View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0925_low_135 (Length: 221)

Name: NF0925_low_135
Description: NF0925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0925_low_135
NF0925_low_135
[»] scaffold0197 (2 HSPs)
scaffold0197 (40-126)||(14292-14380)
scaffold0197 (40-126)||(19148-19236)
[»] chr8 (24 HSPs)
chr8 (40-126)||(10684247-10684335)
chr8 (40-126)||(35745405-35745493)
chr8 (40-126)||(25328262-25328349)
chr8 (40-126)||(39784807-39784893)
chr8 (40-121)||(6311311-6311393)
chr8 (40-121)||(7289915-7289997)
chr8 (40-121)||(33037807-33037889)
chr8 (40-121)||(36979391-36979474)
chr8 (40-121)||(4760075-4760158)
chr8 (40-121)||(10689143-10689226)
chr8 (40-121)||(30655660-30655743)
chr8 (40-121)||(18853167-18853251)
chr8 (40-121)||(18870561-18870645)
chr8 (40-121)||(1261954-1262037)
chr8 (40-108)||(26287915-26287985)
chr8 (40-108)||(26301172-26301242)
chr8 (40-108)||(26313166-26313236)
chr8 (48-121)||(4456050-4456125)
chr8 (48-121)||(31071229-31071304)
chr8 (65-121)||(7412381-7412438)
chr8 (48-111)||(26403240-26403305)
chr8 (48-121)||(6127243-6127319)
chr8 (48-121)||(19175754-19175829)
chr8 (67-121)||(23799576-23799632)
[»] chr7 (26 HSPs)
chr7 (40-126)||(24261306-24261394)
chr7 (40-126)||(24266185-24266273)
chr7 (40-126)||(16880087-16880174)
chr7 (40-126)||(16884943-16885030)
chr7 (40-126)||(19992327-19992414)
chr7 (40-126)||(31109567-31109654)
chr7 (40-126)||(24024310-24024397)
chr7 (40-121)||(12396925-12397007)
chr7 (40-121)||(18413654-18413736)
chr7 (40-115)||(4866744-4866820)
chr7 (40-121)||(2057979-2058062)
chr7 (40-126)||(21812223-21812309)
chr7 (40-121)||(12406345-12406427)
chr7 (40-121)||(20357548-20357630)
chr7 (40-121)||(1533444-1533527)
chr7 (40-121)||(18408777-18408860)
chr7 (40-121)||(21639822-21639905)
chr7 (40-121)||(21646020-21646103)
chr7 (48-121)||(55970-56045)
chr7 (48-121)||(29159825-29159901)
chr7 (65-121)||(44848684-44848741)
chr7 (48-110)||(21983306-21983370)
chr7 (48-121)||(46516309-46516385)
chr7 (48-121)||(49091683-49091759)
chr7 (65-121)||(2647695-2647753)
chr7 (48-89)||(5817303-5817344)
[»] chr6 (19 HSPs)
chr6 (40-126)||(6005431-6005519)
chr6 (40-126)||(33330428-33330516)
chr6 (40-126)||(16838758-16838846)
chr6 (40-126)||(33335925-33336013)
chr6 (40-122)||(28155557-28155640)
chr6 (40-126)||(6438515-6438601)
chr6 (40-126)||(14737560-14737647)
chr6 (40-121)||(22010686-22010768)
chr6 (40-121)||(11856988-11857070)
chr6 (40-121)||(5674770-5674853)
chr6 (40-126)||(14742420-14742507)
chr6 (40-118)||(28184519-28184598)
chr6 (48-121)||(5757478-5757553)
chr6 (60-121)||(22963734-22963797)
chr6 (60-121)||(23824596-23824659)
chr6 (48-121)||(5572240-5572316)
chr6 (48-121)||(21356058-21356133)
chr6 (48-110)||(10077176-10077240)
chr6 (65-108)||(22709058-22709102)
[»] chr5 (30 HSPs)
chr5 (40-126)||(2785389-2785477)
chr5 (40-126)||(31396976-31397064)
chr5 (40-126)||(28807557-28807643)
chr5 (40-126)||(37556606-37556693)
chr5 (40-126)||(37561428-37561515)
chr5 (40-126)||(31401833-31401921)
chr5 (40-126)||(33768193-33768281)
chr5 (40-126)||(33791330-33791418)
chr5 (40-121)||(1457151-1457233)
chr5 (39-121)||(30631419-30631502)
chr5 (40-121)||(43592293-43592375)
chr5 (40-121)||(43598738-43598820)
chr5 (40-121)||(43604230-43604312)
chr5 (40-121)||(43609722-43609804)
chr5 (40-126)||(15044700-15044787)
chr5 (40-121)||(27449828-27449910)
chr5 (40-121)||(31180228-31180310)
chr5 (40-121)||(27444984-27445066)
chr5 (40-121)||(38192187-38192270)
chr5 (40-121)||(38219412-38219495)
chr5 (43-121)||(35387679-35387759)
chr5 (40-121)||(24135862-24135945)
chr5 (48-121)||(9353332-9353407)
chr5 (48-121)||(36932350-36932425)
chr5 (65-121)||(10281791-10281849)
chr5 (65-121)||(15464572-15464629)
chr5 (48-121)||(3880321-3880397)
chr5 (65-121)||(11916971-11917029)
chr5 (57-121)||(12084175-12084241)
chr5 (66-121)||(19588787-19588844)
[»] chr3 (37 HSPs)
chr3 (40-126)||(2672914-2673002)
chr3 (40-126)||(2677070-2677158)
chr3 (40-126)||(8512231-8512319)
chr3 (40-126)||(8517111-8517199)
chr3 (40-126)||(18656449-18656536)
chr3 (40-126)||(32475499-32475585)
chr3 (40-126)||(32480357-32480443)
chr3 (40-121)||(22173184-22173266)
chr3 (40-121)||(28503865-28503947)
chr3 (40-126)||(24968121-24968209)
chr3 (40-121)||(2671586-2671669)
chr3 (40-121)||(7167258-7167341)
chr3 (40-121)||(8477376-8477459)
chr3 (40-121)||(8739063-8739146)
chr3 (40-121)||(9091301-9091384)
chr3 (40-121)||(40372795-40372878)
chr3 (69-121)||(28501698-28501750)
chr3 (40-121)||(1305962-1306045)
chr3 (40-121)||(26928591-26928674)
chr3 (48-121)||(32143343-32143418)
chr3 (65-121)||(27452998-27453055)
chr3 (48-121)||(8370476-8370551)
chr3 (48-121)||(16264372-16264447)
chr3 (48-121)||(27974942-27975017)
chr3 (48-121)||(40844674-40844749)
chr3 (65-121)||(6794703-6794760)
chr3 (48-121)||(1736294-1736370)
chr3 (48-121)||(18552872-18552948)
chr3 (48-121)||(36029115-36029191)
chr3 (48-121)||(48438236-48438312)
chr3 (48-121)||(21711245-21711320)
chr3 (48-108)||(27986449-27986511)
chr3 (48-108)||(33386669-33386731)
chr3 (48-121)||(3715991-3716067)
chr3 (40-68)||(10207948-10207976)
chr3 (48-121)||(30709779-30709855)
chr3 (48-121)||(40592771-40592847)
[»] chr2 (23 HSPs)
chr2 (40-126)||(19344435-19344523)
chr2 (40-126)||(19349293-19349381)
chr2 (40-126)||(39811972-39812059)
chr2 (40-121)||(44312613-44312695)
chr2 (42-126)||(32246804-32246889)
chr2 (40-121)||(11098927-11099010)
chr2 (40-121)||(14291502-14291585)
chr2 (40-121)||(3491764-3491847)
chr2 (40-121)||(9296401-9296484)
chr2 (39-121)||(25403646-25403730)
chr2 (40-121)||(25398509-25398592)
chr2 (40-121)||(21629957-21630041)
chr2 (40-108)||(40738857-40738926)
chr2 (57-121)||(25407653-25407719)
chr2 (48-121)||(13569350-13569426)
chr2 (40-111)||(8040073-8040147)
chr2 (65-121)||(28259177-28259234)
chr2 (48-121)||(10445443-10445519)
chr2 (48-121)||(34388880-34388956)
chr2 (65-121)||(8390149-8390207)
chr2 (65-121)||(34682333-34682391)
chr2 (48-121)||(20522242-20522318)
chr2 (57-111)||(31056075-31056131)
[»] chr1 (23 HSPs)
chr1 (40-126)||(43988447-43988535)
chr1 (40-126)||(25445073-25445160)
chr1 (40-126)||(39445514-39445600)
chr1 (40-126)||(44023858-44023944)
chr1 (40-126)||(1054996-1055082)
chr1 (44-126)||(41390599-41390682)
chr1 (44-126)||(41398254-41398337)
chr1 (40-121)||(24787365-24787447)
chr1 (40-121)||(24202769-24202852)
chr1 (40-121)||(19358843-19358926)
chr1 (40-121)||(19361432-19361515)
chr1 (40-121)||(19380072-19380155)
chr1 (48-121)||(26644897-26644972)
chr1 (57-121)||(27104371-27104438)
chr1 (48-111)||(47703946-47704011)
chr1 (48-121)||(16124515-16124591)
chr1 (48-121)||(19072950-19073026)
chr1 (48-121)||(19120840-19120916)
chr1 (48-121)||(3281730-3281805)
chr1 (57-121)||(21536569-21536635)
chr1 (48-111)||(9476283-9476348)
chr1 (65-121)||(13604623-13604680)
chr1 (48-111)||(29651833-29651898)
[»] scaffold0259 (1 HSPs)
scaffold0259 (40-126)||(2234-2322)
[»] scaffold0028 (1 HSPs)
scaffold0028 (40-126)||(148939-149027)
[»] chr4 (23 HSPs)
chr4 (40-126)||(3814038-3814125)
chr4 (40-126)||(5732679-5732766)
chr4 (40-126)||(18855741-18855827)
chr4 (40-121)||(56146700-56146782)
chr4 (40-126)||(45357280-45357367)
chr4 (40-121)||(9224396-9224478)
