View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0924_low_19 (Length: 312)
Name: NF0924_low_19
Description: NF0924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0924_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 472192 - 472069
Alignment:
| Q |
73 |
aaaatcaaatgtttaagtagcaaaaagtacaaatcaataaattcaaaacagtagcatcatgtagtcaactatactccactagttacttcctttgaaatca |
172 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
472192 |
aaaatcaaatgtttaagtagcaaaaagtactaatcaataaattcaaaacagtagcatcatgtagtcaactatactccactagttacttcctttgaaatca |
472093 |
T |
|
| Q |
173 |
ctaacggatagcatataccaaggg |
196 |
Q |
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|||||||||||||||||||||||| |
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| T |
472092 |
ctaacggatagcatataccaaggg |
472069 |
T |
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