View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_high_104 (Length: 349)

Name: NF0928_high_104
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_high_104
NF0928_high_104
[»] chr4 (8 HSPs)
chr4 (11-349)||(7225042-7225379)
chr4 (103-278)||(8186311-8186486)
chr4 (97-266)||(21833241-21833410)
chr4 (169-227)||(1755548-1755606)
chr4 (96-209)||(1547724-1547837)
chr4 (174-281)||(553759-553866)
chr4 (100-209)||(571256-571365)
chr4 (100-145)||(641933-641978)
[»] chr8 (5 HSPs)
chr8 (100-209)||(32151894-32152003)
chr8 (96-212)||(18314656-18314772)
chr8 (100-206)||(17635680-17635786)
chr8 (96-141)||(17643024-17643069)
chr8 (175-208)||(18318665-18318698)
[»] chr1 (2 HSPs)
chr1 (100-296)||(19467362-19467561)
chr1 (100-295)||(7555124-7555319)
[»] chr5 (2 HSPs)
chr5 (172-295)||(32268533-32268656)
chr5 (262-295)||(41900429-41900462)
[»] chr6 (2 HSPs)
chr6 (182-228)||(6395545-6395591)
chr6 (100-145)||(7993631-7993676)
[»] chr7 (3 HSPs)
chr7 (100-209)||(7977799-7977908)
chr7 (168-212)||(10169068-10169112)
chr7 (168-212)||(10176593-10176637)
[»] chr3 (2 HSPs)
chr3 (253-297)||(51763323-51763367)
chr3 (121-228)||(1657474-1657581)
[»] scaffold1155 (1 HSPs)
scaffold1155 (191-295)||(1821-1925)
[»] scaffold0345 (1 HSPs)
scaffold0345 (191-295)||(8291-8395)
[»] scaffold0105 (1 HSPs)
scaffold0105 (191-295)||(30584-30688)


Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 11 - 349
Target Start/End: Complemental strand, 7225379 - 7225042
Alignment:
Q  11 cagagagattaaccctacggagttttaaaagtgctgatgaaagagcctctactccaccaacaatgtttgtcaaccttccactttgactaaggtcgagttc 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7225379 cagagagattaaccctacggagtttgaaaagtgctgatgaaagagcctctactccaccaacaatgtttgtcaaccttccacgttgactaaggtcgagttc 7225280  T
Q  111 ttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaatattttga 210  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  7225279 ttcgagcaaagggaaacaatccgcgatgaggaacatgtcagtgctagtgacagaataaatgt-ggaacatgtgagagaggtcaaagttgtaatattttga 7225181  T
Q  211 gaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgagagattttgaggagaagcgtgt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||    
T  7225180 gaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggaaaacgagagatttcgaggagaagcgcgt 7225081  T
Q  311 ggagttcaaattggaagcttgggatatcagtagtgtagc 349  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7225080 ggagttcaaattggaagctagggatatcagtagtgtagc 7225042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 8186486 - 8186311
Alignment:
Q  103 tcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaa 202  Q
    ||||||||||| || ||||| ||||||| |||||||||||| |||||||||||| ||| |||   |||||||||||||||||| ||||||||||||||||    
T  8186486 tcgagttcttctaggaaaggaaaacaatcggcgatgaggaagatgtcagtgctattgatagattcaatgttggaacatgtgagtgaggtcaaagttgtaa 8186387  T
Q  203 tattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaa 278  Q
    ||||| | || ||| || |||| |||  ||| |||||| ||| ||| || |||| ||| ||||||||||| |||||    
T  8186386 tatttcgggagagaactcgcaatccatttgcaggaatggtgggtttgttagagagattgagtgatgtgaggttcaa 8186311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 266
Target Start/End: Complemental strand, 21833410 - 21833241
Alignment:
Q  97 ctaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaag 196  Q
    |||| ||||||||||||| |||| |||||||| | | |||||||||||| ||||||| || |||||  |  ||| |||||||| ||||| ||||||||||    
T  21833410 ctaacgtcgagttcttcgtgcaaggggaaacattcgacgatgaggaacaggtcagtggtattgaaattagcaattttggaacaagtgagagaggtcaaag 21833311  T
Q  197 ttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtga 266  Q
    | ||||| ||||| | || | || ||||||||  ||| |||||| ||| ||| || |||||||| |||||    
T  21833310 tagtaatgttttgtgcaaaaactcgcaacccatctgcgggaatggtgggtttgttggagatattgagtga 21833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 1755548 - 1755606
Alignment:
Q  169 atgttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaaccc 227  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||    
T  1755548 atgttggaacatgtgagagaggtcaaagttgtaatcttttgagagaaagcttgcaaccc 1755606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 1547837 - 1547724
Alignment:
Q  96 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaa 195  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||  ||||||||| ||||   |  |    |||||| |||||||||||| || ||||||    
T  1547837 actaaggtcgagttcttcgagaaaagggaaacaatcggcaatgatcaacatgtcaatgctttggggacgggaaatgtgggaacatgtgagagatgtcaaa 1547738  T
