View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0918_low_30 (Length: 354)
Name: NF0918_low_30
Description: NF0918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0918_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 29 - 297
Target Start/End: Complemental strand, 7254288 - 7254020
Alignment:
| Q |
29 |
atgaagtaatcaattaataagtacttattgtcaataaataaaatttgaagtacctgtttgtaagaagaatctgaggccacaggacaaattggacatttcc |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7254288 |
atgaagtaatcaattaataagtacttattgtcaataaataaaatttgaagtacctgtttgtaagaagaatctgaggccacaggacaaattggacatttcc |
7254189 |
T |
|
| Q |
129 |
aatcttgaacagacagagtagccaatgttactgctaaaattgcatgaattgtagagacaatcctgttggagaaatcaaatgaacgttttggaaagatttt |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7254188 |
aatcttgaacagacagagtagccaatgttactgctaaaattgcatgaattgtagagacaatcctgttggagaaatcaaatgaacgttttggaaagatttt |
7254089 |
T |
|
| Q |
229 |
cctcattacaagaaaagttgttgtccatgaaaaaactccaaccacaattgtcttttgaatatattcttc |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7254088 |
cctcattacaagaaaagttgttgtccatgaaaaaactccaaccacaattgtcttttgaatatattcttc |
7254020 |
T |
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