View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0917_high_38 (Length: 251)

Name: NF0917_high_38
Description: NF0917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0917_high_38
NF0917_high_38
[»] chr4 (6 HSPs)
chr4 (1-229)||(55397340-55397577)
chr4 (84-129)||(56396758-56396803)
chr4 (79-155)||(55264429-55264505)
chr4 (117-175)||(33614335-33614393)
chr4 (76-154)||(38046271-38046348)
chr4 (111-155)||(39051161-39051205)
[»] chr7 (7 HSPs)
chr7 (88-163)||(32296336-32296411)
chr7 (33-157)||(33384055-33384181)
chr7 (79-131)||(41008917-41008969)
chr7 (111-175)||(10524994-10525058)
chr7 (51-131)||(3411716-3411798)
chr7 (78-131)||(43498269-43498322)
chr7 (78-154)||(42709948-42710024)
[»] chr3 (10 HSPs)
chr3 (80-154)||(29504872-29504946)
chr3 (80-175)||(33429070-33429165)
chr3 (78-155)||(16298223-16298300)
chr3 (81-157)||(31578668-31578744)
chr3 (79-155)||(55446978-55447054)
chr3 (81-155)||(1163419-1163493)
chr3 (109-175)||(47337256-47337322)
chr3 (57-124)||(49547596-49547665)
chr3 (82-131)||(40472956-40473005)
chr3 (80-136)||(33428919-33428975)
[»] chr1 (10 HSPs)
chr1 (79-155)||(7790312-7790388)
chr1 (80-175)||(8793000-8793095)
chr1 (63-157)||(1818352-1818448)
chr1 (87-163)||(845082-845158)
chr1 (111-157)||(34835652-34835698)
chr1 (111-157)||(40649841-40649887)
chr1 (52-131)||(27293283-27293364)
chr1 (34-124)||(50147086-50147178)
chr1 (79-155)||(15395225-15395301)
chr1 (117-157)||(38576673-38576713)
[»] chr5 (8 HSPs)
chr5 (80-131)||(9900231-9900282)
chr5 (79-155)||(1189371-1189447)
chr5 (79-131)||(8285058-8285110)
chr5 (51-124)||(11275790-11275865)
chr5 (51-163)||(11243257-11243369)
chr5 (84-157)||(11275695-11275768)
chr5 (79-131)||(8285233-8285285)
chr5 (79-163)||(39643050-39643134)
[»] chr8 (9 HSPs)
chr8 (79-175)||(41424440-41424536)
chr8 (80-131)||(12220825-12220876)
chr8 (111-175)||(33229553-33229617)
chr8 (84-131)||(29490409-29490456)
chr8 (79-157)||(32029608-32029686)
chr8 (79-128)||(29490604-29490653)
chr8 (79-163)||(5840927-5841011)
chr8 (79-163)||(5847087-5847171)
chr8 (63-157)||(32029419-32029514)
[»] chr2 (6 HSPs)
chr2 (80-175)||(17658809-17658904)
chr2 (85-163)||(22191420-22191498)
chr2 (80-175)||(32502997-32503092)
chr2 (79-128)||(8257559-8257608)
chr2 (80-109)||(33939858-33939887)
chr2 (111-163)||(8033614-8033666)
[»] scaffold0252 (1 HSPs)
scaffold0252 (84-154)||(19795-19865)
[»] scaffold0154 (1 HSPs)
scaffold0154 (79-131)||(6215-6267)
[»] chr6 (6 HSPs)
chr6 (111-175)||(21394424-21394487)
chr6 (79-157)||(24794069-24794147)
chr6 (80-157)||(19121887-19121964)
chr6 (84-157)||(23765881-23765954)
chr6 (79-163)||(8592206-8592289)
chr6 (79-131)||(21969269-21969321)
[»] scaffold0340 (1 HSPs)
scaffold0340 (84-131)||(10910-10957)
[»] scaffold0022 (1 HSPs)
scaffold0022 (78-131)||(62720-62773)


Alignment Details
Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 55397340 - 55397577
Alignment:
Q  1 cgtttttagagatttattttcccactctttctccactaaacca--------gtccttctctttataaatcattctcaaattaat--tcgactctattaat 90  Q
    ||||||||||||||||||||||||||||||||| |||||||||        ||| |||||||| ||||||||||||||||||||  |||||| |||||||    
T  55397340 cgtttttagagatttattttcccactctttctcgactaaaccatcaatttggtcattctctttctaaatcattctcaaattaatcttcgactttattaat 55397439  T
Q  91 attttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaatgtnnnnnnnntttga 190  Q
    ||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||        |||||    
T  55397440 attttaaaatagtttttatctttgttaaaagttttttaatttaatccctcatcatgtgacaaaaacaaagagaaatggatctaatgt-aagaacttttga 55397538  T
Q  191 caatattattttaaaatagtccatgtctttgtcaaaaaa 229  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  55397539 caatattattttaaaatagttcatgtctttgtaaaaaaa 55397577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 56396758 - 56396803
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaa 129  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  56396758 tattaatattttaaactaatccttatatttgttaaaagtttctcaa 56396803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 55264429 - 55264505
