View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0919_low_41 (Length: 249)
Name: NF0919_low_41
Description: NF0919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0919_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 47067620 - 47067460
Alignment:
| Q |
25 |
aaatgtcacaaaatatgaattgacatttgcaaaatcttcacccttgtctaagcaatgtctcttctttatctctcttacccttcttcttgttatttacctt |
124 |
Q |
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| T |
47067620 |
aaatgtcacaaaatatgaattgacatttgcaaaatcttcacccttgtctaagcaatgtctcttctttatctctcttacccttcttcttgttatttacctt |
47067521 |
T |
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| Q |
125 |
cacattacttcatgtgcatgagccacaccacttcaccaaatggggtggctgcaatcccttt |
185 |
Q |
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| T |
47067520 |
cacattacttcatgtgcatgagccacaccacttcaccaaatggggtggctgcaatcccttt |
47067460 |
T |
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