View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0920_low_30 (Length: 223)
Name: NF0920_low_30
Description: NF0920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0920_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25015409 - 25015266
Alignment:
| Q |
1 |
ccttgtttatatttgaatcattgtttcatacaatttaattatgnnnnnnnnnnnnnnn--aatatttgattctggattgatttgattctgtttgctgatt |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25015409 |
ccttgtttatatttgaatcattgtttcatacaatttaattatgatttttttattttttttaatatttgattctggattgatttgattctgtttgctgatt |
25015310 |
T |
|
| Q |
99 |
gttacttcaaatattgcagacaaattgccttcttctctgctcct |
142 |
Q |
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||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
25015309 |
gttacttcaaatattgcagacaaattgccttcttcactggtcct |
25015266 |
T |
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