View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0922_high_28 (Length: 310)
Name: NF0922_high_28
Description: NF0922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0922_high_28 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 33662119 - 33662386
Alignment:
| Q |
29 |
aggcctatgtataatgagctacgaaaatgtttgttctagannnnnnnnnaaagaattggttttagatgttaaatggtgcaaatgaaatgatatagttcaa |
128 |
Q |
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| T |
33662119 |
aggcctatgtataatgagctacgaaaatgtttgttctagatttttttttaaagaattggttttagatgttaagtggtgcaaatgaaatgatatagttcaa |
33662218 |
T |
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| Q |
129 |
aacatttcaaatgttaaacaaaataaactttacaaacattcctgaatttttgtaattattaattaaagacgttgacatgaataagaatttagtatcatat |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33662219 |
aacatttcaaatgttaaacaaaataaactttacaaacattcctgaatttttttaattattaattaaagacgttgacatgaataagaatttagtatcatat |
33662318 |
T |
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| Q |
229 |
ggttgtgattttaatttgttctaggaagaaaagaatatggtttttccggaacttctttgccgtcaata |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33662319 |
ggttgtgattttaatttgttctaggaagaaaagaatatggtttttccggaacttctttgccgtcaata |
33662386 |
T |
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