View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0925_low_35 (Length: 463)

Name: NF0925_low_35
Description: NF0925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0925_low_35
NF0925_low_35
[»] chr1 (38 HSPs)
chr1 (56-346)||(29462645-29462937)
chr1 (344-463)||(50970707-50970826)
chr1 (350-463)||(21856472-21856585)
chr1 (345-463)||(5963007-5963125)
chr1 (345-463)||(15646624-15646742)
chr1 (350-463)||(8678544-8678657)
chr1 (350-463)||(17433644-17433757)
chr1 (350-460)||(4636403-4636513)
chr1 (345-463)||(39154449-39154567)
chr1 (350-463)||(17433219-17433332)
chr1 (350-463)||(18984122-18984235)
chr1 (350-463)||(26859062-26859175)
chr1 (350-463)||(29306956-29307069)
chr1 (350-463)||(29307371-29307484)
chr1 (350-463)||(29870048-29870161)
chr1 (343-463)||(5540247-5540367)
chr1 (345-463)||(18984548-18984666)
chr1 (345-463)||(29869618-29869736)
chr1 (350-463)||(5539819-5539932)
chr1 (350-463)||(9018976-9019089)
chr1 (350-463)||(15646195-15646308)
chr1 (350-463)||(33144348-33144461)
chr1 (350-463)||(39154022-39154135)
chr1 (350-463)||(50970281-50970394)
chr1 (350-462)||(21856045-21856157)
chr1 (350-463)||(8678970-8679083)
chr1 (350-463)||(9019392-9019505)
chr1 (346-463)||(15173095-15173212)
chr1 (350-463)||(15173523-15173635)
chr1 (350-463)||(26859488-26859601)
chr1 (355-463)||(33143925-33144033)
chr1 (350-463)||(5962581-5962694)
chr1 (345-463)||(52268288-52268406)
chr1 (350-433)||(2733416-2733499)
chr1 (7-47)||(46424154-46424194)
chr1 (350-422)||(47826967-47827039)
chr1 (407-455)||(4636033-4636080)
chr1 (189-345)||(5877788-5877943)
[»] chr8 (29 HSPs)
chr8 (345-463)||(33328156-33328274)
chr8 (344-463)||(13225068-13225187)
chr8 (350-456)||(9178071-9178177)
chr8 (350-463)||(31133223-31133336)
chr8 (350-463)||(41681137-41681250)
chr8 (350-463)||(9928912-9929025)
chr8 (350-463)||(11656458-11656571)
chr8 (350-463)||(19176719-19176832)
chr8 (350-459)||(31133653-31133762)
chr8 (350-463)||(34540977-34541090)
chr8 (350-463)||(41681563-41681676)
chr8 (347-463)||(12572280-12572396)
chr8 (350-460)||(19176293-19176403)
chr8 (344-463)||(9930086-9930205)
chr8 (344-463)||(11656886-11657005)
chr8 (350-460)||(33328572-33328682)
chr8 (345-463)||(44831245-44831363)
chr8 (350-462)||(12571866-12571978)
chr8 (350-463)||(33742925-33743037)
chr8 (351-463)||(13224645-13224756)
chr8 (350-459)||(4629800-4629909)
chr8 (350-463)||(44831674-44831787)
chr8 (400-463)||(33743348-33743411)
chr8 (345-459)||(8073985-8074098)
chr8 (350-455)||(11336959-11337064)
chr8 (216-334)||(26159175-26159294)
chr8 (346-456)||(10918125-10918235)
chr8 (348-433)||(4630245-4630330)
chr8 (426-463)||(43958264-43958301)
[»] chr3 (50 HSPs)
chr3 (347-463)||(41046700-41046816)
chr3 (343-463)||(20840990-20841110)
chr3 (350-463)||(17464494-17464607)
chr3 (343-463)||(32534955-32535075)
chr3 (341-463)||(5136974-5137096)
chr3 (350-463)||(20840563-20840676)
chr3 (350-463)||(43973444-43973557)
chr3 (343-463)||(37726925-37727045)
chr3 (345-463)||(27393659-27393777)
chr3 (350-460)||(31779084-31779194)
chr3 (350-463)||(4275793-4275906)
chr3 (350-463)||(24300985-24301098)
chr3 (344-463)||(39555575-39555694)
chr3 (345-463)||(30098192-30098310)
chr3 (353-463)||(48452995-48453105)
chr3 (350-463)||(22424817-22424930)
chr3 (350-463)||(25853237-25853350)
chr3 (350-463)||(37727359-37727472)
chr3 (350-463)||(39556006-39556119)
chr3 (350-463)||(43973869-43973982)
chr3 (343-463)||(23644458-23644578)
chr3 (350-463)||(25853656-25853769)
chr3 (350-459)||(29801359-29801468)
chr3 (350-463)||(30104485-30104598)
chr3 (351-463)||(22425242-22425354)
chr3 (344-463)||(31778650-31778769)
chr3 (345-463)||(27394006-27394124)
chr3 (350-460)||(29801848-29801958)
chr3 (350-463)||(32535387-32535505)
chr3 (342-459)||(26274562-26274679)
chr3 (346-463)||(26837359-26837476)
chr3 (350-463)||(26837785-26837897)
chr3 (350-463)||(51474763-51474876)
chr3 (347-463)||(25612406-25612522)
chr3 (350-463)||(23228437-23228549)
chr3 (350-463)||(23644894-23645007)
chr3 (343-460)||(24300553-24300669)
chr3 (350-462)||(5137411-5137523)
chr3 (350-463)||(50116838-50116951)
chr3 (350-461)||(51473431-51473542)
chr3 (345-455)||(17464929-17465039)
chr3 (346-463)||(26274996-26275112)
chr3 (350-463)||(32697129-32697242)
chr3 (350-458)||(45965941-45966049)
chr3 (350-433)||(37222030-37222113)
chr3 (344-463)||(41047128-41047245)
chr3 (350-459)||(25420574-25420683)
chr3 (348-461)||(32695704-32695817)
chr3 (350-463)||(37220560-37220673)
chr3 (405-461)||(18010176-18010232)
[»] chr7 (26 HSPs)
chr7 (344-463)||(37786764-37786883)
chr7 (346-463)||(19830419-19830536)
chr7 (350-463)||(19590954-19591067)
chr7 (350-463)||(34534220-34534333)
chr7 (350-463)||(19590528-19590641)
chr7 (360-463)||(29099863-29099966)
chr7 (345-463)||(4641438-4641556)
chr7 (350-463)||(23952733-23952847)
chr7 (350-463)||(32004617-32004730)
chr7 (350-463)||(38859070-38859183)
chr7 (350-463)||(32005043-32005156)
chr7 (350-463)||(35288906-35289019)
chr7 (350-459)||(35289334-35289443)
chr7 (343-463)||(29100280-29100400)
chr7 (344-455)||(19830856-19830967)
chr7 (350-459)||(2658842-2658951)
chr7 (350-463)||(2659269-2659382)
chr7 (350-463)||(34533794-34533907)
chr7 (350-463)||(37787196-37787309)
chr7 (344-463)||(38858640-38858759)
chr7 (350-463)||(38160954-38161067)
chr7 (350-463)||(4641873-4641983)
chr7 (353-459)||(23953162-23953268)
chr7 (346-459)||(4478133-4478246)
chr7 (350-463)||(28583442-28583555)
chr7 (350-459)||(28584355-28584464)
[»] scaffold0417 (2 HSPs)
scaffold0417 (350-463)||(11052-11165)
scaffold0417 (368-463)||(10642-10737)
[»] chr4 (53 HSPs)
chr4 (341-463)||(12234758-12234880)
chr4 (346-462)||(54995498-54995613)
chr4 (350-463)||(20470940-20471053)
chr4 (350-463)||(23494872-23494985)
chr4 (350-463)||(45082853-45082966)
chr4 (345-460)||(18751597-18751712)
chr4 (346-463)||(4219988-4220105)
chr4 (350-463)||(11153576-11153689)
chr4 (350-463)||(25447250-25447363)
chr4 (343-463)||(22170366-22170485)
chr4 (350-461)||(18763951-18764062)
chr4 (344-463)||(48526610-48526729)
chr4 (345-463)||(15523663-15523781)
chr4 (350-463)||(12234332-12234445)
chr4 (350-463)||(15523238-15523351)
chr4 (350-463)||(22434182-22434295)
chr4 (350-463)||(25447665-25447778)
chr4 (350-463)||(33109893-33110006)
chr4 (350-463)||(38962248-38962361)
chr4 (350-463)||(46193408-46193521)
chr4 (350-463)||(46193834-46193947)
chr4 (350-463)||(48526199-48526312)
chr4 (346-463)||(54995068-54995185)
chr4 (350-463)||(2118296-2118409)
chr4 (350-463)||(4219560-4219673)
chr4 (346-463)||(22434606-22434722)
chr4 (350-463)||(33109687-33109800)
chr4 (343-463)||(11153142-11153262)
chr4 (344-463)||(2118724-2118843)
chr4 (350-461)||(25937673-25937784)
chr4 (344-463)||(25938100-25938219)
chr4 (350-463)||(23494446-23494559)
chr4 (350-463)||(51020800-51020913)
chr4 (350-463)||(51021225-51021337)
chr4 (344-463)||(16690933-16691052)
chr4 (346-461)||(48713777-48713892)
chr4 (350-463)||(44892577-44892690)
chr4 (346-463)||(45082431-45082547)
chr4 (368-463)||(12503457-12503552)
chr4 (341-456)||(44890511-44890626)
chr4 (350-461)||(48293597-48293708)
chr4 (350-453)||(48708298-48708401)
chr4 (350-463)||(35363029-35363143)
chr4 (368-463)||(43243709-43243804)
chr4 (350-455)||(20958296-20958401)
chr4 (402-463)||(43242325-43242386)
chr4 (416-459)||(12503869-12503912)
chr4 (368-463)||(43281220-43281314)
chr4 (350-456)||(48294979-48295085)
chr4 (345-414)||(16318254-16318323)
chr4 (7-47)||(9452967-9453007)
chr4 (350-459)||(16691505-16691613)
chr4 (354-459)||(20957196-20957301)
[»] scaffold0295 (2 HSPs)
scaffold0295 (350-463)||(4796-4909)
scaffold0295 (350-461)||(5222-5333)
[»] chr6 (33 HSPs)
chr6 (350-463)||(11445416-11445529)
chr6 (345-463)||(15828070-15828188)
chr6 (350-463)||(2319675-2319788)
chr6 (350-463)||(10900359-10900472)
chr6 (350-463)||(12935160-12935273)
chr6 (350-463)||(23075557-23075670)
chr6 (348-463)||(18504920-18505035)
chr6 (349-463)||(10899941-10900055)
chr6 (350-463)||(18505348-18505461)
chr6 (350-463)||(20741103-20741216)
chr6 (350-463)||(22219782-22219895)
chr6 (348-463)||(2322647-2322762)
chr6 (350-463)||(11277011-11277124)
chr6 (350-463)||(12935586-12935699)
chr6 (350-459)||(18257140-18257249)
chr6 (344-463)||(20741530-20741652)
chr6 (350-456)||(4811692-4811798)
chr6 (350-463)||(1149861-1149974)
chr6 (350-463)||(18257566-18257679)
chr6 (350-463)||(31470745-31470858)
chr6 (345-463)||(31470313-31470431)
chr6 (350-463)||(11444990-11445103)
chr6 (350-463)||(28472640-28472753)
chr6 (350-463)||(29859829-29859942)
chr6 (350-463)||(15827641-15827756)
chr6 (345-444)||(23073997-23074096)
chr6 (345-463)||(3835155-3835273)
chr6 (350-459)||(4811375-4811484)
chr6 (342-463)||(11276585-11276706)
chr6 (350-433)||(1149468-1149551)
chr6 (350-460)||(29035069-29035179)
chr6 (350-463)||(18296148-18296261)
chr6 (350-463)||(29033437-29033550)
[»] chr5 (41 HSPs)
chr5 (350-463)||(2864757-2864870)
chr5 (346-463)||(18182969-18183086)
chr5 (335-459)||(5818917-5819041)
chr5 (350-459)||(8647871-8647980)
chr5 (350-459)||(14215676-14215785)
chr5 (346-455)||(15372310-15372419)
chr5 (350-463)||(18183398-18183511)
chr5 (350-463)||(2865184-2865297)
chr5 (350-463)||(5819358-5819471)
chr5 (350-463)||(8647441-8647554)
chr5 (350-463)||(19359565-19359678)
chr5 (350-463)||(24362265-24362378)
chr5 (350-463)||(15708974-15709087)
chr5 (350-463)||(19359139-19359252)
chr5 (345-459)||(8461364-8461478)
chr5 (353-463)||(24361843-24361953)
chr5 (345-463)||(29455171-29455289)
chr5 (344-463)||(16018586-16018704)
chr5 (350-462)||(24331562-24331676)
chr5 (353-463)||(24325218-24325328)
chr5 (350-463)||(164194-164306)
chr5 (350-463)||(14215244-14215357)
chr5 (345-463)||(29454738-29454856)
chr5 (350-463)||(4219666-4219779)
chr5 (350-459)||(8460933-8461042)
chr5 (350-463)||(14463949-14464062)
chr5 (343-460)||(25000521-25000638)
chr5 (390-463)||(164620-164693)
chr5 (350-463)||(4222151-4222264)
chr5 (350-460)||(15371874-15371983)
chr5 (350-463)||(4623151-4623264)
chr5 (350-463)||(6018317-6018429)
chr5 (350-463)||(7349446-7349559)
chr5 (350-463)||(15709398-15709510)
chr5 (346-463)||(16019016-16019133)
chr5 (350-463)||(24331989-24332106)
chr5 (368-463)||(4624654-4624749)
chr5 (189-238)||(37511204-37511253)
chr5 (387-463)||(6019199-6019276)
chr5 (350-463)||(7348562-7348675)
chr5 (309-347)||(15079021-15079059)
[»] chr2 (38 HSPs)
chr2 (350-463)||(22374323-22374436)
chr2 (339-463)||(11090513-11090637)
chr2 (350-463)||(40815348-40815461)
chr2 (346-463)||(40815774-40815891)
chr2 (344-463)||(40027569-40027688)
chr2 (345-463)||(40027138-40027256)
chr2 (346-463)||(3025465-3025582)
chr2 (350-463)||(22374754-22374867)
chr2 (350-463)||(26538508-26538621)
chr2 (350-463)||(28616616-28616729)
chr2 (350-462)||(11090950-11091062)
chr2 (347-463)||(14432142-14432258)
chr2 (350-463)||(239356-239468)
chr2 (350-463)||(7446775-7446888)
chr2 (350-463)||(18451260-18451373)
chr2 (344-463)||(20444746-20444865)
chr2 (345-463)||(18450828-18450946)
chr2 (345-463)||(26538095-26538213)
chr2 (350-463)||(28847124-28847237)
chr2 (350-463)||(43058336-43058449)
chr2 (350-462)||(35781093-35781205)
chr2 (350-461)||(1978111-1978222)
chr2 (345-459)||(28617047-28617161)
chr2 (350-463)||(1978538-1978651)
chr2 (350-462)||(20440461-20440573)
chr2 (349-463)||(8425357-8425470)
chr2 (349-459)||(8425793-8425903)
chr2 (350-460)||(15551502-15551612)
chr2 (354-459)||(239785-239890)
chr2 (350-463)||(35779711-35779824)
chr2 (350-463)||(43058762-43058874)
chr2 (350-463)||(14432570-14432683)
chr2 (71-157)||(9363209-9363293)
chr2 (345-459)||(7446340-7446454)
chr2 (350-463)||(3025892-3026003)
chr2 (350-463)||(8972240-8972353)
chr2 (350-463)||(15552483-15552595)
chr2 (346-422)||(20495192-20495268)
[»] scaffold0951 (2 HSPs)
scaffold0951 (350-463)||(2096-2209)
scaffold0951 (350-463)||(1670-1783)
[»] scaffold0113 (1 HSPs)
scaffold0113 (342-461)||(28674-28793)
[»] scaffold0027 (2 HSPs)
scaffold0027 (345-455)||(42167-42277)
scaffold0027 (350-463)||(42587-42700)
[»] scaffold0007 (2 HSPs)
scaffold0007 (345-459)||(64300-64414)
scaffold0007 (344-462)||(64735-64853)
[»] scaffold1585 (1 HSPs)
scaffold1585 (350-459)||(570-679)
[»] scaffold1223 (2 HSPs)
scaffold1223 (350-463)||(1170-1283)
scaffold1223 (350-463)||(756-868)
[»] scaffold0432 (2 HSPs)
scaffold0432 (350-463)||(10301-10414)
scaffold0432 (343-454)||(9928-10039)
[»] scaffold0273 (2 HSPs)
scaffold0273 (350-463)||(4636-4749)
scaffold0273 (387-463)||(4243-4319)
[»] scaffold0019 (1 HSPs)
scaffold0019 (350-463)||(134102-134215)
[»] scaffold0176 (2 HSPs)
scaffold0176 (344-463)||(18832-18951)
scaffold0176 (350-444)||(19069-19163)
[»] scaffold0076 (1 HSPs)
scaffold0076 (340-450)||(8451-8561)
[»] scaffold0157 (2 HSPs)
scaffold0157 (368-463)||(16925-17020)
scaffold0157 (416-459)||(16565-16608)
[»] scaffold1696 (1 HSPs)
scaffold1696 (351-463)||(454-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (405-463)||(7717-7775)
[»] scaffold0057 (1 HSPs)
scaffold0057 (348-463)||(61887-62002)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 56 - 346
Target Start/End: Original strand, 29462645 - 29462937
Alignment:
Q  56 tttgtcgttttgaggtaacaaagtgttgaaaaatggcctatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatg 155  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29462645 tttgtcgttttgaggtaacaaagtgttgaaaa-tggcctatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatg 29462743  T
Q  156 tacgcaannnnnnnnn---atgaaaataaatttaacactcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacaaggtggcta 252  Q
    ||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29462744 tacgcatttttttttttttatgaaaataaatttaacactcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacatggtggcta 29462843  T
Q  253 gcataagaattggcctccctagcgaagctatgagcaaccatatgctcttgtctgtaaataaactttacctcaaagttacattacaaatttaaaa 346  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  29462844 gcataagaattggcctccctagcgaagctatgagcaaccatatgctcttgtctgcaaataaactttacttcaaagttacattgcaaatttaaaa 29462937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 50970826 - 50970707
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||    
T  50970826 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 50970727  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  50970726 tgttgcatttttcgtcctac 50970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 21856585 - 21856472
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | | |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  21856485 atttttcgtcctac 21856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 5963125 - 5963007
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | |||||||| ||| ||||| |||| |||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcattttt 5963026  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  5963025 gttgcatttttcgtcctac 5963007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 15646742 - 15646624
