View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0919_low_13 (Length: 369)

Name: NF0919_low_13
Description: NF0919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0919_low_13
NF0919_low_13
[»] chr2 (9 HSPs)
chr2 (80-332)||(5524306-5524573)
chr2 (254-329)||(19890186-19890261)
chr2 (265-329)||(31452344-31452407)
chr2 (264-329)||(1334881-1334946)
chr2 (282-339)||(9448941-9448998)
chr2 (291-339)||(19514942-19514990)
chr2 (255-337)||(4762384-4762466)
chr2 (282-324)||(15505606-15505648)
chr2 (264-329)||(34904785-34904850)
[»] chr5 (13 HSPs)
chr5 (254-338)||(30501128-30501212)
chr5 (254-338)||(30541471-30541555)
chr5 (254-335)||(16667283-16667364)
chr5 (264-335)||(7719248-7719319)
chr5 (261-339)||(34899123-34899201)
chr5 (254-329)||(18229599-18229674)
chr5 (277-338)||(7968447-7968508)
chr5 (264-329)||(9276577-9276642)
chr5 (265-329)||(30104849-30104913)
chr5 (254-316)||(40530445-40530507)
chr5 (254-329)||(8208213-8208288)
chr5 (254-329)||(8221156-8221231)
chr5 (266-336)||(39558757-39558827)
[»] chr8 (19 HSPs)
chr8 (254-329)||(2258088-2258163)
chr8 (254-321)||(33067536-33067603)
chr8 (254-329)||(35901965-35902040)
chr8 (254-338)||(33013079-33013163)
chr8 (254-329)||(27801223-27801298)
chr8 (254-329)||(42636363-42636438)
chr8 (254-329)||(3146070-3146149)
chr8 (264-329)||(36355954-36356019)
chr8 (254-322)||(28207658-28207726)
chr8 (261-329)||(37427232-37427300)
chr8 (254-329)||(1135195-1135270)
chr8 (254-329)||(24695781-24695855)
chr8 (264-329)||(12684491-12684556)
chr8 (277-329)||(26750607-26750659)
chr8 (254-329)||(1369856-1369931)
chr8 (254-305)||(17081392-17081443)
chr8 (264-329)||(4384133-4384197)
chr8 (264-329)||(33949547-33949612)
chr8 (261-329)||(884458-884525)
[»] chr4 (23 HSPs)
chr4 (254-329)||(35777696-35777771)
chr4 (264-329)||(31429321-31429386)
chr4 (254-329)||(47995734-47995809)
chr4 (254-338)||(7852532-7852616)
chr4 (266-329)||(8297917-8297980)
chr4 (254-329)||(50341864-50341939)
chr4 (255-338)||(45900137-45900220)
chr4 (253-329)||(50427022-50427098)
chr4 (254-330)||(53014202-53014278)
chr4 (254-329)||(7444382-7444457)
chr4 (266-329)||(13585258-13585321)
chr4 (254-321)||(27953046-27953113)
chr4 (254-329)||(41462083-41462158)
chr4 (254-329)||(51834948-51835023)
chr4 (263-329)||(34391704-34391770)
chr4 (266-327)||(8261154-8261215)
chr4 (266-327)||(8274571-8274632)
chr4 (290-334)||(23605659-23605703)
chr4 (254-338)||(24175387-24175471)
chr4 (254-329)||(24229643-24229718)
chr4 (254-329)||(25115261-25115335)
chr4 (254-312)||(36702818-36702876)
chr4 (264-329)||(49400656-49400721)
[»] chr1 (5 HSPs)
chr1 (254-329)||(2864176-2864251)
chr1 (254-336)||(43397005-43397087)
chr1 (261-324)||(40460725-40460788)
chr1 (254-338)||(39150616-39150700)
chr1 (261-325)||(34409775-34409838)
[»] chr7 (15 HSPs)
chr7 (253-329)||(28770510-28770586)
chr7 (254-338)||(28663127-28663211)
chr7 (254-329)||(39320979-39321054)
chr7 (266-329)||(43224084-43224147)
chr7 (254-338)||(27123308-27123392)
chr7 (254-338)||(44537375-44537459)
chr7 (254-329)||(7653610-7653685)
chr7 (266-329)||(9718991-9719054)
chr7 (264-338)||(43234834-43234908)
chr7 (266-338)||(14651378-14651450)
chr7 (254-338)||(35496561-35496645)
chr7 (255-329)||(25886205-25886279)
chr7 (296-329)||(32051331-32051364)
chr7 (254-299)||(44592900-44592945)
chr7 (254-338)||(35731321-35731405)
[»] chr6 (8 HSPs)
chr6 (253-329)||(32823710-32823786)
chr6 (254-329)||(31855088-31855163)
chr6 (253-329)||(30801774-30801850)
chr6 (254-338)||(9762836-9762921)
chr6 (254-326)||(3766311-3766383)
chr6 (254-329)||(17215680-17215755)
chr6 (264-321)||(1841027-1841084)
chr6 (266-326)||(5446662-5446722)
[»] chr3 (6 HSPs)
chr3 (254-329)||(29083896-29083972)
chr3 (264-330)||(40673478-40673544)
chr3 (254-329)||(47638929-47639004)
chr3 (254-329)||(51351311-51351386)
chr3 (254-312)||(24791530-24791588)
chr3 (254-336)||(52249360-52249442)
[»] scaffold0268 (1 HSPs)
scaffold0268 (254-329)||(20246-20320)
[»] scaffold0036 (1 HSPs)
scaffold0036 (254-329)||(62522-62597)
[»] scaffold0004 (1 HSPs)
scaffold0004 (254-308)||(335866-335920)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 7e-65; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 80 - 332
Target Start/End: Original strand, 5524306 - 5524573
Alignment:
Q  80 gaagaatataaaagacttaggattcccacattcccctttggatggatggagttgataatttagttagtagtaggatagtatataatttggtttgatatct 179  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5524306 gaagaaaataaaagacttaggattcccacattcccctttggatggatggagttgataatttagttagtagtaggatagtatataatttggtttgatatct 5524405  T
Q  180 cacatcct-------------ggtaattaaaattaggattgcccttggagcattctttaagcatctcaaatatggta--nnnnnnnnngaaaagttaatt 264  Q
    |||||| |              |||||||||||||||||||  ||||| ||||||||||||||||  |||||| |||           ||||||||||||    
T  5524406 cacatctttctacgaagtttgtgtaattaaaattaggattggacttggggcattctttaagcatcctaaatatagtaattatttttttgaaaagttaatt 5524505  T
Q  265 attacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaa 332  Q
    ||||||| || ||||| |||||||||||||||||| |||||| | |||||||||||||||||||||||    
T  5524506 attacaacttttaatgcattcaatgcacaactttttatttaagatttactatttaaagtgcttaacaa 5524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 19890261 - 19890186
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||| |||| ||| ||| |||||||||||||| |||||||| ||||| ||||||||||    
T  19890261 aaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaaacttattattttaagtgcttaa 19890186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 31452407 - 31452344
Alignment:
Q  265 attacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||  |||| ||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  31452407 attacaattttcaatgcattcaatacacaactttt-attaaaaacttactatttaaagtgcttaa 31452344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 1334946 - 1334881
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||| |||| |||||||  |||| |||||||| ||||||||  |||||||||||||||    
T  1334946 tattacaatttccaatgcattcaatatacaatttttcattaaaaacttatcatttaaagtgcttaa 1334881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 9448998 - 9448941
Alignment:
Q  282 attcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccct 339  Q
    ||||||| |||||||||||||| ||||||||| |||||||||| ||||  ||||||||    
T  9448998 attcaatacacaacttttcattaaaaacttaccatttaaagtgtttaaagagtgccct 9448941  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 19514942 - 19514990
Alignment:
Q  291 acaacttttcatttaaaacttactatttaaagtgcttaacaagtgccct 339  Q
    |||||||||||| |||||||||| |||||||||||||||  ||||||||    
T  19514942 acaacttttcatataaaacttacaatttaaagtgcttaaagagtgccct 19514990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 4762384 - 4762466
Alignment:
Q  255 aaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgcc 337  Q
    ||||| || ||||| |||||  |||| ||||||| ||||| |||| ||| |||| ||||||||||||||| |||| |||||||    
T  4762384 aaagtcaactattataattttcaatgcattcaatacacaattttttattaaaaatttactatttaaagtgattaaaaagtgcc 4762466  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 15505606 - 15505648
Alignment:
Q  282 attcaatgcacaacttttcatttaaaacttactatttaaagtg 324  Q
    ||||||| ||||||||||||||  |||||||||||||||||||    
T  15505606 attcaatacacaacttttcattccaaacttactatttaaagtg 15505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 34904850 - 34904785
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||| ||||| ||| ||| || || |||||||| | ||||||| |||||||||||||||    
T  34904850 tattacaatttttaatgaatttaatacaaaatttttcattaataacttacaatttaaagtgcttaa 34904785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 30501212 - 30501128
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30501212 aaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 30501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 30541555 - 30541471
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| ||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30541555 aaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 30541471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 16667364 - 16667283
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtg 335  Q
    |||||| ||||||||||||||| |||  ||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||    
T  16667364 aaaagtcaattattacaatttccaatacattcaatacacaatttttcattaaaaacttactatttaaagtgcttaaaaagtg 16667283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 7719248 - 7719319
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtg 335  Q
    |||||||||||| ||| |||||||| |||||||||||||| |||||||| |||||||||||||||| |||||    
T  7719248 tattacaatttccaatatattcaatacacaacttttcattaaaaacttattatttaaagtgcttaaaaagtg 7719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 34899201 - 34899123
Alignment:
Q  261 aattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccct 339  Q
