View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0924_low_32 (Length: 251)
Name: NF0924_low_32
Description: NF0924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0924_low_32 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 19395522 - 19395759
Alignment:
| Q |
13 |
aatatcatgattaaaacttaagactaaagtataatctaatcataacatcttctgaaaaaactctccaagttttctctcgatttctcactcttcatggtat |
112 |
Q |
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| T |
19395522 |
aatatcatgattaaaacttaagactaaagtataatctaatcataacatcttatgaaaaaactct---agttttctctcgatttctcactcttcatggtat |
19395618 |
T |
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| Q |
113 |
tttatcttttggcatgtgcttgggatttgtgacaaaatttctcaagttgtttggacttcaaatctccattttacttggttttcttgcttccaaaatttc- |
211 |
Q |
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| T |
19395619 |
tttatcttttggcatgtgcttgggatttgtgacaaaatttctcaagttgtttggacttcaaatctccattttacttggttttcttgcttccaaaatttct |
19395718 |
T |
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| Q |
212 |
-tgagatgtctttcatcggatcaactcaatggtttatacca |
251 |
Q |
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| T |
19395719 |
atgagatgtctttcatcggatcaactcaatggtttatacca |
19395759 |
T |
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