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | |||||||||||| | || |||||||||| |||||||||||||||||| |||| |||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  15646642 gttgcatttttcgtcctac 15646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 8678544 - 8678657
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  8678644 atttttcgtcctac 8678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 17433757 - 17433644
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||| || |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  17433657 atttttcgtcctac 17433644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 4636513 - 4636403
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  4636413 atttttcgtcc 4636403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 39154567 - 39154449
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| |||||||||| |||| |||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  39154467 gttgcatttttcgtcctac 39154449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 17433219 - 17433332
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| |||| | | |||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  17433319 atttttcatcctac 17433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 18984122 - 18984235
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  18984222 atttttcgtcctac 18984235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 26859062 - 26859175
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  26859162 atttttcgtcctac 26859175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 29306956 - 29307069
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||| | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  29307056 atttttcgtcctac 29307069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 29307484 - 29307371
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||| |||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  29307384 atttttcgtcctac 29307371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 29870161 - 29870048
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  29870061 atttttcgtcctac 29870048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 5540367 - 5540247
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || ||||||||||||||| |||| |||    
T  5540367 aaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattt 5540268  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  5540267 ttgttgcatttttcgtcctac 5540247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 18984666 - 18984548
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984567  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  18984566 gttgcatttttcgtcctac 18984548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 29869618 - 29869736
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  |||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattttt 29869717  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  29869718 gttgcatttttcgtcctac 29869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 5539819 - 5539932
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  5539919 atttttcgtcctac 5539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 9018976 - 9019089
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  9019076 atttttcgtcctac 9019089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 15646195 - 15646308
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| ||||||| ||| |||||| |||| ||||||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  15646295 atttttcgtcctac 15646308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 33144461 - 33144348
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| || ||||||| |||| ||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  33144361 atttttcgtcctac 33144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 39154022 - 39154135
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  || ||||||| | || | ||||||||||||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  39154122 atttttcgtcctac 39154135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 50970281 - 50970394
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || |||||||||||||||||| |||| ||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  50970381 atttttcgtcctac 50970394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 21856045 - 21856157
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  450 atttttcgtccta 462  Q
    ||||||| |||||    
T  21856145 atttttcatccta 21856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 8679083 - 8678970
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  8678983 atttttcgtcctac 8678970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 9019505 - 9019392
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  9019405 atttttcgtcctac 9019392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 15173095 - 15173212
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| ||||||||   ||||||||||| |||||| |||| ||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  15173195 ttgcatttttcgtcctac 15173212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 15173635 - 15173523
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | || |||||| || |||||||| |||||| ||||||| |||||||||| |||| ||||||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcctttt-aaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  15173536 atttttcgtcctac 15173523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 26859601 - 26859488
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | |||||||||||  ||| | |||||||| ||| |||| |||||||||| ||||| |||||||||||| |||| ||||||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  26859501 atttttcgtcctac 26859488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 463
Target Start/End: Original strand, 33143925 - 33144033
Alignment:
Q  355 tacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttt 454  Q
    |||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  455 tcgtcctac 463  Q
    |||||||||    
T  33144025 tcgtcctac 33144033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 5962581 - 5962694
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| |||||||| ||  ||||| ||||||||| ||  ||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgc 5962680  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  5962681 atttttcgttctac 5962694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 52268288 - 52268406
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| |||||||| ||| ||||  |||| |||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||| ||||||||||||    
T  52268388 gttgcacttttcgtcctac 52268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 2733499 - 2733416
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 433  Q
    ||||||| ||||||||| || |||||||| ||||||  ||||| || || |||| |||||||||| ||||||||||||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 46424154 - 46424194
Alignment:
Q  7 tatatttaatgaattcaccgcttcatcttaaaagagcaaca 47  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  46424154 tatatttaatgaattcatcgcttcatcttaaaagagcaaca 46424194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 422
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 422  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || ||||||| |||||||| |||||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 4636033 - 4636080
Alignment:
Q  407 ttaaaacataacaaaacggtccttcaagtatcttttttgttgcattttt 455  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttt 4636080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 345
Target Start/End: Complemental strand, 5877943 - 5877788
Alignment:
Q  189 actcatttcattaatcaatgaagagttaatacaaagaggaacataatcatgaacaaggtggctagcataagaattggcctccctagcgaagctatgagca 288  Q
    ||||||||||||| | ||| | |||  ||||||| | ||||||||||||||||    ||||||||||||| ||||| |  | ||||| || ||||||||     
T  5877943 actcatttcattattaaataacgaggaaatacaagg-ggaacataatcatgaatttagtggctagcataaaaattgacagctctagctaaactatgagct 5877845  T
Q  289 accatatgctcttgtctgtaaataaactttacctcaaagttacattacaaatttaaa 345  Q
    |||| || | |||| ||  | |||||||| | |||||||||||||| ||||| ||||    
T  5877844 accaaattcgcttgcctccatataaacttcatctcaaagttacattgcaaatctaaa 5877788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 33328156 - 33328274
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  33328256 gttgcatttttcgtcctac 33328274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 13225187 - 13225068
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||    
T  13225187 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 13225088  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  13225087 tgttgcatttttcgtcctac 13225068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 9178177 - 9178071
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  450 atttttc 456  Q
    |||||||    
T  9178077 atttttc 9178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 31133223 - 31133336
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||| ||  ||| |||||||||| |||||||| |||||||||||||| ||||||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  31133323 atttttcgtcctac 31133336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 41681137 - 41681250
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  41681237 atttttcgtcctac 41681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 9928912 - 9929025
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  9929012 atttttcgtcctac 9929025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 11656458 - 11656571
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||  |||||||||||||||||| || | ||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11656558 atttttcgtcctac 11656571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 19176832 - 19176719
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||| ||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176733  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  19176732 atttttcgtcctac 19176719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 31133762 - 31133653
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||  ||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  31133662 atttttcgtc 31133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 34541090 - 34540977
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||||||||||| |||||||||| |||| ||||||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  34540990 atttttcgtcctac 34540977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 41681676 - 41681563
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || | || |||||||||| |||||||||||||||||| |||| ||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681577  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  41681576 atttttcgtcctac 41681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 12572396 - 12572280
Alignment:
Q  347 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 446  Q
    |||||||||||||||||||| |||||||||||  ||| | ||||||||  ||||||  |||||||||| |||||||||||||||||| |||| |||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 12572297  T
Q  447 tgcatttttcgtcctac 463  Q
    |||||||||||||||||    
T  12572296 tgcatttttcgtcctac 12572280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 350 - 460
Target Start/End: Original strand, 19176293 - 19176403
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176392  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  19176393 atttttcgtcc 19176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 9930205 - 9930086
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||| | ||||||| |||||||||| |||| ||||    
T  9930205 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttt 9930106  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  9930105 tgttgcatttttcgtcctac 9930086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 11657005 - 11656886
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  | | |||||||||| ||||||| |||||||||| |||| ||||    
T  11657005 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttt 11656906  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  11656905 tgttgcatttttcgtcctac 11656886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 33328682 - 33328572
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| ||||||||||  |||| | ||||||||  ||||||  ||||||||||||||||||||||||||||| |||| ||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  33328582 atttttcgtcc 33328572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 44831245 - 44831363
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||| ||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| | |||| |||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 44831344  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  44831345 gttgcatttttcgtcctac 44831363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 12571866 - 12571978
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  | || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  450 atttttcgtccta 462  Q
    |||||||||||||    
T  12571966 atttttcgtccta 12571978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 33742925 - 33743037
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||| |||||||| ||||| |||| |||||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatgc 33743023  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  33743024 atttttcgtcctac 33743037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 13224645 - 13224756
Alignment:
Q  351 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 450  Q
    ||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||  |||||||| |||| ||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  451 tttttcgtcctac 463  Q
    |||||||||||||    
T  13224744 tttttcgtcctac 13224756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 4629800 - 4629909
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||| |||||||  ||||||||||||| | |||| ||||||||| || |||| |||||||| | |||||||||||| ||||| |||| ||||| ||||    
T  4629800 ttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgc 4629899  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  4629900 atttttcgtc 4629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 44831787 - 44831674
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||  ||||| |||| ||||||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  450 atttttcgtcctac 463  Q
    |||||| |||||||    
T  44831687 atttttggtcctac 44831674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 33743411 - 33743348
Alignment:
Q  400 tgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||||||| |||||||||||  ||||| |||| ||||||||||||||||||||||||    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctac 33743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 8074098 - 8073985
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||| ||| ||||||||| ||||||||||| |||||| |||||| |||||||| | |||||||||| |||||||   |||||||| ||||  ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatc-atttt 8074000  T
Q  445 gttgcatttttcgtc 459  Q
    |||||||||| ||||    
T  8073999 gttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 455
Target Start/End: Complemental strand, 11337064 - 11336959
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| | || | |||||| || ||  ||| |||||||||| || ||||||||| ||||| |||| ||||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgc 11336965  T
Q  450 attttt 455  Q
    ||||||    
T  11336964 attttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 26159294 - 26159175
Alignment:
Q  216 aatacaaagaggaacataatcatgaacaaggtggctagcataagaattggc-ctccctagcgaagctatgagcaaccatatgctcttgtctgtaaataaa 314  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||||||   ||||||| || |||||||| |||| || | |||||||    |||||    
T  26159294 aatacaaggaggaacataatcatgaacttggtggctagaataagaattggcaaaccctagctaaactatgagctaccaaattcgcttgtctccgtataaa 26159195  T
Q  315 ctttacctcaaagttacatt 334  Q
    ||| |||| |||||||||||    
T  26159194 cttcacctaaaagttacatt 26159175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 456
Target Start/End: Original strand, 10918125 - 10918235
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||| |||| || |||||||||||  ||| | |||||| || || |||||  |||||||| | |||||  ||||||||| |||| ||||||    
T  10918125 aggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttg 10918224  T
Q  446 ttgcatttttc 456  Q
    |||||||||||    
T  10918225 ttgcatttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 4630330 - 4630245
Alignment:
Q  348 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 433  Q
    ||||||||||||||||| |  ||||||||||  ||| | |||||| || || ||| ||||||||||| || | |||||||||||||    
T  4630330 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaa 4630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 463
Target Start/End: Original strand, 43958264 - 43958301
Alignment:
Q  426 tccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctac 43958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 41046700 - 41046816
Alignment:
Q  347 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 446  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41046799  T
Q  447 tgcatttttcgtcctac 463  Q
    |||||||||||||||||    
T  41046800 tgcatttttcgtcctac 41046816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 20841110 - 20840990
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| |||||||||||||||||| |||| |||    
T  20841110 aaaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 20841011  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  20841010 ttgttgcatttttcgtcctac 20840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 17464494 - 17464607
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  17464594 atttttcgtcctac 17464607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 32534955 - 32535075
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||||||||||||||||||||| ||||||||||| | || | |||||| || || ||||||||||||||| |||||||||||||||||| |||| |||    
T  32534955 aaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattt 32535054  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  32535055 ttgttgcatttttcgtcctac 32535075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 341 - 463
Target Start/End: Original strand, 5136974 - 5137096
Alignment:
Q  341 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 440  Q
    |||| ||||||||||||||||||||| ||||||||||| || | | |||||| || ||||||| |||||||||| |||||||||||||||||| |||| |    
T  5136974 ttaataggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 5137073  T
Q  441 ttttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||||    
T  5137074 ttttgttgcatttttcgtcctac 5137096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 20840563 - 20840676
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  20840663 atttttcgtcctac 20840676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 43973444 - 43973557
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| |||| ||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  43973544 atttttcgtcctac 43973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 37726925 - 37727045
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||||||||||||| |||||||||||  ||  ||||||||||| |  |||| ||||||||||||||||||||||||||||| |||| |||    
T  37726925 aaaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattt 37727024  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  37727025 ttgttgcatttttcgtcctac 37727045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 27393659 - 27393777
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || |||||| || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 27393758  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  27393759 gttgcatttttcgtcctac 27393777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 31779194 - 31779084
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  31779094 atttttcgtcc 31779084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 4275906 - 4275793
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| ||||||||||||||| || |||| ||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4275806 atttttcgtcctac 4275793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 24301098 - 24300985
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| |||||| ||||||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  24300998 atttttcgtcctac 24300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 39555575 - 39555694
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||    
T  39555575 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttt 39555674  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||| ||||    
T  39555675 tgttgcatttttcgttctac 39555694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 30098310 - 30098192
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattttt 30098211  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  30098210 gttgcatttttcgtcctac 30098192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 48452995 - 48453105
Alignment:
Q  353 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 452  Q
    ||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  453 tttcgtcctac 463  Q
    |||||||||||    
T  48453095 tttcgtcctac 48453105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 22424817 - 22424930
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||||||||||||   |||| ||||||||||| |  || | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22424916  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  22424917 atttttcgtcctac 22424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 25853237 - 25853350
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || ||||||| |||||||| | |||||||||||||||||| |||| ||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 25853336  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  25853337 atttttcgttctac 25853350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 37727472 - 37727359
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  37727372 atttttcgtcctac 37727359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 39556119 - 39556006
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  39556019 atttttcgtcctac 39556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 43973982 - 43973869
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| |  |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  43973882 atttttcgtcctac 43973869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 23644458 - 23644578
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||||||||||||| ||||| ||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| |||    
T  23644458 aaaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattt 23644557  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  23644558 ttgttgcatttttcgtcctac 23644578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 25853769 - 25853656
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | |||||||||||| ||| | ||||||||| || || | |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  25853669 atttttcgtcctac 25853656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 29801359 - 29801468
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| | || | || |||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 29801458  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  29801459 atttttcgtc 29801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 30104485 - 30104598
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| || | ||||||||||||| |||| ||||||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  30104585 atttttcgtcctac 30104598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 351 - 463
Target Start/End: Complemental strand, 22425354 - 22425242
Alignment:
Q  351 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 450  Q
    |||||||||||||||| ||||||||| | |||| | ||||| ||| ||||||| || ||||||| ||||||||||| |||||| |||| |||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  451 tttttcgtcctac 463  Q
    |||||||||||||    
T  22425254 tttttcgtcctac 22425242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 31778650 - 31778769
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| |||||||||||  ||| | | ||||||| || |||| |||||||||| ||||||||||||||||   |||| ||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttt 31778749  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  31778750 tgttgcatttttcgtcctac 31778769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 27394124 - 27394006
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||  | || ||||||||||||||| ||||||||| |||||||| |||| |||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattttt 27394025  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||| | ||||||    
T  27394024 gttgcattttccatcctac 27394006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 29801958 - 29801848
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||| ||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  29801958 ttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29801859  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  29801858 atttttcgtcc 29801848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 32535505 - 32535387
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc-----tttttt 444  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| ||||      |||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  32535405 gttgcatttttcgtcctac 32535387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 26274562 - 26274679
Alignment:
Q  342 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 441  Q
    ||||||||||||||||| ||||| | || || |||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||    
T  26274562 taaaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 26274661  T
Q  442 tttgttgcatttttcgtc 459  Q
    ||||||||||||||||||    
T  26274662 tttgttgcatttttcgtc 26274679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 26837359 - 26837476
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||| ||||||| || || ||||| |||| | |||||| || || |||| ||||| |||||||| |||||||||||||| |||| ||||||    
T  26837359 aggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttg 26837458  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  26837459 ttgcatttttcgtcctac 26837476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 26837897 - 26837785
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| |  |||| ||| |||| | |||||||||||| |||||||||| ||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  450 atttttcgtcctac 463  Q
    |||||| |||||||    
T  26837798 attttttgtcctac 26837785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 51474876 - 51474763
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||||| ||||||||| | || | |||||| || ||||||| ||||||||||||||||||  |||||| |  |||| ||||||||||    
T  51474876 ttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgc 51474777  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  51474776 atttttcgtcctac 51474763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 347 - 463
Target Start/End: Complemental strand, 25612522 - 25612406
Alignment:
Q  347 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 446  Q
    |||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||| | |||||||| ||| || || |||| |||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  447 tgcatttttcgtcctac 463  Q
    |||||||||||||||||    
T  25612422 tgcatttttcgtcctac 25612406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 23228549 - 23228437
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| | ||||||||| |||| | |||||| |||||||||| |||||||||  |||||||  ||||||||| |||| ||||| ||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgc 23228451  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  23228450 atttttcgtcctac 23228437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 23645007 - 23644894
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| ||||||||||| |||| | |||||| || || | || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  23644907 atttttcatcctac 23644894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 343 - 460
Target Start/End: Original strand, 24300553 - 24300669
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||||||||||||| ||||||| ||||||||||| | |||| ||||||||| || || | |||||||||| || |||||||| |||||| |||| |||    
T  24300553 aaaaggtttaattacatttttggt-ctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattt 24300651  T
Q  443 ttgttgcatttttcgtcc 460  Q
    |||||||| |||||||||    
T  24300652 ttgttgcaattttcgtcc 24300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 5137523 - 5137411
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| |  |||| |||||||| | ||||||| |||||||||| |||| ||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 5137424  T
Q  450 atttttcgtccta 462  Q
    |||||| ||||||    
T  5137423 atttttagtccta 5137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 50116951 - 50116838
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| | || | |||||| || ||||||| |||| ||| | |||||||||||| ||||  |||| ||||||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  450 atttttcgtcctac 463  Q
    | ||||||||||||    
T  50116851 aattttcgtcctac 50116838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 461
