View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0925_low_127 (Length: 230)

Name: NF0925_low_127
Description: NF0925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0925_low_127
NF0925_low_127
[»] chr6 (8 HSPs)
chr6 (2-165)||(23998200-23998363)
chr6 (2-165)||(16380539-16380702)
chr6 (2-165)||(16648135-16648298)
chr6 (2-165)||(1646980-1647143)
chr6 (2-165)||(14130421-14130584)
chr6 (2-165)||(16099961-16100130)
chr6 (2-97)||(23025912-23026007)
chr6 (13-155)||(14643664-14643803)
[»] scaffold0225 (1 HSPs)
scaffold0225 (2-165)||(25513-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (2-165)||(15027-15190)
scaffold0162 (2-165)||(11198-11361)
[»] chr8 (11 HSPs)
chr8 (2-165)||(16875559-16875722)
chr8 (2-165)||(21848801-21848964)
chr8 (2-160)||(20650819-20650977)
chr8 (2-165)||(22436457-22436620)
chr8 (2-165)||(23155506-23155667)
chr8 (15-160)||(23902323-23902468)
chr8 (2-165)||(21195004-21195166)
chr8 (2-108)||(16414302-16414408)
chr8 (23-146)||(19869866-19869989)
chr8 (45-133)||(24631173-24631261)
chr8 (58-132)||(23887215-23887289)
[»] chr7 (13 HSPs)
chr7 (2-165)||(7825977-7826140)
chr7 (2-165)||(27105804-27105967)
chr7 (2-165)||(27172358-27172521)
chr7 (2-165)||(17925727-17925890)
chr7 (2-158)||(13378969-13379123)
chr7 (2-165)||(4442005-4442168)
chr7 (2-165)||(13458112-13458275)
chr7 (19-157)||(15716950-15717088)
chr7 (50-155)||(17143354-17143459)
chr7 (4-146)||(39178-39320)
chr7 (98-155)||(12204904-12204961)
chr7 (98-155)||(14262349-14262406)
chr7 (58-150)||(48813338-48813430)
[»] chr5 (5 HSPs)
chr5 (2-165)||(23507686-23507849)
chr5 (2-165)||(24583212-24583375)
chr5 (2-165)||(21935391-21935554)
chr5 (24-155)||(20250509-20250640)
chr5 (100-132)||(21337595-21337627)
[»] chr3 (8 HSPs)
chr3 (2-165)||(8272659-8272822)
chr3 (2-165)||(30139523-30139686)
chr3 (2-165)||(30149074-30149237)
chr3 (2-165)||(13965612-13965775)
chr3 (2-165)||(15611820-15611983)
chr3 (2-158)||(15948730-15948886)
chr3 (2-165)||(6151113-6151276)
chr3 (2-165)||(25768035-25768198)
[»] chr1 (7 HSPs)
chr1 (2-165)||(20829485-20829648)
chr1 (2-165)||(20927157-20927320)
chr1 (2-165)||(20527156-20527319)
chr1 (2-160)||(41215949-41216107)
chr1 (10-116)||(22133857-22133963)
chr1 (28-153)||(21200998-21201123)
chr1 (2-71)||(35930918-35930987)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-165)||(42377-42540)
[»] chr2 (8 HSPs)
chr2 (2-165)||(24829749-24829912)
chr2 (2-165)||(22279824-22279987)
chr2 (2-158)||(25130335-25130491)
chr2 (2-165)||(24568229-24568392)
chr2 (2-165)||(22760130-22760293)
chr2 (36-155)||(10037927-10038046)
chr2 (36-155)||(10098312-10098431)
chr2 (98-155)||(23112465-23112522)
[»] scaffold0302 (2 HSPs)
scaffold0302 (2-165)||(7272-7435)
scaffold0302 (2-165)||(330-493)
[»] chr4 (5 HSPs)
chr4 (2-157)||(15291179-15291334)
chr4 (28-165)||(12340912-12341049)
chr4 (98-155)||(15323315-15323372)
chr4 (58-131)||(14696235-14696308)
chr4 (98-155)||(15072457-15072514)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-160)||(7885-8043)
[»] scaffold0124 (1 HSPs)
scaffold0124 (2-165)||(5830-5995)
[»] scaffold0170 (1 HSPs)
scaffold0170 (2-165)||(34204-34367)
[»] scaffold0077 (1 HSPs)
scaffold0077 (2-165)||(26290-26453)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-165)||(8850-9013)
[»] scaffold0218 (2 HSPs)
scaffold0218 (2-157)||(1976-2131)
scaffold0218 (6-165)||(26446-26605)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-165)||(132513-132676)
scaffold0008 (2-113)||(25938-26049)
[»] scaffold0369 (1 HSPs)
scaffold0369 (2-140)||(6888-7026)
[»] scaffold1488 (1 HSPs)
scaffold1488 (2-157)||(827-982)
[»] scaffold0692 (1 HSPs)
scaffold0692 (2-165)||(1908-2071)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-165)||(24295-24458)
[»] scaffold0610 (1 HSPs)
scaffold0610 (2-160)||(6953-7111)
[»] scaffold0561 (1 HSPs)
scaffold0561 (2-165)||(7029-7192)
[»] scaffold0467 (1 HSPs)
scaffold0467 (2-165)||(1645-1808)
[»] scaffold0387 (1 HSPs)
scaffold0387 (2-165)||(16177-16340)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-160)||(970-1128)
[»] scaffold0021 (3 HSPs)
scaffold0021 (2-165)||(21871-22034)
scaffold0021 (2-165)||(31447-31610)
scaffold0021 (60-165)||(7333-7438)
[»] scaffold0092 (1 HSPs)
scaffold0092 (13-153)||(238-378)
[»] scaffold0462 (1 HSPs)
scaffold0462 (2-106)||(2117-2221)
[»] scaffold0635 (1 HSPs)
scaffold0635 (36-155)||(9024-9143)
[»] scaffold0719 (1 HSPs)
scaffold0719 (24-86)||(4785-4847)
[»] scaffold0465 (1 HSPs)
scaffold0465 (2-60)||(13649-13707)
[»] scaffold0585 (1 HSPs)
scaffold0585 (98-155)||(5209-5266)
[»] scaffold0058 (1 HSPs)
scaffold0058 (14-77)||(76630-76693)
[»] scaffold0083 (1 HSPs)
scaffold0083 (58-132)||(9114-9188)
[»] scaffold0827 (1 HSPs)
scaffold0827 (58-131)||(5259-5332)
[»] scaffold0730 (1 HSPs)
scaffold0730 (98-155)||(121-178)
[»] scaffold0029 (1 HSPs)
scaffold0029 (98-155)||(114688-114745)
[»] scaffold0026 (1 HSPs)
scaffold0026 (98-155)||(50939-50996)
[»] scaffold0016 (1 HSPs)
scaffold0016 (98-155)||(176464-176521)
[»] scaffold0270 (2 HSPs)
scaffold0270 (100-132)||(6023-6055)
scaffold0270 (100-132)||(13153-13185)


Alignment Details
Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23998363 - 23998200
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16380539 - 16380702
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16380702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16648135 - 16648298
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16648298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1646980 - 1647143
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 1647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 14130584 - 14130421
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || || ||||||||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtg 14130421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 16100130 - 16099961
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  102 tgcgccaggtgtct------ttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || |||||||||||      ||||||| || |||||||||||||||||||| ||| ||||||||| ||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtg 16099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 14643664 - 14643803
Alignment:
Q  13 agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 112  Q
    ||||| ||| |||| ||||| ||||| ||||| |||||||| || ||||||||||  || |||||||||||||||||||| ||  || ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  113 tctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||| |||||||| ||||||||||| || ||||||||| ||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatccttatttgga 14643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 25676 - 25513
