View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0925_low_66 (Length: 344)

Name: NF0925_low_66
Description: NF0925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0925_low_66
NF0925_low_66
[»] chr3 (26 HSPs)
chr3 (15-265)||(31597367-31597617)
chr3 (260-318)||(34482742-34482800)
chr3 (260-318)||(37522206-37522264)
chr3 (260-332)||(37216907-37216979)
chr3 (260-318)||(3137268-3137326)
chr3 (260-318)||(3574380-3574438)
chr3 (260-318)||(19650754-19650811)
chr3 (260-305)||(3089585-3089630)
chr3 (261-318)||(3456217-3456274)
chr3 (260-305)||(8320436-8320481)
chr3 (260-305)||(30385566-30385611)
chr3 (260-318)||(22426199-22426256)
chr3 (260-305)||(2754885-2754930)
chr3 (260-305)||(6042043-6042088)
chr3 (260-305)||(33113960-33114005)
chr3 (260-305)||(48161072-48161117)
chr3 (260-305)||(26612912-26612957)
chr3 (260-317)||(33145866-33145923)
chr3 (262-318)||(42921278-42921334)
chr3 (264-305)||(11347435-11347476)
chr3 (260-305)||(33839701-33839746)
chr3 (260-305)||(42298028-42298073)
chr3 (260-305)||(47738277-47738322)
chr3 (260-302)||(36864887-36864929)
chr3 (260-305)||(24343715-24343760)
chr3 (260-304)||(46919061-46919105)
[»] scaffold0228 (3 HSPs)
scaffold0228 (260-318)||(26089-26147)
scaffold0228 (260-318)||(16137-16195)
scaffold0228 (268-318)||(8555-8605)
[»] chr8 (27 HSPs)
chr8 (260-318)||(3596895-3596953)
chr8 (260-318)||(17841704-17841762)
chr8 (260-318)||(25581093-25581151)
chr8 (260-318)||(26041967-26042025)
chr8 (260-318)||(40779983-40780041)
chr8 (260-332)||(14128998-14129070)
chr8 (260-318)||(6108087-6108145)
chr8 (260-318)||(8453987-8454044)
chr8 (260-318)||(42754896-42754954)
chr8 (260-318)||(32064898-32064957)
chr8 (260-318)||(15187714-15187771)
chr8 (260-318)||(32394011-32394068)
chr8 (260-305)||(1645818-1645863)
chr8 (260-305)||(24211226-24211271)
chr8 (260-318)||(20091655-20091713)
chr8 (260-318)||(35353194-35353252)
chr8 (260-318)||(37985910-37985967)
chr8 (260-318)||(39772656-39772714)
chr8 (260-305)||(10044514-10044559)
chr8 (260-318)||(30055669-30055727)
chr8 (260-318)||(34665535-34665592)
chr8 (260-295)||(1503697-1503732)
chr8 (266-305)||(38017098-38017137)
chr8 (260-305)||(41819622-41819667)
chr8 (260-318)||(27835307-27835365)
chr8 (260-289)||(31347630-31347659)
chr8 (260-305)||(37132535-37132580)
[»] chr7 (14 HSPs)
chr7 (260-318)||(35445550-35445608)
chr7 (260-318)||(30848722-30848780)
chr7 (260-318)||(3962132-3962189)
chr7 (260-318)||(42611964-42612022)
chr7 (260-318)||(45637865-45637922)
chr7 (260-318)||(48880781-48880839)
chr7 (260-305)||(24395137-24395182)
chr7 (260-305)||(35876410-35876455)
chr7 (260-318)||(4974589-4974647)
chr7 (260-305)||(15329440-15329485)
chr7 (260-305)||(15577701-15577746)
chr7 (260-305)||(34483004-34483049)
chr7 (260-318)||(42696236-42696294)
chr7 (260-302)||(29737313-29737355)
[»] chr5 (16 HSPs)
chr5 (260-318)||(25398391-25398449)
chr5 (260-318)||(33584183-33584241)
chr5 (260-318)||(3521861-3521918)
chr5 (260-318)||(4892355-4892413)
chr5 (260-318)||(6043366-6043423)
chr5 (260-318)||(8145527-8145584)
chr5 (260-318)||(37321647-37321705)
chr5 (260-318)||(38899580-38899638)
chr5 (263-318)||(2477789-2477844)
chr5 (260-318)||(3362931-3362990)
chr5 (260-318)||(4433862-4433919)
chr5 (260-318)||(14138821-14138878)
chr5 (260-305)||(12614592-12614637)
chr5 (260-305)||(12850968-12851013)
chr5 (260-318)||(11360985-11361043)
chr5 (260-318)||(13664713-13664770)
[»] chr4 (23 HSPs)
chr4 (260-318)||(44893067-44893125)
chr4 (260-318)||(44893579-44893637)
chr4 (260-318)||(46441997-46442055)
chr4 (260-318)||(2624990-2625048)
chr4 (260-318)||(24128392-24128450)
chr4 (260-318)||(36073503-36073560)
chr4 (260-318)||(47290219-47290277)
chr4 (260-318)||(49387741-49387800)
chr4 (260-318)||(9089023-9089081)
chr4 (260-318)||(22199413-22199470)
chr4 (260-318)||(31078673-31078731)
chr4 (260-318)||(50156433-50156490)
chr4 (260-318)||(53123184-53123242)
chr4 (260-318)||(7744966-7745024)
chr4 (260-318)||(21802174-21802231)
chr4 (260-305)||(4751613-4751658)
chr4 (260-305)||(33530538-33530583)
chr4 (260-305)||(36073117-36073162)
chr4 (260-305)||(17655596-17655641)
chr4 (260-305)||(23964318-23964363)
chr4 (260-305)||(10442641-10442687)
chr4 (260-318)||(30563362-30563420)
chr4 (260-318)||(37934796-37934853)
[»] chr2 (13 HSPs)
chr2 (260-318)||(7475362-7475420)
chr2 (260-318)||(23267916-23267974)
chr2 (260-318)||(33380360-33380418)
chr2 (260-332)||(10662026-10662099)
chr2 (260-318)||(3989229-3989287)
chr2 (260-318)||(21936235-21936293)
chr2 (260-305)||(35160925-35160970)
chr2 (260-305)||(9293429-9293474)
chr2 (260-305)||(13355014-13355059)
chr2 (267-318)||(31174696-31174746)
chr2 (260-305)||(16767316-16767361)
chr2 (260-291)||(43331092-43331123)
chr2 (260-305)||(9723572-9723617)
[»] chr1 (16 HSPs)
chr1 (260-318)||(36966562-36966620)
chr1 (260-318)||(37821688-37821746)
chr1 (260-318)||(41876296-41876354)
chr1 (260-318)||(51737658-51737716)
chr1 (264-318)||(6883640-6883694)
chr1 (260-318)||(19015557-19015615)
chr1 (260-318)||(25463829-25463887)
chr1 (260-318)||(40215141-40215199)
chr1 (260-318)||(44094851-44094908)
chr1 (260-305)||(3559783-3559828)
chr1 (260-305)||(18404614-18404659)
chr1 (260-305)||(20304984-20305029)
chr1 (260-305)||(25973573-25973618)
chr1 (260-305)||(9910145-9910190)
chr1 (260-305)||(10167565-10167610)
chr1 (260-305)||(44690876-44690921)
[»] scaffold0471 (1 HSPs)
scaffold0471 (260-318)||(12995-13053)
[»] scaffold0204 (1 HSPs)
scaffold0204 (260-318)||(4549-4607)
[»] scaffold0178 (1 HSPs)
scaffold0178 (260-318)||(11774-11832)
[»] chr6 (15 HSPs)
chr6 (260-318)||(17175875-17175933)
chr6 (260-330)||(18889498-18889567)
chr6 (260-318)||(32702358-32702416)
chr6 (260-318)||(18365428-18365485)
chr6 (260-318)||(18370692-18370749)
chr6 (260-305)||(33695180-33695225)
chr6 (260-305)||(33696863-33696908)
chr6 (260-311)||(23290935-23290986)
chr6 (260-318)||(2309277-2309335)
chr6 (260-305)||(6031594-6031639)
