View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0927_high_6 (Length: 453)

Name: NF0927_high_6
Description: NF0927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0927_high_6
NF0927_high_6
[»] chr6 (18 HSPs)
chr6 (30-445)||(17168850-17169267)
chr6 (51-256)||(17150489-17150694)
chr6 (34-254)||(17137190-17137410)
chr6 (356-433)||(2140495-2140572)
chr6 (368-408)||(13211307-13211347)
chr6 (360-414)||(6299499-6299553)
chr6 (360-414)||(6306309-6306363)
chr6 (360-433)||(5970126-5970199)
chr6 (360-435)||(10031536-10031611)
chr6 (360-435)||(19602199-19602274)
chr6 (371-408)||(10760870-10760907)
chr6 (361-414)||(17422274-17422327)
chr6 (360-393)||(28715303-28715336)
chr6 (360-408)||(9024194-9024242)
chr6 (364-408)||(15443688-15443732)
chr6 (346-394)||(29049892-29049940)
chr6 (360-408)||(33001307-33001355)
chr6 (360-396)||(34541768-34541804)
[»] chr5 (26 HSPs)
chr5 (360-419)||(11596473-11596532)
chr5 (357-414)||(13287414-13287471)
chr5 (360-404)||(38749581-38749625)
chr5 (360-435)||(31084289-31084364)
chr5 (360-408)||(8420020-8420068)
chr5 (361-413)||(16864006-16864058)
chr5 (360-419)||(2039867-2039926)
chr5 (360-395)||(4344748-4344783)
chr5 (360-395)||(24906319-24906354)
chr5 (361-404)||(28296325-28296368)
chr5 (360-395)||(39342460-39342495)
chr5 (364-415)||(41600884-41600935)
chr5 (356-394)||(9449476-9449514)
chr5 (360-394)||(16881143-16881177)
chr5 (360-402)||(18607115-18607157)
chr5 (360-408)||(38866446-38866495)
chr5 (378-414)||(2321917-2321953)
chr5 (368-404)||(4344868-4344904)
chr5 (350-394)||(5399927-5399970)
chr5 (364-396)||(16434404-16434436)
chr5 (360-408)||(25863197-25863245)
chr5 (282-310)||(26312845-26312873)
chr5 (360-404)||(30080519-30080563)
chr5 (361-401)||(32428945-32428985)
chr5 (360-396)||(39651224-39651260)
chr5 (360-404)||(43001797-43001841)
[»] chr4 (22 HSPs)
chr4 (360-414)||(10546135-10546189)
chr4 (360-413)||(5654609-5654662)
chr4 (360-408)||(15969346-15969394)
chr4 (360-436)||(56049842-56049917)
chr4 (360-395)||(18513259-18513294)
chr4 (352-391)||(26276019-26276058)
chr4 (363-401)||(43188612-43188650)
chr4 (282-311)||(3947716-3947745)
chr4 (363-408)||(8820401-8820446)
chr4 (366-430)||(9996813-9996875)
chr4 (362-407)||(10634984-10635029)
chr4 (360-414)||(12310800-12310856)
chr4 (360-393)||(14465093-14465126)
chr4 (360-401)||(19230327-19230368)
chr4 (360-393)||(21945511-21945544)
chr4 (343-391)||(2234260-2234308)
chr4 (360-400)||(5176985-5177025)
chr4 (358-430)||(12163819-12163891)
chr4 (360-408)||(20743296-20743344)
chr4 (360-432)||(31243566-31243638)
chr4 (360-404)||(31552475-31552519)
chr4 (355-395)||(32910557-32910597)
[»] chr3 (13 HSPs)
chr3 (360-438)||(20691282-20691360)
chr3 (360-408)||(41319328-41319376)
chr3 (360-395)||(12704675-12704710)
chr3 (360-396)||(11093575-11093611)
chr3 (344-402)||(2408657-2408714)
chr3 (364-414)||(25908861-25908911)
chr3 (360-402)||(52369774-52369816)
chr3 (352-401)||(11251978-11252027)
chr3 (360-433)||(21479086-21479159)
chr3 (360-408)||(5339101-5339149)
chr3 (363-395)||(9210846-9210878)
chr3 (360-392)||(20503474-20503506)
chr3 (360-408)||(28917994-28918042)
[»] chr1 (16 HSPs)
chr1 (360-433)||(38078679-38078753)
chr1 (360-409)||(7988469-7988518)
chr1 (360-393)||(30847738-30847771)
chr1 (360-408)||(3921660-3921708)
chr1 (360-395)||(11571591-11571626)
chr1 (360-419)||(24462288-24462347)
chr1 (360-395)||(40747791-40747826)
chr1 (356-393)||(17754319-17754356)
chr1 (360-396)||(498415-498450)
chr1 (282-310)||(7918169-7918197)
chr1 (360-408)||(22794096-22794144)
chr1 (360-408)||(26462663-26462711)
chr1 (360-408)||(40686776-40686824)
chr1 (359-395)||(42325566-42325602)
chr1 (360-400)||(42386415-42386454)
chr1 (359-419)||(43328449-43328509)
[»] chr2 (16 HSPs)
chr2 (356-395)||(30563415-30563454)
chr2 (360-395)||(18570978-18571013)
chr2 (365-404)||(25317134-25317173)
chr2 (360-395)||(40681988-40682023)
chr2 (352-402)||(4332925-4332975)
chr2 (360-406)||(19613631-19613677)
chr2 (360-433)||(21374717-21374791)
chr2 (368-402)||(24011035-24011069)
chr2 (361-406)||(9626937-9626981)
chr2 (360-401)||(10250726-10250767)
chr2 (360-393)||(12668441-12668474)
chr2 (365-394)||(24894492-24894521)
chr2 (360-432)||(12748653-12748725)
chr2 (360-408)||(30298465-30298513)
chr2 (360-408)||(37497113-37497161)
chr2 (360-408)||(41047867-41047915)
[»] chr7 (23 HSPs)
chr7 (360-402)||(28943432-28943474)
chr7 (359-397)||(30606081-30606119)
chr7 (334-397)||(44172880-44172945)
chr7 (359-395)||(44020981-44021017)
chr7 (346-393)||(11700811-11700858)
chr7 (377-432)||(21365135-21365190)
chr7 (360-395)||(38134424-38134459)
chr7 (360-426)||(23948367-23948433)
chr7 (360-401)||(36013816-36013858)
chr7 (360-393)||(7438714-7438747)
chr7 (360-393)||(35861972-35862005)
chr7 (360-409)||(44317304-44317353)
chr7 (360-408)||(1885566-1885614)
chr7 (348-408)||(1934944-1935004)
chr7 (360-388)||(7241012-7241040)
chr7 (364-408)||(9050155-9050199)
chr7 (363-395)||(9783397-9783429)
chr7 (343-415)||(11072284-11072356)
chr7 (360-392)||(19930959-19930991)
chr7 (360-396)||(21247754-21247790)
chr7 (360-392)||(27980805-27980837)
chr7 (360-408)||(30516375-30516423)
chr7 (282-322)||(38134350-38134390)
[»] chr8 (16 HSPs)
chr8 (363-408)||(5307054-5307098)
chr8 (345-393)||(6211442-6211488)
chr8 (361-408)||(34739080-34739127)
chr8 (334-392)||(9382981-9383039)
chr8 (357-403)||(28745496-28745542)
chr8 (360-394)||(34201064-34201098)
chr8 (360-393)||(29198497-29198530)
chr8 (362-405)||(2925116-2925160)
chr8 (360-396)||(3508057-3508093)
chr8 (364-408)||(9936807-9936851)
chr8 (368-408)||(12936517-12936557)
chr8 (368-408)||(20873062-20873102)
chr8 (357-393)||(29447125-29447161)
chr8 (360-408)||(31236595-31236643)
chr8 (359-415)||(33697158-33697214)
chr8 (357-393)||(41831955-41831991)
[»] scaffold1528 (1 HSPs)
scaffold1528 (356-393)||(1043-1080)
[»] scaffold0571 (1 HSPs)
scaffold0571 (363-396)||(7695-7728)
[»] scaffold0598 (1 HSPs)
scaffold0598 (360-408)||(8071-8119)
[»] scaffold0037 (1 HSPs)
scaffold0037 (360-400)||(102906-102946)
[»] scaffold0024 (1 HSPs)
scaffold0024 (360-432)||(18126-18198)
[»] scaffold0007 (1 HSPs)