    |||||||||||||||||||| ||| |||  | |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  34899201 aattattacaatttctaatgcatttaatatataacttttcatttaaaacttactatttaaagtgtttaaagagtgccct 34899123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 18229674 - 18229599
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| |||||||||||| |||  |||||||  |||| |||||||| ||||||||| |||||||||||||||    
T  18229674 aaaagttaactattacaatttccaatacattcaataaacaatttttcattaaaaacttaccatttaaagtgcttaa 18229599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 7968447 - 7968508
Alignment:
Q  277 aatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||| ||| ||| |||||||||||||| |||||||||||||||||||||||||  |||||||    
T  7968447 aatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 7968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 9276642 - 9276577
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||| |||||  |||| ||||||| || ||||||||||| |||||||||||||||||||||||||    
T  9276642 tattataattttcaatgcattcaatacataacttttcattaaaaacttactatttaaagtgcttaa 9276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 30104849 - 30104913
Alignment:
Q  265 attacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||| |||| ||||||| |||||||||||||| ||||||||| | |||||||| ||||    
T  30104849 attacaatttccaatgcattcaatacacaacttttcattaaaaacttaccacttaaagtgtttaa 30104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 40530507 - 40530445
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactat 316  Q
    ||||||||| ||| ||||||||||||  ||||||| ||||||| |||||| ||||||||||||    
T  40530507 aaaagttaactatcacaatttctaattcattcaatacacaactattcattaaaaacttactat 40530445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 8208213 - 8208288
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| |||||||||||||| ||||| ||||| | || |||||||||| |||||||||  |||||| ||| ||||    
T  8208213 aaaagtcaattattacaatttttaatgcattcattacataacttttcatataaaacttatcatttaatgtgtttaa 8208288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 8221156 - 8221231
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||| ||  |||| ||||||| ||||| |||| ||| ||||||||||||||||| |||||||    
T  8221156 aaaagtcaactattacaactttcaatgcattcaatacacaattttttattaaaaacttactatttaaaatgcttaa 8221231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 39558827 - 39558757
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgc 336  Q
    |||||||||| |||| |||  || ||| |||||||| | ||||||||||||||||| ||||||| ||||||    
T  39558827 ttacaatttccaatgcatttgatacacgacttttcaataaaaacttactatttaaaatgcttaagaagtgc 39558757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 2258163 - 2258088
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||| |||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  2258163 aaaagttaatcattacaatttttaatgtatttaatacacaacttttcatttaaaacttaccatttaaagtgcttaa 2258088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 33067536 - 33067603
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaa 321  Q
    |||||| |||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||    
T  33067536 aaaagtcaattattacaatgtctaatgcattcaatacaaaacttttcatttaaaacttactatttaaa 33067603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 35901965 - 35902040
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| ||||||||||||||| |||| ||||||| || ||||||||||| |||||||| |||||||| |||||||    
T  35901965 aaaagtcaattattacaatttccaatgcattcaatacagaacttttcattaaaaacttattatttaaaatgcttaa 35902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 33013079 - 33013163
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||| |||||| ||||| |||||||||||||  | ||||||||| |||||||||||||  |||||||    
T  33013079 aaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttactaattaaagtgcttaaagagtgccc 33013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 27801298 - 27801223
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  |||| ||||| | |||||||||| ||| |||||||||||||||||||||||||    
T  27801298 aaaagtcaactattacaattttcaatgcattcattacacaactttttattaaaaacttactatttaaagtgcttaa 27801223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 42636438 - 42636363
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  |||| ||| ||| |||||||||||||| ||||||||| |||||||||||||||    
T  42636438 aaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtgcttaa 42636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 3146070 - 3146149
Alignment:
