View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0922_low_3 (Length: 661)
Name: NF0922_low_3
Description: NF0922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0922_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 552; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 552; E-Value: 0
Query Start/End: Original strand, 11 - 632
Target Start/End: Original strand, 24357993 - 24358595
Alignment:
| Q |
11 |
cacagacagaaagcaattatagaccaaaaatagatggaattcatattaagtaccggaaactctttccttattcatgttgatttttagtaatgcaatatat |
110 |
Q |
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| T |
24357993 |
cacagacagatagcaattatagaccaaaaatagatggaattcatattaagtaccggaaactctttccttattcatgttgatttttagtaatgcaatatat |
24358092 |
T |
|
| Q |
111 |
aaaattgcagacaattggatttatggggccagctgttaccttgatctgcttgaattacgccaatacaccaacaatggcagctacactcttgactgcagct |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24358093 |
aaaattgcagacaattggatttatggggccagctgttaccttgatctgcttgaattacgccaatacaccaacaatggcagctacactcttgactgcagct |
24358192 |
T |
|
| Q |
211 |
ttaagcttaagctctttcagtcaagctggttttatgctcaacatacaagtaagtccagcacacaaaaatctgaatatactctaaaactttaaacattata |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24358193 |
ttaagcttaagctctttcagtcaagctggttttatgctcaacatacaagtaagtccagcacacaaaaatctgaatat-------------------tata |
24358273 |
T |
|
| Q |
311 |
tttatgacatttcatgaacttagaaatatatgagtaacctttcacattttacatattcaggacattgctccacagtatgcaggaattttacatggtaaga |
410 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24358274 |
tttatgacatttcatgaacttagaaatatatcagtaacctttcacattttacatattcaggacattgctccacagtatgcaggaattttacatggtaaga |
24358373 |
T |
|
| Q |
411 |
acttaagaaaatgtgtttggaatgtcttccctttttctaaattaagtcgttgtttttacatcatggatcatgtattaacattaaagaaactattacagga |
510 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24358374 |
acttaagaaaatgtgtttggaatgtcttccctttttctaaattaagtcgttgtttttacatcatggatcatgtattaacattaaagaaactattacagga |
24358473 |
T |
|
| Q |
511 |
atatcaaattcagctggaactttagcagctatcataagcacaattggaactggttattttgtacaatggttgggatcatttcaagcattcctaactataa |
610 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24358474 |
atatcaaattcagctggaactttagcagctatcataagcacaattggaactggttattttgtacaatggttgggatcatttcaagcattcctaactataa |
24358573 |
T |
|
| Q |
611 |
cagcatgtctctatgttgtgac |
632 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
24358574 |
cagcatgtctctatgttgtgac |
24358595 |
T |
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