scaffold0007 (360-408)||(225286-225334)


Alignment Details
Target: chr6 (Bit Score: 383; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 30 - 445
Target Start/End: Complemental strand, 17169267 - 17168850
Alignment:
Q  30 ggatattttctattgcattggtaatctatgccattggttggtgtaaagaaggatggaatggattgtcttggatggcatttagagaattatgggaatttac 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17169267 ggatattttctattgcattggtaatctatgccattggttggtgtaaagaaggatggaatggattgtcttggatggcatttagagaattatgggaatttac 17169168  T
Q  130 caaacttagttttggttcatctgtaatgatctgtttagaacaatggtatactgcttgcattatacttcttgctgggcatcttgataatcctgtgattgct 229  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17169167 caaacttagtcttggttcatctgtaatgatctgtttagaacaatggtatactgcttgcattatacttcttgctggtcatcttgataatcctgtgattgct 17169068  T
Q  230 gttggttccttttcgatttggtaagaataagatgataagctacgaatcacatactcctcggattaggtgtgtcctggtgtcgaatacttatcgtgtttga 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17169067 gttggttccttttcgatttggtaagaataagatgataagctacgaaacacatactcctcggattaggtgtgtcctggtgtcgaatacttatcatgtttga 17168968  T
Q  330 tacagacaccaatacgacacaaacac--atagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtc 427  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17168967 tacagacaccaatacgacacaaacacatatagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtcgtgttcggtgtc 17168868  T
Q  428 cgtgtctgaatctctgct 445  Q
    ||||||||||||| ||||    
T  17168867 cgtgtctgaatctgtgct 17168850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 51 - 256
Target Start/End: Complemental strand, 17150694 - 17150489
Alignment:
Q  51 taatctatgccattggttggtgtaaagaaggatggaatggattgtcttggatggcatttagagaattatgggaatttaccaaacttagttttggttcatc 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  17150694 taatttatgccattggttggtgtaaagaaggatggaatggattgtcttggatggcatttagagaattatgggaatttactaagctaagttttggttcatc 17150595  T
Q  151 tgtaatgatctgtttagaacaatggtatactgcttgcattatacttcttgctgggcatcttgataatcctgtgattgctgttggttccttttcgatttgg 250  Q
    ||||||||| ||||||||||| ||||||||| |   |||||| |||||||||||  ||||||||||||||||||||||| ||||||| | ||| ||||||    
T  17150594 tgtaatgatttgtttagaacagtggtatactacaatcattatccttcttgctggctatcttgataatcctgtgattgctcttggttcatattcaatttgg 17150495  T
Q  251 taagaa 256  Q
    ||||||    
T  17150494 taagaa 17150489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 34 - 254
Target Start/End: Complemental strand, 17137410 - 17137190
Alignment:
Q  34 attttctattgcattggtaatctatgccattggttggtgtaaagaaggatggaatggattgtcttggatggcatttagagaattatgggaatttaccaaa 133  Q
    ||||||||||||  | ||||| |||| |||||||||||  |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | |    
T  17137410 attttctattgctctagtaatttatgtcattggttggtccaaagaaggatggaatggattatcttggatggcatttagggaactatgggaatttacaata 17137311  T
Q  134 cttagttttggttcatctgtaatgatctgtttagaacaatggtatactgcttgcattatacttcttgctgggcatcttgataatcctgtgattgctgttg 233  Q
    || ||| |||||||||||| |||||| ||||||||||| ||||||| || ||||||||| ||||||||||| || ||||||||||||||||||||| |||    
T  17137310 ctaagtcttggttcatctggaatgatttgtttagaacagtggtatagtgtttgcattatccttcttgctggtcaccttgataatcctgtgattgctcttg 17137211  T
Q  234 gttccttttcgatttggtaag 254  Q
    |||||| ||| ||||||||||    
T  17137210 gttcctattcaatttggtaag 17137190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 356 - 433
Target Start/End: Original strand, 2140495 - 2140572
Alignment:
Q  356 atagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtc 433  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| || ||||||||||||    
T  2140495 atagttacattgaattatgtcattttctcaaattattatcaatgtcgatgtatttgtgttgtatttggtgtccgtgtc 2140572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 13211307 - 13211347
Alignment:
Q  368 aattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  13211307 aattatgtcattttctcaaattattatcaatgtcgacgtgt 13211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 6299553 - 6299499
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| |||||| ||||    
T  6299553 ttacattgaattatatcattttctcaaattattatccatgtcggcgtgttggtgt 6299499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 6306363 - 6306309
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| |||||| ||||    
T  6306363 ttacattgaattatatcattttctcaaattattatccatgtcggcgtgttggtgt 6306309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 5970126 - 5970199
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtc 433  Q
    ||||| |||||||||| ||||||||||||||||| |  |||||||||||  ||||  ||| |||||||||||||    
T  5970126 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtcatgtccggtgtccgtgtc 5970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 10031611 - 10031536
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtctg 435  Q
    |||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||  |||  ||| ||||||||||    
T  10031611 ttacattgaattatgtcattttctcaaaattttatcggtgtcaacgtgtttgtgtcatgtctggtatccgtgtctg 10031536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 19602199 - 19602274
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtctg 435  Q
    ||||| |||||||| ||||||| |||||||||||||| ||| |  ||||  ||||||||| |||||||| ||||||    
T  19602199 ttacactgaattatatcattttctcaaattattatcagtgttggtgtgtccgtgttgtgtccggtgtccatgtctg 19602274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 408
Target Start/End: Original strand, 10760870 - 10760907
Alignment:
Q  371 tatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgt 10760907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 17422274 - 17422327
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||||| |||||| ||||||| |||||||||||||  |||||||||||| ||||    
T  17422274 tacattcaattatatcattttctcaaattattatcggtgtcgacgtgttagtgt 17422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 28715336 - 28715303
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    ||||| ||||||||||||||||||||||||||||    
T  28715336 ttacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 9024194 - 9024242
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||||| ||||||||| ||   |||||||||||    
