View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_high_173 (Length: 267)

Name: NF0928_high_173
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_high_173
NF0928_high_173
[»] chr8 (63 HSPs)
chr8 (2-238)||(43577200-43577436)
chr8 (2-141)||(2563337-2563476)
chr8 (2-141)||(19925357-19925495)
chr8 (2-141)||(36907612-36907755)
chr8 (2-141)||(30973968-30974107)
chr8 (28-141)||(14262331-14262444)
chr8 (49-141)||(9782209-9782301)
chr8 (23-141)||(2669648-2669766)
chr8 (2-136)||(37410886-37411019)
chr8 (2-141)||(42363285-42363423)
chr8 (2-141)||(218222-218359)
chr8 (2-141)||(694782-694919)
chr8 (2-141)||(698991-699128)
chr8 (2-141)||(731845-731982)
chr8 (2-141)||(855741-855878)
chr8 (2-141)||(12607059-12607197)
chr8 (2-141)||(14942403-14942542)
chr8 (2-141)||(38338819-38338957)
chr8 (2-117)||(42102086-42102200)
chr8 (11-141)||(11988185-11988314)
chr8 (1-141)||(19925535-19925675)
chr8 (28-139)||(1184788-1184899)
chr8 (2-64)||(3664115-3664177)
chr8 (24-141)||(24350487-24350604)
chr8 (25-141)||(10298894-10299010)
chr8 (2-141)||(32131419-32131558)
chr8 (2-84)||(37966216-37966298)
chr8 (28-141)||(32975692-32975805)
chr8 (28-141)||(38895664-38895777)
chr8 (10-140)||(8216872-8217004)
chr8 (1-141)||(32924181-32924319)
chr8 (1-96)||(34545621-34545714)
chr8 (50-137)||(35168410-35168500)
chr8 (2-117)||(38195466-38195580)
chr8 (28-141)||(28280714-28280827)
chr8 (53-141)||(14724933-14725021)
chr8 (30-98)||(23412741-23412809)
chr8 (2-121)||(32751117-32751236)
chr8 (2-118)||(3129985-3130104)
chr8 (2-88)||(2019670-2019756)
chr8 (28-141)||(9131096-9131209)
chr8 (1-133)||(16972332-16972465)
chr8 (28-101)||(28879063-28879136)
chr8 (28-141)||(34286532-34286644)
chr8 (27-91)||(1089017-1089081)
chr8 (50-117)||(24866943-24867010)
chr8 (70-136)||(35055466-35055535)
chr8 (11-141)||(19327855-19327984)
chr8 (53-136)||(41145369-41145451)
chr8 (66-132)||(25333709-25333774)
chr8 (28-93)||(2289902-2289967)
chr8 (96-141)||(2656522-2656567)
chr8 (2-43)||(10213818-10213859)
chr8 (2-55)||(29713169-29713222)
chr8 (1-90)||(31459025-31459113)
chr8 (2-43)||(34286486-34286527)
chr8 (28-101)||(35453415-35453488)
chr8 (10-43)||(41145326-41145359)
chr8 (34-90)||(3641231-3641287)
chr8 (1-93)||(16706116-16706207)
chr8 (28-141)||(29218219-29218334)
chr8 (14-90)||(29243083-29243158)
chr8 (3-43)||(32131563-32131603)
[»] chr3 (67 HSPs)
chr3 (25-141)||(38524090-38524206)
chr3 (2-141)||(4974290-4974429)
chr3 (46-141)||(20174908-20175003)
chr3 (4-141)||(30383749-30383883)
chr3 (2-136)||(29614173-29614306)
chr3 (2-136)||(3645282-3645415)
chr3 (29-102)||(30473150-30473223)
chr3 (25-141)||(45049342-45049458)
chr3 (2-141)||(28741182-28741321)
chr3 (2-136)||(20894482-20894615)
chr3 (2-136)||(4257273-4257408)
chr3 (2-141)||(22809161-22809301)
chr3 (2-101)||(10448753-10448852)
chr3 (2-141)||(53218008-53218147)
chr3 (2-140)||(584999-585137)
chr3 (2-88)||(36266223-36266309)
chr3 (28-141)||(40240545-40240658)
chr3 (24-141)||(42956147-42956264)
chr3 (28-140)||(51662809-51662915)
chr3 (2-110)||(2086690-2086798)
chr3 (67-135)||(19307985-19308053)
chr3 (10-141)||(40581044-40581176)
chr3 (2-141)||(1516066-1516204)
chr3 (2-141)||(37456402-37456540)
chr3 (67-137)||(48816759-48816829)
chr3 (28-137)||(43079906-43080015)
chr3 (10-111)||(51409380-51409481)
chr3 (2-86)||(29830793-29830877)
chr3 (50-141)||(34707681-34707772)
chr3 (2-64)||(30499945-30500007)
chr3 (47-141)||(37243490-37243584)
chr3 (28-102)||(37601034-37601108)
chr3 (1-90)||(30917513-30917602)
chr3 (28-141)||(45331263-45331376)
chr3 (67-129)||(43971827-43971889)
chr3 (1-141)||(47403730-47403868)
chr3 (28-129)||(32901128-32901229)
chr3 (27-91)||(5129833-5129897)
chr3 (69-141)||(33946518-33946590)
chr3 (85-141)||(42381228-42381284)
chr3 (78-141)||(17752099-17752162)
chr3 (78-141)||(19053419-19053482)
chr3 (28-141)||(24842074-24842188)