chr4 (40-121)||(9229183-9229265)
chr4 (40-121)||(51520471-51520553)
chr4 (40-120)||(45347807-45347888)
chr4 (40-121)||(24741954-24742037)
chr4 (40-121)||(29760655-29760738)
chr4 (48-121)||(31985634-31985708)
chr4 (40-108)||(28468542-28468612)
chr4 (57-121)||(16623292-16623359)
chr4 (48-121)||(36315229-36315304)
chr4 (48-121)||(36329438-36329513)
chr4 (48-121)||(10047401-10047477)
chr4 (48-121)||(39246016-39246092)
chr4 (48-121)||(5396671-5396746)
chr4 (65-111)||(24333849-24333896)
chr4 (65-111)||(38152449-38152496)
chr4 (59-121)||(16630679-16630744)
chr4 (48-110)||(5143281-5143345)
[»] scaffold0464 (1 HSPs)
scaffold0464 (40-126)||(377-463)
[»] scaffold0355 (1 HSPs)
scaffold0355 (40-126)||(9626-9713)
[»] scaffold0135 (1 HSPs)
scaffold0135 (40-121)||(35051-35133)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-101)||(181973-182035)
[»] scaffold0188 (2 HSPs)
scaffold0188 (40-121)||(17952-18035)
scaffold0188 (40-121)||(24045-24128)
[»] scaffold0140 (1 HSPs)
scaffold0140 (48-121)||(8419-8494)
[»] scaffold0087 (1 HSPs)
scaffold0087 (65-121)||(43961-44018)
[»] scaffold0148 (1 HSPs)
scaffold0148 (65-121)||(10769-10827)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-121)||(133280-133337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (40-121)||(85696-85780)


Alignment Details
Target: scaffold0197 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 14380 - 14292
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14380 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 14292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 19236 - 19148
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  19236 cagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaatctag 19148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 10684335 - 10684247
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10684335 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 10684247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 35745405 - 35745493
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35745405 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 35745493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 25328349 - 25328262
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  25328349 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 25328262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 39784893 - 39784807
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39784893 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 39784807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 6311311 - 6311393
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6311311 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 6311393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 7289997 - 7289915
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  7289997 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 7289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 33037889 - 33037807
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  33037889 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 33037807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 36979391 - 36979474
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  36979391 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 36979474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 4760158 - 4760075
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  4760158 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 4760075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 10689226 - 10689143
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| | |||||||||||    
T  10689226 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaa 10689143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 30655660 - 30655743
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||| |||||||||||    
T  30655660 cagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaa 30655743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 18853251 - 18853167
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatat-gtgaatgtgttacaaaa-ggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||||| |||||||||||    
T  18853251 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaa 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 18870645 - 18870561
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatat-gtgaatgtgttacaaaa-ggttacaagaa 121  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||||| |||||||||||    
T  18870645 cagttcatccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaa 18870561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 1262037 - 1261954
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||| ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  1262037 cagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 1261954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26287915 - 26287985
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  26287915 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26301172 - 26301242
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  26301172 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 26313166 - 26313236
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  26313166 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 4456050 - 4456125
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  4456050 ccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 4456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 31071304 - 31071229
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  31071304 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 31071229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 7412381 - 7412438
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  7412381 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 7412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 26403305 - 26403240
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||    
T  26403305 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 6127243 - 6127319
Alignment:
Q  48 ccaatgtggcctaatctgggga-gagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||| |||||| |||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  6127243 ccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 6127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 19175829 - 19175754
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| |||||||| |||||||||||| |||| |||| ||||||||||  ||||||||||    
T  19175829 ccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaagaa 19175754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 23799632 - 23799576
Alignment:
Q  67 ggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  23799632 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23799576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 24261394 - 24261306
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24261394 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 24261306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 24266273 - 24266185