Target Start/End: Original strand, 51473431 - 51473542
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||||| |||||| || || |||| |||||||||| |||||||  |||||||   |||| ||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T
Q  450 atttttcgtcct 461  Q
    | |||| |||||    
T  51473531 acttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 455
Target Start/End: Complemental strand, 17465039 - 17464929
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||| ||||||| ||||||||||| ||||   | ||||||| ||   || |||||||| | |||||||||||||||||| |||| |||||    
T  17465039 aaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  445 gttgcattttt 455  Q
    |||||||||||    
T  17464939 gttgcattttt 17464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 26275112 - 26274996
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||| | ||||||  || |||||||| |||| | ||||||||| || | || |||||||||| || |||||||||| |||| |||| ||||||    
T  26275112 aggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttg 26275013  T
Q  446 ttgcatttttcgtcctac 463  Q
    |||| |||||||||||||    
T  26275012 ttgc-tttttcgtcctac 26274996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 32697242 - 32697129
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| | ||||||| ||||||||||  |||| | |||||| |  ||| ||| |||||||||| |||||||  || |||||| |||| ||||||||||    
T  32697242 ttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgc 32697143  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  32697142 atttttcgtcctac 32697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 458
Target Start/End: Original strand, 45965941 - 45966049
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | |||||  | ||| |||  ||||||||||||||||||  ||||||| | |||| ||| ||||||    
T  45965941 ttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgc 45966040  T
Q  450 atttttcgt 458  Q
    |||||||||    
T  45966041 atttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 37222113 - 37222030
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 433  Q
    ||||||||||||||||| |||||||||||||||| | || ||| || || |||| |||||||||| ||||||||  ||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 41047245 - 41047128
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||||||||||||||||| |  | || ||||||| |||| | ||||||||| |  || | |||||||||| || |||||| |||||||| |||| ||||    
T  41047245 aaaggtttaattacactttcgtct-tcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttt 41047148  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  41047147 tgttgcatttttcgtcctac 41047128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 25420683 - 25420574
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| |  |||| ||||| |||| | |||||| |||||| ||| |||||||| | || ||||  ||||||||| |||  ||||||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  25420583 atttttcgtc 25420574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 461
Target Start/End: Original strand, 32695704 - 32695817
Alignment:
Q  348 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 447  Q
    ||||||||||| ||||||| ||| | ||||| |||| |||||||| |||| ||| |||||||||||| |||||||  ||||| | | |||  ||||||||    
T  32695704 gtttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgtt 32695803  T
Q  448 gcatttttcgtcct 461  Q
    ||| |||| |||||    
T  32695804 gcaattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 37220560 - 37220673
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||| ||||| |||| | || | |  ||||||||  |||||||||| || ||||  ||||||||  |||| ||||||||||    
T  37220560 ttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgttgc 37220659  T
Q  450 atttttcgtcctac 463  Q
    | ||||||||||||    
T  37220660 acttttcgtcctac 37220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 18010232 - 18010176
Alignment:
Q  405 ttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcct 461  Q
    |||||||||| |||||||  ||  ||||| |||| ||||||||||||||||||||||    
T  18010232 ttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 37786764 - 37786883
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||||||||||||| |||| ||||    
T  37786764 aaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttt 37786863  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  37786864 tgttgcatttttcgtcctac 37786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 19830419 - 19830536
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||    
T  19830419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19830518  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  19830519 ttgcatttttcgtcctac 19830536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 19591067 - 19590954
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  19590967 atttttcgtcctac 19590954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 34534333 - 34534220
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||  ||||||||| |||||||||||||||||| |||| ||||||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  34534233 atttttcgtcctac 34534220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 19590528 - 19590641
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  19590628 atttttcatcctac 19590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 29099863 - 29099966
Alignment:
Q  360 ttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtc 459  Q
    ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  460 ctac 463  Q
    ||||    
T  29099963 ctac 29099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 4641438 - 4641556
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||||||||||||||||||||| ||||||||||| | || | ||||||||| || |||  |||| |||||||||||||||||| ||||| |||| |||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  4641538 gttgcatttttcgtcctac 4641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 23952733 - 23952847
Alignment:
Q  350 ttaattacacttttggttctcgtgttttg-ccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 448  Q
    ||||||||||||||||| ||||||||||| ||||| | |||||| || ||||||| |||||||||| |||||||||||||||||| |||| |||| ||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggttg 23952832  T
Q  449 catttttcgtcctac 463  Q
    |||||||||||||||    
T  23952833 catttttcgtcctac 23952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 32004617 - 32004730
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| ||||| |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 32004716  T
Q  450 atttttcgtcctac 463  Q
    |||||||| |||||    
T  32004717 atttttcgccctac 32004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 38859183 - 38859070
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||| | |||| ||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  38859083 atttttcgtcctac 38859070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 32005156 - 32005043
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| | || | ||||||||| ||||||| |||||||| | ||||||||||||||| || |||| ||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  32005056 atttttcgtcctac 32005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 35288906 - 35289019
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 35289005  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  35289006 atttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 35289443 - 35289334
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||| |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  35289343 atttttcgtc 35289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 29100400 - 29100280
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||||||||||||||||||||| |||||||||||  ||| | || ||| || || |||| |||||||||| |||||||||||| ||||| |||| |||    
T  29100400 aaaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattt 29100301  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    ||||||||||||| |||||||    
T  29100300 ttgttgcattttttgtcctac 29100280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 455
Target Start/End: Complemental strand, 19830967 - 19830856
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| |||| | || |||||| || || | |||||||||||||||||||||| |||||| |||| ||||    
T  19830967 aaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttt 19830868  T
Q  444 tgttgcattttt 455  Q
    ||||||||||||    
T  19830867 tgttgcattttt 19830856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 2658842 - 2658951
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || ||||||||||| |||| | ||||||||| || |||| |||||||| | ||||||| |||||||||| |||| ||||||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  2658942 atttttcgtc 2658951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 2659382 - 2659269
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| |||| |||||| |||||| | ||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2659283  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  2659282 atttttcatcctac 2659269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 34533794 - 34533907
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||  |||||||||| || |||| |||| ||||| |||| ||||||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  450 atttttcgtcctac 463  Q
    ||||| ||||||||    
T  34533894 attttccgtcctac 34533907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 37787309 - 37787196
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||  ||||||| || ||||||||||| |||||| |||| ||||||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  37787209 atttttcgtcctac 37787196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 38858640 - 38858759
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||| ||||||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||| ||||| |||| ||||    
T  38858640 aaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttt 38858739  T
Q  444 tgttgcatttttcgtcctac 463  Q
    |||||||||||| |||||||    
T  38858740 tgttgcatttttggtcctac 38858759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 38160954 - 38161067
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||| |||||| |||| | |||||| | ||| |||| |||||||||| |||||||  ||||||||| |||  ||||||||||    
T  38160954 ttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgc 38161053  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  38161054 atttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 4641983 - 4641873
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||   |||| || || | |||||||||| |||||||||||||||||| |||| ||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  450 atttttcgtcctac 463  Q
    || |||||||||||    
T  4641886 atatttcgtcctac 4641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 459
Target Start/End: Complemental strand, 23953268 - 23953162
Alignment:
Q  353 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 452  Q
    |||||| ||||||| |||||||||||  ||| | ||||||||| ||  ||| ||| |||||| |||||||||||||||||| |||| |||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  453 tttcgtc 459  Q
    |||||||    
T  23953168 tttcgtc 23953162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 459
Target Start/End: Complemental strand, 4478246 - 4478133
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    |||||||| |||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| || || |  ||||||||| |||| ||||||    
T  4478246 aggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttg 4478147  T
Q  446 ttgcatttttcgtc 459  Q
    ||||||||||||||    
T  4478146 ttgcatttttcgtc 4478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 28583442 - 28583555
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | | || | || |  |||| ||||||||||||| ||||| ||||||||| |||| ||||| ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  28583542 atttttcgtcctac 28583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 28584464 - 28584355
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || |||||| |||| |||||| |||||| || ||||| | |||||||||| |||||||  ||||||||| |||| |||||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  28584364 atttttcgtc 28584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 11165 - 11052
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11065 atttttcgtcctac 11052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 368 - 463
Target Start/End: Original strand, 10642 - 10737
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||| |||| | | ||||||| || |||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  10642 ctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctac 10737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 341 - 463
Target Start/End: Complemental strand, 12234880 - 12234758
Alignment:
Q  341 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 440  Q
    ||||| || ||||||| ||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||||| |||||||||||||||||| |||| |    
T  12234880 ttaaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcat 12234781  T
Q  441 ttttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||||    
T  12234780 ttttgttgcatttttcgtcctac 12234758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 346 - 462
Target Start/End: Complemental strand, 54995613 - 54995498
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||| |||||||| | |||||||||||||||||||||||  |||||    
T  54995613 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatc-attttg 54995515  T
Q  446 ttgcatttttcgtccta 462  Q
    |||||||||||||||||    
T  54995514 ttgcatttttcgtccta 54995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 20471053 - 20470940
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| |||| || |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  20470953 atttttcgtcctac 20470940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 23494985 - 23494872
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23494886  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  23494885 atttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 45082966 - 45082853
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  45082866 atttttcgtcctac 45082853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 18751597 - 18751712
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||||||||||||||||||||| ||||||||||| |||| | |  |||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  445 gttgcatttttcgtcc 460  Q
    ||||||||||||||||    
T  18751697 gttgcatttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 4220105 - 4219988
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | |||||||||||| |||  |||||||||| ||||||| |||| ||||| |||| ||||||    
T  4220105 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttg 4220006  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  4220005 ttgcatttttcgtcctac 4219988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 11153689 - 11153576
