View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0925_high_32 (Length: 392)
Name: NF0925_high_32
Description: NF0925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0925_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 104 - 291
Target Start/End: Complemental strand, 43768206 - 43768018
Alignment:
| Q |
104 |
agttggaaccattggtgttaacatttgcaactcagcaaacatctgtacgtgccaaatgcaaaattaaggttagagttttatgattgatttcatgtccaag |
203 |
Q |
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| T |
43768206 |
agttggaaccattggtgttaacatttgcaactcagcaaacatctgtacgtaccaaatgcaaaattaaggttagagttttatgattgatttcatgtccaag |
43768107 |
T |
|
| Q |
204 |
ttaagtagtatatgctctgtgcctccacagtatttatca-ttcgaaaactgtgcaatatgtccacatcttagaatttcctctacctatg |
291 |
Q |
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| T |
43768106 |
ttaagtagtatatgctctgtgcctccacagtatttatcatttggaaaactgtgcaatatgtccacatcttagaatttcctctacctatg |
43768018 |
T |
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