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24266273 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 24266185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 16880087 - 16880174
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  16880087 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctag 16880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 16884943 - 16885030
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  16884943 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatctag 16885030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 19992327 - 19992414
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  19992327 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctag 19992414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 31109654 - 31109567
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  31109654 cagttcagccaatatggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 31109567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 24024397 - 24024310
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  24024397 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaagactctag 24024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 12396925 - 12397007
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  12396925 cagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 12397007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 18413654 - 18413736
Alignment:
Q  40 cagttcagccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  18413654 cagttcagccaatatggcctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 18413736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 4866744 - 4866820
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggtta 115  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4866744 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 2057979 - 2058062
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  2057979 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 2058062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 21812309 - 21812223
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||| ||||| |||||    
T  21812309 cagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtgaa-gtcttacaaaaggttccaagactctag 21812223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 12406345 - 12406427
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  12406345 cagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 12406427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 20357630 - 20357548
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  20357630 cagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 20357548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 1533527 - 1533444
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||    
T  1533527 cagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 1533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 18408777 - 18408860
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  18408777 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaa 18408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 21639822 - 21639905
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  21639822 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagggttacaagaa 21639905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 21646020 - 21646103
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||| |||| |||| |||||| ||| |||||||||||    
T  21646020 cagttcagccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaa 21646103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 55970 - 56045
Alignment:
Q  48 ccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  55970 ccaatatgacctaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 56045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 29159825 - 29159901
Alignment:
Q  48 ccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  29159825 ccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 29159901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 44848741 - 44848684
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  44848741 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 44848684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 21983306 - 21983370
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaa 110  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||    
T  21983306 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 46516385 - 46516309
Alignment:
Q  48 ccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||| |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  46516385 ccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 46516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 49091683 - 49091759
Alignment:
Q  48 ccaatgtggcctaatctgggga-gagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || ||||||||||||| ||||||| |||||||||||| |||| |||| |||||||||||| ||||||||||    
T  49091683 ccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaa 49091759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 2647753 - 2647695
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  2647753 ggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 2647695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 5817344 - 5817303
Alignment:
Q  48 ccaatgtggcctaatctggggagagagcagctctccaatcca 89  Q
    ||||| || |||| ||||||||||||||||||||||||||||    
T  5817344 ccaatatgacctactctggggagagagcagctctccaatcca 5817303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 6005431 - 6005519
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6005431 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 6005519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 33330516 - 33330428
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33330516 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 33330428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 16838758 - 16838846
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16838758 cagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 16838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 33336013 - 33335925
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33336013 cagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 33335925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 28155640 - 28155557
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaat 122  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  28155640 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaat 28155557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 6438515 - 6438601
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  6438515 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 6438601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 14737647 - 14737560
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  14737647 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 14737560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 22010768 - 22010686
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22010768 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 22010686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 11856988 - 11857070