chr6 (260-318)||(6127429-6127488)
chr6 (260-318)||(28675301-28675359)
chr6 (275-318)||(25987083-25987126)
chr6 (269-318)||(9752109-9752157)
chr6 (260-305)||(17705323-17705367)
[»] scaffold0096 (1 HSPs)
scaffold0096 (260-318)||(41164-41221)
[»] scaffold0085 (1 HSPs)
scaffold0085 (260-305)||(48015-48060)
[»] scaffold0665 (1 HSPs)
scaffold0665 (282-332)||(3202-3252)


Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 15 - 265
Target Start/End: Original strand, 31597367 - 31597617
Alignment:
Q  15 tggacatcatcagacacagggatcattactggagacatctctgaaaacatcttgtatcattggaaaggtttcttccgaggctgtcattaacgcaaaaagg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  31597367 tggacatcatcagacacagggatcattactggagacatctctgaaaacatcttgtatcattggaaaggtttcttccgaggctgtcattgacgcaagaagg 31597466  T
Q  115 tcacaaagcaagtcagttttaacttggtttagcattaaatgggacaagattttgctggaaatacagctttggaaaatgcagatgttcctgtggcttttac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31597467 tcacaaagcaagtcagttttaacttggtttagcattaaatgggacaagattttgctggaaatacagctttggaaaatgcagatgttcctgtggcttttac 31597566  T
Q  215 aagtgagaaaggcattgccttggtctcaccaagcatcataaagacataatc 265  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31597567 aagtgagaaaggcattgccttggtctcaccgagcatcataaagacataatc 31597617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 34482742 - 34482800
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34482742 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 34482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 37522264 - 37522206
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37522264 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 37522206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 332
Target Start/End: Original strand, 37216907 - 37216979
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataaatccgaccacccta 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  || |||||||||    
T  37216907 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccacccta 37216979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 3137268 - 3137326
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  3137268 ataatcacctttagatttcagtctcatttattaatctttcatacaaaaaagatacataa 3137326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 3574380 - 3574438
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3574380 ataatcacctctagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 3574438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 19650754 - 19650811
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  19650754 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 19650811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 3089630 - 3089585
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3089630 ataatcacctttagatttcagtctcatttattaatctttcataaaa 3089585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 3456274 - 3456217
Alignment:
Q  261 taatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3456274 taatcatctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 3456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 8320436 - 8320481
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8320436 ataatcacctttagatttcagtctcatttattaatctttcataaaa 8320481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 30385611 - 30385566
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30385611 ataatcacctttagatttcagtctcatttattaatctttcataaaa 30385566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 22426199 - 22426256
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  22426199 ataatcacatttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 22426256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 2754930 - 2754885
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  2754930 ataatcacctttaaatttcagtctcatttattaatctttcataaaa 2754885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 6042088 - 6042043
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6042088 ataatcacctttagatttcagtctcatttattaatttttcataaaa 6042043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 33114005 - 33113960
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  33114005 ataatcacctttagatttcaatctcatttattaatctttcataaaa 33113960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 48161117 - 48161072
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  48161117 ataatcacctttagatttcagtctcatttattaatttttcataaaa 48161072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 26612957 - 26612912
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||    
T  26612957 ataatcacccttagatttcagtctcatttattaacctttcataaaa 26612912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 33145923 - 33145866
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacata 317  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||| ||| |||||||    
T  33145923 ataatcacccttagatttcagtcttatttattaacctttcataaaaaaaaaatacata 33145866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 42921334 - 42921278
Alignment:
Q  262 aatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||| ||| ||||||||    
T  42921334 aatcacccttaaatttcagtctcatttattaacctttcataaaaaaaaaatacataa 42921278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 11347476 - 11347435
Alignment:
Q  264 tcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  11347476 tcacctttagatttcaatctcatttattaatttttcataaaa 11347435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 33839746 - 33839701
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||||    
T  33839746 ataatcacccttaaatttcagtctcatttattaacctttcataaaa 33839701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 42298073 - 42298028
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||    
T  42298073 ataaccacccttagatttcagtctcatttattaacctttcataaaa 42298028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 47738322 - 47738277
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||    
