/End: Complemental strand, 17644681 - 17644507
Alignment:
Q |
159 |
tatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgcaacataag-tatgtcat |
257 |
Q |
|
|
|||||||| ||||||||||| |||||| | | ||||| ||||||||||||||||||||| ||||| ||||||||| | |||||| | ||| || ||| |
|
|
T |
17644681 |
tatgaattgtgctcattaccgaaatggattcgctcattcccaaagtaaatgtccaaaatacccctacgcatgttaattcacgcaataaaagttaactcac |
17644582 |
T |
 |
Q |
258 |
gctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcacacaaaagaaaaacacactaaaaccc |
332 |
Q |
|
|
||||||||||||||| | |||||||| ||||||||| |||||||| |||| || || || |||||||||||||| |
|
|
T |
17644581 |
gctagtgttaaatttacatgagttaactcacgctgcgtgacttaaatcacgcagaaaaatcacacactaaaaccc |
17644507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 7164274 - 7164355
Alignment:
Q |
258 |
gctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcacacaaaagaaaaacacactaaaacccagcgtga |
339 |
Q |
|
|
|||| |||||||||| | ||||||||||||||| || ||||||||||||| || || ||| ||||||||||||||| ||||| |
|
|
T |
7164274 |
gctaatgttaaatttgcatgagttaattcacgccgcgtgacttaagtcacgcagaaaaaacacacactaaaacccaacgtga |
7164355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 11135741 - 11135820
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||| ||||| ||||||||||| || | ||||||||||| |||||| |||||||| ||||| |||||||||||||||| |
|
|
T |
11135741 |
gaattatgctctttacccaaatgatttcgctcatttccaaaataaatgaccaaaatacccctacgcatgttaacttacgc |
11135820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 6636980 - 6636919
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccct |
223 |
Q |
|
|
||||||||||||||| ||||||| |||||||||| ||||| |||||| ||||||||||||| |
|
|
T |
6636980 |
gaattctgctcattatccaaatgaatatgttcattcccaaaataaatgaccaaaatatccct |
6636919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 1145886 - 1145776
Alignment:
Q |
230 |
gttaacttacgcaacataagt-atgtcatgctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcacacaaaagaaaaacacactaaa |
328 |
Q |
|
|
|||||||||||| |||| ||| | ||| |||| ||| |||||| | |||||||| ||||||||| || |||||||||| || || ||| |||||| ||| |
|
|
T |
1145886 |
gttaacttacgctacattagttaactcacgctaatgtaaaatttgcatgagttaactcacgctgcgtgtcttaagtcacgcagaaaaaatacacaccaaa |
1145787 |
T |
 |
Q |
329 |
acccagcgtga |
339 |
Q |
|
|
||||||||||| |
|
|
T |
1145786 |
acccagcgtga |
1145776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 3458013 - 3458070
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
|||||||||||||||||| ||| || || ||||||||||||||||||||||||||| |
|
|
T |
3458013 |
tgaattctgctcattaccgaaaccgtattgctcatttccaaagtaaatgtccaaaata |
3458070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 25787920 - 25787864
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaat |
217 |
Q |
|
|
|||||||||||| ||| ||||| ||||||| ||||||||||| |||||| ||||||| |
|
|
T |
25787920 |
tgaattctgctctttatccaaacggttatgctcatttccaaaataaatgaccaaaat |
25787864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 30491869 - 30491798
Alignment:
Q |
166 |
tctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaactt |
237 |
Q |
|
|
||||||||||||||||||| | | ||||| |||||||||| ||| ||||| |||||| |||||||||||| |
|
|
T |
30491869 |
tctgctcattacccaaatgaattcgctcattcccaaagtaaaagtcgaaaatgtccctacgcatgttaactt |
30491798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 34017698 - 34017635
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatcccta |
224 |
Q |
|
|
||||||||||||||||| ||||||||| | |||||| ||||||||||| || ||||| ||||| |
|
|
T |
34017698 |
tgaattctgctcattactcaaatggttccgctcattttcaaagtaaatgaccgaaataccccta |
34017635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 36580219 - 36580298
Alignment:
Q |
158 |
ctatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaactt |
237 |
Q |
|
|
|||||||||||||||||||| |||||||| | | ||||| ||| |||| || ||||||||||||| ||||||||||| |
|
|
T |
36580219 |
ctatgaattctgctcattacttaaatggttccgcttatttctaaaataaaagttcaaaatatccctacacatgttaactt |
36580298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 25760591 - 25760509
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgcaac |
244 |
Q |
|
|
||||||||||| ||||||||| ||||||| || || | |||||||||| |||||||||||| || ||||||| ||||||| |
|
|
T |
25760591 |
gaattctgctctttacccaaacggttatgctcgttccaaaagtaaatgatcaaaatatccctgtgtgagttaactcacgcaac |
25760509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 3759632 - 3759583
Alignment:
Q |