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11856988 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 11857070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 5674853 - 5674770
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  5674853 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 5674770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 14742507 - 14742420
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  14742507 cagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 14742420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 28184519 - 28184598
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaa 118  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  28184519 cagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggttacaa 28184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 5757553 - 5757478
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  5757553 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 5757478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 22963734 - 22963797
Alignment:
Q  60 aatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  22963734 aatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 22963797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 23824659 - 23824596
Alignment:
Q  60 aatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  23824659 aatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 5572316 - 5572240
Alignment:
Q  48 ccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||| |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  5572316 ccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 5572240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 21356058 - 21356133
Alignment:
Q  48 ccaatgtggcctaatctgg-ggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||| ||||||||||||||||||||||| |||| |||| ||||||| ||  ||||||||||    
T  21356058 ccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaagagttacaagaa 21356133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 10077240 - 10077176
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaa 110  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||    
T  10077240 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 22709058 - 22709102
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||    
T  22709058 ggggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 2785389 - 2785477
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2785389 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 2785477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 31397064 - 31396976
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31397064 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 31396976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 28807643 - 28807557
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28807643 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagaatctag 28807557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 37556693 - 37556606
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  37556693 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctag 37556606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 37561515 - 37561428
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  37561515 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatctag 37561428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 31401921 - 31401833
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31401921 cagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 31401833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 33768193 - 33768281
Alignment:
Q  40 cagttcagccaatgtggcctaatctggggag-agagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33768193 cagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 33768281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 33791330 - 33791418
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33791330 cagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 33791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 1457233 - 1457151
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  1457233 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 1457151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 30631419 - 30631502
Alignment:
Q  39 tcagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  30631419 tcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 30631502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 43592293 - 43592375
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43592293 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 43592375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 43598738 - 43598820
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43598738 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 43598820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 43604230 - 43604312
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43604230 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 43604312  T

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Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 43609722 - 43609804
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  43609722 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 43609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 15044700 - 15044787
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  15044700 cagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 15044787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 27449828 - 27449910
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27449828 cagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 27449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 31180228 - 31180310
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  31180228 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 31180310  T

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Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 27444984 - 27445066
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27444984 cagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 27445066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 38192187 - 38192270
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  38192187 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 38192270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 38219412 - 38219495
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  38219412 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 38219495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 35387679 - 35387759
Alignment:
Q  43 ttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| | |||| |||| |||||||||| |||||||||||    
T  35387679 ttcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaa 35387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 24135862 - 24135945
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||| || || | |||| |||||||||| |||||||||||    
T  24135862 cagttcagccaatatggcctaatctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaa 24135945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 9353407 - 9353332
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  9353407 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 9353332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 36932425 - 36932350
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36932425 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36932350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 10281791 - 10281849
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  10281791 ggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 15464572 - 15464629
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  15464572 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 15464629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 3880321 - 3880397
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || ||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  3880321 ccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 3880397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 11917029 - 11916971
Alignment:
Q  65 ggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||||||||| |||  |||| |||||||||||| ||||||||||    
T  11917029 ggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa 11916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 12084241 - 12084175
Alignment:
Q  57 cctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  12084241 cctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 12084175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 19588787 - 19588844
Alignment:
Q  66 gggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  19588787 gggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 19588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 2673002 - 2672914
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2673002 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 2672914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 2677158 - 2677070
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2677158 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 2677070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 8512231 - 8512319
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8512231 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 8512319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 8517111 - 8517199
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8517111 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 8517199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 18656449 - 18656536
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  18656449 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 18656536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 32475499 - 32475585
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  32475499 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctag 32475585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 32480357 - 32480443
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  32480357 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatctag 32480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 22173266 - 22173184
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22173266 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 22173184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 28503947 - 28503865
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggga-gagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28503947 cagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 28503865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 24968121 - 24968209
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    |||||||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24968121 cagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 24968209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 2671669 - 2671586
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  2671669 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 2671586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 7167258 - 7167341
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  7167258 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 7167341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 8477376 - 8477459
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  8477376 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 8477459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 8739146 - 8739063
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  8739146 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 8739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 9091384 - 9091301
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  9091384 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 9091301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 40372878 - 40372795
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  40372878 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 40372795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 28501750 - 28501698
Alignment:
Q  69 agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 28501698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 1305962 - 1306045
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||||| || | |||| |||||||||| |||||||||||    
T  1305962 cagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagtgttacaaagggttacaagaa 1306045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 26928674 - 26928591
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| || |||||||||||| |||||||| |||||||||||| |||| |||| |||||||||| |||||||||||    
T  26928674 cagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaa 26928591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 32143343 - 32143418
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  32143343 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 32143418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 27452998 - 27453055
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  27452998 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 27453055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 8370551 - 8370476
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  8370551 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 8370476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 16264372 - 16264447
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  16264372 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 16264447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 27975017 - 27974942
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  27975017 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 27974942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 40844674 - 40844749
Alignment:
Q  48 ccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||||||||||||| ||| |||||| |||| |||| |||||||||||| ||||||||||    
T  40844674 ccaatatgacctaatctggggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaa 40844749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 6794760 - 6794703
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  6794760 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 6794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 1736370 - 1736294
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  1736370 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 1736294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 18552948 - 18552872
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  18552948 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 18552872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 36029115 - 36029191
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| ||| ||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  36029115 ccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 36029191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 48438236 - 48438312
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  48438236 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 48438312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 21711245 - 21711320
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||||||| |||||| |||| |||| ||||||||||  ||||||||||    
T  21711245 ccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaagaa 21711320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 27986511 - 27986449
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  27986511 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 33386731 - 33386669
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||    
T  33386731 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 3716067 - 3715991
Alignment:
Q  48 ccaatgtggcctaatctggg-gagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||| || |||||||||||||||||||| | |||| |||| |||||||||||| ||||||||||    
T  3716067 ccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaa 3715991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 10207948 - 10207976
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg 68  Q
    |||||||||||||||||||||||||||||    
T  10207948 cagttcagccaatgtggcctaatctgggg 10207976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 30709855 - 30709779
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| ||||  ||||||||||| ||||||||||    
T  30709855 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaa 30709779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 40592847 - 40592771
Alignment:
Q  48 ccaatgtggcctaatctg-gggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || ||||||||| ||||||||| |||||||||||| | |||| |||| |||||||||||| ||||||||||    
T  40592847 ccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaa 40592771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 19344435 - 19344523
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19344435 cagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 19344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 19349293 - 19349381
Alignment:
Q  40 cagttcagccaatgtggcctaatct-ggggagagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19349293 cagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 19349381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 39812059 - 39811972
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  39812059 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 39811972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 44312695 - 44312613
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  44312695 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 44312613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 32246804 - 32246889
Alignment:
Q  42 gttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  32246804 gttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 32246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 11099010 - 11098927
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  11099010 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 11098927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 14291502 - 14291585
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  14291502 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 14291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 3491764 - 3491847
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  3491764 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 3491847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 9296484 - 9296401
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  9296484 cagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 9296401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 25403646 - 25403730
Alignment:
Q  39 tcagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  25403646 tcagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 25403730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 25398509 - 25398592
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  25398509 cagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 25398592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 21629957 - 21630041
Alignment:
Q  40 cagttcag-ccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  21629957 cagttcagtccaatatgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 21630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 40738857 - 40738926
Alignment:
Q  40 cagttcagccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||| |||| |||| |||||||||    
T  40738857 cagttcagccaatatgacctaatctggggggagagcagctctccaatccactatgatgaaagtgttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 25407653 - 25407719
Alignment:
Q  57 cctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  25407653 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 25407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 13569350 - 13569426
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  13569350 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 13569426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 8040073 - 8040147
Alignment:
Q  40 cagttcag-ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    |||||||| ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||    
T  8040073 cagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 28259234 - 28259177
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  28259234 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 28259177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 10445519 - 10445443
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaata-tgtgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  10445519 ccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaa 10445443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 34388880 - 34388956
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||| |||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  34388880 ccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 34388956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 8390207 - 8390149
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| |||||| ||||| ||||||||||    