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    |||||||||||||||| |||||| |  || | ||||| |||||||| |||||| |||| || |||||||||||||||    
T  55264429 gactctattaatatttcaaaatagtcattgtctttgtcaaaagtttttcaattaaatctcttatcatgtgacaaaaa 55264505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 33614393 - 33614335
Alignment:
Q  117 aaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||||||||||||  ||||||||||||||| ||||||| | |||||| || |||||    
T  33614393 aaaagtttctcaatttggtccctcatcatgtgataaaaacataaagaaagagacctaat 33614335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 38046348 - 38046271
Alignment:
Q  76 ttcgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaa 154  Q
    ||||||| ||||||||||||||  |||||||| | |||||||||||||| | ||||  ||| ||| |||||||||||||    
T  38046348 ttcgactttattaatattttaagttaatttttgtctttgttaaaagttt-ttaattagatctctcttcatgtgacaaaa 38046271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 39051161 - 39051205
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    ||||||||||||||||||||| | || ||| ||||||||||||||    
T  39051161 tttgttaaaagtttctcaattaagtcactcgtcatgtgacaaaaa 39051205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 32296336 - 32296411
Alignment:
Q  88 aatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||| ||||||||||||| |||||    
T  32296336 aatattttaaaataatttgtatatttgttaaaagtttctcaattaaatcattcatcgtgtgacaaaaacatagaga 32296411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 33384055 - 33384181
Alignment:
Q  33 ccactaaaccagtccttctctttataaatcattctcaaattaat--tcgactctattaatattttaaaataatttttatatttgttaaaagtttctcaat 130  Q
    |||||||| |||||  ||||||| ||| ||||  ||||||||||  || |||||||||||||||||||||| | | | | || |||||||||||||||||    
T  33384055 ccactaaatcagtctctctctttttaagtcatcttcaaattaatcttcaactctattaatattttaaaatagtctatgtcttcgttaaaagtttctcaat 33384154  T
Q  131 ttaatccctcatcatgtgacaaaaaca 157  Q
    | | ||  ||||||||||| |||||||    
T  33384155 taagtcattcatcatgtgataaaaaca 33384181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 41008969 - 41008917
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||||||||||||||||||||| | | ||| |||||||||||||||||||||    
T  41008969 gactctattaatattttaaaatagtctctatctttgttaaaagtttctcaatt 41008917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 10525058 - 10524994
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||| |||||||||||||||   |||||| |||||||||||||||| | ||| |||||||||||    
T  10525058 tttgtcaaaagtttctcaattaggtccctcgtcatgtgacaaaaacataaagatagggatctaat 10524994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 3411798 - 3411716
Alignment:
Q  51 tctttataaatcattctcaaattaat--tcgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||||||||| ||| ||||||||||  ||||||||||| |||||||||| | || ||||| || || |||||||| ||||||    
T  3411798 tctttataaattattttcaaattaatcttcgactctattgatattttaaattgatctttattttggtcaaaagtttttcaatt 3411716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 43498322 - 43498269
Alignment:
Q  78 cgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||||| ||||||||||||| ||||| || | |||||||||| ||||||||||    
T  43498322 cgactcttttaatattttaaattaattattgtctttgttaaaaatttctcaatt 43498269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 42709948 - 42710024
Alignment:
Q  78 cgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaa 154  Q
    |||||||||||||||||||||||| |   | | ||||| ||||||||||||||| | |||||| |||| ||| ||||    
T  42709948 cgactctattaatattttaaaatagtcaatgtctttgtcaaaagtttctcaattaagtccctcgtcatatgaaaaaa 42710024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 29504946 - 29504872
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaa 154  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||| ||||  |||||| |||||||||||||    
T  29504946 actctattaatattttaaactagtttttatctttgttaaaagtttctcgatttggtccctcgtcatgtgacaaaa 29504872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 33429165 - 33429070
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||||||||||||||||||||   ||| ||| | |||||||| |||||| | ||  || |||||||||||||||||||||||| | |||||||    
