View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0922_low_39 (Length: 331)

Name: NF0922_low_39
Description: NF0922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0922_low_39
NF0922_low_39
[»] chr1 (57 HSPs)
chr1 (1-204)||(37240603-37240805)
chr1 (190-320)||(37240828-37240958)
chr1 (206-277)||(30257685-30257756)
chr1 (203-284)||(6292492-6292573)
chr1 (204-277)||(25479581-25479654)
chr1 (205-278)||(10199404-10199477)
chr1 (204-285)||(27140478-27140559)
chr1 (199-272)||(31517742-31517815)
chr1 (207-267)||(45975693-45975753)
chr1 (199-258)||(4700082-4700141)
chr1 (199-270)||(14629970-14630041)
chr1 (211-278)||(24460403-24460470)
chr1 (237-284)||(30815643-30815690)
chr1 (199-278)||(34290231-34290310)
chr1 (204-278)||(7136994-7137068)
chr1 (199-269)||(51695500-51695570)
chr1 (204-272)||(7472311-7472380)
chr1 (211-284)||(35925697-35925770)
chr1 (237-278)||(37593680-37593721)
chr1 (240-284)||(4481966-4482010)
chr1 (199-283)||(4622088-4622172)
chr1 (199-267)||(9656645-9656713)
chr1 (200-272)||(15558213-15558285)
chr1 (237-285)||(28689441-28689489)
chr1 (213-284)||(4699605-4699676)
chr1 (199-258)||(5090857-5090916)
chr1 (199-278)||(7218070-7218149)
chr1 (223-270)||(15361059-15361106)
chr1 (199-258)||(15361708-15361767)
chr1 (237-284)||(31118076-31118123)
chr1 (204-271)||(39347970-39348037)
chr1 (236-278)||(1509961-1510003)
chr1 (204-258)||(2522629-2522683)
chr1 (200-278)||(5886990-5887068)
chr1 (210-284)||(12641718-12641792)
chr1 (211-285)||(15437970-15438044)
chr1 (199-269)||(27820342-27820412)
chr1 (204-270)||(35351039-35351105)
chr1 (204-269)||(6102154-6102219)
chr1 (237-278)||(10809378-10809419)
chr1 (211-284)||(10854740-10854813)
chr1 (199-256)||(25944427-25944484)
chr1 (199-264)||(34179882-34179947)
chr1 (213-286)||(35351281-35351354)
chr1 (199-284)||(37842345-37842430)
chr1 (237-278)||(46252678-46252719)
chr1 (206-278)||(1565531-1565603)
chr1 (204-284)||(10744301-10744381)
chr1 (204-284)||(11639406-11639486)
chr1 (199-271)||(12564877-12564949)
chr1 (200-308)||(27963336-27963444)
chr1 (237-285)||(33723371-33723419)
chr1 (237-269)||(38503470-38503502)
chr1 (199-271)||(39270428-39270500)
chr1 (210-278)||(41195189-41195257)
chr1 (237-277)||(47877142-47877182)
chr1 (202-266)||(51929783-51929847)
[»] chr5 (34 HSPs)
chr5 (199-285)||(41957440-41957526)
chr5 (205-278)||(17258879-17258952)
chr5 (204-269)||(7984969-7985034)
chr5 (205-269)||(4014429-4014493)
chr5 (199-286)||(10272419-10272506)
chr5 (204-271)||(11615501-11615568)
chr5 (199-278)||(25461312-25461391)
chr5 (211-285)||(7674655-7674729)
chr5 (199-276)||(8938641-8938718)
chr5 (204-277)||(11707055-11707128)
chr5 (199-284)||(36318769-36318854)
chr5 (207-272)||(36638750-36638815)
chr5 (243-315)||(12595675-12595747)
chr5 (204-264)||(16889735-16889795)
chr5 (204-284)||(17368676-17368756)
chr5 (169-278)||(32194075-32194180)
chr5 (210-265)||(1019475-1019530)
chr5 (204-267)||(3237093-3237156)
chr5 (237-284)||(10125708-10125755)
chr5 (199-278)||(18543193-18543271)
chr5 (211-285)||(2092534-2092608)
chr5 (235-285)||(11700367-11700417)
chr5 (237-283)||(12467166-12467212)
chr5 (204-270)||(28413288-28413354)
chr5 (237-315)||(31694551-31694629)
chr5 (206-284)||(40205064-40205142)
chr5 (199-284)||(2568653-2568738)
chr5 (211-272)||(37611217-37611278)
chr5 (211-272)||(37787947-37788008)
chr5 (211-256)||(40731476-40731521)
chr5 (236-284)||(1899186-1899234)
chr5 (199-267)||(7907876-7907944)
chr5 (204-256)||(8481218-8481270)
chr5 (204-272)||(10771890-10771958)
[»] chr3 (45 HSPs)
chr3 (199-285)||(1217789-1217875)
chr3 (204-309)||(53736085-53736190)
chr3 (199-278)||(39602206-39602285)
chr3 (199-285)||(43115051-43115137)
chr3 (199-272)||(40665424-40665497)
chr3 (204-272)||(20669172-20669240)
chr3 (199-267)||(28622006-28622074)
chr3 (207-303)||(31010405-31010501)
chr3 (213-265)||(34414793-34414845)
chr3 (211-278)||(24785212-24785279)
chr3 (237-272)||(36887537-36887572)
chr3 (199-285)||(41724206-41724293)
chr3 (211-285)||(30923887-30923961)
chr3 (199-284)||(3015833-3015918)
chr3 (204-285)||(3044248-3044329)
chr3 (237-285)||(5396230-5396278)
chr3 (199-271)||(36646385-36646457)
chr3 (201-272)||(53952042-53952116)
chr3 (214-285)||(482781-482852)
chr3 (199-278)||(1816578-1816657)
chr3 (238-277)||(2128255-2128294)
chr3 (237-284)||(5391912-5391959)
chr3 (237-272)||(33883752-33883787)
chr3 (237-284)||(36101601-36101648)
chr3 (237-284)||(36139911-36139958)
chr3 (237-284)||(39723230-39723277)
chr3 (214-284)||(2152168-2152238)
chr3 (211-285)||(9279315-9279389)
chr3 (199-265)||(13709832-13709898)
chr3 (204-258)||(20502084-20502138)
chr3 (204-270)||(25453863-25453929)
chr3 (243-277)||(42545679-42545713)
chr3 (199-277)||(52618998-52619076)
chr3 (196-265)||(2719460-2719529)
chr3 (204-269)||(21367667-21367732)
chr3 (237-278)||(25925775-25925816)
chr3 (235-284)||(38318991-38319040)
chr3 (237-274)||(40321069-40321106)
chr3 (199-271)||(237392-237464)
chr3 (204-272)||(22214661-22214729)
chr3 (211-271)||(30573917-30573977)
chr3 (205-285)||(37273135-37273215)
chr3 (218-258)||(41155181-41155221)
chr3 (204-272)||(41644447-41644515)
chr3 (237-277)||(45432936-45432976)
[»] chr8 (46 HSPs)
chr8 (211-284)||(12851183-12851256)
chr8 (204-315)||(11569416-11569527)
chr8 (199-270)||(31705080-31705151)
chr8 (203-305)||(5069696-5069798)
chr8 (199-285)||(11415149-11415235)
chr8 (204-265)||(30277254-30277315)
chr8 (210-278)||(20672756-20672824)
chr8 (199-265)||(8062324-8062390)
chr8 (199-272)||(30389094-30389167)
chr8 (204-284)||(779051-779131)
chr8 (204-267)||(27028831-27028894)
chr8 (199-270)||(28769343-28769414)
chr8 (183-268)||(8060647-8060733)
chr8 (199-269)||(9956819-9956889)
chr8 (199-257)||(29973076-29973134)
chr8 (199-265)||(31862488-31862554)
chr8 (204-278)||(37353245-37353319)
chr8 (199-272)||(10075553-10075626)
chr8 (213-285)||(9540985-9541057)
chr8 (202-278)||(34290867-34290943)
chr8 (204-284)||(42215296-42215376)
chr8 (237-284)||(2594987-2595034)
chr8 (199-278)||(11795087-11795166)
chr8 (199-258)||(36338278-36338337)
chr8 (213-272)||(42215084-42215143)
chr8 (236-286)||(4281578-4281628)
chr8 (243-285)||(11185260-11185302)
chr8 (199-304)||(30987961-30988067)
chr8 (237-278)||(3161619-3161660)
chr8 (243-284)||(3254264-3254305)
chr8 (199-304)||(6509273-6509378)
chr8 (199-284)||(13459640-13459725)
chr8 (205-278)||(14905613-14905686)
chr8 (213-278)||(25869262-25869327)
chr8 (204-285)||(30191130-30191211)
chr8 (204-305)||(31875564-31875665)
chr8 (204-269)||(33714241-33714306)
chr8 (197-265)||(1433541-1433609)
chr8 (211-271)||(2458569-2458629)
chr8 (226-278)||(2492958-2493010)
chr8 (199-267)||(8062519-8062587)
chr8 (204-264)||(11183545-11183605)
chr8 (204-264)||(11745662-11745722)
chr8 (198-258)||(21130608-21130668)
chr8 (199-271)||(31804457-31804529)
chr8 (224-284)||(41606893-41606953)
[»] chr4 (36 HSPs)
chr4 (199-272)||(7694012-7694085)
chr4 (204-284)||(1137712-1137792)
chr4 (205-285)||(52746829-52746909)
chr4 (199-305)||(2996568-2996674)
chr4 (217-295)||(29467603-29467681)
chr4 (214-284)||(44249295-44249365)
chr4 (204-285)||(24929493-24929574)
chr4 (199-268)||(51630106-51630175)
chr4 (199-248)||(56480343-56480392)
chr4 (205-285)||(29263371-29263451)
chr4 (199-271)||(43824278-43824350)
chr4 (199-270)||(17884063-17884134)
chr4 (199-270)||(42866063-42866134)
chr4 (206-273)||(55084482-55084549)
chr4 (204-278)||(6978958-6979032)
chr4 (238-272)||(24747353-24747387)
chr4 (204-278)||(27721717-27721791)
chr4 (204-270)||(47800623-47800689)
chr4 (235-277)||(48719388-48719430)
chr4 (199-265)||(49219134-49219200)
chr4 (204-270)||(53673662-53673728)
chr4 (218-264)||(53792585-53792631)
chr4 (235-284)||(1312872-1312921)
chr4 (204-269)||(1706622-1706687)
chr4 (235-304)||(20935994-20936063)
chr4 (211-284)||(20936219-20936292)
chr4 (218-315)||(22236064-22236161)
chr4 (204-273)||(35064855-35064924)
chr4 (207-284)||(35958658-35958734)
chr4 (199-271)||(10192279-10192350)
chr4 (202-278)||(11264299-11264375)
chr4 (204-256)||(16199999-16200051)
chr4 (240-284)||(37864342-37864386)
chr4 (224-272)||(45732693-45732741)
chr4 (226-266)||(45738099-45738139)
chr4 (200-272)||(46415794-46415866)
[»] chr6 (34 HSPs)
chr6 (202-278)||(6647385-6647461)
chr6 (199-277)||(4247058-4247136)
chr6 (198-284)||(31624084-31624170)
chr6 (199-270)||(4006709-4006780)
chr6 (199-258)||(31671090-31671149)
chr6 (203-258)||(33911298-33911353)
chr6 (215-326)||(34939755-34939866)
chr6 (204-286)||(2112200-2112282)
chr6 (199-284)||(769134-769218)
chr6 (243-284)||(22743520-22743561)
chr6 (199-268)||(24782054-24782123)
chr6 (195-284)||(28641739-28641828)
chr6 (199-278)||(281844-281923)
chr6 (237-284)||(696635-696682)
chr6 (238-277)||(821833-821872)
chr6 (237-316)||(6963037-6963116)
chr6 (200-266)||(35070475-35070541)
chr6 (201-258)||(1497978-1498035)
chr6 (237-286)||(4420676-4420725)
chr6 (237-278)||(6536980-6537021)
chr6 (205-278)||(7446327-7446400)
chr6 (197-286)||(8010350-8010439)
chr6 (237-278)||(9027611-9027652)
chr6 (231-284)||(10616703-10616756)
chr6 (237-278)||(13908496-13908537)
chr6 (205-278)||(21024212-21024285)
chr6 (204-285)||(32386095-32386176)
chr6 (212-284)||(3528811-3528883)
chr6 (206-278)||(9323492-9323564)
chr6 (204-272)||(14492302-14492370)
chr6 (213-273)||(17241253-17241313)
chr6 (213-285)||(30523668-30523740)
chr6 (236-280)||(34404719-34404763)
chr6 (202-266)||(34430469-34430533)
[»] chr2 (39 HSPs)
chr2 (206-284)||(41817170-41817248)
chr2 (204-272)||(5759576-5759645)
chr2 (199-272)||(22681187-22681260)
chr2 (213-284)||(787341-787412)
chr2 (199-270)||(1625895-1625966)
chr2 (203-285)||(10567056-10567138)
chr2 (204-266)||(11488277-11488339)
chr2 (211-269)||(35379021-35379079)
chr2 (204-269)||(9174815-9174880)
chr2 (199-272)||(10198482-10198555)
chr2 (207-272)||(19333327-19333392)
chr2 (199-284)||(33941904-33941989)
chr2 (213-270)||(44443330-44443387)
chr2 (204-268)||(3235390-3235454)
chr2 (199-255)||(9477947-9478003)
chr2 (204-284)||(29316765-29316845)
chr2 (205-285)||(33525956-33526036)
chr2 (203-270)||(4026816-4026883)
chr2 (218-285)||(25790140-25790207)
chr2 (199-278)||(33942145-33942224)
chr2 (199-285)||(1742021-1742107)
chr2 (199-285)||(10563547-10563633)
chr2 (204-270)||(10884525-10884591)
chr2 (199-285)||(14666543-14666629)
chr2 (204-286)||(32821809-32821891)
chr2 (199-285)||(43141866-43141952)
chr2 (210-283)||(1939323-1939396)
chr2 (205-258)||(13630297-13630350)
chr2 (199-284)||(18179230-18179315)
chr2 (169-265)||(33192164-33192263)
chr2 (200-269)||(40682400-40682468)
chr2 (237-269)||(7928304-7928336)
chr2 (237-285)||(11063521-11063569)
chr2 (204-264)||(13736303-13736363)
chr2 (251-315)||(19977994-19978058)
chr2 (213-308)||(30552609-30552705)
chr2 (204-256)||(33319830-33319882)
chr2 (237-285)||(41809234-41809282)
chr2 (237-269)||(43511118-43511150)
[»] chr7 (28 HSPs)
chr7 (204-278)||(6552288-6552362)
chr7 (202-272)||(24363603-24363673)
chr7 (199-272)||(38010709-38010782)
chr7 (210-266)||(27378836-27378892)
chr7 (243-303)||(36598327-36598387)
chr7 (200-259)||(7521268-7521327)
chr7 (199-277)||(44151477-44151555)
chr7 (199-264)||(44821954-44822019)
chr7 (204-284)||(9038112-9038191)
chr7 (199-271)||(39907798-39907870)
chr7 (199-284)||(46082029-46082116)
chr7 (210-277)||(7244686-7244753)
chr7 (206-277)||(9423591-9423662)
chr7 (237-284)||(11048060-11048107)
chr7 (206-305)||(34754779-34754877)
chr7 (237-284)||(43219634-43219681)
chr7 (200-251)||(47427326-47427377)
chr7 (208-278)||(529379-529449)
chr7 (240-274)||(35007633-35007667)
chr7 (204-277)||(25130086-25130159)
chr7 (199-284)||(44615094-44615179)
chr7 (204-256)||(514767-514819)
chr7 (239-307)||(5276266-5276334)
chr7 (199-271)||(15075088-15075160)
chr7 (202-258)||(18962588-18962644)
chr7 (202-258)||(18965726-18965782)
chr7 (199-267)||(40688993-40689061)
chr7 (237-305)||(48157089-48157157)
[»] scaffold0608 (1 HSPs)
scaffold0608 (240-284)||(9627-9671)
[»] scaffold0003 (1 HSPs)
scaffold0003 (211-285)||(306333-306407)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 37240603 - 37240805
Alignment:
Q  1 tatatcccttgatccggggcttttcaaaacttggaaagtaactcaatctttacatattcatttgtttttctaagactggccatgtttgtataaatagctt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37240603 tatatcccttgatccggggcttttcaaaacttggaaagtaactcaatctttacatattcatttgtttttctaagactggccatgtttgtataaataactt 37240702  T
Q  101 aattgggcgtttatagcataagtatgaatcatatatgtgtttatgtttaacttattactacaaaaaataaataaagtcaagatattttcatataagttta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37240703 aattgggcgtttatagcataagtatgaatcatatatgtgtttatgtttaactt-ttactacaaaaaataaataaagtcaagatattttcatataagttta 37240801  T
Q  201 agtt 204  Q
    ||||    
T  37240802 agtt 37240805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 190 - 320
