View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0928_high_148 (Length: 297)
Name: NF0928_high_148
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0928_high_148 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 56188274 - 56187982
Alignment:
| Q |
1 |
tacactacacctatcaatctattttcattactcgcatatgctgtggtaatatctccttctgatatgaaagattacttcacaaaggtagattatataatgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
56188274 |
tacactacacctatcaatctattttcattactcgcatatgctgtggtaatatctccttcttatatgaaagattacttcacaaaggtagattatataatgt |
56188175 |
T |
|
| Q |
101 |
gatagacnnnnnnnngttcatattcaagatacccaacttcaaattaataacattttttattcatatgtttggcattttgattatctagatactagacttg |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
56188174 |
gatagactttcttttgttcatattcaagatacccaacttcaaattaataacattttttattcatatgtttggcattttgattatctaaatactagacttg |
56188075 |
T |
|
| Q |
201 |
tgatgtaaagtattttcatcaatgataccttcaatgacattttggtttgggagcatgctgatcaccatgtatgattttaaattgtggttgcgg |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
56188074 |
tgatgtaaagtattttcatcaatgataccttcaatgacattttggtttgggagcattctgatcaccatgtatgattttaaattgtggttgcgg |
56187982 |
T |
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