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 25513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 15190 - 15027
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 11198 - 11361
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 16875559 - 16875722
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16875722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21848801 - 21848964
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21848964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 20650819 - 20650977
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||||||||||||||| || || || ||||||||||||||| ||||||||||||||||||    
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgtt 20650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 22436620 - 22436457
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtg 22436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 23155506 - 23155667
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtg 23155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 23902468 - 23902323
Alignment:
Q  15 agtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtc 114  Q
    |||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  23902468 agtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtc 23902369  T
Q  115 tttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    || |||||||| |||||||||||||||||||||| |||||||||||    
T  23902368 ttcatggaatatatgaatagaatatttcatccttttctggaccgtt 23902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21195004 - 21195166
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| | |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 21195166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| | ||||| |||||  ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
Q  102 tgcgcca 108  Q
    |||||||    
T  16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 19869989 - 19869866
Alignment:
Q  23 cggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatgga 122  Q
    ||||||||||||| || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || ||||||||    
T  19869989 cggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatgga 19869890  T
Q  123 atacatgaatagaatatttcatcc 146  Q
     || ||||| ||||| || |||||    
T  19869889 gtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 24631173 - 24631261
Alignment:
Q  45 gttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaata 133  Q
    |||| |||| |||||| | ||||||||||||||||| ||| ||||||| ||  |||||| || |||  | |||||||||||||||||||    
T  24631173 gttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaata 24631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 23887289 - 23887215
Alignment:
Q  58 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 132  Q
    |||||||| || |||||||| |||||||| || || ||  |||||||||||| ||| |||||||| |||||||||    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaat 23887215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 7826140 - 7825977
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 27105804 - 27105967
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 27172521 - 27172358
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 17925890 - 17925727
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtg 17925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 158  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 4442168 - 4442005
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| ||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtg 4442005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 13458275 - 13458112
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||| |||||||||| |||||| ||||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| |||| ||||    
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtg 13458112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 15716950 - 15717088
Alignment:
Q  19 aaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttta 118  Q
    |||||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||  || |||||| |||  ||||||| |    
T  15716950 aaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttca 15717049  T
Q  119 tggaatacatgaatagaatatttcatccttatctggacc 157  Q
    ||||||| |||||||||||||| ||||||| ||||||||    
T  15717050 tggaatatatgaatagaatattccatccttttctggacc 15717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 17143354 - 17143459
Alignment:
Q  50 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 149  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||| |||||||| ||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  150 tctgga 155  Q
    | ||||    
T  17143454 tttgga 17143459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 146
Target Start/End: Original strand, 39178 - 39320
Alignment:
Q  4 catcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatg 103  Q
    ||||||||  |||| ||| ||||||||||||  || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |    
T  39178 catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg 39277  T
Q  104 cgccaggtgtctttatggaatacatgaatagaatatttcatcc 146  Q
    ||||||| || |||||||| || ||||| ||||| || |||||    
T  39278 cgccaggagtttttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 12204904 - 12204961
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 12204961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 14262349 - 14262406
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctgga 14262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 48813338 - 48813430
Alignment:
Q  58 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttat 150  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||||||| |||| |||||||| ||||||||| | || |||||| |||||    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttat 48813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 23507849 - 23507686
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 24583375 - 24583212
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24583212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21935391 - 21935554
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 20250509 - 20250640
Alignment:
Q  24 ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaa 123  Q
    ||||||||| || || |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||  ||||||||||    