Target Start/End: Original strand, 37240828 - 37240958
Alignment:
Q  190 atataagtttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttga 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  37240828 atataagtttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgataacatcttatgaacatgtaataagatattttttga 37240927  T
Q  290 agctttctcaaacagtttcgcaagtgttcat 320  Q
    |||||| ||||| | ||| ||||||||||||    
T  37240928 agctttttcaaaaaattttgcaagtgttcat 37240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 30257685 - 30257756
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||| ||||||||||||||||||| ||||| ||||  |||||||||||||||| ||||||||||||| ||||    
T  30257685 taagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 6292492 - 6292573
Alignment:
Q  203 ttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||| ||||| ||||||||  | ||| | |||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  6292492 ttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt 6292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 25479581 - 25479654
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||| ||||||||||| ||||||| ||| | |||||||||||||||||||||| || |||||||||| ||||    
T  25479581 tataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 10199477 - 10199404
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||| ||||||||| ||||  | ||| | |||||||||||||||||||||| ||||||||||||| |||||    
T  10199477 ataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 27140478 - 27140559
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||| |||| ||||| | ||| | ||||| |||||||||||||||| |||||| |||||| ||||| ||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttc 27140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 31517815 - 31517742
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| |||||||||| ||||||| || || | ||| | |||||||||||||||||||||| |||||||||||||    
T  31517815 taagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgt 31517742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 45975693 - 45975753
Alignment:
Q  207 aagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    ||||||||||||||| ||||| | |||  ||||||||||||||||||||||| ||||||||    
T  45975693 aagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 4700141 - 4700082
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| ||||| ||||||| |||||||||||| ||| | ||||||||||||||||||||||    
T  4700141 taagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaaca 4700082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 14630041 - 14629970
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| |||||||| ||||||||| ||||| | |||  |||||| |||||||||||||||| |||||||||||    
T  14630041 taagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacat 14629970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 24460470 - 24460403
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||| ||||||||||| | |||  ||||||||||| ||||| ||||||||||||| |||||    
T  24460470 tgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 30815690 - 30815643
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  30815690 ttatgaaaataagctgaaaacattttatgaacatgtcataagctgttt 30815643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 34290231 - 34290310
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||||||||||||||| ||||| |  ||   |||||||||||||||||||||| |||||||| |||| |||||    
T  34290231 taagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 7137068 - 7136994
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||| ||||| | |||   |||||||||||||||||||| | |||||||| |||| |||||    
T  7137068 tataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataag 7136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 51695570 - 51695500
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||| || ||||||||||| ||||| | |||  ||||||||||||||||||||| | ||||||||||    
T  51695570 taagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 51695500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 7472311 - 7472380
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca-tcttatgaacatgt 272  Q
    |||||||||||| ||||| ||||| | ||| | |||||||||||||||||||||| | ||||||||||||    
T  7472311 tataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttttatgaacatgt 7472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 35925697 - 35925770
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| ||||| ||||| | ||| ||||||| ||||||| |||||||| ||||||||||||| ||||| |||||    
T  35925697 tgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 37593721 - 37593680
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  37593721 ttatgaaaataagctgaaaacagcttatgaacatgtcataag 37593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 4481966 - 4482010
Alignment:
Q  240 tgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||    
T  4481966 tgaaaataagctaaaaacagcttatgaacatgtaataagttgttt 4482010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 4622088 - 4622172
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtt 283  Q
    |||| |||||||||||| ||||  ||||| | ||| | || |||||||||||| |||||| |||||| |||||| ||||||||||    
T  4622088 taagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgtt 4622172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 9656645 - 9656713
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||| |||||||||| ||||||| ||||||| || |  ||||||||||||||| |||||| ||||||||    
T  9656645 taagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatgaa 9656713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 15558213 - 15558285
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||||||||||||||  |||||| |||   ||||  |||||||||||||||| ||||||| |||||    
T  15558213 aagttataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatgagcatgt 15558285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 28689489 - 28689441
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  28689489 ttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttc 28689441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 4699676 - 4699605
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||||||||  ||| | ||||  ||||||||| |||||| ||||||||||||| ||||| |||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttt 4699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 5090857 - 5090916
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| ||||||||||||||||||||||| |  |||   ||||||||||||||||||||||    
T  5090857 taagctataagctgttttcataaactatacccgagatcttatgaaaataagctgaaaaca 5090916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 7218149 - 7218070
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||| ||||||||||| ||||||| |||   ||||||||||||| |||||||| ||| ||||| ||| |||||    
T  7218149 taagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataag 7218070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 15361059 - 15361106
Alignment:
Q  223 ctatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    ||||||| ||| | |||||||||||||||||||||| |||||||||||    
T  15361059 ctatcctggagagcttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 15361708 - 15361767
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| ||||||||||||||||||  ||| |||||| ||||||| || |||||||||||||    
T  15361708 taagctataagctgttttcataagatattcttgagagtttatggaattaagctgaaaaca 15361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 31118076 - 31118123
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| |||||||||||||||| || |||||||||| |||||||||||    
T  31118076 ttatggaaataagctgaaaacaactgatgaacatgtcataagatgttt 31118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 39348037 - 39347970
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    |||||| |||||||||||||||||||  |  | ||||| |||||||||||||||| |||||| |||||    
T  39348037 tataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacatg 39347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 1510003 - 1509961
Alignment:
Q  236 tttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||||||||| || |||||||||| |||||    
T  1510003 tttatgaaaataagctgaaaacagctaatgaacatgtcataag 1509961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 2522629 - 2522683
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    ||||||||||||||||||||||| || |||  |||||| ||||||| ||||||||    
T  2522629 tataagctgttttcataaactattctggagaatttatggaaataagttgaaaaca 2522683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 5887068 - 5886990
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||  |||| | ||| | |||   ||| |||||||||||||||||| ||||||||||||| |||||    
T  5887068 aagttataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataag 5886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 12641718 - 12641792
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||| |||| ||||||| ||| | ||||||||||||| |||||||| |||| |||||| | | |||||||||    
T  12641718 ctgtttttataatctatcctagagtgcttatgaaaataagatgaaaacaacttacgaacatatcacaagatgttt 12641792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 15437970 - 15438044
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||  ||||||| ||| ||||| | |||||||||||||  | ||||||||||||| ||||| ||||||    
T  15437970 tgttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttc 15438044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 27820412 - 27820342
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||| |||| |||||||| |||| ||||| | |||  ||||||||||||||||||||| | ||||||||||    
T  27820412 taagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaaca 27820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 35351039 - 35351105
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||||| ||| ||||||||||||||| ||| | |||  ||||||||||||||||| ||||| |||||    
T  35351039 tataagttgtcttcataaactatcctagagagcttacaaaaataagctgaaaacaacttataaacat 35351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 6102154 - 6102219
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||| |||||   |||  |||||| ||||||||||||||||  |||||||||    
T  6102154 tataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaaca 6102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 10809378 - 10809419
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||||||||| |||| ||||||| |||||    
T  10809378 ttatgaaaataagctgaaaacatattataaacatgtcataag 10809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 10854740 - 10854813
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||| ||||||||  |  | ||| |||||||||||||||||| ||| ||||||||| ||||| |||||    
T  10854740 tgttttcatatactatcctgaacagcttaagaaaataagctgaaaacagcttgtgaacatgtcataagctgttt 10854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 25944427 - 25944484
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    |||||||||||| |||||||||| ||||||| ||    ||||||||||||||||||||    
T  25944427 taagttataagcggttttcataagctatcctggattaattatgaaaataagctgaaaa 25944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 34179947 - 34179882
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    |||| ||||| ||||||||||||||||||||  |  ||||||| ||||| |||||||||| |||||    
T  34179947 taagctataaactgttttcataaactatcctgaaaagtttatggaaatacgctgaaaacaacttat 34179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 35351281 - 35351354
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    ||||||||||| |||||  || | |||| |||||||||| |||||   ||||||| ||||||||||||||||||    
T  35351281 ttttcataaacaatcctatagagcttataaaaataagctaaaaactgtttatgaaaatgtaataagatgtttct 35351354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 37842430 - 37842345
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| |||||| ||||||||||| ||||| |  ||   |||| ||||||||||||||||  ||||||||||||| || ||||||||    
T  37842430 taagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttt 37842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 46252719 - 46252678
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||| ||||||||| ||||||||||||| |||||    
T  46252719 ttatgaaaataacctgaaaacaacttatgaacatgtcataag 46252678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 1565603 - 1565531
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||| ||| ||||  | ||| | | |||||||||||||||||||| |||||| |||||| |||||    
T  1565603 taagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataag 1565531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 10744301 - 10744381
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||||| || || | |||   |||| |||||||| |||||||| ||||||||||||  ||||| |||||    
T  10744301 tataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttt 10744381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 11639486 - 11639406
