View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0928_high_168 (Length: 275)
Name: NF0928_high_168
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0928_high_168 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 35166466 - 35166722
Alignment:
| Q |
3 |
agccaccaacaacaacattgagaattgttgaaaccaaatttcacactgacttgcattccataaggacaattccaattctaattgcttgcggttcttgcaa |
102 |
Q |
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| T |
35166466 |
agccaccaacaacaacattgagaattgttgaaaccaaatttcacactgacttgcattccataaggacaattccaattctaattgcttgcggttcttgcaa |
35166565 |
T |
|
| Q |
103 |
acaacaacgacttttaaatttaaatgaatattaaaatgttccatgttatactatggtgtgaccggtatgtttttcaatcaaaagaaataaaattctatta |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35166566 |
acaacaacgacttttaaatttaaatgaatattaaaatgtcccatgttatactatggtgtgaccggtatgtttttcaatcaaaagaaataaaattctatta |
35166665 |
T |
|
| Q |
203 |
ataagattattcaaggttggtgtactttttctattttcttccttaattaaaaactta |
259 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
35166666 |
ataagattattcaaggttggtgtaatttttctattttcttccttaattaaaaactta |
35166722 |
T |
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