Q  254 aaaagttaattattacaatttctaatg----tattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| |||||||||||| ||||     |||||||||||| | ||||||| |||||||||||||||||||||||||    
T  3146070 aaaagttaactattacaatttccaatgcattcattcaatgcacaccgtttcattaaaaacttactatttaaagtgcttaa 3146149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 36356019 - 36355954
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||| |||||||||||| ||| ||| |||||||||||||| ||||||||| ||||||||| |||||    
T  36356019 tattgcaatttctaatgcatttaatacacaacttttcattaaaaacttaccatttaaagtacttaa 36355954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 28207658 - 28207726
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaag 322  Q
    |||||| || |||||||||||| |||| ||||||| |||||||||||||| ||||||| | ||||||||    
T  28207658 aaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaactttccatttaaag 28207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 37427232 - 37427300
Alignment:
Q  261 aattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||||||  |||||| ||||| | |||||||||||| ||| ||||| |||||||||||||||    
T  37427232 aattattacaattttcaatgtaatcaatactcaacttttcattaaaatcttaccatttaaagtgcttaa 37427300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 1135195 - 1135270
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  ||||||||||||  |||||||||| || ||||||||| |||||||||| ||||    
T  1135195 aaaagtcaactattacaattttcaatgtattcaatatacaacttttccttaaaaacttaccatttaaagtgtttaa 1135270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 24695781 - 24695855
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || ||||||||||||||||| | | ||| |||||||||| ||| |||||||||||||||||||| ||||    
T  24695781 aaaagtcaactattacaatttctaatgcagtgaatacacaactttttatt-aaaacttactatttaaagtgtttaa 24695855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 12684556 - 12684491
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||||||||| ||||| | || ||||||| ||| |||| ||| ||||||||||||||||    
T  12684556 tattacaatttctaatgcattcattacaaaacttttaattaaaaatttattatttaaagtgcttaa 12684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 26750607 - 26750659
Alignment:
Q  277 aatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||| |||||||||| || |||||||| ||| |||||||||||||||||||||    
T  26750607 aatgcattcaatgcataatttttcattaaaatcttactatttaaagtgcttaa 26750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 1369931 - 1369856
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || ||| |||||||| |||| |||||||  | |||||||||| ||||||||| || |||||||||||||    
T  1369931 aaaagtcaactatcacaatttccaatgcattcaatagataacttttcatataaaacttattaattaaagtgcttaa 1369856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 17081443 - 17081392
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcattta 305  Q
    |||||| || ||||||||||||||||| | | ||||||||||||||||||||    
T  17081443 aaaagtcaactattacaatttctaatgcaatgaatgcacaacttttcattta 17081392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 4384197 - 4384133
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||| |||| ||||||| |||||| ||||||| |||| |||  |||||||||||||||    
T  4384197 tattacaatttccaatgcattcaatacacaac-tttcattaaaaatttatcatttaaagtgcttaa 4384133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 33949612 - 33949547
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||| |||| | ||||| |||||||||||||  | ||||||||| |||||||| ||||    
T  33949612 tattacaatttcaaatgcactcaatacacaacttttcataaataacttactaattaaagtgtttaa 33949547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 884458 - 884525
Alignment:
Q  261 aattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||||||  |||| ||| ||| ||||| |||||||| ||||||| | |||||||||||||||    
T  884458 aattattacaattttcaatg-atttaatacacaatttttcattaaaaactttcaatttaaagtgcttaa 884525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 35777771 - 35777696
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  35777771 aaaagttaactattacaatttctaatgcattcaatacacaacttttcattaaaaacttaccatttaaagtgcttaa 35777696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 31429321 - 31429386
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  31429321 tattacaatttccaatgcattcaatacacaacttttcatttaaaacttactaattaaagtgcttaa 31429386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 47995809 - 47995734
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||||||||||||  |||| ||||||| || ||||||||||| ||||||||| |||||||||||||||    