T  33429165 actctattaatattttaaaataatcaatatctttatcaaaagtttttcaattaagtctttcgtcatgtgacaaaaacaaagagaaatgaatctaat 33429070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 16298223 - 16298300
Alignment:
Q  78 cgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    ||||| |||||||||||||||||||| | | | ||||| ||| | ||||||||| ||||||||||||| |||||||||    
T  16298223 cgactttattaatattttaaaataatctctgtgtttgtcaaatgattctcaattaaatccctcatcatatgacaaaaa 16298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 31578744 - 31578668
Alignment:
Q  81 ctctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||||||||||||||||| || | ||||| |||||||||| |||||||||| | || |||||  |||||||||||||    
T  31578744 ctctattaatattttaaactagtctttatctttgttaaaaatttctcaattaactctctcattgtgtgacaaaaaca 31578668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 55446978 - 55447054
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    |||||||||||||||| |||||| |   | | |||||||||| |||||||||| ||||||||||||||||| |||||    
T  55446978 gactctattaatatttcaaaatagtccatgtctttgttaaaattttctcaattaaatccctcatcatgtgaaaaaaa 55447054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 1163419 - 1163493
Alignment:
Q  81 ctctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    ||||||||||||||||||||| ||| | | ||||| ||||||||||||||| | || ||| |||||||| |||||    
T  1163419 ctctattaatattttaaaatagtttatgtgtttgtcaaaagtttctcaattaagtctctcgtcatgtgaaaaaaa 1163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 47337322 - 47337256
Alignment:
Q  109 tatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||| ||||||||||||||| | |||||| | || ||||||||||| ||||| |||||||||||    
T  47337322 tatttgtcaaaagtttctcaattaagtccctcgttatatgacaaaaacatagagacagggatctaat 47337256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 49547596 - 49547665
Alignment:
Q  57 taaatcattctcaaattaat--tcgactctattaatattttaaaataatttttatatttgttaaaagttt 124  Q
    ||||||||||||||||||||  | ||||||||||||||||||||| || || | | ||||||||||||||    
T  49547596 taaatcattctcaaattaatcattgactctattaatattttaaaaaaaattatgtctttgttaaaagttt 49547665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 40473005 - 40472956
Alignment:
Q  82 tctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||||||||||||||| || | ||||| ||||| |||||||||||||||    
T  40473005 tctattaatattttaaattagtatttatttttgtcaaaagtttctcaatt 40472956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 33428919 - 33428975
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatc 136  Q
    ||||||||||||||| |||||| ||  ||| ||||| ||||||||||||||| ||||    
T  33428919 actctattaatatttcaaaatagttcatatctttgtcaaaagtttctcaattaaatc 33428975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 7790312 - 7790388
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    |||| ||||||||||||||| |||||||| | ||||| |||||||| | |||||| |||||||||||||||||||||    
T  7790312 gactttattaatattttaaattaatttttgtctttgtcaaaagttttttaatttagtccctcatcatgtgacaaaaa 7790388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 8793000 - 8793095
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||||||||||| |||||||| ||||  |||||||||   ||||||||| | ||| || |||||||||||||||||||| |||||||| ||||    
T  8793000 actctattaatatttcaaaataatctttacttttgttaaagaattctcaattaagtccttcgtcatgtgacaaaaacaaagaaaaagggatataat 8793095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 1818448 - 1818352
Alignment:
Q  63 attctcaaattaat-tc-gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||||||||||||| || ||||||||||||||||||||||| ||| | | ||| ||||| ||||||| ||| | ||||||||||||||| |||||||    
T  1818448 attctcaaattaatatctgactctattaatattttaaaatagtttctgtttttattaaatgtttctcgattaagtccctcatcatgtgaaaaaaaca 1818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 845158 - 845082
Alignment:
Q  87 taatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    |||||||| |||||||| ||| | ||||| | ||||||||||||| | |  |||||||||||||||||||| |||||    
T  845158 taatatttcaaaataatatttgtctttgtcagaagtttctcaattaagtgtctcatcatgtgacaaaaacatagaga 845082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 34835652 - 34835698
