View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0928_high_165 (Length: 284)
Name: NF0928_high_165
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0928_high_165 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 7 - 284
Target Start/End: Complemental strand, 1699732 - 1699455
Alignment:
| Q |
7 |
caaactacatatatgataatggtggcatgtttatttttctcactgttttatcctcaagcctttgatttacttgtatttatctgaattgcattgtccattt |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1699732 |
caaactacatatatgataatggtggcatgtttatttttctcattgttttatcctcaagcctttgatttacttgtatttatctgaattgcattgtccattt |
1699633 |
T |
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| Q |
107 |
gcatgagtccaaagattttgaacctaacttattttgctacgctttaactattgtcacgcattgagcacacgcgtttaagaaggattaagaaaagaagtgg |
206 |
Q |
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| T |
1699632 |
gcacgagtccaaagattttgaacctaacttattttgctacgctttaactattgtcacgcattgagcacacgcgtttaagaaggattaagaaaagaagtgg |
1699533 |
T |
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| Q |
207 |
aatcacaaatcataacacaataaagatacttaaagtgaatgcagcatgctgtgatttactgtgtcgattttcatctga |
284 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
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| T |
1699532 |
aatcacaaatcataacacaataaagatacttaaagtgtatgcagcatgctgtgatttactgtgtggattttcatctga |
1699455 |
T |
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