Q  196 gttgtaatattttg 209  Q
    |||||||| |||||    
T  1547737 gttgtaatgttttg 1547724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 553759 - 553866
Alignment:
Q  174 ggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagt 273  Q
    |||||| ||||| ||||||||||||||||| ||||| || | |||| ||||||||  ||| |||||| ||| ||| |  |||| ||  |||||||||||     
T  553759 ggaacaggtgagagaggtcaaagttgtaatgttttgggagaaagctcgcaacccatttgcgggaatggtgggtttttgggagagatcgagtgatgtgagg 553858  T
Q  274 ttcaatgg 281  Q
    ||||||||    
T  553859 ttcaatgg 553866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 571256 - 571365
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    |||| |||||||||||||||||||||||| |  | |||||| |||| ||| ||| || ||| ||||    ||| ||||||  |||| || ||||||||||    
T  571256 aggtggagttcttcgagcaaagggaaacagtccgagatgagcaacaagtcggtggtactgatagaatccttgtaggaacaattgagagatgtcaaagttg 571355  T
Q  200 taatattttg 209  Q
    ||||||||||    
T  571356 taatattttg 571365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 641933 - 641978
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaaca 145  Q
    ||||| ||||||||||| ||||||||||||||||| || |||||||    
T  641933 aggtcaagttcttcgagtaaagggaaacaattggcaataaggaaca 641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 32151894 - 32152003
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||| ||| |||| | |||||||| ||||    ||||| ||||| |||||||||||||    
T  32151894 aggtcaagttcttcgagcaaagggaaacaatcggcaatgaggaacaagtcggtgccattgaaagaataaatacgagaacaagtgagagaggtcaaagttg 32151993  T
Q  200 taatattttg 209  Q
    |||| |||||    
T  32151994 taatgttttg 32152003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 18314772 - 18314656
Alignment:
Q  96 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaa 195  Q
    |||||||||||||||||||||||||||||||||||  || |||||||| |  ||||||| |  || |||   |||||  ||||||| ||| |||||||||    
T  18314772 actaaggtcgagttcttcgagcaaagggaaacaatcagcaatgaggaagagatcagtgccatggagagattgaatgtaagaacatgagagtgaggtcaaa 18314673  T
Q  196 gttgtaatattttgaga 212  Q
    |||||||||||||||||    
T  18314672 gttgtaatattttgaga 18314656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 206
Target Start/End: Complemental strand, 17635786 - 17635680
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||  ||||  || ||    ||||  |||||| ||||| |||||||||||||    
T  17635786 aggtcaagttcttcgagcaaagggaaacaaccggcgatgaggaacatgtcaaagctacggagagtgttaatgcaggaacaagtgagagaggtcaaagttg 17635687  T
Q  200 taatatt 206  Q
    |||||||    
T  17635686 taatatt 17635680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 17643069 - 17643024
Alignment:
Q  96 actaaggtcgagttcttcgagcaaagggaaacaattggcgatgagg 141  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||||    
T  17643069 actaagatcgagttcttctagcaaagggaaacaatcagcgatgagg 17643024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 18318698 - 18318665
Alignment:
Q  175 gaacatgtgagcgaggtcaaagttgtaatatttt 208  Q
    ||||||||||| ||||||||||||||||||||||    
T  18318698 gaacatgtgagtgaggtcaaagttgtaatatttt 18318665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 296
Target Start/End: Complemental strand, 19467561 - 19467362
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    |||| |||||||||||||||||| ||||| |  ||||||||||||| ||||||| || |||||     ||||| | |||| ||||| |||||||||||||    
T  19467561 aggttgagttcttcgagcaaaggaaaacattccgcgatgaggaacaggtcagtggtattgaaatctgcaatgtcgaaacaagtgagagaggtcaaagttg 19467462  T
Q  200 taatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgag---tttcaatggtaaatgagagatttt 296  Q
    ||||||||||||  | | || ||||||||  ||| |||||| ||  | | || |||||| | || ||||||||   ||||||||| ||||||||||||||    
T  19467461 taatattttgagtgaaaactcgcaacccatttgcgggaatggtgtgtctgttggagataatgagagatgtgagttttttcaatgggaaatgagagatttt 19467362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 295
Target Start/End: Original strand, 7555124 - 7555319
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    |||| |||||||||||||||||||||||| |  || ||||| |||| |||| ||||| ||| ||||   || |||||||| ||||| ||||| |||||||    
T  7555124 aggttgagttcttcgagcaaagggaaacattcagcaatgagtaacaagtcattgctattgatagaatccattttggaacaagtgagtgaggttaaagttg 7555223  T
Q  200 taatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgagagattt 295  Q
    |||||||||| || | |||| |||| |||  ||| || ||| ||| ||  || || |||| ||||||||| || |||||||| |||  ||||||||    