T  47738322 ataatcatccttagatttcagtctcatttattaacctttcataaaa 47738277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 36864887 - 36864929
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcata 302  Q
    ||||||||| ||||||||||||||||||||||||  |||||||    
T  36864887 ataatcacccttagatttcagtctcatttattaacatttcata 36864929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 24343760 - 24343715
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| |||||||||||||| ||||||||| |||||| ||||    
T  24343760 ataatcacccttagatttcagtcttatttattaacctttcaaaaaa 24343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 46919105 - 46919061
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaa 304  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||    
T  46919105 ataatcacctctagatttcggtcttatttattaatctatcataaa 46919061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 26147 - 26089
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26147 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 26089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 16195 - 16137
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16195 ataatcatctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 16137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 8605 - 8555
Alignment:
Q  268 ctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8605 ctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 3596895 - 3596953
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3596895 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 3596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 17841704 - 17841762
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17841704 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 17841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 25581093 - 25581151
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25581093 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 25581151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 26041967 - 26042025
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26041967 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 26042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 40779983 - 40780041
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40779983 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 40780041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 14129070 - 14128998
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataaatccgaccacccta 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  || |||||||||    
T  14129070 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataacacccaccacccta 14128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 6108087 - 6108145
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6108087 ataatcacctttagatttcagtctcatttattaatctttcataaaaagaagatacataa 6108145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 8454044 - 8453987
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8454044 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaagatacataa 8453987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 42754896 - 42754954
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  42754896 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 42754954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 32064957 - 32064898
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  32064957 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataa 32064898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 15187771 - 15187714
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  15187771 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 15187714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 32394068 - 32394011
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  32394068 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 32394011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 1645818 - 1645863
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1645818 ataatcacctttagatttcagtctcatttattaatctttcataaaa 1645863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 24211226 - 24211271
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24211226 ataatcacctttagatttcagtctcatttattaatctttcataaaa 24211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 20091655 - 20091713
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  20091655 ataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataa 20091713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 35353252 - 35353194
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||||    
T  35353252 ataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagatacataa 35353194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 37985910 - 37985967
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  37985910 ataatcacctttagatttcagtcccatttattaatctttcataaaa-aaaaatacataa 37985967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 39772656 - 39772714
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||    
T  39772656 ataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaatacataa 39772714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 10044559 - 10044514
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  10044559 ataatcacctttagatttcaatctcatttattaatctttcataaaa 10044514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 30055727 - 30055669
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||| ||| ||||||||    
T  30055727 ataatcacccttagattttagtctcatttattaacctttcataaaaaaaaaatacataa 30055669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 34665592 - 34665535
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  34665592 ataatcacccttagatttcagtctcatttattaacctttcataaaa-aaaaatacataa 34665535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 295
Target Start/End: Original strand, 1503697 - 1503732
