View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0920_low_16 (Length: 339)
Name: NF0920_low_16
Description: NF0920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0920_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 16501777 - 16501510
Alignment:
| Q |
1 |
aaatacaaaaaagaataatgatcagttacaaactatcttacaagagaaagttttgagttctaataactaacaattgaagaaggaaatgctgcatctcatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16501777 |
aaatacaaaaaagaataatgatcagttacaaactatcttacaagagaaagttttgagttctaataactaacaattgaagaaggaaatgctgcatctcatt |
16501678 |
T |
|
| Q |
101 |
ctaacgattgaaatgttctaaacttgcatattattaatcaaacatgaaaaaatacaaaagcgaattttattttcctcatacctctgacctttccaacctt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
16501677 |
ctaacgattgaaatgttctaaacttgcatattattaatcaaacatgaaaaaatacaaaagcgaattttattttcctcatacctctgacctttccaacctt |
16501578 |
T |
|
| Q |
201 |
ctccagcgtaagcatcgataagattctgttcttgcttcattctgattaagatattccttgttcatctc |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
16501577 |
ctccagcgtaagcatcgataagattctgttcttgcttcattctgattaagatattccttgttcttctc |
16501510 |
T |
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