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| |||||| |||||  ||| || ||| | ||||||||||||||| |||||| |||||| |||||| ||||| |||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttt 11639406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 12564949 - 12564877
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    |||| |||||| ||||||||||| ||||| || || | ||| | |||||||||||||||| |||||| |||||    
T  12564949 taagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 308
Target Start/End: Complemental strand, 27963444 - 27963336
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctca 299  Q
    ||||| |||| ||||||||||| ||||  | ||| | ||||  ||||||||| |||||| |||||| |||||| ||||| ||||  |  |||||||||||    
T  27963444 aagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgttaatataagctttctca 27963345  T
Q  300 aacagtttc 308  Q
    |||| ||||    
T  27963344 aacaatttc 27963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 33723419 - 33723371
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||| ||||||||||||||||||| |||||||||| || || ||||||    
T  33723419 ttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttc 33723371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 38503502 - 38503470
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||||||| ||||||||||    
T  38503502 ttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 39270500 - 39270428
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    |||| |||||||||||||||||| ||| | | ||| |  |||||||||||| |||||||| |||||| |||||    
T  39270500 taagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatg 39270428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 41195257 - 41195189
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||| | |||   |||||||||||||||||||| | ||||| || |||| |||||    
T  41195257 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataag 41195189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 47877142 - 47877182
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||||||||| ||||||| ||||| ||||    
T  47877142 ttatgaaaataagctgaaaacaacttatgagcatgtcataa 47877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 51929847 - 51929783
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    |||||||||||||||||||| |||| || ||| | ||||| |||||||| |||| || |||||||    
T  51929847 gttataagctgttttcataagctattctagagagcttatggaaataagccgaaatcagcttatga 51929783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 41957526 - 41957440
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||||||| |||||||| |||||| |||||| ||||| ||||||    
T  41957526 taagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttc 41957440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 17258952 - 17258879
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||||||||||  || | |||||||||||||||||||||| ||||||||||||| |||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 7984969 - 7985034
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||| ||||||||| ||||| | |||  ||||||||||||||||||||||| ||||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 4014493 - 4014429
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    ||||||||||||||||| ||||| | |||   |||||||||||||||||||||| ||||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 10272506 - 10272419
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    |||| |||||| ||||||||||| | ||| | ||| |||||||||||||||||||||||| ||||   |||||| ||||| |||||||    
T  10272506 taagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttct 10272419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 11615501 - 11615568
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||||||||||  |||||||  | | ||||| |||||||||||||||| ||||||||||||    
T  11615501 tataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagcttatgaacatg 11615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 25461391 - 25461312
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| ||||| |||||||||||| ||||| | | |  ||||||||||||||||||||||| || |||||||||| |||||    
T  25461391 taagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataag 25461312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 7674655 - 7674729
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||| ||||| | |||  ||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||    
T  7674655 tgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgtttc 7674729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 8938641 - 8938718
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaata 276  Q
    |||||||||||| ||||||||||||| | |  ||| ||||||||||||||||| |||||| ||||   ||||||||||    
T  8938641 taagttataagcagttttcataaactttgcaggagagtttatgaaaataagctaaaaacaacttacagacatgtaata 8938718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 11707055 - 11707128
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||||| ||||| |  || | || ||||||||||||||||||| ||||| ||||||| ||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 36318769 - 36318854
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| |||| ||||||||||| ||||| | |||  |||||| |||||||||||||||| ||||  || |||||||||| |||||    
T  36318769 taagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagcttaacaagatgtaataagttgttt 36318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 36638750 - 36638815
Alignment:
Q  207 aagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||||||||||  |||||| ||| | ||||| |||||||||||||| | |||||||||||||    
T  36638750 aagctgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgt 36638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 12595747 - 12595675
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagtg 315  Q
    |||||||||||||||  |||||||||||| |||||| |||||| | ||||| ||||||| ||| || ||||||    
T  12595747 aaataagctgaaaacggcttatgaacatgcaataagctgtttccttaagctctctcaaatagtctcacaagtg 12595675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 16889735 - 16889795
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    |||||||||||||||||| |||| || ||| ||||||| |||||| ||||||||| |||||    
T  16889735 tataagctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 17368676 - 17368756
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||| ||||| | ||| | ||||| |||||||||||||||  | ||||||||||| ||||| |||||    
T  17368676 tataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttt 17368756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 32194180 - 32194075
Alignment:
Q  169 aaataaagtcaagatattttcatataagtttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaac 268  Q
    ||||||||||||||| ||||||||||    |||| |||||| ||||||  ||| ||||| ||||| | ||||  |||||||||||||||| |||||| |     
T  32194180 aaataaagtcaagatgttttcatata----taagctataagatgtttttttaagctatctttgagagcttatataaataagctgaaaacaacttatggaa 32194085  T
Q  269 atgtaataag 278  Q
    |||| |||||    
T  32194084 atgtcataag 32194075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 1019530 - 1019475
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||||||| |||||| |||||||| ||| ||||||||||| |||||||| ||||||    
T  1019530 ctgttttcgtaaactctccttgagagttaatgaaaataagatgaaaacaacttatg 1019475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 3237093 - 3237156
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||||||||||||||||| |||||||  || | ||||||||||| |||||| ||| ||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaa 3237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 10125755 - 10125708
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| |||||    
T  10125755 ttatgaaaataagctgaaaacaccttatcaacatgtcataagttgttt 10125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 18543271 - 18543193
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||| ||||||||||| ||||||| ||| | ||||| |||||||||||||||| || ||| |||||| |||||    
T  18543271 taagatataagttgttttcataagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 2092608 - 2092534
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||| ||||||| |  |||||||||||||| ||| |||||||| |||||| |||||  ||||| ||||||    
T  2092608 tgttttcattaactatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttc 2092534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 11700417 - 11700367
Alignment:
Q  235 gtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||||||||| ||||||||| |||||| |||||| ||||| ||||||    
T  11700417 gtttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttc 11700367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 12467166 - 12467212
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtt 283  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  12467166 ttatgaaaataagctgaaaacagcttataaacatgtcataagttgtt 12467212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 28413354 - 28413288
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| ||||| |||||||  |||| | ||| ||||||| |||||||||||||||| |||||||||||    
T  28413354 tatacgctgtgttcataagttatcttggagagtttatggaaataagctgaaaacagcttatgaacat 28413288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 31694551 - 31694629
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagtg 315  Q
    ||||||||||||| |||||||| |||||| ||| || ||||| |||||||  |||  ||| ||||||||||| ||||||    
T  31694551 ttatgaaaataagttgaaaacaacttatggacaagtgataagctgtttctacaagtattcacaaacagtttcacaagtg 31694629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 40205142 - 40205064
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||||||||| ||||||| ||| | ||||  ||||||||||||||||  ||||| |||||| ||||| |||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgttt 40205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 2568653 - 2568738
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| |||||| ||||||||||| ||||| | ||| | | ||||||||||||| |||| | |||||||| |||| ||||| |||||    
T  2568653 taagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttt 2568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 37611278 - 37611217
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||| ||||| | ||| | ||||| |||||| ||||||||| |||||||||||||    
T  37611278 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgt 37611217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 37788008 - 37787947
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||| ||||| | ||| | ||||| |||||| ||||||||| |||||||||||||    
T  37788008 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgt 37787947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 40731476 - 40731521
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    ||||||||||| ||||||||||| | ||||||||||| ||||||||    
T  40731476 tgttttcataagctatccttgagagcttatgaaaatatgctgaaaa 40731521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 1899186 - 1899234
Alignment:
Q  236 tttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| |||||||||||||||| |||||| |||||| ||||| |||||    
T  1899186 tttatggaaataagctgaaaacaacttatgcacatgtcataagctgttt 1899234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 7907876 - 7907944
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    ||||||||||| |||||| |||| || || | ||| | |||||||| ||||||||||||| ||||||||    
T  7907876 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 8481218 - 8481270
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    ||||||||||||||||||  |||| ||||||| ||||| ||||||||| ||||    
T  8481218 tataagctgttttcataagttatctttgagggcttatggaaataagctaaaaa 8481270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 10771958 - 10771890
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||| || |||||||| ||||||  ||| |||||||||||||||||||| ||  ||||| |||||||    
T  10771958 tataagttgctttcataagctatccgagagagtttatgaaaataagctgaacacggcttatcaacatgt 10771890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 1217875 - 1217789
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||||||||||||| |||||||||||   |||||||| |||| |||||||| |||||| |||||| ||||| ||||||    
T  1217875 taagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttc 1217789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 53736190 - 53736085
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaaca 303  Q
    |||||| ||||||||||| |||| ||  || ||||||||||||||||||||| || ||||||||||||||||| |  |||||  |||||| ||| |||||    
T  53736190 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacgcggtttccagaagctctcttaaaca 53736091  T
Q  304 gtttcg 309  Q
    ||||||    
T  53736090 gtttcg 53736085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 39602285 - 39602206
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||||||||| ||||| |||||   ||||||||||||| ||||||||  |||||||||||| |||||    
T  39602285 taagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataag 39602206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 43115051 - 43115137