192 |
tcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||||||||| |||||| |||||||| |||||| |||||||||| |||| |
|
|
T |
3759632 |
tcatttccaaaataaatgaccaaaataaccctattcatgttaactcacgc |
3759583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 40266588 - 40266539
Alignment:
Q |
258 |
gctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcac |
307 |
Q |
|
|
|||| |||||||||| |||||||||| ||||||| | ||||||||||||| |
|
|
T |
40266588 |
gctaatgttaaatttgcgtgagttaactcacgctacgtgacttaagtcac |
40266539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 6159021 - 6158942
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||||||||||||||| |||||| | | ||||| |||||||||||||| |||||| ||||| | ||||||||| |||| |
|
|
T |
6159021 |
tgaattctgctcattacttaaatggattcgctcattcccaaagtaaatgtctaaaata-ccctacgtatgttaactcacgc |
6158942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 37893087 - 37893008
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||||||| ||||||||||||||| | ||||| |||||||||| ||||||||| ||||||||||||||||||||| |
|
|
T |
37893087 |
tgaattctgctaattacccaaatggtttcgctcattcccaaagtaaaagtccaaaatgcccctatgcatgttaacttacg |
37893008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 22788063 - 22788001
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatcccta |
224 |
Q |
|
|
||||||||||| |||||||||||| | |||||||| |||||||||||| |||||||| ||||| |
|
|
T |
22788063 |
gaattctgctctttacccaaatggatttgttcattcccaaagtaaatgaccaaaataccccta |
22788001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 18387240 - 18387314
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||| ||||||||| || ||||| ||||||||||| || ||||| || || |||||||||| |
|
|
T |
18387240 |
tgaattctgctcattactcaaatggttctgctcattcccaaagtaaatatcaaaaatgcccttacgcatgttaac |
18387314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 8273245 - 8273318
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||| | | ||||| |||||||||||| || |||| ||||| |||||||||| |
|
|
T |
8273245 |
gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaac |
8273318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 19984781 - 19984720
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccct |
223 |
Q |
|
|
||||||||||| ||||||||| ||||||| || |||| |||||||||| |||||||| |||| |
|
|
T |
19984781 |
gaattctgctctttacccaaacggttatgctcgtttctaaagtaaatgaccaaaatacccct |
19984720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 5037298 - 5037350
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtcca |
213 |
Q |
|
|
|||||||||||| ||||| ||| |||| ||||| ||||||||||||||||||| |
|
|
T |
5037298 |
tgaattctgctctttaccaaaacggttttgttcgtttccaaagtaaatgtcca |
5037350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 12967270 - 12967344
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagt-aaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||| |||||||| | ||||| |||||| ||| |||||||||| ||||| |||||||||| |
|
|
T |
12967270 |
gaattctgctcattacctaaatggttccgctcattctcaaagtaaaaagtccaaaatacccctacgcatgttaac |
12967344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 20685006 - 20685062
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
|||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||| |
|
|
T |
20685006 |
gaattctgctcattacccaaatggttccgctcattctcaaagtaaaagtctaaaata |
20685062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 35060974 - 35060900
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| |||||||||| |
|
|
T |
35060974 |
tgaattctgctcattacccaaatgattccgctcatttccaaagtaaatgtccaaaatgcccctacgcatgttaac |
35060900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 14153354 - 14153427
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||||||||| || || ||||| |||||||||||| |||||||| ||||| |||||||||| |
|
|
T |
14153354 |
gaattctgctcattacccaaatgattttgctcattcccaaagtaaatgaccaaaatacccctacgcatgttaac |
14153427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 807183 - 807122
Alignment:
Q |
258 |
gctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcacacaaaagaaaaa |
319 |
Q |
|
|
||||||||||||||| |||||||||| |||| |||| ||||||||||||| ||||| ||||| |
|
|
T |
807183 |
gctagtgttaaatttgcgtgagttaactcacactgcgtgacttaagtcacgcaaaaaaaaaa |
807122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 31522614 - 31522538
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaactt |
237 |
Q |
|
|
||||||||||||||||||||||||||| | ||||| |||||||||||| || |||| ||||| ||| |||||||| |
