View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0918_high_42 (Length: 212)
Name: NF0918_high_42
Description: NF0918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0918_high_42 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 29 - 212
Target Start/End: Original strand, 26375037 - 26375221
Alignment:
| Q |
29 |
atcggatacattatagtttatctgcttgttttgatgtgtttagacgt-caacagagcaaatatttttaacatatgaaagtttaatcatcattatatgttc |
127 |
Q |
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| T |
26375037 |
atcggatacattatagtttatctgcttgttttgatgtgcttagacgttcaacagagcaaatatttttaacatatgaaagtttaatcatcattatatgttc |
26375136 |
T |
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| Q |
128 |
atgattacaaaatgtcctttcttcacttgatagttggcaccaatgatttaactttacaacatgaattttgaagcaagataaaaag |
212 |
Q |
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| T |
26375137 |
atgattacaaaatgtcctttcttcacttgatagttggcaccaatgatttaactttacaacatgaattttgaagcaagataaaaag |
26375221 |
T |
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