View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0921_low_29 (Length: 266)
Name: NF0921_low_29
Description: NF0921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0921_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 30 - 253
Target Start/End: Original strand, 13590271 - 13590494
Alignment:
| Q |
30 |
attaattttctccattgagttaaacacgaacagattggtgtaaatcatccttatcactagccaatacaaagaagttgtgatagaaccaaaatattataac |
129 |
Q |
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| T |
13590271 |
attaattttctccattgagttaaacacgaacagattggtgtaaatcatccttatcactagccaatacaaagaagttgtgatagaaccaaaatattataac |
13590370 |
T |
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| Q |
130 |
aaagcaaactacaaaatcattatgttaccgaaaaatatgttatcgaaatcaaatacatcaatgcatccagaatcaaccttgctctttgatcaataagaac |
229 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13590371 |
aaagcaaactacaaaatcattatgttaccgaagaatatgttatcgaaatcaaatacatcaatgcatccagaatcaaccttgctctttgatcaataagaac |
13590470 |
T |
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| Q |
230 |
aaccattcacacaaaatcaaatat |
253 |
Q |
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|||||||||||||||||||||||| |
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| T |
13590471 |
aaccattcacacaaaatcaaatat |
13590494 |
T |
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