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| |||||| ||||||||| ||||||| ||||| | ||||| ||||||||||||||||  ||||| |||||| ||||| ||||||    
T  43115051 taagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttc 43115137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 40665424 - 40665497
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||| |||||||||||  |||| | ||| | |||| ||||||||||||||||| |||||||||||||    
T  40665424 taagttataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgt 40665497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 20669172 - 20669240
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||||||||||||| ||||| | ||| | ||||| |||||||| ||||||| |||||||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgt 20669240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 28622074 - 28622006
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||| |||||||||||||||||||||||| | |||   |||||||||||| ||||||||| ||||||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 31010405 - 31010501
Alignment:
Q  207 aagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaaca 303  Q
    ||||||||||| ||| ||||| | ||| | ||||| || ||||||||||||| |||||| |||||| ||||| |||||||  |||||||| ||||||    
T  31010405 aagctgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagctttcacaaaca 31010501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 34414845 - 34414793
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 34414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 24785212 - 24785279
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||| ||||||| ||| | ||||| ||||||||| |||||| ||||||||||||| |||||    
T  24785212 tgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 272
Target Start/End: Original strand, 36887537 - 36887572
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||||||||||||||||||||||||||||    
T  36887537 ttatgaaaataagctgaaaacatcttatgaacatgt 36887572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 41724206 - 41724293
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatg-aaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| ||||| |||||||||| | ||||||||||| | ||||  ||||||||||||||||| |||||| |||||| ||||| ||||||    
T  41724206 taagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttc 41724293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 30923961 - 30923887
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||| ||||||| ||| ||||||  |||||||||||||||| |||||  |||||| ||||| ||||||    
T  30923961 tgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttc 30923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 3015918 - 3015833
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||||||||||||| || |||  | |||| | |||| |||||||| ||||||||||||||| |||||| ||||| |||||    
T  3015918 taaggtataagctgttttcaaaagctaatcatgagagcttattaaaataagatgaaaacatcttatggacatgtcataagttgttt 3015833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 3044329 - 3044248
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||| |||||||| ||  ||| ||| ||| | ||||||||||||| |||||||| ||||||||||||| ||||| ||||||    
T  3044329 tataacctgttttcttatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 5396230 - 5396278
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||||    
T  5396230 ttatgaaaataagctgaaaacaccttattaacatgtcataagctgtttc 5396278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 36646457 - 36646385
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||  ||||||||||| ||||||| ||| ||||||  ||||||| |||||||| |||||| |||||    
T  36646457 taagttataacttgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatg 36646385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 53952042 - 53952116
Alignment:
Q  201 agttataagctgttttcataaactatcctt---gagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||| ||||||||||||||||  |    ||| |||||||||||||||||||||||| || ||||||||||    
T  53952042 agttataagttgttttcataaactataataaccgagagtttatgaaaataagctgaaaacagctcatgaacatgt 53952116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 482852 - 482781
Alignment:
Q  214 tttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||||||||| |  || ||||||| |||||||||||||| ||| ||||| ||||| ||||| ||||||    
T  482852 tttcataaactatcttgaagagtttatggaaataagctgaaaatatcatatgagcatgttataagttgtttc 482781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 1816578 - 1816657
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||| ||||||||||| |||| || ||| | |||| ||||||||||||||||| | |||||| |||| |||||    
T  1816578 taagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataag 1816657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 2128294 - 2128255
Alignment:
Q  238 tatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  2128294 tatgaaaataagctgaaaacagcttatgaacatgttataa 2128255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 5391912 - 5391959
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttt 5391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 33883787 - 33883752
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||||||||||||||||| |||||||||||||    
T  33883787 ttatgaaaataagctgaaaacaacttatgaacatgt 33883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 36101601 - 36101648
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  36101601 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttt 36101648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 36139911 - 36139958
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  36139911 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttt 36139958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 39723277 - 39723230
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||    
T  39723277 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 39723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 2152238 - 2152168
Alignment:
Q  214 tttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||||||| | ||||  ||| ||| |||||||| |||| |||||||| ||||| |||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttt 2152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Complemental strand, 9279389 - 9279315
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||||||| |  || ||||| | |||||||||||||||| |||||  |||||| ||||| ||||||    
T  9279389 tgttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttatatacatgttataagctgtttc 9279315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 13709898 - 13709832
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||| ||||| |||||||||||| ||||||| ||| ||||||  |||||| ||||||||| ||||||    
T  13709898 taaggtataatctgttttcataagctatcctggagagtttattgaaataaactgaaaacaacttatg 13709832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 20502138 - 20502084
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||||||||||||||||| |||||||  || | |||||| |||||||||||||||    
T  20502138 tataagctgttttcataagctatcctgaagagcttatgagaataagctgaaaaca 20502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 25453929 - 25453863
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    ||||| || ||||||||||||||||| ||  | |||||||||||||||||||| | ||| |||||||    
T  25453929 tataacctattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacat 25453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 42545679 - 42545713
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||| ||||||||||||||||||    
T  42545679 aaataagctgaaaacagcttatgaacatgtaataa 42545713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 52618998 - 52619076
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||||||| || ||||| |  || | || |||||||||| |||||| | ||||||||||||| ||||    
T  52618998 taagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataa 52619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 2719460 - 2719529
Alignment:
Q  196 gtttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    ||||||| ||||| |||||||||||| ||||| | |||   ||||||||||||||||| |||| ||||||    
T  2719460 gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 21367667 - 21367732
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||| ||||||||||| ||||| | |||   |||||||||||||||||||||| ||| ||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaaca 21367732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 25925775 - 25925816
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||| |||||||| ||||||||||||| |||||    
T  25925775 ttatgaaaataagttgaaaacagcttatgaacatgtcataag 25925816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 38318991 - 38319040
Alignment:
Q  235 gtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||| |||||||||||||| | ||||||||||||| ||||| |||||    
T  38318991 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 38319040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 40321106 - 40321069
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaa 274  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  40321106 ttatgaaaataagctgaaaacaacttatgcacatgtaa 40321069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 237392 - 237464
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||| |||||||||||  ||||||  || | ||| | |||||||||||||||| |||||| |||||    
T  237392 taagttataagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacatg 237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 22214729 - 22214661
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||| ||||||||||| ||||||| |||   ||| | |||||||||||||||| |||||| ||||||    
T  22214729 tataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgt 22214661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 30573977 - 30573917
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||| ||||| | ||| | | ||||| |||||||||||||| ||||||||||||    
T  30573977 tgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatg 30573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 37273135 - 37273215
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| |||||||||||| ||||| | |||   ||||| ||||||| |||||||| |||||| |||||| ||||| ||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttc 37273215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 41155181 - 41155221
Alignment:
Q  218 ataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| ||||||||||| ||||||||||||||| ||||||||    
T  41155181 ataagctatccttgagagtttatgaaaataagttgaaaaca 41155221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 41644515 - 41644447
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||||||||||||| ||||| | |||   ||| | |||||||||||||||| |||||||| ||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgt 41644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 45432976 - 45432936
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  45432976 ttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 12851183 - 12851256
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||| || |||||||| | |||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  12851183 tgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttt 12851256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 11569527 - 11569416
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaaca 303  Q
    |||||||||||||||||| ||||| | ||| | || ||||||||||||||||||| |||||| |||||| ||||| ||||||   ||||| ||| |||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaaca 11569428  T
Q  304 gtttcgcaagtg 315  Q
    || || ||||||    
T  11569427 gtctcacaagtg 11569416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 31705080 - 31705151
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| |||||||||||||||||| || |||||||| ||||||| |||||||||||||||| |||||| ||||    
T  31705080 taagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacat 31705151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 5069696 - 5069798
Alignment:
Q  203 ttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaac 302  Q
    |||||||||||||||||||  |||| | ||  | ||||||||||||||||||||   ||||||||||||| ||||||||||||   ||||| ||||||||    
T  5069696 ttataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacatgttataagatgtttccataagctctctcaaac 5069795  T
Q  303 agt 305  Q
    |||    
T  5069796 agt 5069798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 11415149 - 11415235
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||| ||||||||||||| ||||||| ||| |||| |||||||||||||| || | |||||| |||||| ||||| ||||||    
T  11415149 taagttatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttc 11415235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 30277315 - 30277254
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||| ||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 20672756 - 20672824
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||| |||| ||||||| ||| | |||||||||||||||||||||| ||||||||||||| |||||    