T  9024194 ttacattgaattatgtcattttctcaaattatcatttgtgtcgacgtgt 9024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 15443732 - 15443688
Alignment:
Q  364 attgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||| ||||| ||||||||||||  ||||||||||||    
T  15443732 attgaattatgttattttctcaaattattattgatgtcgacgtgt 15443688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 29049940 - 29049892
Alignment:
Q  346 acacaaacacatagttacattgaattatgtcattttttcaaattattat 394  Q
    |||| |||||||  |||||||||||||||| ||||| ||||||||||||    
T  29049940 acaccaacacatgattacattgaattatgtaattttctcaaattattat 29049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 33001307 - 33001355
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||| |||||||| ||||||||||||||||| || ||||| |||||    
T  33001307 ttacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 34541768 - 34541804
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    |||||||||||| |||||||||||| |||||||||||    
T  34541768 ttacattgaattttgtcattttttctaattattatca 34541804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 11596473 - 11596532
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgt 419  Q
    |||||||||||||||||||||| |||||||||||||  | |||||||||||||| |||||    
T  11596473 ttacattgaattatgtcattttctcaaattattatcggtatcgacgtgtttgtgctgtgt 11596532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 13287414 - 13287471
Alignment:
Q  357 tagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||||||| |||||||||| |||||||||||||||||||  |||||||||||| ||||    
T  13287414 tagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgt 13287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 38749581 - 38749625
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  38749581 ttacattgaattatgtcattttttcaaattattatcggtgtcgac 38749625  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 31084364 - 31084289
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtctg 435  Q
    |||||||||||||||| ||||||||||||||||| |  ||||| |||||  |||| |||| |||||||| ||||||    
T  31084364 ttacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccatgtctg 31084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 8420068 - 8420020
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||| ||||||||||||||||| | |||||| |||||    
T  8420068 ttacattgaattatgttattttttcaaattattagctatgtcggcgtgt 8420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 16864058 - 16864006
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtg 413  Q
    ||||||||||||||||||||| ||  ||||||||||||||| |||||| ||||    
T  16864058 tacattgaattatgtcattttctcgcattattatcaatgtcaacgtgtctgtg 16864006  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 2039867 - 2039926
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgt 419  Q
    ||||||||||| |||||||||| ||||||||||| |  |||||||||||  |||||||||    
T  2039867 ttacattgaatcatgtcattttctcaaattattaccggtgtcgacgtgtccgtgttgtgt 2039926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 4344783 - 4344748
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4344783 ttacactgaattatgtcattttttcaaattattatc 4344748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 24906319 - 24906354
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24906319 ttacactgaattatgtcattttttcaaattattatc 24906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 28296368 - 28296325
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    ||||||||||||||||||||| |||||||||||||  |||||||    
T  28296368 tacattgaattatgtcattttctcaaattattatcggtgtcgac 28296325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 39342495 - 39342460
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||| |||||||||||||||||    
T  39342495 ttacattgaattatgtcaatttttcaaattattatc 39342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 41600935 - 41600884
Alignment:
Q  364 attgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtt 415  Q
    |||||||| ||| ||||| |||||||||||||||||| |||||||| |||||    
T  41600935 attgaattgtgtaattttctcaaattattatcaatgttgacgtgttagtgtt 41600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 394
Target Start/End: Complemental strand, 9449514 - 9449476
Alignment:
Q  356 atagttacattgaattatgtcattttttcaaattattat 394  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  9449514 atagttacattgaattatgtgattttctcaaattattat 9449476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 394
Target Start/End: Complemental strand, 16881177 - 16881143
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattat 394  Q
    ||||||| |||||||||||||||||||||||||||    
T  16881177 ttacattaaattatgtcattttttcaaattattat 16881143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 18607115 - 18607157
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcg 402  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  18607115 ttacattgaattatgttattttctcaaattattatccatgtcg 18607157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 38866495 - 38866446
Alignment:
Q  360 ttacattgaattatgtcatt-ttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||| |||||||| |||||||  |||||||||||    
T  38866495 ttacattgaattatgtcatttttttcaaaatattatcggtgtcgacgtgt 38866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 414
Target Start/End: Complemental strand, 2321953 - 2321917
Alignment:
Q  378 ttttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  2321953 ttttctcaaattattatcaatgtcgacgtgttcgtgt 2321917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Complemental strand, 4344904 - 4344868
Alignment:
Q  368 aattatgtcattttttcaaattattatcaatgtcgac 404  Q
    ||||||||||||||||||||||||||| | |||||||    
T  4344904 aattatgtcattttttcaaattattattagtgtcgac 4344868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 394
Target Start/End: Complemental strand, 5399970 - 5399927
Alignment:
Q  350 aaacacatagttacattgaattatgtcattttttcaaattattat 394  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||    
T  5399970 aaacatataattacattgaattatgtcatttttt-aaattattat 5399927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 396
Target Start/End: Original strand, 16434404 - 16434436
Alignment:
Q  364 attgaattatgtcattttttcaaattattatca 396  Q