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    ||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  34835652 tttgtcaaaagtttctcaatttagtcctttatcatgtgacaaaaaca 34835698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 40649841 - 40649887
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    ||||||||||||||||||||| | |||||| |||||||| |||||||    
T  40649841 tttgttaaaagtttctcaattaagtccctcgtcatgtgaaaaaaaca 40649887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 27293283 - 27293364
Alignment:
Q  52 ctttataaatcattctcaaattaat-tc-gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||| |||||||||||||||||| | || |||||||||||||||| ||| || || |||| ||||  |||||||||||||||    
T  27293283 ctttgtaaatcattctcaaattagtctctgactctattaatatttcaaattagttcttatctttgccaaaagtttctcaatt 27293364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 50147086 - 50147178
Alignment:
Q  34 cactaaaccagtccttctctttataaatcattctcaaattaattc--gactctattaatattttaaaataatttttatatttgttaaaagttt 124  Q
    |||||||  ||||||| | ||| ||| | ||||| ||||||||||  || ||||||||||||||||| ||||  |||| ||||||||||||||    
T  50147086 cactaaattagtccttatttttgtaagttattcttaaattaattcttgaatctattaatattttaaattaatcattatctttgttaaaagttt 50147178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 15395225 - 15395301
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    ||||||||||||||||||||||| | | | | ||||||||||  ||||||||| | |||||| | |||||| |||||    
T  15395225 gactctattaatattttaaaatagtctctgtctttgttaaaaaattctcaattaagtccctcgttatgtgaaaaaaa 15395301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 38576713 - 38576673
Alignment:
Q  117 aaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||| |||||||||| ||||||||||||||| |||||||||    
T  38576713 aaaaatttctcaattaaatccctcatcatgtaacaaaaaca 38576673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 9900231 - 9900282
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9900231 actctattaatattttaaaataatttttatctttgtcaaaagtttctcaatt 9900282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 1189371 - 1189447
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaa 155  Q
    |||||||||||||||| ||| |||||| ||| ||||| |||||||| |||||| |||| |||||||||||| |||||    
T  1189371 gactctattaatatttcaaactaatttatatctttgtcaaaagtttttcaattaaatcactcatcatgtgaaaaaaa 1189447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 8285058 - 8285110
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||||||||||||||||| || | | ||||| |||||||||||||||    
T  8285058 gactctattaatattttaaaataagttctgtctttgtcaaaagtttctcaatt 8285110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 11275865 - 11275790
Alignment:
Q  51 tctttataaatcattctcaaattaat-tc-gactctattaatattttaaaataatttttatatttgttaaaagttt 124  Q
    ||||| |||||||||||||||||| | || |||| ||||||||||||||| || ||| ||||||||| ||||||||    
T  11275865 tctttgtaaatcattctcaaattagtctctgactttattaatattttaaattagtttctatatttgtcaaaagttt 11275790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 11243257 - 11243369
Alignment:
Q  51 tctttataaatcattctcaaattaattcgactctattaatattttaaaataatttttatatttgttaaaagtttctcaattta-atccctcatcatgtga 149  Q
    ||||||||||||| | |||||||| | ||| | |||||||||||||||||| |  || | ||||  ||||||||||||||| |  |||||| |||||| |    
T  11243257 tctttataaatcactttcaaattagt-cgattatattaatattttaaaatagtccttgtctttgcaaaaagtttctcaattaagctccctcgtcatgtaa 11243355  T
Q  150 caaaaacaaagaga 163  Q
    |||||||| |||||    
T  11243356 caaaaacatagaga 11243369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 11275695 - 11275768
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||||||||||| || || | ||| | ||||| |||||||||||||||| ||||||  || |||||||||||||    
T  11275695 tattaatattttcaactagtctttgtctttgtcaaaagtttctcaatttgatccctagtcgtgtgacaaaaaca 11275768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 8285285 - 8285233
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||| |||||||||||||||||| | | ||| ||||| |||||||||||||||    