T  47995809 aaaagttaattattacaattttcaatgcattcaatacataacttttcattaaaaacttacaatttaaagtgcttaa 47995734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 7852616 - 7852532
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||| |||| |||||||||||  |||| ||| ||| |||||||||||||| |||||||||||||||||||||||||  |||||||    
T  7852616 aaaaattaactattacaattttcaatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 7852532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 8297917 - 8297980
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||| |||| ||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  8297917 ttacaatttccaatgcattcaatacacaatttttcattaaaaacttactatttaaagtgcttaa 8297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 50341939 - 50341864
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||| || | ||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  50341939 aaaagtcaactattacaatttccaacgcattcaatacacaacttttcatttaaaatttactatataaagtgcttaa 50341864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 45900220 - 45900137
Alignment:
Q  255 aaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    ||||| || ||| |||||||| |||| ||||||| ||||||||||||| | |||||||||| |||||||||||||  |||||||    
T  45900220 aaagtcaactatcacaatttccaatgcattcaatacacaacttttcatatgaaacttactaattaaagtgcttaaagagtgccc 45900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 50427022 - 50427098
Alignment:
Q  253 gaaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||| || |||||||||||| |||| | ||||  |||||||||||||| |||| ||||||||||||||| ||||    
T  50427022 gaaaagtcaactattacaatttccaatgcaatcaacacacaacttttcattaaaaatttactatttaaagtgtttaa 50427098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 53014278 - 53014202
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaac 330  Q
    |||| |||| |||||||||||| |||  ||||||| |||||||||| ||| ||||| ||| ||||||||||||||||    
T  53014278 aaaaattaactattacaatttccaatacattcaatacacaactttttattaaaaacataccatttaaagtgcttaac 53014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 7444457 - 7444382
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  |||| ||||||| ||||||||||| || |||||||| ||||||||||| ||||    
T  7444457 aaaagtcaactattacaattttcaatgcattcaatacacaacttttctttaaaaacttagtatttaaagtgtttaa 7444382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 13585321 - 13585258
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||  |||||||||| | || |||||||||| |||||||||| |||||||||||||||    
T  13585321 ttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaa 13585258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 27953113 - 27953046
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaa 321  Q
    ||||||||| |||||||||||  |||| ||||||| ||||||||||| || ||||||||| |||||||    
T  27953113 aaaagttaactattacaattttcaatgcattcaatacacaacttttcgttaaaaacttaccatttaaa 27953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 41462083 - 41462158
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || ||||||||||||| ||| ||| ||| || || |||||||| ||||||||||||||||| |||||||    
T  41462083 aaaagtcaactattacaatttcttatgcatttaatacataatttttcattaaaaacttactatttaaaatgcttaa 41462158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 51834948 - 51835023
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || ||||| |||||| |||| ||| ||| |||||||||||||| |||| ||||||||||||||| ||||    
T  51834948 aaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactatttaaagtgtttaa 51835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 34391770 - 34391704
Alignment:
Q  263 ttattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||||||| |||| | ||||| |||||||||| ||| |||||||||||||| ||||| ||||    
T  34391770 ttattacaatttccaatgcaatcaatacacaactttttattaaaaacttactattttaagtgtttaa 34391704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 8261154 - 8261215
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgctt 327  Q
    |||||||||  |||| ||| ||| || ||||||||||| |||||||||||||||||||||||    
T  8261154 ttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgctt 8261215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 8274571 - 8274632
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgctt 327  Q
    |||||||||  |||| ||| ||| || ||||||||||| |||||||||||||||||||||||    
T  8274571 ttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgctt 8274632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 23605703 - 23605659
Alignment:
Q  290 cacaacttttcatttaaaacttactatttaaagtgcttaacaagt 334  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||    
T  23605703 cacaacttttcattaaaaacttaccatttaaagtgcttaaaaagt 23605659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 24175471 - 24175387
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||  |||| ||| ||| ||||||||||| |  ||||||||| |||||||||||||||  |||||||    
T  24175471 aaaagtaaactattacaattttaaatgcatttaatacacaacttttcgtacaaaacttaccatttaaagtgcttaaagagtgccc 24175387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 24229718 - 24229643
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| |||||| |||||||  |||| ||| ||| ||||| |||||||| |||||||  ||||||||||||||||    
T  24229718 aaaagtaaattatcacaattttcaatgcatttaatacacaatttttcattaaaaactttttatttaaagtgcttaa 24229643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 25115335 - 25115261
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| |||||||||||| |||| | | ||| |||||||||| | | |||||||||||||||||||| ||||    
T  25115335 aaaagttaactattacaatttccaatgcagtgaatacacaacttttta-taaaaacttactatttaaagtgtttaa 25115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 36702818 - 36702876
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaactta 312  Q
    |||||| ||||||||||||||  |||| ||||||| ||||| |||||||| ||||||||    
T  36702818 aaaagtcaattattacaattttcaatgcattcaatacacaatttttcattaaaaactta 36702876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 49400656 - 49400721
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||||| |||||||| ||| ||| |||||||||| |||  ||  ||||||||||||||||    
T  49400656 tattacaatttccaatgtatttaatacacgacttttcattaaaattttgttatttaaagtgcttaa 49400721  T

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Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 2864176 - 2864251
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  2864176 aaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactatttaaagtgcttaa 2864251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 43397087 - 43397005
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgc 336  Q
    |||||| || ||||| |||||| |||| ||| ||| |||||||||||||| |||||||||||||||||||| ||||| |||||    
T  43397087 aaaagtcaactattataatttccaatgcatttaatacacaacttttcattaaaaacttactatttaaagtgtttaacgagtgc 43397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 40460788 - 40460725
Alignment:
Q  261 aattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtg 324  Q
    |||||||||| |||| ||| ||||||||  |||| |||||||| ||||||||||||||||||||    
T  40460788 aattattacagtttccaatttattcaatatacaatttttcattaaaaacttactatttaaagtg 40460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 39150616 - 39150700
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||  |||| ||||||| || || |||||||| ||| ||||||| |||||||||||||  |||||||    
T  39150616 aaaagtcaactattacaatttacaatgcattcaatacataaattttcattaaaatcttactagttaaagtgcttaaagagtgccc 39150700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 34409775 - 34409838
Alignment:
Q  261 aattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgc 325  Q
    |||||||| |||||| |||| ||||||| ||||  |||||||| ||||||||| |||||||||||    
T  34409775 aattattataatttccaatgcattcaatacacat-ttttcattaaaaacttaccatttaaagtgc 34409838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 28770510 - 28770586
Alignment:
Q  253 gaaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||| || |||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  28770510 gaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactatttagagtgcttaa 28770586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 28663211 - 28663127
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||  |||| ||||||| ||||| |||||||| ||| |||||||||||||||||||||  |||||||    
T  28663211 aaaagtcaactattacaattttcaatgcattcaatacacaatttttcattaaaaccttactatttaaagtgcttaaagagtgccc 28663127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 39321054 - 39320979
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  |||||||||||| |||||||||| ||  ||||||||||| |||||||||||||    
T  39321054 aaaagtcaactattacaattttcaatgtattcaatacacaacttttaataaaaaacttactaattaaagtgcttaa 39320979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 43224147 - 43224084
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||| |||||||  ||| |||||||||||||| ||||||| |||||||||||||||||    
T  43224147 ttacaatttccaatgtatgtaatacacaacttttcattaaaaacttgctatttaaagtgcttaa 43224084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 27123308 - 27123392