|
|
T |
31522614 |
tgaattctgctcattacccaaatggttccgctcattcccaaagtaaatgaccgaaatgcccctacgcaagttaactt |
31522538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 23608427 - 23608501
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
||||||||||||||| |||||| || ||||||| ||||| |||| ||| |||||||||||| ||||||||||| |
|
|
T |
23608427 |
gaattctgctcattattcaaatgattccgttcattcccaaaataaaagtctaaaatatccctacgcatgttaact |
23608501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 14430944 - 14431024
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgca |
242 |
Q |
|
|
|||||||||| ||||| ||| |||| || ||||||| ||||||||||| ||||| |||||| ||||||||||| ||||| |
|
|
T |
14430944 |
gaattctgctatttacctaaacggttctgctcatttctaaagtaaatgtttaaaatgtccctacgcatgttaactcacgca |
14431024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 14431552 - 14431471
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgcaa |
243 |
Q |
|
|
||||||| ||| |||| |||| |||| |||||||| | ||||||||||| ||||| ||||||| ||||||||| |||||| |
|
|
T |
14431552 |
gaattctactctttacacaaacggttttgttcattcctaaagtaaatgttcaaaacatccctacatatgttaactcacgcaa |
14431471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 17436619 - 17436546
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||| | | || || |||||||||||| || |||| |||||| ||||||||| |
|
|
T |
17436619 |
gaattctgctcattacccaaatggattcgctcgttcccaaagtaaatgaccgaaatgtccctacacatgttaac |
17436546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 806687 - 806739
Alignment:
Q |
309 |
caaaagaaaaacacactaaaacccagcgtga-ttaacttacgctggttttgtt |
360 |
Q |
|
|
||||| ||||||||||| ||||||| ||||| |||||| |||||||||||||| |
|
|
T |
806687 |
caaaaaaaaaacacactgaaacccaacgtgagttaactcacgctggttttgtt |
806739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 37687392 - 37687331
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatcc |
221 |
Q |
|
|
|||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
T |
37687392 |
atgaattctgcttattacccaaatggttccgctcatttccaaagtaaatgtccaaaatatcc |
37687331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 43641053 - 43640976
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaactt |
237 |
Q |
|
|
|||||||||||||||||||||||||||| | |||||||||||||||||| |||| | ||||| |||||||||||| |
|
|
T |
43641053 |
atgaattctgctcattacccaaatggtttggctcatttccaaagtaaatgatcaaattgcccctacgcatgttaactt |
43640976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 23559061 - 23558983
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||||||||||| |||||||||| | ||||| |||| ||||| ||||||||| ||||| ||||||||||||||| |
|
|
T |
23559061 |
gaattctgctcattatccaaatggttccgctcattgccaaggtaaaagtccaaaatgcccctacgcatgttaacttacg |
23558983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 35841397 - 35841469
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaa |
234 |
Q |
|
|
||||||||||| ||||| ||| ||| || |||||| ||||||||||||||||||||||||| ||||||||| |
|
|
T |
35841397 |
gaattctgctctttaccaaaacagttgtgctcatttttaaagtaaatgtccaaaatatccctacgcatgttaa |
35841469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 33220867 - 33220792
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||||||| ||||| |||||||||| || |||||| ||||| |||||||||| |
|
|
T |
33220867 |
atgaattctgctcattacccaaatggtttcactcattcccaaagtaaaagttcaaaatgcccctacgcatgttaac |
33220792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 9418585 - 9418632
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaa |
207 |
Q |
|
|
|||||||||||||||||||||||||||| | ||||| |||||||||| |
|
|
T |
9418585 |
atgaattctgctcattacccaaatggtttcgctcattcccaaagtaaa |
9418632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 33220021 - 33220079
Alignment:
Q |
159 |
tatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
|||||||||||||||||| |||||||||| | ||| ||||||||||||||| ||||||| |
|
|
T |
33220021 |
tatgaattctgctcattatccaaatggttccgctca-ttccaaagtaaatgttcaaaata |
33220079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 31762240 - 31762314
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||| ||||||| | | ||||| ||||||||||| | |||||||||||||||||||||| |
|
|
T |
31762240 |
tgaattctgctcattattcaaatggattcgctcattcccaaagtaaataaacgaaatatccctatgcatgttaac |
31762314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 5967315 - 5967242
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||||| | | ||||| |||||||||||| | |||| ||||| |||||||||| |