T  8285285 gactatattaatattttaaaatagtctatatctttgtcaaaagtttctcaatt 8285233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 39643050 - 39643134
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    ||||||||||||||||||||||  || || | ||| | |||||||| |||||| | ||  || |||||||||||||||| |||||    
T  39643050 gactctattaatattttaaaatgcttcttgtctttatcaaaagtttatcaattaagtctttcgtcatgtgacaaaaacatagaga 39643134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 41424440 - 41424536
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    |||||||||||||||||||| || ||||||| ||||| |||| ||| |||||| | ||  || || ||||||||||||||| ||||| |||||||||    
T  41424440 gactctattaatattttaaattagtttttatttttgtcaaaaatttttcaattaagtctatcgtcttgtgacaaaaacaaatagaaaaggatctaat 41424536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 12220876 - 12220825
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||| |||||||||||||||||| ||| | |||||||||||||||||||||    
T  12220876 actcttttaatattttaaaataatctttgtctttgttaaaagtttctcaatt 12220825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 33229553 - 33229617
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||| |||||||||||||||   |||||| |||||||||||||||| | ||| |||||||||||    
T  33229553 tttgtcaaaagtttctcaattaggtccctcgtcatgtgacaaaaacataaagacagggatctaat 33229617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 29490409 - 29490456
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||||||||||| ||||| | ||||| |||||||||||||||    
T  29490409 tattaatattttaaaatagtttttgtctttgtaaaaagtttctcaatt 29490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 32029686 - 32029608
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    ||||||||| ||||||||||||| ||  | | ||||| |||| |||||||||||| |||||  |||||||| |||||||    
T  32029686 gactctatttatattttaaaatagttcatgtctttgtcaaaaatttctcaatttagtcccttgtcatgtgaaaaaaaca 32029608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 29490653 - 29490604
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctca 128  Q
    |||| |||||||||||||||||||| ||||| || || ||||||||||||    
T  29490653 gactttattaatattttaaaataatctttatcttcgtcaaaagtttctca 29490604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 5841011 - 5840927
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    |||||||||||||||||||  || ||| ||| ||| | |||||| ||| |||| | | | ||||||||||||||||| |||||||    
T  5841011 gactctattaatattttaatttagtttctatctttatcaaaagtgtctgaattaagttcttcatcatgtgacaaaaataaagaga 5840927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 5847171 - 5847087
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    |||||||||||||||||||  || ||| ||| ||| | |||||| ||| |||| | | | ||||||||||||||||| |||||||    
T  5847171 gactctattaatattttaatttagtttctatctttatcaaaagtgtctgaattaagttcttcatcatgtgacaaaaataaagaga 5847087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 32029419 - 32029514
Alignment:
Q  63 attctcaaattaat-tc-gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||||||||||||| || |||||| ||||||||| |||||| | || || |||||||||||||| |||||| | |||||| |||||| | |||||||    
T  32029419 attctcaaattaatctctgactctgttaatatttcaaaatagtctt-atctttgttaaaagtttttcaattaagtccctcgtcatgtaaaaaaaaca 32029514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 17658809 - 17658904
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||||||||||| |||||| |  || | ||||| |||| |||||||||| | || ||| ||||||||||||||||||||||||  ||||||||    
T  17658809 actctattaatatttcaaaatagtcattgtctttgtcaaaaatttctcaattaagtctctcgtcatgtgacaaaaacaaagagaaaatgatctaat 17658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 22191420 - 22191498
Alignment:
Q  85 attaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    ||||||||||||||||| | ||| | ||||| ||||||||||| ||| | |||||| |||||||||||||| |||||||    
T  22191420 attaatattttaaaatagtctttgtctttgtcaaaagtttctctattaagtccctcgtcatgtgacaaaaataaagaga 22191498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 32503092 - 32502997
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    |||||||| ||||||||||||| |  || | ||||| ||||| ||||||||| | |||||| |||| ||| ||||||| ||||| || ||||||||    