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11153589 atttttcgtcctac 11153576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 25447250 - 25447363
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  25447350 atttttcgtcctac 25447363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 343 - 463
Target Start/End: Complemental strand, 22170485 - 22170366
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||||||||||||| ||||||||||| |||| | |||||| || || ||||||||||||||| |||||||||||| ||||| |||| |||    
T  22170485 aaaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattt 22170387  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  22170386 ttgttgcatttttcgtcctac 22170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 350 - 461
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||| | |||||||||| ||||||| |||| |||||||||| ||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  450 atttttcgtcct 461  Q
    ||||||||||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 48526729 - 48526610
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||||||||||| ||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| ||||  |||    
T  48526729 aaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttt 48526630  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  48526629 tgttgcatttttcgtcctac 48526610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 15523781 - 15523663
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| |||||||||||||||||  ||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| ||||||||||||||| |||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  15523681 gttgcatttttcgtcctac 15523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 12234332 - 12234445
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| | |||| ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12234431  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  12234432 atttttcgtcctac 12234445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 15523238 - 15523351
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  ||||| ||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgc 15523337  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  15523338 atttttcgtcctac 15523351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 22434182 - 22434295
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  22434282 atttttcgtcctac 22434295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 25447778 - 25447665
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  25447678 atttttcgtcctac 25447665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 33110006 - 33109893
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| |||  | |||||| || || |||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  33109906 atttttcgtcctac 33109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 38962361 - 38962248
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| |||||||||||  ||||| ||||||||| ||  ||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  38962261 atttttcgtcctac 38962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 46193408 - 46193521
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  46193508 atttttcgtcctac 46193521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 46193947 - 46193834
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| ||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  46193847 atttttcgtcctac 46193834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 48526199 - 48526312
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||||||||||||||| |||| | | |||||||    |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  48526299 atttttcgtcctac 48526312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 54995068 - 54995185
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||| ||| |||| | ||||||||  || | || |||||||||| |||||||||||||||||| |||| ||||||    
T  54995068 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 54995167  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  54995168 ttgcatttttcgtcctac 54995185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 2118296 - 2118409
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| ||||||||||||||||||  ||||||||| |||| ||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  2118396 atttttcgtcctac 2118409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 4219560 - 4219673
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | |||||||| ||||||||| |||| ||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4219660 atttttcgtcctac 4219673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 22434722 - 22434606
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||| ||||||| ||||||||||| |||| | ||||||||| || |||| ||||||| || |||||||||||| ||||| |||| ||||||    
T  22434722 aggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttg 22434624  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  22434623 ttgcatttttcgtcctac 22434606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 33109687 - 33109800
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| | || | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  33109787 atttttcgtcctac 33109800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 343 - 463
Target Start/End: Original strand, 11153142 - 11153262
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| ||||||| ||||||||| ||||||||||| |||| | || ||| || ||||||| |||||||| | || ||||||||||||||| |||| |||    
T  11153142 aaaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattt 11153241  T
Q  443 ttgttgcatttttcgtcctac 463  Q
    |||||||||||||||||||||    
T  11153242 ttgttgcatttttcgtcctac 11153262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 2118843 - 2118724
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    |||||||||||||||||||||||  |||||||||| |||  | | ||||||| || |  | ||||||||||||||||||||||| ||||| |||| ||||    
T  2118843 aaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttt 2118744  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  2118743 tgttgcatttttcgtcctac 2118724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 350 - 461
Target Start/End: Original strand, 25937673 - 25937784
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||  |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  450 atttttcgtcct 461  Q
    |||||| |||||    
T  25937773 attttttgtcct 25937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 25938219 - 25938100
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| ||||    
T  25938219 aaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttt 25938120  T
Q  444 tgttgcatttttcgtcctac 463  Q
    |||||||||||| |||||||    
T  25938119 tgttgcattttttgtcctac 25938100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 23494446 - 23494559
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||| ||||||||||| |||| ||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  23494546 atttttcgtcctac 23494559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 51020800 - 51020913
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||| ||||||| |  ||| || |||||| || |||| |||||||||| ||||||||| |||||||| |||| ||||||||||    
T  51020800 ttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 51020899  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  51020900 atttttcgtcctac 51020913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 51021337 - 51021225
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||||||||||| || ||||  |||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatc-attttgttgc 51021239  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  51021238 atttttcgtcctac 51021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 16690933 - 16691052
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||||||||||||| ||||||| || ||||||||  ||| | |||||| || || ||||| ||||||||| |||||||   |||||||| |||| ||||    
T  16690933 aaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttt 16691032  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  16691033 tgttgcatttttcgtcctac 16691052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 461
Target Start/End: Complemental strand, 48713892 - 48713777
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||  ||||||||||||  |||| | | |||| || ||||||  |||||||||| |||||||  ||||||||| |||| ||||||    
T  48713892 aggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttg 48713793  T
Q  446 ttgcatttttcgtcct 461  Q
    ||||||||||||||||    
T  48713792 ttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 44892690 - 44892577
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| | ||||||| ||||||||||| |||| | |||||| || |  |||| |||||||||| |||||||| ||| ||||| ||| |||||||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  44892590 atttttcgtcctac 44892577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 45082431 - 45082547
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    |||||||||||| ||||||||  ||||||||||  ||| | ||||| ||| |  |||| |||||||| | |||||||||||||||||| |||| ||||||    
T  45082431 aggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 45082529  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  45082530 ttgcatttttcgtcctac 45082547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 463
Target Start/End: Original strand, 12503457 - 12503552
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||| | || | ||||||||||||  ||| |||||||||| |||||||  ||||||||| |||| ||||||||||||||||||||||||    
T  12503457 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 456
Target Start/End: Original strand, 44890511 - 44890626
Alignment:
Q  341 ttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctt 440  Q
    |||||| | ||||||||| ||||||| || |||||||| |||||| |||||| || ||||||| |||||||||| |||||||   ||||| || ||| ||    
T  44890511 ttaaaatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatatt 44890610  T
Q  441 ttttgttgcatttttc 456  Q
    ||||||||||||||||    
T  44890611 ttttgttgcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 461
Target Start/End: Original strand, 48293597 - 48293708
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | |||||| ||||| || || ||||||||| |||||||  || |||||| |||| ||||||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgc 48293696  T
Q  450 atttttcgtcct 461  Q
    ||||||| ||||    
T  48293697 atttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 48708298 - 48708401
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |  |||||||| ||||   |||||| ||||| |||| |||||||||| |||||||| ||||||||| |||| ||||||||||    
T  48708298 ttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgc 48708397  T
Q  450 attt 453  Q
    ||||    
T  48708398 attt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 35363143 - 35363029
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgc-ctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 448  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| |  ||| ||||| |||| | |||||||||||| ||||| |||| |||||||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttg 35363044  T
Q  449 catttttcgtcctac 463  Q
    |||||||||| ||||    
T  35363043 catttttcgttctac 35363029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 43243804 - 43243709
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||| |||| | |||||| || ||||||| |||||||||| |||||||  || |||||| |||| |||||||||||||||| |||||||    
T  43243804 ctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac 43243709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 455
Target Start/End: Complemental strand, 20958401 - 20958296
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || ||||| ||||| |||| | |||||| || || |||| |||||||||| ||||||   ||||||||| |||| ||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  450 attttt 455  Q
    ||||||    
T  20958301 attttt 20958296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 43242325 - 43242386
Alignment:
Q  402 cctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||    
T  43242325 cctttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctac 43242386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 12503912 - 12503869
Alignment:
Q  416 aacaaaacggtccttcaagtatcttttttgttgcatttttcgtc 459  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12503912 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 12503869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 43281314 - 43281220
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||| |||| | |||||| || ||||||| |||||||||| |||||||  || |||||| |||  ||||||||||||||||||||||||    
T  43281314 ctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctac 43281220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 48295085 - 48294979
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| |||||||  ||||||||||  ||| | |||||| || || ||||| ||||||||| |||||||  ||| ||||| |||| ||||||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  450 atttttc 456  Q
    |||||||    
T  48294985 atttttc 48294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 16318323 - 16318254
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaaca 414  Q
    |||| ||||||||||||||||| ||||||||||| |||| | || ||||||||| |||| ||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaaca 16318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 9452967 - 9453007
Alignment:
Q  7 tatatttaatgaattcaccgcttcatcttaaaagagcaaca 47  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  9452967 tatatttaatgaatttaccgcttcatcttaaaagagcaaca 9453007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 16691613 - 16691505
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | |  |||||||| |||| | |||||| || || ||||| |||||| ||||||||||  |||||| || |||  ||||||||||    
T  16691613 ttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgc 16691515  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  16691514 atttttcgtc 16691505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 20957196 - 20957301
Alignment:
Q  354 ttacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcattt 453  Q
    ||||| ||||||| |||| |||||| | || | |||||| || |||| |  |||||||||| |||||||  ||||||||| ||||  |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  454 ttcgtc 459  Q
    ||||||    
T  20957296 ttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 4796 - 4909
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4896 atttttcgtcctac 4909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 350 - 461
Target Start/End: Complemental strand, 5333 - 5222
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || || | |||||||||| || ||||||||  ||||| |||| ||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  450 atttttcgtcct 461  Q
    ||||||||||||    