T  20672756 ctgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 8062324 - 8062390
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||| |||||||||||||||||| ||||| | ||| | ||||| |||||||||||||||||||||||    
T  8062324 taagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 30389094 - 30389167
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| |||| ||||||||||||| || |||| |||   |||||||||||||||||||||| |||||||||||||    
T  30389094 taagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgt 30389167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 779131 - 779051
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| |||||||||||||||||| | ||| || ||  |||||||| |||||||| ||||||||||||| ||||| |||||    
T  779131 tataaactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttt 779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 27028831 - 27028894
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||||||||||||||||| ||||| | ||| | |||||||||||||||||||| | ||||||||    
T  27028831 tataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 28769414 - 28769343
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| |||||||||||||||||| ||||  | ||| ||||||| |||||||||||||||| |||||| ||||    
T  28769414 taagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacat 28769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 8060647 - 8060733
Alignment:
Q  183 tattttcatataagtt-taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaac 268  Q
    |||||| ||| ||||| ||| ||||||||||||||||||| | ||||| ||| | ||||| |||||||||||||| | |||||||||    
T  8060647 tatttttatacaagttataacttataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaac 8060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 9956889 - 9956819
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    ||||||||||| ||||||||||| ||||| | |||   |||||||||||||||||||||  ||||||||||    
T  9956889 taagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 29973076 - 29973134
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaac 257  Q
    |||| |||||| ||||||||||| ||||||||||| ||||||| |||||| ||||||||    
T  29973076 taagctataagttgttttcataagctatccttgagagtttatggaaataaactgaaaac 29973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 31862488 - 31862554
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||| |||||| |||||||||||  |||||| ||| | |||||||||||||||||||||| ||||||    
T  31862488 taagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 37353319 - 37353245
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||| ||| ||||| ||||| | |||||||||||| |||||||||  ||||||| |||| |||||    
T  37353319 tataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataag 37353245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 10075626 - 10075553
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||||| ||||||||| ||||||| ||| | ||||||||||||||| ||| || ||| | |||||||    
T  10075626 taagttataagctattttcataagctatcctagagagcttatgaaaataagctaaaagcagcttgtcaacatgt 10075553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 9541057 - 9540985
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||| ||||||| ||| | || ||||||||||||||| |||  ||||| |||||| ||||||||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttc 9540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 34290867 - 34290943
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||| ||||||  ||| ||||||| ||| ||| ||||||||||||||||||   |||||| ||||||||||||    
T  34290867 gttataagttgtttttctaatctatcctggagagttaatgaaaataagctgaaaaaggcttatggacatgtaataag 34290943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 42215376 - 42215296
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| || ||||||||  ||||||| ||| | ||||| |||||||||||||||| |||||||||| || ||||| |||||    
T  42215376 tataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttt 42215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 2595034 - 2594987
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||    
T  2595034 ttatgagaataagctgaaaacaacttatgaacatgtcataagttgttt 2594987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 11795087 - 11795166
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||| |||||||| ||||  | ||| | ||||| ||||||||||||||||  ||||| |||||| |||||    
T  11795087 taagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 36338337 - 36338278
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| ||||||||||||| ||||| |||| |||||   ||||||||||||||||||||||    
T  36338337 taagatataagctgtttttataaaatatctttgagaacttatgaaaataagctgaaaaca 36338278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 42215143 - 42215084
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||| ||||| | ||| | ||||| |||||||||||||||| |||||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 4281578 - 4281628
Alignment:
Q  236 tttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    |||||||||||||| |||||||| ||||||||||||| ||| | |||||||    
T  4281578 tttatgaaaataagatgaaaacaacttatgaacatgtcatatgttgtttct 4281628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 11185260 - 11185302
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||    
T  11185260 aaataagttgaaaacaacttatgaacatgttataagatgtttc 11185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 30988067 - 30987961
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctg-aaaacatcttatgaacatgtaataagatgtttcttgaagctttct 297  Q
    ||||||||||||||||||  ||| ||||| ||||||| ||||| || ||| ||| |||| | |||||| |||||| ||||| ||||||   ||||| |||    
T  30988067 taagttataagctgtttttgtaagctatctttgagggcttatggaactaaactgaaaaatagcttatggacatgtcataagttgtttccataagctctct 30987968  T
Q  298 caaacag 304  Q
    |||||||    
T  30987967 caaacag 30987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 3161660 - 3161619
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||||||||||||||| |||||||||||| |||||    
T  3161660 ttataaaaataagctgaaaacattttatgaacatgtcataag 3161619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 3254264 - 3254305
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||| ||||||||||||| ||||| |||||    
T  3254264 aaataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 6509378 - 6509273
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctc 298  Q
    |||| |||||||||||||||||| ||||||| ||| | ||||  ||||||| |||||| |  ||||   ||||| ||||| |||||||  ||||| ||||    
T  6509378 taagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctctctc 6509279  T
Q  299 aaacag 304  Q
    ||||||    
T  6509278 aaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 13459640 - 13459725
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| |||||| ||||||||||||  |||||  || | ||||||||||| ||||||||||  ||||||| |||| ||||| |||||    
T  13459640 taagctataagttgttttcataaatcatcctacagagcttatgaaaataggctgaaaacagtttatgaaaatgtcataagctgttt 13459725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 14905613 - 14905686
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||||||| | ||||| | |||  |||||||||| |||||| ||||||||||| ||||||| |||||    
T  14905613 ataaactgttttcattagctatcttggagaatttatgaaaacaagctgtaaacatcttataaacatgtcataag 14905686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 25869327 - 25869262
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||  ||||| | ||| ||||||| |||||||||||||||| |||||| |||||| |||||    
T  25869327 ttttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataag 25869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 30191211 - 30191130
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||| |||| |||| |||||||  |  ||||||| ||||||||||||||||  || ||||||||| ||||| ||||||    
T  30191211 tataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttc 30191130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 31875665 - 31875564
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaaca 303  Q
    ||||||||||||   ||||||||| |  || | ||||||||||||| ||||||   |||||| |||||| ||||| ||||||   |||||||||||||||    
T  31875665 tataagctgtttctttaaactatcttcaagagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaaca 31875566  T
Q  304 gt 305  Q
    ||    
T  31875565 gt 31875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 33714306 - 33714241
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||| ||||||||| |||||   ||| | |||| ||||||||||||||||| ||||||||||    
T  33714306 tataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 1433541 - 1433609
Alignment:
Q  197 tttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||||| | ||||| |||||||||| ||||||| ||| | ||||||||||||| |||||| ||| ||||    
T  1433541 tttaagctttaagcagttttcataagctatcctggagagcttatgaaaataagttgaaaatatcctatg 1433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 2458629 - 2458569
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||| ||||| ||||||| ||| | ||||| |||||| ||||||||| ||||||||||||    
T  2458629 tgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatg 2458569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 2492958 - 2493010
Alignment:
Q  226 tccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| ||||||||||| ||||||||  |||||| ||||||||||||| |||||    
T  2492958 tcctggagggtttatggaaataagcaaaaaacaacttatgaacatgttataag 2493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 8062519 - 8062587
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||| |||||| |||| |||||| ||||| | ||| |||||||||||||||||| ||| | ||||||||    
T  8062519 taagctataagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagcttatgaa 8062587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 11183545 - 11183605
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    ||||||||||||||| || ||| ||| ||| | ||||| |||||||||||||||| |||||    
T  11183545 tataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttat 11183605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 11745722 - 11745662
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    ||||||||||||| |||| ||||||| | | | |||||||| ||||||||||||| |||||    
T  11745722 tataagctgtttttataagctatcctagtgagcttatgaaactaagctgaaaacaacttat 11745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 21130608 - 21130668
Alignment:
Q  198 ttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    ||||| |||||| |||| |||||||||||| ||||| | ||||| ||||||||| ||||||    
T  21130608 ttaagatataagttgttctcataaactatcattgagagcttatggaaataagctcaaaaca 21130668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 31804529 - 31804457
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    |||||||||||| |||||||| | ||||| ||||| | ||||||||  |||||||||||| || || ||||||    
T  31804529 taagttataagcagttttcatgagctatctttgagagcttatgaaaggaagctgaaaacaactcataaacatg 31804457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 41606953 - 41606893
Alignment:
Q  224 tatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||| | ||||| |||||||||||||||| ||| ||||||||| ||||| |||||    
T  41606953 tatcctagagagcttatggaaataagctgaaaacaacttttgaacatgtcataagctgttt 41606893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 7694085 - 7694012
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| ||||||||||||||||||  |||||| ||| ||||||| |||||||||||||||| |||||||||||||    
T  7694085 taagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgt 7694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 1137712 - 1137792
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||| |||||||||||||||  ||| | ||||| |||||| ||||||||| ||||||||||||| |||||||||||    
T  1137712 tataagctgctttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttt 1137792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 52746909 - 52746829
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||||||| ||||| |  | || |||||||||| ||||||||||| |||||||||||||  |||| ||||||    
T  52746909 ataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaagctgtttc 52746829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 2996568 - 2996674
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctc 298  Q
    ||||||||||| ||||||||||| ||||| | ||| |  |||||||||||| |||||| | |||||| |||||| ||||| |||||    ||||| ||||    
T  2996568 taagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctc 2996667  T
Q  299 aaacagt 305  Q
    |||||||    
T  2996668 aaacagt 2996674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 29467681 - 29467603
Alignment:
Q  217 cataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagcttt 295  Q
    |||| |||||||| ||| ||||||| |||||||||||||||| |||||| |||||| |||||  ||||||  |||||||    
T  29467681 catacactatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataagccgtttctataagcttt 29467603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 44249295 - 44249365
Alignment:
Q  214 tttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||| | ||| |||||||||||||||||||| | | ||||| ||||||| ||||| |||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataagctgttt 44249365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 24929493 - 24929574
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||| |||||||||||||| | || ||| | ||||| ||||||||||||||||  |||||||||||  ||||| ||||||    
T  24929493 tataagttgttttcataaactctactagagagcttatggaaataagctgaaaacaatttatgaacatgccataagctgtttc 24929574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 51630106 - 51630175
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaac 268  Q
    |||| |||||||| ||||||||| ||||| |  ||  |||||||||||||||||||||||||||| ||||    
T  51630106 taagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaacatcttacgaac 51630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 56480343 - 56480392
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataa 248  Q
    ||||||||||||||||||||||||||||| | ||| | ||||||||||||    
T  56480343 taagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 29263371 - 29263451
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||| ||||||||||| |||||||  || | || || |||||||||||||||| ||||||||||| | ||||| ||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataagctgtttc 29263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 43824278 - 43824350
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||||| ||||| |||  |||||| ||  | ||||| |||||||||||||||| ||||||||||||    
T  43824278 taagttataagcttttttcgtaagttatcctggaaagcttatggaaataagctgaaaacaacttatgaacatg 43824350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 17884063 - 17884134
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||||||| || ||||||||||| ||||  | ||| | |||||||||| ||||||||||| |||||||||||    
T  17884063 taagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 42866063 - 42866134
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| |||||| ||||||||||| ||||||||||| | ||||| || |||||| ||| ||||||||| ||||    
T  42866063 taagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacat 42866134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 55084549 - 55084482
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgta 273  Q
    |||| ||||||||| | ||||| | ||| | ||||||||||||||||||| || ||||||||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgta 55084482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 6979032 - 6978958
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||| |||||| |||| | |||||  || |||||||||||||||||||||||| |||||  |||||| |||||    
T  6979032 tataagttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataag 6978958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 272
Target Start/End: Original strand, 24747353 - 24747387
Alignment:
Q  238 tatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||||||||||||| |||||||||||||    
T  24747353 tatgaaaataagctgaaaacaacttatgaacatgt 24747387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 27721717 - 27721791
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||||  |||||| ||| | ||  |||||||||||||||||| |||||| | |||| |||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatggatatgtcataag 27721791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 47800623 - 47800689
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||||||||||||||||| ||||| |  || | |||||||||||||||||||||  ||||| |||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttataaacat 47800689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 48719430 - 48719388
Alignment:
Q  235 gtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  48719430 gtttatgaaaataagctgaaaacagcttacgaacatgtcataa 48719388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 49219134 - 49219200
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    |||| |||||| ||||||||||||||||| |  || | ||||| |||||||||||||||| ||||||    
T  49219134 taagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 53673728 - 53673662
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    ||||| |||||||||||| ||||| | ||| | ||||| |||||||||||||||| |||||| ||||    
T  53673728 tataaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacat 53673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 53792585 - 53792631
Alignment:
Q  218 ataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    |||||||||| | ||| |||||||||||||||||||||||| |||||    
T  53792585 ataaactatcttggagagtttatgaaaataagctgaaaacaacttat 53792631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 1312872 - 1312921
Alignment:
Q  235 gtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||| ||||||||||||||||  ||||||| |||||||||| |||||    
T  1312872 gtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttt 1312921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 1706622 - 1706687
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||||||||| | ||  | ||||||||||||| || ||| | ||||||||||    
T  1706622 tataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatgaaca 1706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 20936063 - 20935994
Alignment:
Q  235 gtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacag 304  Q
    |||||||| ||||||||||||||| ||||  ||||||| | ||| | |||||  ||||||||||||||||    
T  20936063 gtttatgagaataagctgaaaacaacttacaaacatgttacaagttatttctataagctttctcaaacag 20935994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 20936292 - 20936219
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||  ||||||| ||| | ||||| ||||||| |||||||| ||||||||||| | ||||| |||||    
T  20936292 tgttttcatattctatcctggagagattatggaaataaggtgaaaacagcttatgaacatatcataagttgttt 20936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 22236161 - 22236064
Alignment:
Q  218 ataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagtg 315  Q
    |||||||| ||| ||| | |||||||||||||| ||||||| || |||||||||| | ||| |||||    | ||| || ||||||||||||||||||    
T  22236161 ataaactagcctggagagcttatgaaaataagcagaaaacagctcatgaacatgtcacaagctgttttaataggctctcccaaacagtttcgcaagtg 22236064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 35064855 - 35064924
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgta 273  Q
    |||| |||||||||||||  |||| | ||| ||||||| ||||||||||||||||  |||| ||||||||    
T  35064855 tatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaacaatttataaacatgta 35064924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 35958658 - 35958734
Alignment:
Q  207 aagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||||||| ||||||| ||| |||||| | |||||||| |||| ||||||| ||||||  ||||| |||||    
T  35958658 aagctgttttcataagctatcctggagagtttat-acaataagctaaaaatatcttatcaacatgatataagctgttt 35958734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 10192279 - 10192350
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||| |||||||| || ||||||| ||| | | ||||||||||| |||||||| |||| |||||||    
T  10192279 taagttataagttgttttcaaaagctatcctggagagct-atgaaaataagttgaaaacaacttacgaacatg 10192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 11264299 - 11264375
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||| ||||||||||| | ||||| ||| | ||||| ||||||| ||||||||  ||||| |||||| |||||    
T  11264299 gttataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataag 11264375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 16200051 - 16199999
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    |||||||||||||||||| ||||| | ||||  ||||||||||||||| ||||    
T  16200051 tataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 37864386 - 37864342
Alignment:
Q  240 tgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||| |||||||| ||||||||||| ||||||| |||||    
T  37864386 tgaaaataaggtgaaaacagcttatgaacatttaataagctgttt 37864342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 45732693 - 45732741
Alignment:
Q  224 tatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||| ||| | ||||| |||||||||||||||||| |||||||||||    
T  45732693 tatcctcgagagcttatggaaataagctgaaaacatcatatgaacatgt 45732741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 45738099 - 45738139
Alignment:
Q  226 tccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    |||||||| | ||||| ||||||||||||||||||||||||    
T  45738099 tccttgagagcttatggaaataagctgaaaacatcttatga 45738139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 46415866 - 46415794
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||||| | ||||||||| ||||||| ||| | |||  ||||| ||||||||||| |||||| ||||||    
T  46415866 aagttataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgt 46415794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 6647385 - 6647461
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||| |||||||||||| ||||| | ||| | ||||||||||||| |||||||||||||||||||||| |||||    
T  6647385 gttataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 4247136 - 4247058
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||||||||||||||  | |||| || || ||||||||| ||||||||||||  |||||||||||| ||||    
T  4247136 taagttataagctgttttcataagttgtcctagaaggcttatgaaaacaagctgaaaacagattatgaacatgtcataa 4247058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 31624084 - 31624170
Alignment:
Q  198 ttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| |||||||||||||||||  ||||| | |||   ||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  31624084 ttaagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttt 31624170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 4006709 - 4006780
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||| |||||| ||||||||||| |||||| |||| | |||||||||||||||||||| | |||||| ||||    
T  4006709 taagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacat 4006780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 31671149 - 31671090
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||| |||||||||||||| ||||||||||| ||  | ||||||||||||||||||||||    
T  31671149 taagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaaca 31671090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 33911353 - 33911298
Alignment:
Q  203 ttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||||||||||||||||||||||||||  |  |||| |||||||||||||||||||    
T  33911353 ttataagctgttttcataaactatcctgaaaagtttgtgaaaataagctgaaaaca 33911298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 326
Target Start/End: Original strand, 34939755 - 34939866
Alignment:
Q  215 ttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagt 314  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||||  ||||| |||||| ||||| ||||||   ||||| ||  |||||||||| ||| |    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaaat 34939854  T
Q  315 gttcatctcact 326  Q
    ||| || |||||    
T  34939855 gtttatgtcact 34939866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 2112200 - 2112282
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    |||||| ||||||||||||||||| | ||| | ||||  |||||| | ||||||| ||||||||||||| ||||| |||||||    
T  2112200 tataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgtttct 2112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 769134 - 769218
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||| |||||||||||| ||| | ||||||  ||| |||| |||| |||||||| ||||||||||||| |||||||||||    
T  769134 taagctataaactgttttcataagctaac-ttgaggacttaagaaagtaagttgaaaacagcttatgaacatgtcataagatgttt 769218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 22743520 - 22743561
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  22743520 aaataagctgaaaacagcttatgaacatgtaataagttgttt 22743561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 24782054 - 24782123
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaac 268  Q
    |||||||||||||  ||| |||||||||||||||| | |||||||||||| || |||| | |||||||||    
T  24782054 taagttataagctactttaataaactatccttgagagcttatgaaaataaactaaaaatagcttatgaac 24782123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 284
Target Start/End: Complemental strand, 28641828 - 28641739
Alignment:
Q  195 agtttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||| ||||| |||||||||  | |||| ||  || | ||||||||||||||| |||||| ||||||||||||| ||||| |||||    
T  28641828 agtttaagctataaactgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgttataagctgttt 28641739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 281923 - 281844
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||||||| ||||||| ||||||| ||| | | ||| |||||||||||||||| |||||  |||||| |||||    
T  281923 taagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataag 281844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 696635 - 696682
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||    
T  696635 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 696682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 821833 - 821872