|
|
T |
5967315 |
gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgatcgaaatgcccctacgcatgttaac |
5967242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 9384617 - 9384678
Alignment:
Q |
163 |
aattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatcccta |
224 |
Q |
|
|
|||||||||||||| ||||||||| | |||||| |||| |||||||||||||| |||||| |
|
|
T |
9384617 |
aattctgctcattattcaaatggttccgctcattttcaaaataaatgtccaaaatgtcccta |
9384678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 27992382 - 27992303
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||| || ||||||||||||||| | || ||||||| ||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
T |
27992382 |
gaattatgttcattacccaaatggatttgctcatttctaaaataaatgtccaaaatacccctatgcatgttaactcacgc |
27992303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 33164584 - 33164510
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||||| |||||||||| |
|
|
T |
33164584 |
tgaattctgctcattacccaaatggttccgctcattctcaaagtaaatgtccaaaatgcccctacgcatgttaac |
33164510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 38677740 - 38677662
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||||||| ||||||||| | || |||||||| ||||||||||| | |||||||||||| ||||||||||||||| |
|
|
T |
38677740 |
gaattctgctctttacccaaacgattttgttcattcccaaagtaaatattcaaaatatccctgcgcatgttaacttacg |
38677662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 36217870 - 36217948
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||||||| |||| ||||||||| | ||||| |||||||||| ||||||||| ||||| ||||||||||||||| |
|
|
T |
36217870 |
gaattctgctctttactcaaatggttttactcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacttacg |
36217948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 36172165 - 36172238
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||||||||||||| ||| ||||| |||||||||| |||||||||| ||||||| |||||||| |
|
|
T |
36172165 |
gaattctgctcattacccaaatagttccactcattcccaaagtaaaagtccaaaatacccctatgtatgttaac |
36172238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 37576543 - 37576594
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtcca |
213 |
Q |
|
|
||||||||||||||||||||| |||| || || ||||||||||||||||||| |
|
|
T |
37576543 |
gaattctgctcattacccaaacggttttgctcgtttccaaagtaaatgtcca |
37576594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 38676939 - 38677017
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||||| ||| ||| ||||| |||| || ||||| ||||| ||||||||||||||| | ||| ||||||||||||||| |
|
|
T |
38676939 |
gaattctcctctttatccaaacggttttgctcattcccaaaataaatgtccaaaatacctctacgcatgttaacttacg |
38677017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 24974221 - 24974151
Alignment:
Q |
165 |
ttctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
|||||||||||| |||||||| | || ||||| |||||||||||| || |||| ||||| |||||||||| |
|
|
T |
24974221 |
ttctgctcattatccaaatggatttgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaac |
24974151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 40312874 - 40312816
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
|||| |||||||||||||||||||| || | |||||||||||||||| ||| |||||| |
|
|
T |
40312874 |
atgatttctgctcattacccaaatgatttcgctcatttccaaagtaaaagtctaaaata |
40312816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 40322950 - 40322892
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaata |
218 |
Q |
|
|
|||| |||||||||||||||||||| || | |||||||||||||||| ||| |||||| |
|
|
T |
40322950 |
atgatttctgctcattacccaaatgatttcgctcatttccaaagtaaaagtctaaaata |
40322892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 54208180 - 54208258
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||| ||||| ||| |||||||||| || ||||| |||||||||||| ||||||| ||||| || ||||||||||| |
|
|
T |
54208180 |
gaattatgctctttatccaaatggttttgctcattcccaaagtaaatgatcaaaatacccctactcaagttaacttacg |
54208258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 54209127 - 54209066
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccct |
223 |
Q |
|
|
||||||||||| ||| | ||| ||||||||||||| ||||||||||||| || | ||||||| |
|
|
T |
54209127 |
gaattctgctctttatctaaacggttatgttcattcccaaagtaaatgttcatattatccct |
54209066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 628085 - 628113
Alignment:
Q |
159 |
tatgaattctgctcattacccaaatggtt |
187 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