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||| |||| ||| | | ||||||||||| || ||||||||| |||||||||||||||  |||||||    
T  27123308 aaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaacttaccatttaaagtgcttaaagagtgccc 27123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 44537375 - 44537459
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || ||||| |||||| | |||||  ||| || ||||||||||| |||||||||||||||||||||||||  |||||||    
T  44537375 aaaagtcaactattataatttccattgtatataatacataacttttcattaaaaacttactatttaaagtgcttaaagagtgccc 44537459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 7653610 - 7653685
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || ||||| |||||| |||  ||||| | |||||||||||||| |||||||||| ||||||||||||||    
T  7653610 aaaagtcaactattataatttccaattcattcattacacaacttttcattaaaaacttactttttaaagtgcttaa 7653685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 9719054 - 9718991
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||||  |||||||||| | || |||||||||| |||||||||| |||||||||||||||    
T  9719054 ttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaa 9718991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 43234834 - 43234908
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||||||||| | |  ||||||| || ||||||||||| |||| ||||||||||||||||||||  |||||||    
T  43234834 tattacaatttccattacattcaatacataacttttcattaaaaatttactatttaaagtgcttaaagagtgccc 43234908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 14651450 - 14651378
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||||||| |||| | ||| | |||||||||||||| ||||| |||||||| ||||||||||  |||||||    
T  14651450 ttacaatttccaatgcaatcattacacaacttttcattaaaaacctactattttaagtgcttaaagagtgccc 14651378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 35496645 - 35496561
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||  |||| ||||| | ||||| |||||||| ||||||||| |||||||||| ||||  |||||||    
T  35496645 aaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccatttaaagtgtttaaagagtgccc 35496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 25886205 - 25886279
Alignment:
Q  255 aaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||| || |||||||||||  |||  ||| ||| ||||||||||||| |||||||||| |||||||||| ||||    
T  25886205 aaagtcaactattacaattttcaatacatttaatacacaacttttcatataaaacttaccatttaaagtgtttaa 25886279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Complemental strand, 32051364 - 32051331
Alignment:
Q  296 ttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||||| |||||||||||||||||||||||||    
T  32051364 ttttcattaaaaacttactatttaaagtgcttaa 32051331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 44592900 - 44592945
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaactttt 299  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||    
T  44592900 aaaagttaactattacaattttcaatgtattcaatacacaactttt 44592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 35731321 - 35731405
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| || |||||||||||| |||| | | ||| |||||||||| ||  | ||||||||| |||||||||||||  |||||||    
T  35731321 aaaagtcaactattacaatttccaatgcacttaatacacaactttttataaagaacttactaattaaagtgcttaaagagtgccc 35731405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 32823710 - 32823786
Alignment:
Q  253 gaaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||| ||||||||||||||  |||| ||||||| |||||||||||||| |||||||  ||||||||||||||||    
T  32823710 gaaaagtcaattattacaattttcaatgcattcaatacacaacttttcattaaaaacttgttatttaaagtgcttaa 32823786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 31855088 - 31855163
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||| |||| |||||||  |||| |||||||| |||||||||||||||||||||||||    
T  31855088 aaaagtcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttactatttaaagtgcttaa 31855163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 30801774 - 30801850
Alignment:
Q  253 gaaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| ||| ||||| |||||  |||| ||||||| |||||||||| ||| ||||||| |||||||||||||||||    
T  30801774 gaaaagctaagtattataattttcaatgcattcaatacacaacttttaattaaaaacttgctatttaaagtgcttaa 30801850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 9762836 - 9762921
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcattt-aaaacttactatttaaagtgcttaacaagtgccc 338  Q