    |||||||||||| ||||||||||||||||||||    
T  16434404 attgaattatgttattttttcaaattattatca 16434436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 25863245 - 25863197
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| |||||||| ||||||| ||||||||||||  ||||||||||||    
T  25863245 ttacactgaattatatcattttctcaaattattatacatgtcgacgtgt 25863197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 310
Target Start/End: Complemental strand, 26312873 - 26312845
Alignment:
Q  282 actcctcggattaggtgtgtcctggtgtc 310  Q
    |||||||||||||||||||||||||||||    
T  26312873 actcctcggattaggtgtgtcctggtgtc 26312845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 30080519 - 30080563
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    |||||||||||||||||||||| ||||| | |||||| |||||||    
T  30080519 ttacattgaattatgtcattttctcaaaattttatcagtgtcgac 30080563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 32428945 - 32428985
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtc 401  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  32428945 tacattgaattatgtcactttctcaaattattatcagtgtc 32428985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 39651260 - 39651224
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    ||||||||||||||||||||||| | |||||||||||    
T  39651260 ttacattgaattatgtcatttttacgaattattatca 39651224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 43001841 - 43001797
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||    
T  43001841 ttacactgaattatgtaattttttcaaattattagcagtgtcgac 43001797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 10546189 - 10546135
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||    
T  10546189 ttacattgaattatgtcattttctcaaattattatcattgtcgacatgtctgtgt 10546135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 5654609 - 5654662
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtg 413  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||    
T  5654609 ttacattgaattatgtcattttctcaaattattatcagtgtcgacatgtctgtg 5654662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 15969394 - 15969346
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||| |||||||| ||||||| |||||||||||| |||||||||||    
T  15969394 ttacattaaattatgttattttttaaaattattatcagtgtcgacgtgt 15969346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 56049917 - 56049842
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtctga 436  Q
    |||||||||| |||||||||| | ||||||||||||  |||||| ||||  |||| |||| ||||||||||||||||    
T  56049917 ttacattgaactatgtcatttct-caaattattatcggtgtcgatgtgtccgtgtcgtgtccggtgtccgtgtctga 56049842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 18513259 - 18513294
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  18513259 ttacattgaattatgtcattttctcaaattattatc 18513294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 26276019 - 26276058
Alignment:
Q  352 acacatagttacattgaattatgtcattttttcaaattat 391  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  26276019 acacataattacattgaattatgtcattttctcaaattat 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 43188650 - 43188612
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatcaatgtc 401  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  43188650 cattgaattatgtcattttctcaaattattatcagtgtc 43188612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 311
Target Start/End: Original strand, 3947716 - 3947745
Alignment:
Q  282 actcctcggattaggtgtgtcctggtgtcg 311  Q
    ||||||||||||||||||||||||||||||    
T  3947716 actcctcggattaggtgtgtcctggtgtcg 3947745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 8820446 - 8820401
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||||||||| ||||| ||||||||||||| |||| |||||||    
T  8820446 cattgaattatgtgattttatcaaattattatcgatgttgacgtgt 8820401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 430
Target Start/End: Complemental strand, 9996875 - 9996813
Alignment:
Q  366 tgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgt 430  Q
    |||||||||| ||||| |||||||||| ||| |||||  |||| ||||| |||||||||||||||    
T  9996875 tgaattatgtgattttctcaaattattgtcagtgtcg--gtgtctgtgtcgtgttcggtgtccgt 9996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 407
Target Start/End: Complemental strand, 10635029 - 10634984
Alignment:
Q  362 acattgaattatgtcattttttcaaattattatcaatgtcgacgtg 407  Q
    |||||||||||||||||||||||||| | |||||| | ||||||||    
T  10635029 acattgaattatgtcattttttcaaaattttatcagtatcgacgtg 10634984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 12310856 - 12310800
Alignment:
Q  360 ttacattgaattatgtcattttttc--aaattattatcaatgtcgacgtgtttgtgt 414  Q
    ||||||||||||||| |||||||||  ||||||||||| ||||||| |||| |||||    
T  12310856 ttacattgaattatgccattttttctcaaattattatcgatgtcgatgtgtctgtgt 12310800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 14465093 - 14465126
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    |||||||||||||||| |||||||||||||||||    
T  14465093 ttacattgaattatgtgattttttcaaattatta 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 19230327 - 19230368
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtc 401  Q
    |||||||||||||||| ||||| ||||||||||||| |||||    
T  19230327 ttacattgaattatgttattttctcaaattattatctatgtc 19230368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 21945544 - 21945511
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    ||||| ||||||||||||||||||||||||||||    
T  21945544 ttacactgaattatgtcattttttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 2234308 - 2234260
Alignment:
Q  343 acgacacaaacacatagttacattgaattatgtcattttttcaaattat 391  Q
    |||||||  ||||||| |||||||||||||||| ||||| |||||||||    
T  2234308 acgacactgacacataattacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 5177025 - 5176985
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgt 400  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  5177025 ttacattgaattatgttattttctcaaaatattatcaatgt 5176985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 12163891 - 12163819
Alignment:
Q  358 agttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgt 430  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||  |  ||||  |||||||| ||||||||||    
T  12163891 agttacattcaattatgtcattttcacaaattattaacaatgttaatatgttaatgttgtgtccggtgtccgt 12163819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 20743296 - 20743344
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| |||||||||||||||| |||||||||||||  ||||| |||||    
T  20743296 ttacactgaattatgtcattttctcaaattattatccgtgtcggcgtgt 20743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 31243566 - 31243638
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgt 432  Q
    ||||| |||||||||||||||| |||||||||||| | |||||| |||  ||||| ||||   ||||||||||    
T  31243566 ttacactgaattatgtcattttctcaaattattataagtgtcgatgtgcctgtgtcgtgtcttgtgtccgtgt 31243638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 31552475 - 31552519
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    |||||||| ||||||||||||||| ||||||||||  ||||||||    
T  31552475 ttacattggattatgtcattttttgaaattattattgatgtcgac 31552519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 32910597 - 32910557
Alignment:
Q  355 catagttacattgaattatgtcattttttcaaattattatc 395  Q
    |||| ||||| |||||||||||||||| |||||||||||||    
T  32910597 cataattacactgaattatgtcattttctcaaattattatc 32910557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 20691360 - 20691282
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtctgaat 438  Q
    ||||| |||||||||||||||| |||||||||||||| | || ||||||  ||||||||| |||||||| ||| |||||    
T  20691360 ttacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgttgtgtccggtgtccatgtatgaat 20691282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 41319328 - 41319376
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||    
T  41319328 ttacattgaattatgtcattttttcaaattattattggtgtcgacgtgt 41319376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 12704675 - 12704710
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    ||||||||||||||||||||||||||||||||||||    
T  12704675 ttacattgaattatgtcattttttcaaattattatc 12704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 11093611 - 11093575
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    |||| ||||||||||||||||||||||||||||||||    
T  11093611 ttactttgaattatgtcattttttcaaattattatca 11093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 2408657 - 2408714
Alignment:
Q  344 cgacacaaacacatagttacattgaattatgtcattttttcaaattattatcaatgtcg 402  Q
    ||||||||| ||||| ||||||||||||||||  |||||||||||| ||||| ||||||    
T  2408657 cgacacaaa-acataattacattgaattatgtggttttttcaaatttttatcgatgtcg 2408714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 414
Target Start/End: Original strand, 25908861 - 25908911
Alignment:
Q  364 attgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 414  Q
    ||||||||||||||||||||||||||| ||||| | |||| ||||| ||||    
T  25908861 attgaattatgtcattttttcaaattactatcagtatcgaagtgttcgtgt 25908911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 52369816 - 52369774
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcg 402  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  52369816 ttacattgaattatgtaattttctcaaattattatccatgtcg 52369774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 11252027 - 11251978
Alignment:
Q  352 acacatagttacattgaattatgtcattttttcaaattattatcaatgtc 401  Q
    ||||||| ||||| |||||||||| ||||| ||||||||||| |||||||    
T  11252027 acacataattacactgaattatgtgattttctcaaattattagcaatgtc 11251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Complemental strand, 21479159 - 21479086
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgtc 433  Q
    ||||| |||||| ||| ||||||||||||||||| |  ||||| |||||  |||| |||| |||||||||||||    
T  21479159 ttacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtc 21479086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 5339149 - 5339101
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||| |||||||| ||||| ||||||||||| |||||||| |||||    
T  5339149 ttacattaaattatgtgattttctcaaattattaacaatgtcggcgtgt 5339101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 9210846 - 9210878
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatc 395  Q
    ||||||||||||||||||| |||||||||||||    
T  9210846 cattgaattatgtcattttctcaaattattatc 9210878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 20503506 - 20503474
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatt 392  Q
    ||||| |||||||||||||||||||||||||||    
T  20503506 ttacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 28918042 - 28917994
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| |||||||||| ||||||||||||||||| | |||||| |||||    
T  28918042 ttacactgaattatgtgattttttcaaattattagctatgtcggcgtgt 28917994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 38078679 - 38078753
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtt-gtgttcggtgtccgtgtc 433  Q
    |||||||||||||||| ||||||||||||||||| |  |||||||||||  ||||| |||| |||||||||||||    
T  38078679 ttacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtc 38078753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 7988469 - 7988518
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtt 409  Q
    |||||||||||||||||| ||| | |||||||||||| ||||||||||||    
T  7988469 ttacattgaattatgtcactttcttaaattattatcagtgtcgacgtgtt 7988518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 30847738 - 30847771
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    ||||||||||||||||||||||||||||||||||    
T  30847738 ttacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 3921708 - 3921660
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||||| ||||||||||||  |||| |||||||    
T  3921708 ttacattgaattatgtcattttctcaaattattattgatgttgacgtgt 3921660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 11571626 - 11571591
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  11571626 ttacattgaattatgtcattttctcaaattattatc 11571591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Original strand, 24462288 - 24462347
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgt 419  Q
    |||||||||||||||||||||||||||| | | |||| ||||||||| | ||||| ||||    