T  5233 atttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 11445529 - 11445416
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11445429 atttttcgtcctac 11445416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 15828188 - 15828070
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |||| || |||||||||| |||||||||||||||||| |||| |||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  15828088 gttgcatttttcgtcctac 15828070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 2319675 - 2319788
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  2319775 atttttcgtcctac 2319788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 10900472 - 10900359
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  10900372 atttttcgtcctac 10900359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 12935160 - 12935273
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  12935260 atttttcgtcctac 12935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 23075670 - 23075557
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23075571  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  23075570 atttttcgttctac 23075557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 348 - 463
Target Start/End: Original strand, 18504920 - 18505035
Alignment:
Q  348 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 447  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||||| || ||||||||||||||| ||||||||||| |||||| |||| ||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  448 gcatttttcgtcctac 463  Q
     |||||||||||||||    
T  18505020 tcatttttcgtcctac 18505035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 10899941 - 10900055
Alignment:
Q  349 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 448  Q
    ||||||||||||||||||  |||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  449 catttttcgtcctac 463  Q
    |||||||||||||||    
T  10900041 catttttcgtcctac 10900055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 18505461 - 18505348
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| |||||||||||  ||| | |||||||||||| |||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  18505361 atttttcgtcctac 18505348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 20741103 - 20741216
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  20741203 atttttcgtcctac 20741216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 22219895 - 22219782
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22219796  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  22219795 atttttcgttctac 22219782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 2322762 - 2322647
Alignment:
Q  348 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 447  Q
    |||||||||||||||||||  ||||||||||  ||| | ||||||||  || ||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  448 gcatttttcgtcctac 463  Q
    ||||||||||||||||    
T  2322662 gcatttttcgtcctac 2322647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 11277124 - 11277011
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||| |||||| |||| ||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11277024 atttttcgtcctac 11277011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 12935699 - 12935586
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || ||||||| ||||||| |||||||||||||||||| |||| |||||||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  12935599 atttttcgtcctac 12935586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 18257140 - 18257249
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  18257240 atttttcgtc 18257249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 20741652 - 20741530
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc---tt 440  Q
    ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| ||||   ||    
T  20741652 aaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 20741553  T
Q  441 ttttgttgcatttttcgtcctac 463  Q
    |||| ||||||||||||||||||    
T  20741552 tttttttgcatttttcgtcctac 20741530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 4811798 - 4811692
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||| | ||||||||||| |||| | | |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  450 atttttc 456  Q
    |||||||    
T  4811698 atttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 1149974 - 1149861
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||  |||| | | ||||||| ||||||| |||||||| | |||||||||||||||||| || | ||||||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  1149874 atttttcgtcctac 1149861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 18257679 - 18257566
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||  |||||||| |    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttac 18257580  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  18257579 atttttcgtcctac 18257566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 31470858 - 31470745
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||  |||| | ||||||||| |  |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31470759  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  31470758 atttttcgtcctac 31470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 31470313 - 31470431
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||| | ||||||||||| |||| | ||||||||| ||||||  |||||||||| |||||||| ||| ||||| |||  |||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattattttt 31470412  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  31470413 gttgcatttttcgtcctac 31470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 11444990 - 11445103
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||| ||| || ||||  ||||||||| || |||| |||||||||| |||| ||||||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  11445090 atttttcgtcctac 11445103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 28472640 - 28472753
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  28472640 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 28472739  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  28472740 atttttcgtcctac 28472753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 29859829 - 29859942
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| || | | |||||| || || |||| |||||||||| ||||||| |||| ||||| |||| ||||||||||    
T  29859829 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 29859928  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  29859929 atttttcgtcctac 29859942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 15827641 - 15827756
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaa--acggtccttcaagtatcttttttgtt 447  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| |  || | |||||||||||||||||  |||||||||||| |||| ||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  448 gcatttttcgtcctac 463  Q
    ||||||||||||||||    
T  15827741 gcatttttcgtcctac 15827756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 23073997 - 23074096
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||| | |||||||||||||||||| |||| |||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 3835273 - 3835155
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||||||||||||||||||||| |  |||||||| |||| | |||||| || || ||||| ||||||||| |||||||  |||||| || |||| |||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattttt 3835174  T
Q  445 gttgcatttttcgtcctac 463  Q
    || ||||||||||||||||    
T  3835173 gtggcatttttcgtcctac 3835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 4811375 - 4811484
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |  || |||||  ||| | ||||||||| ||||||| |||||||| | || ||||||||||||||| |||| |||||||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  4811475 atttttcgtc 4811484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 463
Target Start/End: Original strand, 11276585 - 11276706
Alignment:
Q  342 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 441  Q
    ||||||| |||||||||| ||| || | |||||||||  ||| | | |||||||||| | || |||||||||| ||||||| |||||||||| | || ||    
T  11276585 taaaaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatt 11276684  T
Q  442 tttgttgcatttttcgtcctac 463  Q
    |||||| |||||||||||||||    
T  11276685 tttgtttcatttttcgtcctac 11276706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 1149468 - 1149551
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaa 433  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| ||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaa 1149551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 460
Target Start/End: Complemental strand, 29035179 - 29035069
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || ||||||||||  |||| | |||||| || | ||||| |||||||||| |||||||  |||||| |  |||| ||||||||||    
T  29035179 ttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgc 29035080  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  29035079 atttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 18296148 - 18296261
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| | |||| || ||||||||||| | || | || ||| ||||  |||| |||||||||| |||||||| ||||||||  |||| ||||||||||    
T  18296148 ttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgc 18296247  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  18296248 atttttcgtcctac 18296261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 29033437 - 29033550
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||| ||||| |||  | |||||| || || |||| |||||||||| |||||||| ||||||||  |||| ||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  450 atttttcgtcctac 463  Q
    |  |||| ||||||    
T  29033537 acatttcatcctac 29033550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 2864757 - 2864870
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||| |||| | |||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  2864857 atttttcgtcctac 2864870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 18182969 - 18183086
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    |||||||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||    
T  18182969 aggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183068  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  18183069 ttgcatttttcgtcctac 18183086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 5818917 - 5819041
Alignment:
Q  335 acaaatttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaag 434  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| |||||     
T  5818917 acaaatttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaat 5819016  T
Q  435 tatcttttttgttgcatttttcgtc 459  Q
    |||| ||||||||||||||||||||    
T  5819017 tatcatttttgttgcatttttcgtc 5819041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 8647980 - 8647871
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 8647881  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  8647880 atttttcgtc 8647871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 14215785 - 14215676
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| |||| | |||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  14215685 atttttcgtc 14215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 346 - 455
Target Start/End: Complemental strand, 15372419 - 15372310
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  15372419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 15372320  T
Q  446 ttgcattttt 455  Q
    ||||||||||    
T  15372319 ttgcattttt 15372310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 18183511 - 18183398
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  18183411 atttttcgtcctac 18183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 2865297 - 2865184
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  2865197 atttttcgtcctac 2865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 5819471 - 5819358
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  5819371 atttttcgtcctac 5819358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 8647441 - 8647554
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  8647541 atttttcgtcctac 8647554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 19359678 - 19359565
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||     
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgg 19359579  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  19359578 atttttcgtcctac 19359565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 24362378 - 24362265
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||| ||||| |||| | ||||||||| || |||| |||||||||| || |||||||||||||||||||| ||||||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  24362278 atttttcgtcctac 24362265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 15708974 - 15709087
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||| |||| | ||||||||| | ||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  450 atttttcgtcctac 463  Q
    || |||||||||||    
T  15709074 atatttcgtcctac 15709087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 19359139 - 19359252
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||| | |||||||||||||||||| |||| ||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  19359239 atttttcgtcctac 19359252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 8461478 - 8461364
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| |||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattttt 8461379  T
Q  445 gttgcatttttcgtc 459  Q
    | |||||||||||||    
T  8461378 gctgcatttttcgtc 8461364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 24361843 - 24361953
Alignment:
Q  353 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 452  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  453 tttcgtcctac 463  Q
    |||||||||||    
T  24361943 tttcgtcctac 24361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 463
Target Start/End: Complemental strand, 29455289 - 29455171
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| |||||||||| |||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| ||||||| |||||||||| |||| |||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 29455190  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  29455189 gttgcatttttcgtcctac 29455171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 16018586 - 16018704
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| |||||||||||||||||  |||||||||| |||||| |||||| |||||||||| |||||||| | |||||||||||||||||| |||  ||||    
T  16018586 aaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttt 16018684  T
Q  444 tgttgcatttttcgtcctac 463  Q
    | ||||||||| ||||||||    
T  16018685 tattgcattttccgtcctac 16018704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 350 - 462