Alignment:
Q  238 tatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  821833 tatgaaaataagctgaaaacagcttatgaacatgtcataa 821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 6963116 - 6963037
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagtgt 316  Q
    |||||||| |||| |||||||| |||||| |||||||||||| ||| |||  |||||   |||||||||||| |||||||    
T  6963116 ttatgaaattaagatgaaaacagcttatggacatgtaataagttgtgtctataagctggatcaaacagtttcacaagtgt 6963037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 35070541 - 35070475
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    |||||||||||||||||  ||| ||||  ||||| | ||||||||||||| |||||||| |||||||    
T  35070541 aagttataagctgtttttgtaagctatgtttgagagcttatgaaaataagttgaaaacagcttatga 35070475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 1497978 - 1498035
Alignment:
Q  201 agttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||||||||  |||||||||||||||| | ||| | ||||||||||||| ||||||||    
T  1497978 agttataagaagttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 4420676 - 4420725
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    ||||| |||||||||||||||| ||||||||||||| ||||  |||||||    
T  4420676 ttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttct 4420725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 6536980 - 6537021
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||| |||||||||||||||| ||||||||||||| |||||    
T  6536980 ttatggaaataagctgaaaacaacttatgaacatgtcataag 6537021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 7446400 - 7446327
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||||||||||||| |||||   | ||| |||||||||||| ||||||||| ||||| ||| ||| |||||    
T  7446400 ataagctgttttcataagctatctcagggggcttatgaaaataacctgaaaacaacttataaacgtgtgataag 7446327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 8010350 - 8010439
Alignment:
Q  197 tttaagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    |||||||||||||||||||| ||||  |||||| |||   ||||  |||||| ||||||| | ||||||||||||| || || |||||||    
T  8010350 tttaagttataagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagttgtttct 8010439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 9027611 - 9027652
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||||||| |||||| |||||| |||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataag 9027652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 10616756 - 10616703
Alignment:
Q  231 gagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||| ||||||| ||||||||| ||||||||||||| ||||| |||||    
T  10616756 gaggatttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttt 10616703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 13908496 - 13908537
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||||||||||| |||| |||||||| |||||    
T  13908496 ttatgaaaataagctgaaaacagcttacgaacatgtcataag 13908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 21024212 - 21024285
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||||| |||||||| |||||||| |||   ||||||||||||| |||||||| | |||||| |||| |||||    
T  21024212 ataagctattttcatatactatcctcgagaacttatgaaaataagttgaaaacaacatatgaatatgtcataag 21024285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 32386176 - 32386095
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||||||||||||| |  |||||| ||  | |||||||| ||||||||||||| |||||| ||||||  |||| ||||||    
T  32386176 tataagctgttttcattagttatcctggaaagcttatgaaagtaagctgaaaacaacttatggacatgttgtaagctgtttc 32386095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 3528811 - 3528883
Alignment:
Q  212 gttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||| ||||||| | ||| | ||||||||||||| ||||||||  ||||| |||||| ||||| |||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 9323564 - 9323492
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||| ||||| |||||||  |  ||||||| ||||||| ||||||||||| ||  ||||||||||||    
T  9323564 taagctgtttccataagctatcctgaaaagtttatgtaaataagttgaaaacatctaatttacatgtaataag 9323492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 14492302 - 14492370
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||||||||||  |||||| ||| |||| || |||| |||||||||||  ||||||| ||||    
T  14492302 tataagctgttttcataagttatcctagagagtttgtggaaatcagctgaaaacaatttatgaatatgt 14492370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 17241313 - 17241253
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgta 273  Q
    ||||||| | ||||| | ||| ||||||| ||||||| |||||||| ||||||||||||||    
T  17241313 ttttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgta 17241253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 30523668 - 30523740
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||| ||||||||||| | ||||  |||| || |||||||| ||||||||||||  ||||| ||||||    
T  30523668 ttttcataagctatccttgagaggttatagaaattagttgaaaacagcttatgaacatggcataagttgtttc 30523740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 34404763 - 34404719
Alignment:
Q  236 tttatgaaaataagctgaaaacatcttatgaacatgtaataagat 280  Q
    |||||||||||| |||||||||| |||||| |||||| |||||||    
T  34404763 tttatgaaaatatgctgaaaacagcttatgtacatgtcataagat 34404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 34430533 - 34430469
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    |||||||| ||||||||||| ||||| | |||   |||||||||||||||||||| | |||||||    
T  34430533 gttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 41817170 - 41817248
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||||| ||| | ||||| ||||||||||||||||  |||| ||||||| |||||||||||    
T  41817170 taagctattttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttt 41817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 5759645 - 5759576
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaa-acatcttatgaacatgt 272  Q
    |||||||||||||||||| |||| || |||||||| |||||||||||||||| ||| |||||| ||||||    
T  5759645 tataagctgttttcataagctattctggagggtttgtgaaaataagctgaaacacaacttatggacatgt 5759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 22681260 - 22681187
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| |||||||||||||||||| ||||||| |||   ||||| ||||||||| |||||| |||||||||||||    
T  22681260 taagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 787341 - 787412
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||||||| | || |||||||| | |||||||||||||| |||||| |||||| ||||| |||||    
T  787341 ttttcataaactatcttagatggtttatggagataagctgaaaacagcttatggacatgtcataagctgttt 787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 1625895 - 1625966
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    ||||||||||| ||||||||||| ||||| | |||   ||| |||||| |||||||||||||||||||||||    
T  1625895 taagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacat 1625966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 10567056 - 10567138
Alignment:
Q  203 ttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||||| |||||| |||||||||| || ||| | || ||||||| ||||||||||| ||||||| ||||| ||||| ||||||    
T  10567056 ttataaactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatgatcatgtcataagctgtttc 10567138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 11488277 - 11488339
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    ||||||||| |||||||| ||||||| ||| | ||||| |||||||||||||||| |||||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataagctgaaaacaacttatga 11488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    ||||||||||| ||||| | ||| | |||||||||||||||||||||| ||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 9174815 - 9174880
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||| ||||| |  || | |||||||||||||||||||| | ||||||||||    
T  9174815 tataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 272
Target Start/End: Complemental strand, 10198555 - 10198482
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| |||| |||||||| |||| ||||||| ||| | ||||| ||||||||||| |||| |||||||||||||    
T  10198555 taagatataggctgtttttataatctatcctagagagattatggaaataagctgacaacagcttatgaacatgt 10198482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 19333392 - 19333327
Alignment:
Q  207 aagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    ||||||||||| ||||||||  | ||| | ||||||||||||||||| |||| |||||||||||||    
T  19333392 aagctgttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgt 19333327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 33941904 - 33941989
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||  ||||||||||| ||||| | ||| |||||||| |||||| ||||| || ||||||||| ||| ||||| |||||    
T  33941904 taagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttt 33941989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 44443330 - 44443387
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||| |||||||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 3235454 - 3235390
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaac 268  Q
    ||||||||||||||||| |||||| |  |  ||||||| |||||||||||||||| |||||||||    
T  3235454 tataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatgaac 3235390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 9477947 - 9478003
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaa 255  Q
    ||||||||||| ||||||||||| ||||||| ||| | ||||||||||||| |||||    
T  9477947 taagttataagttgttttcataagctatcctggagaggttatgaaaataagttgaaa 9478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 29316845 - 29316765
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||||||| | ||||| | |||   ||||| |||||||||||||| | ||||||||||||| ||||| |||||    
T  29316845 tataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctgttt 29316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 33526036 - 33525956
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||| ||||||||| |||| || || |||||||  ||||||||||||| || |||||| |||||| ||||| ||||||    
T  33526036 ataagcttttttcataagctatactagaaggtttatagaaataagctgaaaccaacttatggacatgttataagttgtttc 33525956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 4026816 - 4026883
Alignment:
Q  203 ttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||||||||||||||||||| ||||||  ||   |||||||||||||||||||||  |||| ||||||    
T  4026816 ttataagctgttttcataaattatcctgaagaacttatgaaaataagctgaaaactgcttaggaacat 4026883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 25790140 - 25790207
Alignment:
Q  218 ataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| ||||||| ||| | ||||||||||||| | |||||| |||| |||||||||||||| ||||||    
T  25790140 ataatctatcctggagagcttatgaaaataagttcaaaacagcttaggaacatgtaataagctgtttc 25790207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 33942145 - 33942224
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||| |||||| ||||||||||| | ||| | ||| | | |||||||| ||||||||||| ||||||||||||| |||||    
T  33942145 taagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataag 33942224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 1742107 - 1742021
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| |||||||||||||||||| ||||| |  || ||||||| ||||||| |||| | | |||||| |||||| ||||| ||||||    
T  1742107 taagatataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttc 1742021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 10563633 - 10563547
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||| ||||||||||| |||| ||  || | ||| |||||||||||||||| | |||||| |||||| ||| | ||||||    
T  10563633 taagttataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcataggctgtttc 10563547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 10884591 - 10884525
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacat 270  Q
    |||||||||||||||||| ||||||| ||| | ||||||||||||| ||| |||  |||||| ||||    
T  10884591 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 10884525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 14666543 - 14666629
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||| |||||||| || ||||| | |   | ||||||||||||| |||||||| | ||||||||||| ||||| ||||||    
T  14666543 taagttataagttgttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacctatgaacatgtcataagttgtttc 14666629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 32821809 - 32821891
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttct 286  Q
    ||||| |||||||||||| |||||||  || | ||||  |||||| ||||||||| |||||| |||||| ||||| |||||||    
T  32821809 tataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttct 32821891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Original strand, 43141866 - 43141952
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    |||| |||||| ||||||||||| |||||||  || ||||||| ||||||  |||||||| ||||||  ||||| ||||| ||||||    
