View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0924_high_14 (Length: 213)
Name: NF0924_high_14
Description: NF0924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0924_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48948758 - 48948639
Alignment:
| Q |
1 |
ttcttttttggttcttttccttttcatactgaagatgtcaaaaatcaagagaaaggtgaaaaatatcaaatttgtcatttctgcttatacagaatggttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48948758 |
ttcttttttggttcttttccttttcatactgaagatgtcaaaaatcaagagaaaggtgaaaaatatcaaatttgtcatttctgcttatacagaatggttt |
48948659 |
T |
|
| Q |
101 |
ttcatctcctatgtatatgt |
120 |
Q |
| |
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|||||||||||||||||||| |
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|
| T |
48948658 |
ttcatctcctatgtatatgt |
48948639 |
T |
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