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatc 295  Q
    ||||||||||||||||||||||||||||||||||||    
T  1503697 ataatcacctttagatttcagtctcatttattaatc 1503732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 38017137 - 38017098
Alignment:
Q  266 acctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  38017137 acctttagatttcagtctcatttattaatctttcaaaaaa 38017098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 41819622 - 41819667
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||    
T  41819622 ataatcacccttagatttcagtctcatttattaacctatcataaaa 41819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 27835307 - 27835365
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| | |||||||||| ||||||||||||| |||| |||||| ||| ||||||||    
T  27835307 ataatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataa 27835365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 289
Target Start/End: Original strand, 31347630 - 31347659
Alignment:
Q  260 ataatcacctttagatttcagtctcattta 289  Q
    ||||||||||||||||||||||||||||||    
T  31347630 ataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 37132535 - 37132580
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| |||||||||||||| ||||||||| |||||| ||||    
T  37132535 ataatcacccttagatttcagtcttatttattaacctttcaaaaaa 37132580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 35445608 - 35445550
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35445608 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 35445550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 30848780 - 30848722
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  30848780 ataatcacctttaaatttcagtctcatttattaatctttcataaaaaaaagatacataa 30848722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 3962189 - 3962132
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3962189 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 3962132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 42612022 - 42611964
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  42612022 ataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaaatacataa 42611964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 45637922 - 45637865
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  45637922 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 45637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 48880781 - 48880839
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  48880781 ataatcacatttagatttcagtttcatttattaatctttcataaaaaaaagatacataa 48880839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 24395182 - 24395137
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24395182 ataatcacctttagatttcagtctcatttattaatctttcataaaa 24395137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 35876455 - 35876410
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35876455 ataatcacctttagatttcagtctcatttattaatctttcataaaa 35876410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 4974589 - 4974647
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  4974589 ataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataa 4974647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 15329485 - 15329440
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  15329485 ataatcacttttagatttcagtctcatttattaatctttcataaaa 15329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 15577701 - 15577746
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15577701 ataatcacctttagatttcagtctcatttattaatcttttataaaa 15577746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 34483049 - 34483004
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  34483049 ataatcacctttagatttcaatctcatttattaatctttcataaaa 34483004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 42696294 - 42696236
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||||||    
T  42696294 ataatcacccttagatttcagtctcatttattaacttttcataaaaaaaaaatacataa 42696236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 29737355 - 29737313
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcata 302  Q
    ||||||||| |||||||||||||||||||||||| ||||||||    
T  29737355 ataatcacccttagatttcagtctcatttattaacctttcata 29737313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 25398449 - 25398391
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25398449 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 25398391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 33584183 - 33584241
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33584183 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 33584241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 3521861 - 3521918
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3521861 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaagatacataa 3521918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 4892413 - 4892355
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  4892413 ataatcacctttagatttcagtctcatttattaatctttcattaaaagaagatacataa 4892355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 6043366 - 6043423
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6043366 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 6043423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 8145584 - 8145527
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  8145584 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 8145527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 37321647 - 37321705
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  37321647 ataatcacctttagatttcagtctcatttattaatctttcataaataaaaaatacataa 37321705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 38899580 - 38899638
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38899580 ataaccacctttagatttcagtctcatttattaatctttcataaaaaaaagatatataa 38899638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 2477844 - 2477789