    |||||| |||||||| ||||||||||  ||||| | ||||||||||||||| |||| |||| |||||||||| ||||  |||||||    
T  9762836 aaaagtcaattattataatttctaatacattcagtacacaacttttcatttaaaaatttaccatttaaagtgattaaagagtgccc 9762921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 3766311 - 3766383
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgct 326  Q
    |||||| |||||||||||||| ||||  ||||| | || |||||||||| |||||||||  ||||||||||||    
T  3766311 aaaagtcaattattacaatttataatacattcattacataacttttcatataaaacttatcatttaaagtgct 3766383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 17215755 - 17215680
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||||||||  |||| |||||||  |||| |||| ||| ||||||||| |||||||||||||||    
T  17215755 aaaagtcaactattacaattttcaatgcattcaataaacaattttttattaaaaacttaccatttaaagtgcttaa 17215680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 1841027 - 1841084
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaa 321  Q
    |||||||||||| |||| ||||||| |||||||||| ||| ||||||||  |||||||    
T  1841027 tattacaatttccaatgcattcaatacacaacttttaattaaaaacttatcatttaaa 1841084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 326
Target Start/End: Complemental strand, 5446722 - 5446662
Alignment:
Q  266 ttacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgct 326  Q
    |||||||||  |||| ||||||||||| |||||| ||| |||| || ||||||||||||||    
T  5446722 ttacaattttcaatgcattcaatgcaccacttttaattaaaaaattgctatttaaagtgct 5446662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 29083972 - 29083896
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttacta-tttaaagtgcttaa 329  Q
    ||||||||| ||||||||||| ||||| ||| ||| |||||||||||| | ||||||||||| ||||||||||||||    
T  29083972 aaaagttaactattacaatttttaatgcatttaatacacaacttttcaataaaaacttactattttaaagtgcttaa 29083896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 40673478 - 40673544
Alignment:
Q  264 tattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaac 330  Q
    |||||||||||||||| |||||||| ||| ||||||| || ||||||||  ||||||||||||||||    
T  40673478 tattacaatttctaatatattcaatacactacttttctttaaaaacttatcatttaaagtgcttaac 40673544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 47638929 - 47639004
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| ||||||||||| ||||| | ||||| ||||| |||||||  | ||||||||| ||||| |||||||    
T  47638929 aaaagttaactattacaatttttaatgcactcaatacacaatttttcataaagaacttactaattaaaatgcttaa 47639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 51351311 - 51351386
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||| | ||||| |||||| |||  ||| ||| ||||| |||||||| |||||||||| ||||||||||||||    
T  51351311 aaaagtttagtattataatttccaatacatttaatacacaatttttcattaaaaacttactttttaaagtgcttaa 51351386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 24791530 - 24791588
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaactta 312  Q
    |||||| || |||||||||||  |||||||||||| || ||||||||||| ||||||||    
T  24791530 aaaagtcaactattacaattttcaatgtattcaatacataacttttcattaaaaactta 24791588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 52249360 - 52249442
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaacaagtgc 336  Q
    ||||||||| ||||||||| |||||| ||||||||  |||||||||  |  | |||||| || ||||||||||||| ||||||    
T  52249360 aaaagttaactattacaatctctaatatattcaatatacaactttttttaaataacttattaattaaagtgcttaaaaagtgc 52249442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 20320 - 20246
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    ||||||||| |||||||||||| |||| ||| ||| |||||||||||| | ||||||||  |||||||||||||||    
T  20320 aaaagttaactattacaatttcaaatgcattaaatacacaacttttca-taaaaacttatcatttaaagtgcttaa 20246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 62597 - 62522
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaacttactatttaaagtgcttaa 329  Q
    |||||| || |||||| ||||  |||| ||||||| || || |||| ||| |||||||||||||||||||||||||    
T  62597 aaaagtcaactattacgattttcaatgcattcaatacataattttttattaaaaacttactatttaaagtgcttaa 62522  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 335920 - 335866
Alignment:
Q  254 aaaagttaattattacaatttctaatgtattcaatgcacaacttttcatttaaaa 308  Q
    ||||||||||||||| |||||  ||||||||| || |||||||||||||| ||||    
T  335920 aaaagttaattattataattttcaatgtattcgatacacaacttttcattaaaaa 335866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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