T  24462288 ttacattgaattatgtcattttttcaaaatttgatcagtgtcgacgtatctgtgtcgtgt 24462347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 40747791 - 40747826
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  40747791 ttacattgaattatgtcattttctcaaattattatc 40747826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 17754356 - 17754319
Alignment:
Q  356 atagttacattgaattatgtcattttttcaaattatta 393  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  17754356 atagttacactgaattatgtaattttttcaaattatta 17754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 498415 - 498450
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    |||||||||||||||||| ||||||||||||||||||    
T  498415 ttacattgaattatgtca-tttttcaaattattatca 498450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 310
Target Start/End: Original strand, 7918169 - 7918197
Alignment:
Q  282 actcctcggattaggtgtgtcctggtgtc 310  Q
    |||||||||||||||||||||||||||||    
T  7918169 actcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 22794096 - 22794144
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| || |||||||||||||||||||||||||||  ||| |||||||    
T  22794096 ttacactgtattatgtcattttttcaaattattatccgtgttgacgtgt 22794144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 26462663 - 26462711
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||| |||||| ||||||| | |||||||||||| |||||||||||    
T  26462663 ttacattcaattatttcattttcttaaattattatcagtgtcgacgtgt 26462711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 40686776 - 40686824
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||| ||||||| ||||| | ||||| ||||||||||||    
T  40686776 ttacattgaattatatcattttatcaaaattttatcgatgtcgacgtgt 40686824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 42325602 - 42325566
Alignment:
Q  359 gttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||| |||||||||||||||| |||||||||||||    
T  42325602 gttacactgaattatgtcattttctcaaattattatc 42325566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 42386415 - 42386454
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgt 400  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  42386415 ttacattgaattatg-cattttttcaaattattatcgatgt 42386454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 43328509 - 43328449
Alignment:
Q  359 gttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgt 419  Q
    |||||||| |||||| ||||||| |||||||||||| | |||| ||||||  |||||||||    
T  43328509 gttacattaaattatttcattttctcaaattattataagtgtcaacgtgtcagtgttgtgt 43328449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 30563454 - 30563415
Alignment:
Q  356 atagttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  30563454 atagttacattgaattatgtcattttctcaaattattatc 30563415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 18571013 - 18570978
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  18571013 ttacattgaattatgtcattttctcaaattattatc 18570978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 25317173 - 25317134
Alignment:
Q  365 ttgaattatgtcattttttcaaattattatcaatgtcgac 404  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  25317173 ttgaattatgtcattttttcaaattattatcggtgtcgac 25317134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 40682023 - 40681988
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  40682023 ttacattgaattatgtcattttctcaaattattatc 40681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 4332975 - 4332925
Alignment:
Q  352 acacatagttacattgaattatgtcattttttcaaattattatcaatgtcg 402  Q
    ||||||| |||||||||||||||| |||||  ||||||||||||| |||||    
T  4332975 acacataattacattgaattatgtgattttcccaaattattatcagtgtcg 4332925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 406
Target Start/End: Original strand, 19613631 - 19613677
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgt 406  Q
    |||||||||||||||| ||||| |||||||||||| | |||||||||    
T  19613631 ttacattgaattatgttattttctcaaattattatgagtgtcgacgt 19613677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 21374717 - 21374791
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt-tgtgttcggtgtccgtgtc 433  Q
    ||||| |||||||||| ||||||||||||||||| |  ||||| |||||| ||||  |||| |||||||||||||    
T  21374717 ttacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtc 21374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 402
Target Start/End: Complemental strand, 24011069 - 24011035
Alignment:
Q  368 aattatgtcattttttcaaattattatcaatgtcg 402  Q
    |||||||||||||| ||||||||||||||||||||    
T  24011069 aattatgtcattttctcaaattattatcaatgtcg 24011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 9626981 - 9626937
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtcgacgt 406  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||    
T  9626981 tacattcaattatgtcattttt-caaattattatcagtgtcgacgt 9626937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 10250767 - 10250726
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtc 401  Q
    |||||||||||| ||| ||||| |||||||||||||||||||    
T  10250767 ttacattgaattgtgttattttctcaaattattatcaatgtc 10250726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 12668441 - 12668474
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    ||||| ||||||||||||||||||||||||||||    
T  12668441 ttacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 394
Target Start/End: Complemental strand, 24894521 - 24894492
Alignment:
Q  365 ttgaattatgtcattttttcaaattattat 394  Q
    ||||||||||||||||||||||||||||||    
T  24894521 ttgaattatgtcattttttcaaattattat 24894492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 12748725 - 12748653
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgt 432  Q
    ||||| |||| ||||||||||| ||||||||||||| |||||  |||||  |||| |||| ||||||| ||||    
T  12748725 ttacactgaactatgtcattttctcaaattattatccatgtcagcgtgtccgtgtcgtgtccggtgtctgtgt 12748653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 30298465 - 30298513
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| |||||||||||||||| | |||||||||||  |||||||||||    
T  30298465 ttacactgaattatgtcattttattaaattattatcggtgtcgacgtgt 30298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 37497161 - 37497113