T  43141866 taagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgtttc 43141952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 1939396 - 1939323
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtt 283  Q
    |||||||||||| |||| || ||| | ||||| ||||||| |||||||| |||||| |||||| ||||| ||||    
T  1939396 ctgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 13630350 - 13630297
Alignment:
Q  205 ataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    ||||| ||||||| ||| ||||||||||| |||||||| |||||| ||||||||    
T  13630350 ataagttgttttcctaatctatccttgagagtttatgacaataagttgaaaaca 13630297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 18179315 - 18179230
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||||||| |||||||| ||||||| |||   ||| |||||||||||||||| | || ||| ||||||  ||||||||||    
T  18179315 taagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttt 18179230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 33192164 - 33192263
Alignment:
Q  169 aaataaagtcaagatattttcatataagttt---aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatg 265  Q
    ||||||||||||  | ||||||||||||||    || |||| ||||| |||||||| ||||||| ||| | |||| || |||||||||||||| ||||||    
T  33192164 aaataaagtcaaactgttttcatataagttataaaacttatgagctggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatg 33192263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 40682468 - 40682400
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaaca 269  Q
    ||||||||||| ||||||||||  |||| |||||   ||||||||||||| |||||||| ||||||||||    
T  40682468 aagttataagcagttttcataagatatc-ttgagaacttatgaaaataagttgaaaacaacttatgaaca 40682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 7928336 - 7928304
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||||||| ||||||||||    
T  7928336 ttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 11063521 - 11063569
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||||||| |||||| |||||| |||||| |||| |||||||    
T  11063521 ttatgaaaataagctaaaaacaacttatggacatgtcataatatgtttc 11063569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 13736363 - 13736303
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    |||||||||||||||||| |||| || ||| | ||||||||||||  |||||||| |||||    
T  13736363 tataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttat 13736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 19977994 - 19978058
Alignment:
Q  251 tgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttcgcaagtg 315  Q
    |||||||| ||||||||| ||| ||||| |||||||  ||| | ||||||||||| |||||||||    
T  19977994 tgaaaacaacttatgaacgtgttataagttgtttctataagttctctcaaacagtctcgcaagtg 19978058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 30552705 - 30552609
Alignment:
Q  213 ttttcataaactatccttgagggtttatgaaaataagctgaaaa-catcttatgaacatgtaataagatgtttcttgaagctttctcaaacagtttc 308  Q
    ||||||||||||||||| ||| | ||||| ||||||||| |||| || |||||  |||||| ||||| ||||||   || || ||||||||||||||    
T  30552705 ttttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgtttcgataacctatctcaaacagtttc 30552609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 33319882 - 33319830
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    ||||| |||||||||||||||||| | |||   ||||||||||||||||||||    
T  33319882 tataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 41809282 - 41809234
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||| ||||||    
T  41809282 ttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttc 41809234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 43511118 - 43511150
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaaca 269  Q
    |||||||||||||||||||||| ||||||||||    
T  43511118 ttatgaaaataagctgaaaacagcttatgaaca 43511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 6552362 - 6552288
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    ||||| || ||||||||||||||| |  || |||||||||||||||||||||||| |||||||| |||| |||||    
T  6552362 tataaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataag 6552288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 24363673 - 24363603
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||||||| ||||||||||| ||||||| ||| | ||||| |||||||||||||||| |||||| ||||||    
T  24363673 gttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 38010709 - 38010782
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgt 272  Q
    |||| |||||||||||||||||| ||||||| |||   ||||| ||||||||| |||||| |||||||||||||    
T  38010709 taagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 27378892 - 27378836
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatga 266  Q
    |||||||||||||||||||| ||| | |||||||||||| ||||||||| |||||||    
T  27378892 ctgttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 36598387 - 36598327
Alignment:
Q  243 aaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaaca 303  Q
    |||||||||||||||| ||||||||||||| ||||||||||||   ||||| |||||||||    
T  36598387 aaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaaca 36598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 7521268 - 7521327
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacat 259  Q
    |||| |||||||||||| |||||||||||| ||| | || ||||||||||||||||||||    
T  7521268 aagtcataagctgttttaataaactatcctagagagcttctgaaaataagctgaaaacat 7521327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 44151555 - 44151477
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||| |||||| ||||||||||||||||| |  |  | ||||| ||||||||||||||||||||||| |||||| ||||    
T  44151555 taagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 44821954 - 44822019
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttat 264  Q
    ||||||||||||||||||||||| |||| || |||   ||||||||||||| |||||||| |||||    
T  44821954 taagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 9038112 - 9038191
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||| |||||||||||||||||| | |||   || |||||||||||||||||||  |||||||||||| ||||| |||||    
T  9038112 tataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaaca-attatgaacatgtcataagctgttt 9038191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 39907798 - 39907870
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    |||| ||||| |||||||||||||||||| | |||   | |||||||||||||||||||| || |||||||||    
T  39907798 taagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg 39907870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 46082029 - 46082116
Alignment:
Q  199 taagttataagctgttttcataaac--tatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    ||||||||||| |||||||||| ||  ||| || ||| | |||||||||||||||||||||| ||||||  ||||| ||||| |||||    
T  46082029 taagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttt 46082116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 7244686 - 7244753
Alignment:
Q  210 ctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    |||||||||||| ||||  | ||| | |||||||||||||||||||||| ||||||| ||||| ||||    
T  7244686 ctgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataa 7244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 9423662 - 9423591
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    ||||||||||| |||| ||||||| ||| | || |  |||||||||||||||| ||||||||||||| ||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataa 9423591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 11048060 - 11048107
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||    
T  11048060 ttatgagaataagctgaaaacagcttatgaacatgtcataagttgttt 11048107  T

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Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 34754877 - 34754779
Alignment:
Q  206 taagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagt 305  Q
    |||| ||||||||||||||||||| ||| | | ||| |||||||||||||||| |||||   | ||| |||||||||||  | ||||| |||||||||||    
T  34754877 taagttgttttcataaactatcct-gagagctgatggaaataagctgaaaacaacttataggcttgtcataagatgttttcttaagctctctcaaacagt 34754779  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 43219681 - 43219634
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| |||||    
T  43219681 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttt 43219634  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 47427377 - 47427326
Alignment:
Q  200 aagttataagctgttttcataaactatccttgagggtttatgaaaataagct 251  Q
    |||||||||||| |||||||||||||| |||||| |||||  ||||||||||    
T  47427377 aagttataagctattttcataaactattcttgagagtttaaaaaaataagct 47427326  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 529379 - 529449
Alignment:
Q  208 agctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataag 278  Q
    |||||||||||||| ||||| | ||| | ||||||||||| | |||||||| ||||||||| ||| |||||    
T  529379 agctgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataag 529449  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 35007633 - 35007667
Alignment:
Q  240 tgaaaataagctgaaaacatcttatgaacatgtaa 274  Q
    ||||||||||||||||||| |||||||||||||||    
T  35007633 tgaaaataagctgaaaacaacttatgaacatgtaa 35007667  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 25130159 - 25130086
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataa 277  Q
    ||||||||||||||| || ||||| | ||   ||| |||||||| |||||||||| ||||||||||||| ||||    
T  25130159 tataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataa 25130086  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 44615179 - 44615094
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||| ||||| ||||||||||||  || ||||||| ||||||| ||||||  |||||||| ||| || |||||| ||||| |||||    
T  44615179 taagctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttt 44615094  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 514767 - 514819
Alignment:
Q  204 tataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaa 256  Q
    |||||||||||||||||| ||||||| ||| | || | |||||||||||||||    
T  514767 tataagctgttttcataagctatcctggagagcttgtcaaaataagctgaaaa 514819  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 5276266 - 5276334
Alignment:
Q  239 atgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagttt 307  Q
    ||||||||||| |||||||| || ||||| |||| |||||||||||    ||||| |||||||||||||    
T  5276266 atgaaaataaggtgaaaacaactaatgaagatgtcataagatgtttgcataagctctctcaaacagttt 5276334  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 15075160 - 15075088
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatg 271  Q
    ||||||||||| | ||||||||||||| | | ||| | ||||| ||||||||| |||||| |||||| |||||    
T  15075160 taagttataagttattttcataaactaccttagagagcttatggaaataagctaaaaacagcttatgtacatg 15075088  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 18962644 - 18962588
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||||||| ||||||||||| ||||| | ||||  ||||||||||||| ||||||||    
T  18962644 gttataaggtgttttcataagctatcttggaggccttatgaaaataaggtgaaaaca 18962588  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 18965782 - 18965726
Alignment:
Q  202 gttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaaca 258  Q
    |||||||| ||||||||||| ||||| | ||||  ||||||||| ||||||||||||    
T  18965782 gttataagttgttttcataagctatcttggaggtcttatgaaaacaagctgaaaaca 18965726  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 40689061 - 40688993
Alignment:
Q  199 taagttataagctgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaa 267  Q
    |||| |||||||||| ||||||| ||||||| ||    ||||||||||||||| |||||| ||||||||    
T  40689061 taagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatgaa 40688993  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 48157157 - 48157089
Alignment:
Q  237 ttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttcttgaagctttctcaaacagt 305  Q
    ||||| |||||||||||||||| |||||| |||||  ||||| |||||||  ||||| || ||||||||    
T  48157157 ttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagt 48157089  T

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Target: scaffold0608 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 9671 - 9627
Alignment:
Q  240 tgaaaataagctgaaaacatcttatgaacatgtaataagatgttt 284  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||    
T  9671 tgaaaataagctaaaaacagcttatgaacatgtaataagttgttt 9627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 306333 - 306407
Alignment:
Q  211 tgttttcataaactatccttgagggtttatgaaaataagctgaaaacatcttatgaacatgtaataagatgtttc 285  Q
    ||||||||||| ||||||| ||| | ||||| || ||||||||||||| ||||||  ||||| ||||| ||||||    
T  306333 tgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttc 306407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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