Alignment:
Q  263 atcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  2477844 atcacctttagatttcagtcttatttattaatctttcataaaaaaaaaatacataa 2477789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 3362990 - 3362931
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataa 318  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  3362990 ataaccacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataa 3362931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 4433862 - 4433919
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  4433862 ataatcacctttagatttcagtcttatttattaatctttcataaaa-aaaaatacataa 4433919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 14138878 - 14138821
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  14138878 ataatcacctttagatttcaatctcatttattaatctttcataaaa-aaaaatacataa 14138821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 12614592 - 12614637
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  12614592 ataatcacctttagatttcagtctcatttattaacctttcataaaa 12614637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 12851013 - 12850968
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  12851013 ataaccacctttagatttcagtctcatttattaatctttcataaaa 12850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 11360985 - 11361043
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| || ||| ||||||||    
T  11360985 ataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataa 11361043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 13664770 - 13664713
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||| |||||||||| ||| |||||| ||| ||||||||    
T  13664770 ataatcacccttagatttcagtcttatttattaatgttttataaaa-aaaaatacataa 13664713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 44893067 - 44893125
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44893067 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 44893125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 44893637 - 44893579
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44893637 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 44893579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 46442055 - 46441997
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46442055 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 46441997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 2625048 - 2624990
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  2625048 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 2624990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 24128450 - 24128392
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24128450 ataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 24128392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 36073560 - 36073503
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36073560 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaagatacataa 36073503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 47290277 - 47290219
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  47290277 ataatcacctttagatttcagtctcatttattattctttcataaaaaaaagatacataa 47290219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 49387741 - 49387800
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  49387741 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataa 49387800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 9089081 - 9089023
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  9089081 ataatcatctttagatttcagtctcatttattaatctttcatacaaaaaagatacataa 9089023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 22199470 - 22199413
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  22199470 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 22199413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 31078673 - 31078731
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  31078673 ataatcatctttagatttcaatctcatttattaatctttcataaaaaaaagatacataa 31078731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 50156433 - 50156490
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50156433 ataatcacctt-agatttcagtctcatttattaatctttcataaaaaaaagatacataa 50156490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 53123242 - 53123184
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  53123242 ataatcatctttagatttcagtctcatttattaatctttcatacaaaaaagatacataa 53123184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 7744966 - 7745024
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||    
T  7744966 ataatcacctttagatttcaatctcatttattaatatttcataaaaaaaaaatacataa 7745024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 21802174 - 21802231
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  21802174 ataatcacccttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 21802231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 4751658 - 4751613
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  4751658 ataaccacctttagatttcagtctcatttattaatctttcataaaa 4751613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 33530538 - 33530583
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  33530538 ataatcacctttagatttcagtcttatttattaatctttcataaaa 33530583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 36073162 - 36073117
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  36073162 ataaccacctttagatttcagtctcatttattaatctttcataaaa 36073117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 17655641 - 17655596
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||    
T  17655641 ataattacctttagatttcagtctcatttattaacctttcataaaa 17655596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 23964318 - 23964363
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  23964318 ataatcatctttagatttcaatctcatttattaatctttcataaaa 23964363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 10442641 - 10442687
Alignment:
Q  260 ataatcacctttagatttcagtctcattta-ttaatctttcataaaa 305  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  10442641 ataatcacctttagatttcagtctcatttatttaatctttcaaaaaa 10442687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 30563420 - 30563362
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||  |||||||||||||| ||||||||| ||||||||||| ||| ||||||||    
T  30563420 ataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataa 30563362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 37934796 - 37934853
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||||| ||| ||||||||    
T  37934796 ataatcacccttagatttcaatctcatttattaacctttcataaaa-aaaaatacataa 37934853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 7475362 - 7475420
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7475362 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 7475420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 23267916 - 23267974
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23267916 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 23267974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 33380418 - 33380360
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  33380418 ataatcacctttagatttcagtctcatttattaatctttcattaaaaaaagatacataa 33380360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 10662099 - 10662026
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcat-aaaagaaagatacataaatccgaccacccta 332  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  || |||||||||    
T  10662099 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaagatacataacacccaccacccta 10662026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 3989287 - 3989229
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3989287 ataataacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 3989229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 21936293 - 21936235
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  21936293 ataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataa 21936235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 35160970 - 35160925
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35160970 ataatcacctttagatttcagtctcatttattaatctttcataaaa 35160925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 9293429 - 9293474
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  9293429 ataatcacccttagatttcagtctcatttattaatctttcataaaa 9293474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 13355059 - 13355014
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  13355059 ataatcacttttagatttcagtctcatttattaatctttcataaaa 13355014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 31174696 - 31174746
Alignment:
Q  267 cctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  31174696 cctttagatttcaatctcatttattaatctttcataaaa-aaaaatacataa 31174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 16767316 - 16767361
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||    
T  16767316 ataatcactcttagatttcagtctcatttattaacctttcataaaa 16767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 291
Target Start/End: Complemental strand, 43331123 - 43331092
Alignment:
Q  260 ataatcacctttagatttcagtctcatttatt 291  Q
    ||||||||||||||||||||||||||||||||    
T  43331123 ataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 9723617 - 9723572
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||||    
T  9723617 ataatcacctttagatttcagtcttatttattcacttttcataaaa 9723572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 36966562 - 36966620
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36966562 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 36966620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 37821688 - 37821746
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37821688 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 37821746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 41876296 - 41876354
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41876296 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 41876354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 51737716 - 51737658
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51737716 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 51737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 6883694 - 6883640
Alignment:
Q  264 tcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6883694 tcacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 6883640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 19015615 - 19015557
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  19015615 ataatcacctttagatttcagtctcatttattaatctttcatacaaaaaagatacataa 19015557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 25463887 - 25463829
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  25463887 ataatcacctttagatttaagtctcatttattaatctttcataaaaaaaaaatacataa 25463829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 40215199 - 40215141
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  40215199 ataatcacctttagatttcagtctcatttattaatatttcataaaaaaaaaatacataa 40215141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 44094908 - 44094851
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  44094908 ataatcacctttagatttcagtctcatttattaatctttcat-aaagaaaaatacataa 44094851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 3559828 - 3559783
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  3559828 ataatcacctttatatttcagtctcatttattaatctttcataaaa 3559783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 18404659 - 18404614
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  18404659 ataatcacatttagatttcagtctcatttattaatctttcataaaa 18404614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 20304984 - 20305029
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  20304984 ataatcacctttagatttcagtctcatttatcaatctttcataaaa 20305029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 25973618 - 25973573