T  8390207 ggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaa 8390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 34682391 - 34682333
Alignment:
Q  65 ggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||||||||| |||  |||| |||||||||||| ||||||||||    
T  34682391 ggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa 34682333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 20522242 - 20522318
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaa-ggttacaagaa 121  Q
    ||||| || |||||||||||| |||||||| | |||||||||| |||| |||| ||||||||||| |||||||||||    
T  20522242 ccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaa 20522318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 31056075 - 31056131
Alignment:
Q  57 cctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    |||||||| ||||||||||||||||||||||||| || | |||| ||||||||||||    
T  31056075 cctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 43988535 - 43988447
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43988535 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 43988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 25445160 - 25445073
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  25445160 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 25445073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 39445514 - 39445600
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39445514 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 39445600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 44023944 - 44023858
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  44023944 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 44023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 1055082 - 1054996
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1055082 cagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 1054996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 41390599 - 41390682
Alignment:
Q  44 tcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  41390599 tcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 41390682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 41398254 - 41398337
Alignment:
Q  44 tcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  41398254 tcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 41398337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 24787447 - 24787365
Alignment:
Q  40 cagttcagccaatgtggcctaatctggggag-agagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  24787447 cagttcagccaatatggcctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaa 24787365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 24202852 - 24202769
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  24202852 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 24202769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 19358926 - 19358843
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||| |||| || |||||| ||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  19358926 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 19358843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 19361515 - 19361432
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||| |||| || |||||| ||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  19361515 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 19361432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 19380155 - 19380072
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||| |||| || |||||| ||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  19380155 cagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 19380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 26644972 - 26644897
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  26644972 ccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaagagttacaagaa 26644897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 27104438 - 27104371
Alignment:
Q  57 cctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  27104438 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 27104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 47704011 - 47703946
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||    
T  47704011 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 16124591 - 16124515
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  16124591 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 19072950 - 19073026
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  19072950 ccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 19120840 - 19120916
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  19120840 ccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19120916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 3281730 - 3281805
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||||||||||||||  ||| |||| ||||||||||  ||||||||||    
T  3281730 ccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaa 3281805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 21536635 - 21536569
Alignment:
Q  57 cctaatctgggg-agagagcagctctccaatccaatat-gtgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||||||| ||||||||||||||||||||| |||  |||| ||||||||||  ||||||||||    
T  21536635 cctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagagttacaagaa 21536569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 9476283 - 9476348
Alignment:
Q  48 ccaatgtggcctaatct-ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    ||||| || |||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||    
T  9476283 ccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 13604680 - 13604623
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| ||||  |||||||||  ||||||||||    
T  13604680 ggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa 13604623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 29651833 - 29651898
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| ||||||||||||    
T  29651833 ccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 2322 - 2234
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2322 cagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 149027 - 148939
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaag-gttacaagaatctag 126  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  149027 cagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatctag 148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 3814038 - 3814125
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  3814038 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactctag 3814125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 5732679 - 5732766
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  5732679 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 5732766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 18855741 - 18855827
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  18855741 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 18855827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 56146782 - 56146700