628085 |
tatgaattctgctcattacccaaatggtt |
628113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 26009369 - 26009443
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaact |
236 |
Q |
|
|
||||||||||| ||||||||| | || || ||||| |||||||||||| ||||||||| |||| ||||||||||| |
|
|
T |
26009369 |
gaattctgctctttacccaaacgattttgctcattcccaaagtaaatgaccaaaatattcctacgcatgttaact |
26009443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 38790884 - 38790958
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcattt-ccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||| |||||||||| | |||||| |||||||||| |||||||||| ||||| |||||||||| |
|
|
T |
38790884 |
gaattctgctcattatccaaatggtttcgctcattttccaaagtaaaagtccaaaatacccctacgcatgttaac |
38790958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 149051 - 149100
Alignment:
Q |
258 |
gctagtgttaaattttcgtgagttaattcacgctgcatgacttaagtcac |
307 |
Q |
|
|
||||||||||||||| |||||||||| ||||| ||||||||||||||||| |
|
|
T |
149051 |
gctagtgttaaatttgcgtgagttaagtcacgttgcatgacttaagtcac |
149100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 26012037 - 26011953
Alignment:
Q |
156 |
cactatgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||| ||||||||||| ||||||||| | || | ||||| ||||||||||| |||||||| | ||||||||||||||||||| |
|
|
T |
26012037 |
cactaagaattctgctctttacccaaacgattttaatcattctcaaagtaaatgaccaaaatacctctatgcatgttaacttacg |
26011953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 42548161 - 42548216
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaat |
217 |
Q |
|
|
|||||||||||||||||||||| ||| || ||||| |||||||||| ||||||||| |
|
|
T |
42548161 |
gaattctgctcattacccaaatcgttttgctcattcccaaagtaaaagtccaaaat |
42548216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 28138759 - 28138820
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccct |
223 |
Q |
|
|
||||||||||| ||||||||||| || || ||||| |||||||||||| |||||||| |||| |
|
|
T |
28138759 |
gaattctgctctttacccaaatgattttgctcattcccaaagtaaatgaccaaaatacccct |
28138820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 5247 - 5177
Alignment:
Q |
165 |
ttctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||||||| | | ||||| |||||||||||| || |||| ||||| |||||||||| |
|
|
T |
5247 |
ttctgctcattacccaaatggattcgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaac |
5177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 30359733 - 30359781
Alignment:
Q |
192 |
tcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||| |||||||||| |||||||| ||||||||| |||||||||||| |
|
|
T |
30359733 |
tcattcccaaagtaaaagtccaaaacgtccctatgcttgttaacttacg |
30359781 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 41957646 - 41957586
Alignment:
Q |
160 |
atgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatc |
220 |
Q |
|
|
||||||| ||||| ||||||||| | || || ||||| |||||||||||| |||||||||| |
|
|
T |
41957646 |
atgaattttgctctttacccaaacgattttgatcattcccaaagtaaatgaccaaaatatc |
41957586 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1063
Description:
Target: scaffold1063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 1474 - 1548
Alignment:
Q |
161 |
tgaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaac |
235 |
Q |
|
|
||||||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||| |||||||||| |
|
|
T |
1474 |
tgaattctgctcattacccaaatggttccgctcatttttaaagtaaaagtccaaaatgcccctgcgcatgttaac |
1548 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 8384 - 8463
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacgc |
241 |
Q |
|
|
||||||||||| ||||||||| | || || ||||||| ||||||||||| |||||| || || ||||||||||| |||| |
|
|
T |
8384 |
gaattctgctctttacccaaacgtttctgctcatttctaaagtaaatgtgtaaaatacccttacgcatgttaactcacgc |
8463 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1763 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1763
Description:
Target: scaffold1763; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 442 - 364
Alignment:
Q |
162 |
gaattctgctcattacccaaatggttatgttcatttccaaagtaaatgtccaaaatatccctatgcatgttaacttacg |
240 |
Q |
|
|
||||| ||||| |||||||||||||| | ||||| |||||||||| ||| |||| || |||||||||||||||||| |
|
|
T |
442 |
gaattatgctctttacccaaatggtttcgctcattcccaaagtaaaaatcccaaatgcccttatgcatgttaacttacg |
364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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