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25973618 ataatcacctttaaatttcagtctcatttattaatctttcataaaa 25973573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 9910145 - 9910190
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  9910145 ataatcacctttagatttcagacttatttattaatctttcataaaa 9910190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 10167610 - 10167565
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  10167610 ataatcacctttagatttcagtcttatttattaatttttcataaaa 10167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 44690876 - 44690921
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||| ||||||| |||||| |||||||||||||| ||||||    
T  44690876 ataatcacccttagattccagtcttatttattaatcttttataaaa 44690921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 13053 - 12995
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13053 ataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 12995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 4607 - 4549
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  4607 ataatcacctttagatttcagtctcatttattaatctttcataaaaaacagatacataa 4549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 11832 - 11774
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  11832 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 11774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 17175875 - 17175933
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  17175875 ataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaaatacataa 17175933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 330
Target Start/End: Original strand, 18889498 - 18889567
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataaatccgaccaccc 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||    
T  18889498 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataaaacccaccaccc 18889567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 32702416 - 32702358
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32702416 ataattacctttagatttcagtctcatttattaatctttcataaaaaaaagatacataa 32702358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 18365428 - 18365485
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18365428 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 18365485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 18370692 - 18370749
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18370692 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 18370749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 33695180 - 33695225
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33695180 ataatcacctttagatttcagtctcatttattaatctttcataaaa 33695225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 33696908 - 33696863
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33696908 ataatcacctttagatttcagtctcatttattaatctttcataaaa 33696863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 23290935 - 23290986
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaaga 311  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23290935 ataattacctttagatttcagtctcatttattaatctttcataaaaaaaaga 23290986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 2309277 - 2309335
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  2309277 ataatcacccttagatttcagtctcatttattaacctttcataaaaaaaaaatacataa 2309335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 6031594 - 6031639
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6031594 ataatcacctttagatttcagtctcatttattaatcttttataaaa 6031639  T

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Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 6127488 - 6127429
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcata-aaagaaagatacataa 318  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  6127488 ataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataa 6127429  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 28675359 - 28675301
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  28675359 ataatcacccttagatttcagtctcatttattaacctttcataaataaaaaatacataa 28675301  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 25987126 - 25987083
Alignment:
Q  275 tttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  25987126 tttcagtctcatttactaatctttcataaaaaaaagatacataa 25987083  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 9752109 - 9752157
Alignment:
Q  269 tttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcataaaa-aaaaatacataa 9752157  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 17705323 - 17705367
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||    
T  17705323 ataatcacctt-agatttcagtctcatttattaacctttcataaaa 17705367  T

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Target: scaffold0096 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 41221 - 41164
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaagaaagatacataa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  41221 ataatcacctttagatttcagtctcatttattaatctttcataaaa-aaaaatacataa 41164  T

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Target: scaffold0085 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 48060 - 48015
Alignment:
Q  260 ataatcacctttagatttcagtctcatttattaatctttcataaaa 305  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  48060 ataatcatctttagatttcagtctcatttattaatctttcataaaa 48015  T

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Target: scaffold0665 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 3252 - 3202
Alignment:
Q  282 ctcatttattaatctttcataaaagaaagatacataaatccgaccacccta 332  Q
    |||||||||||||||||||||||| ||| ||||||||  || |||||||||    
T  3252 ctcatttattaatctttcataaaaaaaaaatacataacacccaccacccta 3202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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