View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0917_high_30 (Length: 257)
Name: NF0917_high_30
Description: NF0917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0917_high_30 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 30 - 257
Target Start/End: Original strand, 36187969 - 36188196
Alignment:
| Q |
30 |
ttaagctctctactttgttagtcacctacacatgtgacatatgtcaaaacaaaatcggtgatcaaactgttggaataaacagtaccaacaaagcacctcg |
129 |
Q |
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| T |
36187969 |
ttaagctctctactttgttagtcacctacacatgtgacatatgtcaaaacaaaatcggtgatcaaactgttggaataaacagtaccaacaaagcacctcg |
36188068 |
T |
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| Q |
130 |
ttgaacccaacattttctaactacgtattatgtctccaaatcaaaattgtgaagcttgacgatttgatatttcaagaaggcatcaagcaaagtaacaata |
229 |
Q |
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| T |
36188069 |
ttgaatctaacattttctaactacgtattatgtctccaaatcaaaattgtgaagcttgacgatttgatatttcaagaaggcatcaagcaaagtaacaata |
36188168 |
T |
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| Q |
230 |
gtaaaaaggatggaaatgggttcggtgc |
257 |
Q |
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| T |
36188169 |
gtaaaaaggatggaaatgggttcggtgc |
36188196 |
T |
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