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||| || |||||| |||||||||||||| |||||| ||||    
T  37497161 ttacattgaattgtggcattttctcaaattattatcagtgtcgatgtgt 37497113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 41047915 - 41047867
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||| ||||||  || |||||||||||||||||| |||||||||||    
T  41047915 ttacattcaattattccactttttcaaattattatcagtgtcgacgtgt 41047867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 28943432 - 28943474
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcg 402  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  28943432 ttacattgagttatgtcattttatcaaattattatcaatgtcg 28943474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 30606081 - 30606119
Alignment:
Q  359 gttacattgaattatgtcattttttcaaattattatcaa 397  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30606081 gttacattgaattatgtcattttttgaaattattatcaa 30606119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 44172880 - 44172945
Alignment:
Q  334 gacaccaatacgacacaaacacatag--ttacattgaattatgtcattttttcaaattattatcaa 397  Q
    |||||||| || ||||||||||||    |||||||||||||||||||||| |||||||||||||||    
T  44172880 gacaccaacacaacacaaacacatgtgattacattgaattatgtcattttctcaaattattatcaa 44172945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 44021017 - 44020981
Alignment:
Q  359 gttacattgaattatgtcattttttcaaattattatc 395  Q
    ||||||||||||||||| |||||||||||||||||||    
T  44021017 gttacattgaattatgtaattttttcaaattattatc 44020981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 11700858 - 11700811
Alignment:
Q  346 acacaaacacatagttacattgaattatgtcattttttcaaattatta 393  Q
    ||||| ||||||| |||||||||||||||| ||||| |||||||||||    
T  11700858 acacagacacataattacattgaattatgtgattttgtcaaattatta 11700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 21365190 - 21365135
Alignment:
Q  377 attttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgt 432  Q
    |||||| |||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  21365190 atttttgcaaatttttgtcaatgtcgatgtgttagtgttgtgtttggtgtccgtgt 21365135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 38134424 - 38134459
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatc 395  Q
    |||||||||||||||||||||| |||||||||||||    
T  38134424 ttacattgaattatgtcattttctcaaattattatc 38134459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 23948433 - 23948367
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgt 426  Q
    ||||||| |||||  | |||||||||||||||||||| ||||||| |||| || |||||| ||||||    
T  23948433 ttacattcaattaattgattttttcaaattattatcagtgtcgacatgttagtcttgtgtccggtgt 23948367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 36013816 - 36013858
Alignment:
Q  360 ttacattgaattatgtcattttt-tcaaattattatcaatgtc 401  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  36013816 ttacattgaattatgtcatttttctcaaattattatcattgtc 36013858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 7438747 - 7438714
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    |||||||||||||||| |||||||||||||||||    
T  7438747 ttacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 35862005 - 35861972
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    |||||||||||||||| |||||||||||||||||    
T  35862005 ttacattgaattatgtgattttttcaaattatta 35861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 44317304 - 44317353
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtt 409  Q
    |||||||||||||||||||||||| ||| | |||||| |||| |||||||    
T  44317304 ttacattgaattatgtcatttttttaaaattttatcagtgtcaacgtgtt 44317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 1885614 - 1885566
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||||||||||| | |||||  |||||| ||||    
T  1885614 ttacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgt 1885566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 1935004 - 1934944
Alignment:
Q  348 acaaacacatagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||||||  ||||||| |||||||||| |||| ||||||||||||  |||||| ||||    
T  1935004 acaaacacatgattacattcaattatgtcaattttacaaattattatcggtgtcgatgtgt 1934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 7241012 - 7241040
Alignment:
Q  360 ttacattgaattatgtcattttttcaaat 388  Q
    |||||||||||||||||||||||||||||    
T  7241012 ttacattgaattatgtcattttttcaaat 7241040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 9050155 - 9050199
Alignment:
Q  364 attgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||| ||||||||||||||||| | ||||| ||||||||||||    
T  9050155 attgaactatgtcattttttcaaaattttatctatgtcgacgtgt 9050199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 9783429 - 9783397
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatc 395  Q
    ||||||| |||||||||||||||||||||||||    
T  9783429 cattgaactatgtcattttttcaaattattatc 9783397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 415
Target Start/End: Complemental strand, 11072356 - 11072284
Alignment:
Q  343 acgacacaaacacatagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtt 415  Q
    |||||||  ||||||| ||| |||||||||| |  ||||||||||||||||||  ||||| ||||| ||||||    
T  11072356 acgacaccgacacataattatattgaattatatatttttttcaaattattatcggtgtcggcgtgtctgtgtt 11072284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Original strand, 19930959 - 19930991
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatt 392  Q
    |||||||||||||||||||||| ||||||||||    
T  19930959 ttacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 21247754 - 21247790
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  21247754 ttacattgaattacgtcattttctcaaattattatca 21247790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 392
Target Start/End: Complemental strand, 27980837 - 27980805
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatt 392  Q
    |||||||||||||||||||||||| ||||||||    
T  27980837 ttacattgaattatgtcattttttaaaattatt 27980805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 30516375 - 30516423
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||| ||||||| |||||||||| | | |||||||||||    