T  20250509 ggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaa 20250608  T
Q  124 tacatgaatagaatatttcatccttatctgga 155  Q
    || |||||||| || || ||||||||| ||||    
T  20250609 tatatgaataggattttccatccttatttgga 20250640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 21337595 - 21337627
Alignment:
Q  100 aatgcgccaggtgtctttatggaatacatgaat 132  Q
    |||||||||||||| ||||||||||||||||||    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaat 21337627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 8272659 - 8272822
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 8272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 30139686 - 30139523
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 30149237 - 30149074
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 13965612 - 13965775
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 13965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 15611983 - 15611820
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 15611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 15948730 - 15948886
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 158  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccg 15948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 6151113 - 6151276
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||    
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtg 6151276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 25768198 - 25768035
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| || || || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 25768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 20829485 - 20829648
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 20829648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 20927320 - 20927157
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtg 20927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 20527319 - 20527156
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||| ||||||||| ||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtg 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 41215949 - 41216107
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| |||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgtt 41216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  10 attagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 109  Q
    ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  110 gtgtctt 116  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 21200998 - 21201123
Alignment:
Q  28 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 127  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| |||||||| |    
T  21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
Q  128 tgaatagaatatttcatccttatctg 153  Q
    ||||||||||||||||||||||||||    
T  21201098 tgaatagaatatttcatccttatctg 21201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatga 71  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 42540 - 42377
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 42377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 24829749 - 24829912
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 22279987 - 22279824
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22279987 atcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 22279888  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  22279887 tgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtg 22279824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 25130491 - 25130335
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 158  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||  ||||||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccg 25130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 24568229 - 24568392
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| |||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24568392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 22760130 - 22760293
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| ||||||||||||||||||||||| | ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| ||||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||    
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtg 22760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 10037927 - 10038046
Alignment:
Q  36 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 135  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  10038027 atcttccatccttatttgga 10038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 10098312 - 10098431
Alignment:
Q  36 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 135  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  10098412 atcttccatccttatttgga 10098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 23112522 - 23112465
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    ||||||||||  |||| |||||||| |||||||||||||| || ||| ||||||||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctgga 23112465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 7435 - 7272
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 493 - 330
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 15291179 - 15291334
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 157  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggacc 15291334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 12340912 - 12341049
Alignment:
Q  28 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 127  Q
    |||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  128 tgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||| ||||| ||||||| ||||||| ||| ||||    
T  12341012 tgaataggatattccatccttttctggactgttttgtg 12341049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 15323372 - 15323315
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctgga 15323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 14696308 - 14696235
Alignment:
Q  58 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaa 131  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | |||||||||||||| |||||||| ||||||||    
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaa 14696235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 15072514 - 15072457
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| |||||||||||| | || ||| ||||||||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctgga 15072457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 7885 - 8043
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 5830 - 5995