Target Start/End: Original strand, 24331562 - 24331676
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc--ttttttgtt 447  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| || |||| |||||||||| |||||||||||||||||| ||||  |||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  448 gcatttttcgtccta 462  Q
    ||||||||| |||||    
T  24331662 gcatttttcatccta 24331676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 353 - 463
Target Start/End: Original strand, 24325218 - 24325328
Alignment:
Q  353 attacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatt 452  Q
    |||||||||||||| | | ||||||| ||||   ||||||||||||||||| || ||||||| ||||||| ||||||||||||||| ||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  453 tttcgtcctac 463  Q
    |||||||||||    
T  24325318 tttcgtcctac 24325328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 164194 - 164306
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| ||||| |||| |||||||||||| ||||| ||||  |||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatc-attttgttgc 164292  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  164293 atttttcgtcctac 164306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 14215244 - 14215357
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | ||||||||| | || || |||||||||| ||||||| |||||||||  |||| ||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  14215344 atttttcgtcctac 14215357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 29454738 - 29454856
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| |||||| ||||||||||  | |||||||| |||| | |||||| || ||||||| |||||||||| ||||||||||||||| || |||| |||||    
T  29454738 aaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcattttt 29454837  T
Q  445 gttgcatttttcgtcctac 463  Q
    | |||||||||||||||||    
T  29454838 gctgcatttttcgtcctac 29454856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 4219666 - 4219779
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | |||||||||||  |||||||| ||| || |||||||||||||||||| ||||||   |||||| |  |||| ||||||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4219766 atttttcgtcctac 4219779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 8460933 - 8461042
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||| ||||||||||  |||| ||||| |||| | ||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  8460933 ttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 8461032  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  8461033 atttttcgtc 8461042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 14464062 - 14463949
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || ||||||||||| |||| | |||||||| ||  || | |||||||| | ||||||||| |||||||| |||| ||||| ||||    
T  14464062 ttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgc 14463963  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  14463962 atttttcgtcctac 14463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 460
Target Start/End: Complemental strand, 25000638 - 25000521
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    |||||| |||||||||||||||||  || ||||||| |||| | |||||| || |||||   |||||||||| ||||||| |||| ||||| |||| |||    
T  25000638 aaaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcattt 25000539  T
Q  443 ttgttgcatttttcgtcc 460  Q
    ||||||||||||||||||    
T  25000538 ttgttgcatttttcgtcc 25000521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 463
Target Start/End: Complemental strand, 164693 - 164620
Alignment:
Q  390 aaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    |||||| || |||| |||||||||| |||||||||||||||||| |||| |||||||||||||||| |||||||    
T  164693 aaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctac 164620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 4222264 - 4222151
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||  | |||||| || ||||||| |||||||||| |||||||  ||| ||||  |||| ||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4222164 atttttcgtcctac 4222151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 460
Target Start/End: Original strand, 15371874 - 15371983
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||| |||||  ||| | |||||  || || |||| |||||||||| ||||||| |||||||||| |||| ||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15371972  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  15371973 atttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 4623151 - 4623264
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| | || | |||||| || || ||||| ||||||||| |||||||  ||||||||| |||| ||||| | ||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggc 4623250  T
Q  450 atttttcgtcctac 463  Q
    ||||| ||||||||    
T  4623251 attttccgtcctac 4623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 6018317 - 6018429
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| |||||||||||||||||||  ||| | ||||||||| ||||| | |||||||||| |||||||   | |||||| |||| ||||||||||    
T  6018317 ttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgc 6018415  T
Q  450 atttttcgtcctac 463  Q
    | |||| |||||||    
T  6018416 agttttagtcctac 6018429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 7349559 - 7349446
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||| | |||||| || || |||  |||||||||| ||||||||  |||||||  |||| ||||||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  450 atttttcgtcctac 463  Q
    | ||||| ||||||    
T  7349459 acttttcatcctac 7349446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 15709510 - 15709398
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  | |||||||| |||| | | ||||||  ||||||| ||| |||||| ||||||||||||||| |  |||| ||| ||||||    
T  15709510 ttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgc 15709412  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  15709411 atttttcgtcctac 15709398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 16019133 - 16019016
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||| ||||||| | || | |||||| || || |||  |||||||| | || |||| ||| |||||| |||| ||||||    
T  16019133 aggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttg 16019034  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||| ||||||||||||||    
T  16019033 ttgtatttttcgtcctac 16019016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 24332106 - 24331989
Alignment:
Q  350 ttaattacacttttggttc-tcgtgttttgccctatttacgaaactgatcatgccttttt-aaaacataacaaaacggtccttcaagtatc-ttttttgt 446  Q
    |||||||||||||| | || || ||||||| | || | |||||||||||| ||||||||| |||||| |||||||||||||| ||| |||| ||||||||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  447 tgca-tttttcgtcctac 463  Q
    |||| |||||||||||||    
T  24332006 tgcattttttcgtcctac 24331989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 4624749 - 4624654
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||  |||| | |||||| || ||||| || ||||||||||||||||||  || ||||| |||| ||| ||||||||||||||||||||    
T  4624749 ctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctac 4624654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 37511204 - 37511253
Alignment:
Q  189 actcatttcattaatcaatgaagagttaatacaaagaggaacataatcat 238  Q
    ||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  37511204 actcatttcgttaatcaataaaaagttaatacaaagaggaacataatcat 37511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 6019276 - 6019199
Alignment:
Q  387 acgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcat-ttttcgtcctac 463  Q
    |||||||||||| |||  |||||||||| |||||||| ||| || || |||| |||||||||||| ||||||||||||    
T  6019276 acgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctac 6019199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 7348562 - 7348675
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||| ||||||   ||| | |||||| || || |||| |||||||||| ||||||||  ||||||   |||| ||||||||||    
T  7348562 ttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgc 7348661  T
Q  450 atttttcgtcctac 463  Q
    | ||||||||||||    
T  7348662 acttttcgtcctac 7348675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 15079059 - 15079021
Alignment:
Q  309 aataaactttacctcaaagttacattacaaatttaaaag 347  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15079059 aataaactttacctcaaagttacaatgcaaatttaaaag 15079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 22374323 - 22374436
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  22374423 atttttcgtcctac 22374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 339 - 463
Target Start/End: Original strand, 11090513 - 11090637
Alignment:
Q  339 atttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatc 438  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| ||||    
T  11090513 atttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatc 11090612  T
Q  439 ttttttgttgcatttttcgtcctac 463  Q
     ||||||||||||||||||||||||    
T  11090613 atttttgttgcatttttcgtcctac 11090637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 40815348 - 40815461
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||||||||||||||| |||||| |||| ||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  40815448 atttttcgtcctac 40815461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 346 - 463
Target Start/End: Complemental strand, 40815891 - 40815774
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    ||||||||||||||||||||| ||||||||||| |||| | ||||||||| | ||||| |||||||||| |||||||||| ||||||| |||| ||||||    
T  40815891 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttg 40815792  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  40815791 ttgcatttttcgtcctac 40815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 344 - 463
Target Start/End: Complemental strand, 40027688 - 40027569
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||||||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||| ||||| |||| ||||    
T  40027688 aaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 40027589  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||||||||||    
T  40027588 tgttgcatttttcgtcctac 40027569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 40027138 - 40027256
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| |||||||||||||||||  |||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 40027237  T
Q  445 gttgcatttttcgtcctac 463  Q
    ||||||||||| |||||||    
T  40027238 gttgcattttttgtcctac 40027256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 346 - 463
Target Start/End: Original strand, 3025465 - 3025582
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttg 445  Q
    |||||| |||||| ||||||| ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||||||||||||||||||| ||||||    
T  3025465 aggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttg 3025564  T
Q  446 ttgcatttttcgtcctac 463  Q
    ||||||||||||||||||    
T  3025565 ttgcatttttcgtcctac 3025582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 22374867 - 22374754
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  22374767 atttttcgtcctac 22374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 26538621 - 26538508
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| | |||||||| |||||||||||||||||| |||| ||||||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26538522  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  26538521 atttttcgtcctac 26538508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 28616616 - 28616729
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  450 atttttcgtcctac 463  Q
    | ||||||||||||    
T  28616716 aattttcgtcctac 28616729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 11091062 - 11090950
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||| ||||||| |||||||||| |||||||||||||||||| |||| || ||||||     
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgt 11090963  T
Q  450 atttttcgtccta 462  Q
    |||||||||||||    
T  11090962 atttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 347 - 463
Target Start/End: Original strand, 14432142 - 14432258
Alignment:
Q  347 ggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgt 446  Q
    |||||||||||||||||||| ||||||||||| |||| | | ||||||| || |||| |||||||| |||||||||||||||||||| |||| |||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  447 tgcatttttcgtcctac 463  Q
    ||||||||| |||||||    
T  14432242 tgcatttttggtcctac 14432258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 239356 - 239468
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| |||| | ||||||||| || |||||||| |||||| |||||||||||||||||| |||| ||||||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  239455 atttttcgtcctac 239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 7446888 - 7446775
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||| | ||||||||||||| || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 7446789  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  7446788 atttttcgtcctac 7446775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 18451373 - 18451260
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||  ||||||||| |||| ||||||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  18451273 atttttcttcctac 18451260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 20444746 - 20444865
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| |||||||||||||||||  |||| ||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||| ||||||||||||    
T  20444846 tgttgcagttttcgtcctac 20444865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 18450828 - 18450946
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| ||  ||| |||||||||| |||||||||||||||||| |||| |||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  445 gttgcatttttcgtcctac 463  Q
     |||||||||| |||||||    
T  18450928 tttgcatttttagtcctac 18450946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 345 - 463
Target Start/End: Original strand, 26538095 - 26538213
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| | || | ||||||||| |  |||| |||||||||| |||||| ||||||||||| |||| |||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 26538194  T
Q  445 gttgcatttttcgtcctac 463  Q
    |||||||||||||||||||    
T  26538195 gttgcatttttcgtcctac 26538213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 28847237 - 28847124
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| |||||||||||  ||| | ||||||||| || |||  |||||||||| |||||||||||||||||| |||| ||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 28847138  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  28847137 atttttcgtcctac 28847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 43058336 - 43058449
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| || | | || |||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  43058436 atttttcgttctac 43058449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 35781205 - 35781093