T  30516375 ttacattgaattatatcattttctcaaattattgttagtgtcgacgtgt 30516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 38134350 - 38134390
Alignment:
Q  282 actcctcggattaggtgtgtcctggtgtcgaatacttatcg 322  Q
    ||||||||||||||| |||||| | ||||||||||||||||    
T  38134350 actcctcggattaggcgtgtcccgatgtcgaatacttatcg 38134390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 5307098 - 5307054
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  5307098 cattgaattatgtcattttt-caaattattatcagtgtcgacgtgt 5307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 6211442 - 6211488
Alignment:
Q  345 gacacaaacacatagttacattgaattatgtcattttttcaaattatta 393  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  6211442 gacaccaacacata--tacattgaattatgtcattttttcaaattatta 6211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 34739080 - 34739127
Alignment:
Q  361 tacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||||||||||||||||||| ||| ||||||||| ||||| ||||||    
T  34739080 tacattgaattatgtcattttctcatattattatcgatgtcaacgtgt 34739127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 9383039 - 9382981
Alignment:
Q  334 gacaccaatacgacacaaacacatagttacattgaattatgtcattttttcaaattatt 392  Q
    |||||| | |||||||| ||||||| ||||||||||||||||  |||| ||||||||||    
T  9383039 gacaccgacacgacacagacacataattacattgaattatgtagttttctcaaattatt 9382981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 403
Target Start/End: Complemental strand, 28745542 - 28745496
Alignment:
Q  357 tagttacattgaattatgtcattttttcaaattattatcaatgtcga 403  Q
    ||||||||||||||||||| | ||||||||||||||| || ||||||    
T  28745542 tagttacattgaattatgtgaatttttcaaattattagcagtgtcga 28745496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 394
Target Start/End: Original strand, 34201064 - 34201098
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattat 394  Q
    |||||||||||||||||||||| ||||||||||||    
T  34201064 ttacattgaattatgtcattttctcaaattattat 34201098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 29198497 - 29198530
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattatta 393  Q
    |||||||||||||||||||||| |||||||||||    
T  29198497 ttacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 405
Target Start/End: Original strand, 2925116 - 2925160
Alignment:
Q  362 acattgaattatgtcatttt-ttcaaattattatcaatgtcgacg 405  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||    
T  2925116 acattaaattatgtcatttttttcaaattattatcaacgtcgacg 2925160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 3508093 - 3508057
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatca 396  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  3508093 ttacattgaattatgttattttctcaaattattatca 3508057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 9936851 - 9936807
Alignment:
Q  364 attgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||| ||||||| | ||||||||||| ||||||||||||    
T  9936851 attgaattatatcattttcttaaattattatcgatgtcgacgtgt 9936807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 12936517 - 12936557
Alignment:
Q  368 aattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||| ||||| ||||||||||| ||||||||||||||    
T  12936517 aattatgtgattttatcaaattattaacaatgtcgacgtgt 12936557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 20873102 - 20873062
Alignment:
Q  368 aattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||| ||||||||||||||||||| |||||| |||||    
T  20873102 aattatgtgattttttcaaattattatctatgtcggcgtgt 20873062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 29447125 - 29447161
Alignment:
Q  357 tagttacattgaattatgtcattttttcaaattatta 393  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  29447125 tagttacattgaattatgtgattttctcaaattatta 29447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 31236595 - 31236643
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||||||||||| ||||| ||||||||||| || ||||| |||||    
T  31236595 ttacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 33697158 - 33697214
Alignment:
Q  359 gttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtt 415  Q
    |||| ||| |||||| | ||||| |||||||||||||||||||||| |||| |||||    
T  33697158 gttatattcaattattttattttctcaaattattatcaatgtcgacatgttagtgtt 33697214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 41831955 - 41831991
Alignment:
Q  357 tagttacattgaattatgtcattttttcaaattatta 393  Q
    |||||||| |||||||||| |||||||||||||||||    
T  41831955 tagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 1080 - 1043
Alignment:
Q  356 atagttacattgaattatgtcattttttcaaattatta 393  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  1080 atagttacactgaattatgtaattttttcaaattatta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 7728 - 7695
Alignment:
Q  363 cattgaattatgtcattttttcaaattattatca 396  Q
    ||||||||||||||||||| ||||||||||||||    
T  7728 cattgaattatgtcattttctcaaattattatca 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 8071 - 8119
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    ||||| |||||||||||||||| |||||||||||||  | |||||||||    
T  8071 ttacactgaattatgtcattttctcaaattattatccgtatcgacgtgt 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 102946 - 102906
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgt 400  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  102946 ttacattgaattatatcattttctcaaattattatcgatgt 102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 18126 - 18198
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgttgtgttcggtgtccgtgt 432  Q
    |||||||||||||||| ||||| ||||| | |||||  |||||||||||  |||| ||||  |||||||||||    
T  18126 ttacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgtcgtgtctggtgtccgtgt 18198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 225286 - 225334
Alignment:
Q  360 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgt 408  Q
    |||||||| ||||||||||||| |||||||||||||  ||||| |||||    
T  225286 ttacattgtattatgtcattttctcaaattattatctgtgtcggcgtgt 225334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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