T  7555224 taatattttgggagaaagctcgcaatccaattgcagggatggtgggttggttggaaatatcaagtgatgttaggttcaatgggaaacaagagattt 7555319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 295
Target Start/End: Original strand, 32268533 - 32268656
Alignment:
Q  172 ttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtga 271  Q
    |||||||| ||||| ||||||||||||||||| || |  |||| ||  |||||||||  ||  ||||||||| |||| || |||| ||| ||||| ||||    
T  32268533 ttggaacaagtgagagaggtcaaagttgtaatcttcttcgaaaaagtctgcaacccaattgtgggaatgatgcatttgtttgagagattgagtgacgtga 32268632  T
Q  272 gtttcaatggtaaatgagagattt 295  Q
    |||||||||| ||| |||||||||    
T  32268633 gtttcaatggaaaacgagagattt 32268656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 41900462 - 41900429
Alignment:
Q  262 agtgatgtgagtttcaatggtaaatgagagattt 295  Q
    |||||||||||||||||||| |||||||||||||    
T  41900462 agtgatgtgagtttcaatggaaaatgagagattt 41900429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 6395545 - 6395591
Alignment:
Q  182 tgagcgaggtcaaagttgtaatattttgagaaagagcttgcaaccca 228  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||    
T  6395545 tgagagaggtcaaagttgtaatattttgggagagagcttgcaaccca 6395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 7993676 - 7993631
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaaca 145  Q
    |||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  7993676 aggttgagttctttgagcaaagggaaacaattggcaatgagtaaca 7993631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 7977799 - 7977908
Alignment:
Q  100 aggtcgagttcttcgagcaaagggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttg 199  Q
    |||||||||||||| ||||||||||||||||  || ||||| |||||||   || || | | |||   |||||| |||||| |||| |||||||||||||    
T  7977799 aggtcgagttcttcaagcaaagggaaacaatctgctatgagaaacatgtggttgatattaatagattcaatgttagaacatttgagtgaggtcaaagttg 7977898  T
Q  200 taatattttg 209  Q
     |||||||||    
T  7977899 caatattttg 7977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 10169112 - 10169068
Alignment:
Q  168 aatgttggaacatgtgagcgaggtcaaagttgtaatattttgaga 212  Q
    ||||| |||||| ||||| |||||||||||| |||||||||||||    
T  10169112 aatgtcggaacaagtgagagaggtcaaagttctaatattttgaga 10169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 10176637 - 10176593
Alignment:
Q  168 aatgttggaacatgtgagcgaggtcaaagttgtaatattttgaga 212  Q
    ||||| |||||| ||||| |||||||||||| |||||||||||||    
T  10176637 aatgtcggaacaagtgagagaggtcaaagttctaatattttgaga 10176593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 51763367 - 51763323
Alignment:
Q  253 gagatattaagtgatgtgagtttcaatggtaaatgagagattttg 297  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||    
T  51763367 gagagattaagtgatgtgagtttcaatgggaaacgagagattttg 51763323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 1657474 - 1657581
Alignment:
Q  121 gggaaacaattggcgatgaggaacatgtcagtgctagtgaaagaaaaaatgttggaacatgtgagcgaggtcaaagttgtaatattttgagaaagagctt 220  Q
    ||||||||||  || |||||||||| |||||||| | ||| |||   ||||  |||||| ||||| ||||| |||||| |||| |||||||| | |||||    
T  1657474 gggaaacaatcagcaatgaggaacaggtcagtgcgattgatagattcaatgaaggaacacgtgagagaggttaaagttttaatgttttgagagaaagctt 1657573  T
Q  221 gcaaccca 228  Q
    ||||||||    
T  1657574 gcaaccca 1657581  T

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Target: scaffold1155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 1925 - 1821
Alignment:
Q  191 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 290  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  1925 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 1826  T
Q  291 gattt 295  Q
    |||||    
T  1825 gattt 1821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 8291 - 8395
Alignment:
Q  191 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 290  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  8291 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 8390  T
Q  291 gattt 295  Q
    |||||    
T  8391 gattt 8395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 30688 - 30584
Alignment:
Q  191 tcaaagttgtaatattttgagaaagagcttgcaacccacgtgctggaatgatggatttattcgagatattaagtgatgtgagtttcaatggtaaatgaga 290  Q
    ||||||||||||||||||| || | | || ||||||||  ||| ||||| |||| ||  |  |||| ||| ||||||||||| |||||||| ||| ||||    
T  30688 tcaaagttgtaatattttgggataaaactcgcaacccatctgcgggaattatgggttggtaggagagattgagtgatgtgaggttcaatgggaaacgaga 30589  T
Q  291 gattt 295  Q
    |||||    
T  30588 gattt 30584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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