T  32503092 actctattgatattttaaaatagtcattgtctttgtcaaaagattctcaattaagtccctcgtcatatgataaaaacatagagacagagatctaat 32502997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 8257608 - 8257559
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctca 128  Q
    |||||||||| ||||||||| |||| ||| | ||||||||||||||||||    
T  8257608 gactctattattattttaaattaatctttttctttgttaaaagtttctca 8257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 109
Target Start/End: Original strand, 33939858 - 33939887
Alignment:
Q  80 actctattaatattttaaaataatttttat 109  Q
    ||||||||||||||||||||||||||||||    
T  33939858 actctattaatattttaaaataatttttat 33939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 8033614 - 8033666
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    ||||||||||||||||||||| | || ||| |||| ||||||||||| |||||    
T  8033614 tttgttaaaagtttctcaattaagtctctcgtcatatgacaaaaacatagaga 8033666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 19795 - 19865
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaa 154  Q
    ||||||||||||||| || | ||| | ||||| ||||||||||||||||  |||||||| |||||||||||    
T  19795 tattaatattttaaactagtctttgtgtttgtcaaaagtttctcaatttggtccctcattatgtgacaaaa 19865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 6267 - 6215
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||||||||| |||||| |||||   |||||||||||||||||||||    
T  6267 gactctattaatatttcaaaatagtttttgcctttgttaaaagtttctcaatt 6215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 21394424 - 21394487
Alignment:
Q  111 tttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagagaaagggatctaat 175  Q
    ||||||||||||||||||||| | | |||| |||||||| ||||||| |||| ||||||||||||    
T  21394424 tttgttaaaagtttctcaattaagtacctcgtcatgtgataaaaacatagag-aagggatctaat 21394487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 24794069 - 24794147
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    |||| ||||||||||| ||| |||||| | | |||||||||||||| | |||||  |||||||  ||||||||||||||    
T  24794069 gactttattaatatttcaaactaatttatgtttttgttaaaagttttttaatttggtccctcaatatgtgacaaaaaca 24794147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 19121887 - 19121964
Alignment:
Q  80 actctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    ||||||||||||||||||| || ||| ||| ||||| ||||| |||| ||||   |||||||||||  ||||||||||    
T  19121887 actctattaatattttaaactagtttctatctttgtcaaaagcttctaaattaggtccctcatcatcggacaaaaaca 19121964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 23765954 - 23765881
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaaca 157  Q
    ||||||||||||||| |||| | ||  | ||| |||| |||||||||| | ||||| |||||||||||||||||    
T  23765954 tattaatattttaaactaatctctaactctgtcaaaaatttctcaattaagtcccttatcatgtgacaaaaaca 23765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 8592289 - 8592206
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatttaatccctcatcatgtgacaaaaacaaagaga 163  Q
    ||||| ||||| ||||||||||||| || || ||||| |||||||| |||||| | ||| || |||| ||||||||||| |||||    
T  8592289 gactcaattaacattttaaaataatctt-atctttgtcaaaagtttttcaattaagtccatcgtcatatgacaaaaacatagaga 8592206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 21969321 - 21969269
Alignment:
Q  79 gactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    ||||| |||||||||||||||||  |||||| ||||| |||||| ||||||||    
T  21969321 gactcaattaatattttaaaatagcttttatttttgtcaaaagtctctcaatt 21969269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 10910 - 10957
Alignment:
Q  84 tattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||||||||||| ||| ||| ||||| |||||||||||||||    
T  10910 tattaatattttaaaatagtttatatctttgtcaaaagtttctcaatt 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 62720 - 62773
Alignment:
Q  78 cgactctattaatattttaaaataatttttatatttgttaaaagtttctcaatt 131  Q
    |||||||||| |||||||||| || || |||| ||||| |||||||||||||||    
T  62720 cgactctattgatattttaaattagttcttatctttgtcaaaagtttctcaatt 62773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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