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  102 tgcgccaggtgtcttta-tggaatacatgaat-agaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| ||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtg 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 34367 - 34204
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 34204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 26290 - 26453
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtg 26453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 8850 - 9013
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtg 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 1976 - 2131
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 157  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 26605 - 26446
Alignment:
Q  6 tcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcg 105  Q
    |||||| ||||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  106 ccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 132513 - 132676
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtg 132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  102 tgcgccaggtgt 113  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatt 140  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 827 - 982
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 157  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggacc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1908 - 2071
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| ||| ||||    
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtg 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 24458 - 24295
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||||||||||||||| ||||    
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    ||| ||||||||||| || || || ||||||| ||||||||||||||||||||||||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgtt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 7029 - 7192
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtg 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 1645 - 1808
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 16340 - 16177
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||| | || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtg 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||| | |||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 160  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgtt 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 21871 - 22034
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 22034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 31447 - 31610
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  102 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 165  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 31610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 7438 - 7333
Alignment:
Q  60 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgt 159  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  160 tctgtg 165  Q
    | ||||    
T  7338 tttgtg 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 378 - 238
Alignment:
Q  13 agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 112  Q
    ||||| ||||||||| ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  113 tctttatggaatacatgaatagaatatttcatccttatctg 153  Q
    |||| || || || |||||||||||||||||||||||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctg 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 101  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  102 tgcgc 106  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 9143 - 9024
Alignment:
Q  36 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 135  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  136 atatttcatccttatctgga 155  Q
    || || ||||||||| ||||    
T  9043 atcttccatccttatttgga 9024  T

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Target: scaffold0719 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
Q  24 ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 86  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  2 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtat 60  Q
    |||||||||||| ||| |||||  |||||||||||||||| ||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 5209 - 5266
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 5266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 76693 - 76630
Alignment:
Q  14 gagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattc 77  Q
    |||||||||||||  |||||||||||||||| ||||| || || |||||||||| ||| |||||    
T  76693 gagtaaaggcggagtatatatccaaaactgcattccggactagatatggacactttgaatattc 76630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 9114 - 9188
Alignment:
Q  58 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 132  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||||||||| |||||||| |||||||||    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaat 9188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  58 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaa 131  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 121 - 178
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||||||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctgga 178  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 114745 - 114688
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| |||| |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctgga 114688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 50996 - 50939
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| || ||||||||||| |||||| | ||||||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctgga 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 176464 - 176521
Alignment:
Q  98 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 155  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttgga 176521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 6055 - 6023
Alignment:
Q  100 aatgcgccaggtgtctttatggaatacatgaat 132  Q
    |||||||||||||| ||||||||||||||||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaat 6023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 13185 - 13153
Alignment:
Q  100 aatgcgccaggtgtctttatggaatacatgaat 132  Q
    |||||||||||||| ||||||||||||||||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaat 13153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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