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| || ||||||| |||||||||| ||||||||  |||||||| |||| ||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  450 atttttcgtccta 462  Q
    |||||||||||||    
T  35781105 atttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 350 - 461
Target Start/End: Original strand, 1978111 - 1978222
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| || |||||||| |||| | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  450 atttttcgtcct 461  Q
    |||||| |||||    
T  1978211 attttttgtcct 1978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 28617161 - 28617047
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| |||| | ||||||||| |  || | |||||||||| ||||||| |||||||||| |||| |||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  445 gttgcatttttcgtc 459  Q
    |||||||||||||||    
T  28617061 gttgcatttttcgtc 28617047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 1978651 - 1978538
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| || |||||||| |||| | |||||| || || |||| |||||||||| |||||||| ||||||||| |||| ||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 1978552  T
Q  450 atttttcgtcctac 463  Q
    |||||| |||||||    
T  1978551 attttttgtcctac 1978538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 462
Target Start/End: Complemental strand, 20440573 - 20440461
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| || | | ||||||||| || |||| |||||||||| |||||||||||| ||||  |||| ||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  450 atttttcgtccta 462  Q
    | |||||||||||    
T  20440473 agttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 463
Target Start/End: Original strand, 8425357 - 8425470
Alignment:
Q  349 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 448  Q
    |||||||||||||||||| || |||||||| |||| | |||||| || || | ||||||||||||| ||||||||||| |||||| |||| ||| |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttg 8425455  T
Q  449 catttttcgtcctac 463  Q
    |||||||||||||||    
T  8425456 catttttcgtcctac 8425470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 8425903 - 8425793
Alignment:
Q  349 tttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttg 448  Q
    ||||||||||||||||||||| ||||||||  ||| | |||||| || || |||| |||||||| | |||||||| ||||||||| |||| |||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  449 catttttcgtc 459  Q
    |||||||||||    
T  8425803 catttttcgtc 8425793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 350 - 460
Target Start/End: Original strand, 15551502 - 15551612
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||   || | |||||| || |||||||||||||||||| |||||||  ||||||||  |||| ||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  450 atttttcgtcc 460  Q
    |||||||||||    
T  15551602 atttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 239890 - 239785
Alignment:
Q  354 ttacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcattt 453  Q
    ||||||||||||| ||||||||||| |||| | |||||| || || |||| |||||||||| ||||||| |||||||||| |||| |||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  454 ttcgtc 459  Q
    ||||||    
T  239790 ttcgtc 239785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 35779711 - 35779824
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | || | |||||| || || |||| |||||||||| |||||||  ||||||||| |||| ||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  450 atttttcgtcctac 463  Q
    |||||| |||||||    
T  35779811 attttttgtcctac 35779824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 43058874 - 43058762
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | ||||||||| || |||  |||||||||| ||||||| |||||||||| ||||  |||||||||    
T  43058874 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatc-attttgttgc 43058776  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  43058775 atttttcgtcctac 43058762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 14432683 - 14432570
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| |||| | | ||||||| ||||||| |||||||||| || |||| ||| |||||| |||  ||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  450 atttttcgtcctac 463  Q
    ||||||| ||||||    
T  14432583 atttttcatcctac 14432570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 9363293 - 9363209
Alignment:
Q  71 taacaaagtgttgaaaaatggcctatatgttgttaaggtgtaaaaaatgttgaaaaaatttataattaatgtgtgattttgtatgta 157  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||| |||||||| ||||||||||   ||||||||||||||||||    
T  9363293 taacaaagtgttgagaaatggcttatatgtcgttaagttgtaaaaagtgttgaaacaatttataat--ctgtgtgattttgtatgta 9363209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 7446340 - 7446454
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||| | |||||||||||  ||| | | |||| || || |||| |||||||||| |||||||||||| ||||| |||| |||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  445 gttgcatttttcgtc 459  Q
     ||||||||||||||    
T  7446440 attgcatttttcgtc 7446454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 3026003 - 3025892
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||| ||||||| ||||||||||| | || | |||||| || |  |||| |||||||||| |||||||||||||||||| |||  ||||||||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  3025905 atttttcgtcctac 3025892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 8972240 - 8972353
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| | |  | |||||| || ||||||| ||| |||||| |||||||  ||| ||||| |||| ||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  450 atttttcgtcctac 463  Q
    ||||||||| ||||    
T  8972340 atttttcgttctac 8972353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 15552595 - 15552483
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |  ||||||| |||| | |||||| |||||  ||| |||||||||| |||||||  ||| ||||| |||| |||||||||     
T  15552595 ttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgt 15552497  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  15552496 atttttcgtcctac 15552483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 422
Target Start/End: Original strand, 20495192 - 20495268
Alignment:
Q  346 aggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaa 422  Q
    |||||||||| |||||||||||||||  ||||| || | | |||||| ||||||||||| ||| |||  ||||||||    
T  20495192 aggtttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaa 20495268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 2209 - 2096
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||| || |||| |||||||||| |||||||||||| ||||| |||| ||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  2109 atttttcgtcctac 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 1670 - 1783
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||| ||||||| |||| | ||||||||| || |||| |||||||||| ||||||| | |||||||| |||| ||||||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  1770 atttttcgtcctac 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 342 - 461
Target Start/End: Complemental strand, 28793 - 28674
Alignment:
Q  342 taaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttt 441  Q
    |||||||  ||||||||||||||||  |||||||||| |||| ||||||||||| ||||||| |||||||||| |||||||||||| ||||| |||| ||    
T  28793 taaaaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatt 28694  T
Q  442 tttgttgcatttttcgtcct 461  Q
    ||||||||| ||||||||||    
T  28693 tttgttgcagttttcgtcct 28674  T

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Target: scaffold0027 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 455
Target Start/End: Original strand, 42167 - 42277
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    ||||||||||||||||||| ||||||||||||||  ||| | |||||||||||| |||| |||||||||| |||||||||||| ||||| |||| |||||    
T  42167 aaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcattttt 42266  T
Q  445 gttgcattttt 455  Q
    |||||||||||    
T  42267 gttgcattttt 42277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 42700 - 42587
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||| ||||||||  |||||||||||  ||| | | |||||||||  |||| |||||||||| |||||||||||||||||  |||| |||||||| |    
T  42700 ttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttc 42601  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  42600 atttttcgtcctac 42587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 64300 - 64414
Alignment:
Q  345 aaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    |||| ||||||||||||||||| ||||||||||| | || | |||||||||||| || | |||||||||| |||||||||||||||||| |||| |||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcattttt 64399  T
Q  445 gttgcatttttcgtc 459  Q
    |||||||||||||||    
T  64400 gttgcatttttcgtc 64414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 64853 - 64735
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||||||||||||||||||||| ||||||||||| | || | ||||||||| ||  ||| |||||||||| ||||||||||||||| || |||| ||||    
T  64853 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttt 64754  T
Q  444 tgttgcatttttcgtccta 462  Q
    |||||||||||||||||||    
T  64753 tgttgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 459
Target Start/End: Original strand, 570 - 679
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||| | ||||||||||| |||| | |||||| |||||||||| |||||||||| |||||||| ||||||||| |||| |||||||||     
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgt 669  T
Q  450 atttttcgtc 459  Q
    ||||||||||    
T  670 atttttcgtc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 1283 - 1170
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||| || ||||||||||| | || | ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  450 atttttcgtcctac 463  Q
    || |||||||||||    
T  1183 atctttcgtcctac 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 756 - 868
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| |||| | |||| |||| || |||| |||||||||| |||||||||||||||||| ||||  |||||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc-attttgttgc 854  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  855 atttttcgtcctac 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 10414 - 10301
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| |||||||||||  ||| | ||||||||| |  | || |||||||||| |||||||||||||||||| |||| ||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  10314 atttttcgtcctac 10301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 9928 - 10039
Alignment:
Q  343 aaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttt 442  Q
    ||||| |||||||||| ||||||| ||||||||||  |||||| |||||||||||| |||| |||||| | | ||||||| |||||||||| ||||  ||    
T  9928 aaaagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatt 10027  T
Q  443 ttgttgcatttt 454  Q
    ||||| ||||||    
T  10028 ttgttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 4749 - 4636
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    |||||||||||||||||  |||||||||| | || | ||||||||| || |||| |||||||||| ||||||||||||||| || |||| ||||||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  4649 atttttcgtcctac 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 4243 - 4319
Alignment:
Q  387 acgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  4243 acgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctac 4319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 134215 - 134102
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgc 449  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  ||||||| |||||| ||| ||||||||| |||||||| || | ||||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgc 134116  T
Q  450 atttttcgtcctac 463  Q
    ||||||||||||||    
T  134115 atttttcgtcctac 134102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 463
Target Start/End: Original strand, 18832 - 18951
Alignment:
Q  344 aaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttt 443  Q
    ||||| || |||||||||||||| ||  ||||||| |||| | ||||||||| || |||| |||||||||||||||||||||| |||||| |||| ||||    
T  18832 aaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttt 18931  T
Q  444 tgttgcatttttcgtcctac 463  Q
    ||||||||||||| ||||||    
T  18932 tgttgcatttttcatcctac 18951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  350 ttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatctttttt 444  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||||  || |||| |||||||||| |||||||||||||||||| |||| |||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 450
Target Start/End: Complemental strand, 8561 - 8451
Alignment:
Q  340 tttaaaaggtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatct 439  Q
    |||||| ||||||||||||||||||||  || |||||||  ||| ||||||||||| || | || |||||||||| | |||||||||||||||| ||||     
T  8561 tttaaatggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatca 8462  T
Q  440 tttttgttgca 450  Q
    |||||||||||    
T  8461 tttttgttgca 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 463
Target Start/End: Complemental strand, 17020 - 16925
Alignment:
Q  368 ctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    ||||||||||| | || | ||||||||||||  ||| |||||||||| |||||||  ||||||||| |||| ||||||||||||||||||||||||    
T  17020 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 16565 - 16608
Alignment:
Q  416 aacaaaacggtccttcaagtatcttttttgttgcatttttcgtc 459  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  16565 aacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 16608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 454 - 565
Alignment:
Q  351 taattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgttgca 450  Q
    |||||||| |||||||  |||||||||| |||| | |||||| || |||||   |||||||||| |||| ||  ||||||||| |||| |||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  451 tttttcgtcctac 463  Q
    |||||||||||||    
T  553 tttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 7775 - 7717
Alignment:
Q  405 ttttaaaacataacaaaacggtccttcaagtatcttttttgttgcatttttcgtcctac 463  Q
    |||||||||| |||||||| ||| ||||  |||| ||||||||||||||||||||||||    
T  7775 ttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctac 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 463
Target Start/End: Complemental strand, 62002 - 61887
Alignment:
Q  348 gtttaattacacttttggttctcgtgttttgccctatttacgaaactgatcatgcctttttaaaacataacaaaacggtccttcaagtatcttttttgtt 447  Q
    ||||||||||||||||| | |||||||||||  ||| | |||||| || || | || |||||||| | |||||||   || ||||| |||| ||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgtt 61903  T
Q  448 gcatttttcgtcctac 463  Q
      ||||||||||||||    
T  61902 atatttttcgtcctac 61887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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