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  56146782 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 56146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 45357367 - 45357280
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  45357367 cagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 45357280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 9224478 - 9224396
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  9224478 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa 9224396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 9229265 - 9229183
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  9229265 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa 9229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 51520471 - 51520553
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  51520471 cagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaa 51520553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 45347888 - 45347807
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaaga 120  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  45347888 cagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga 45347807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 24741954 - 24742037
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  24741954 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 24742037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 29760655 - 29760738
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  29760655 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaa 29760738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 31985708 - 31985634
Alignment:
Q  48 ccaatgtggcctaatctggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  31985708 ccaatatgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 31985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 28468612 - 28468542
Alignment:
Q  40 cagttcagccaatgtggcctaatctgg-ggagagagcagctctccaatccaatatg-tgaatgtgttacaa 108  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||||||| |||| |||| |||||||||    
T  28468612 cagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 16623359 - 16623292
Alignment:
Q  57 cctaatctgg-ggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||||| ||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  16623359 cctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 36315304 - 36315229
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36315304 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36315229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 36329513 - 36329438
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  36329513 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 36329438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 10047401 - 10047477
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  10047401 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 39246016 - 39246092
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||| || |||||||||||| |||||||||| |||||||||| |||| |||| |||||||||||| ||||||||||    
T  39246016 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 39246092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 5396746 - 5396671
Alignment:
Q  48 ccaatgtggcctaatctgg-ggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||| ||||||||||||||||||||||| |||| |||| ||||| ||||  ||||||||||    
T  5396746 ccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaa 5396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 24333849 - 24333896
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag 111  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  24333849 ggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 38152496 - 38152449
Alignment:
Q  65 ggggagagagcagctctccaatccaatat-gtgaatgtgttacaaaag 111  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  38152496 ggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 16630744 - 16630679
Alignment:
Q  59 taatctgg-ggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    |||||||| ||||||| ||||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  16630744 taatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16630679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 5143281 - 5143345
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaa 110  Q
    ||||| || |||||||||||| ||||||||||||||||| ||| |||| |||| |||||||||||    
T  5143281 ccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 377 - 463
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  377 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactctag 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 9713 - 9626
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaatctag 126  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  9713 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactctag 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 35133 - 35051
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  35133 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaa 35051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 182035 - 181973
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatgtgaatgt 101  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  182035 cagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt 181973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 18035 - 17952
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  18035 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 17952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 24128 - 24045
Alignment:
Q  40 cagttcagccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  24128 cagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaa 24045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 8494 - 8419
Alignment:
Q  48 ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||| || |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  8494 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 8419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 44018 - 43961
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||  ||||||||||    
T  44018 ggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaa 43961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 10769 - 10827
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaag-gttacaagaa 121  Q
    ||||||||||||||||||||||||| || | |||| |||||||||||| ||||||||||    
T  10769 ggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 133337 - 133280
Alignment:
Q  65 ggggagagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    ||||||||||||||||||||||||| |||| ||||  |||||||||  ||||||||||    
T  133337 ggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaa 133280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 85696 - 85780
Alignment:
Q  40 cagttcag-ccaatgtggcctaatctgggg-agagagcagctctccaatccaatatg-tgaatgtgttacaaaaggttacaagaa 121  Q
    |||||||| ||||| || |||||||||||| ||||||| |||||||||||||  ||| |||| ||||||||||  ||||||||||    
T  85696 cagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaagaa 85780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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