chr3 (27-113)||(33468118-33468209)
chr3 (34-141)||(53787720-53787827)
chr3 (2-44)||(31787644-31787686)
chr3 (53-107)||(32900730-32900784)
chr3 (28-129)||(52021251-52021353)
chr3 (32-118)||(52421132-52421218)
chr3 (28-141)||(3870194-3870307)
chr3 (67-141)||(29830607-29830685)
chr3 (73-141)||(48597834-48597903)
chr3 (53-141)||(3876231-3876319)
chr3 (2-90)||(17383484-17383572)
chr3 (72-140)||(23816140-23816208)
chr3 (85-141)||(42409942-42409998)
chr3 (30-140)||(10272129-10272237)
chr3 (50-141)||(37778161-37778251)
chr3 (47-90)||(43376719-43376762)
chr3 (50-112)||(11528918-11528980)
chr3 (50-119)||(10521181-10521250)
chr3 (50-119)||(10667425-10667494)
chr3 (76-141)||(36638871-36638936)
chr3 (2-43)||(50022022-50022063)
chr3 (75-139)||(7124665-7124729)
chr3 (2-90)||(21296745-21296833)
chr3 (28-96)||(41601344-41601412)
[»] chr5 (77 HSPs)
chr5 (2-141)||(15413971-15414110)
chr5 (1-141)||(40415940-40416080)
chr5 (2-141)||(43318982-43319121)
chr5 (1-141)||(29922157-29922297)
chr5 (2-141)||(4728825-4728962)
chr5 (2-141)||(5203402-5203540)
chr5 (1-90)||(15363990-15364079)
chr5 (2-112)||(25332233-25332345)
chr5 (28-141)||(39990581-39990694)
chr5 (1-141)||(6025953-6026092)
chr5 (2-141)||(26002976-26003115)
chr5 (2-141)||(42852001-42852139)
chr5 (2-115)||(15122524-15122636)
chr5 (28-141)||(28625485-28625598)
chr5 (2-90)||(780587-780674)
chr5 (50-141)||(36206061-36206153)
chr5 (1-141)||(40152844-40152983)
chr5 (14-141)||(13060570-13060697)
chr5 (2-141)||(16722006-16722144)
chr5 (28-141)||(29659067-29659178)
chr5 (28-141)||(29418720-29418833)
chr5 (53-141)||(41419531-41419619)
chr5 (2-129)||(20458538-20458664)
chr5 (2-101)||(33757067-33757165)
chr5 (10-92)||(10537236-10537318)
chr5 (14-135)||(12986988-12987109)
chr5 (28-141)||(17657247-17657360)
chr5 (2-141)||(1371963-1372100)
chr5 (50-141)||(1868873-1868964)
chr5 (10-141)||(7364277-7364408)
chr5 (50-141)||(23087747-23087838)
chr5 (50-141)||(28357379-28357470)
chr5 (2-96)||(17128257-17128351)
chr5 (12-141)||(1576620-1576748)
chr5 (12-141)||(1608067-1608195)
chr5 (28-141)||(41059757-41059870)
chr5 (28-135)||(12467269-12467377)
chr5 (2-90)||(17668379-17668466)
chr5 (2-90)||(33667412-33667499)
chr5 (28-116)||(41534628-41534716)
chr5 (2-141)||(15709860-15709998)
chr5 (2-141)||(24030194-24030332)
chr5 (28-141)||(27981880-27981993)
chr5 (2-136)||(11191497-11191623)
chr5 (2-86)||(22201959-22202043)
chr5 (54-141)||(40452445-40452533)
chr5 (5-88)||(2670057-2670140)
chr5 (31-141)||(3977483-3977591)
chr5 (2-141)||(11991284-11991422)
chr5 (29-139)||(11912072-11912182)
chr5 (28-141)||(13625488-13625602)
chr5 (51-117)||(28357169-28357235)
chr5 (28-141)||(40697006-40697124)
chr5 (28-120)||(1473361-1473454)
chr5 (1-86)||(2531304-2531388)
chr5 (61-141)||(2577396-2577477)
chr5 (50-119)||(38461272-38461341)
chr5 (23-139)||(3536221-3536337)
chr5 (61-141)||(6144776-6144856)
chr5 (12-111)||(18602592-18602691)
chr5 (61-133)||(35536883-35536955)
chr5 (2-45)||(2577350-2577393)
chr5 (19-90)||(36106758-36106829)
chr5 (67-141)||(9477380-9477454)
chr5 (10-96)||(22573640-22573726)
chr5 (55-141)||(27805947-27806033)
chr5 (13-98)||(2502730-2502815)
chr5 (3-141)||(8550109-8550249)
chr5 (61-90)||(32508158-32508187)
chr5 (2-43)||(40452399-40452440)
chr5 (2-43)||(41059711-41059752)
chr5 (2-43)||(42558639-42558680)
chr5 (28-96)||(1943015-1943083)
chr5 (50-141)||(5559887-5559981)
chr5 (12-112)||(11706915-11707015)
chr5 (45-117)||(42808873-42808945)
chr5 (28-96)||(43268634-43268702)
[»] chr1 (78 HSPs)
chr1 (6-141)||(16708782-16708917)
chr1 (6-141)||(51162252-51162387)
chr1 (34-139)||(34265580-34265685)
chr1 (2-141)||(37156888-37157025)
chr1 (2-141)||(3116030-3116168)
chr1 (2-141)||(29333396-29333535)
chr1 (1-141)||(37712046-37712185)
chr1 (2-141)||(32497240-32497378)
chr1 (2-141)||(4068094-4068233)
chr1 (2-141)||(17628393-17628531)
chr1 (28-141)||(35282562-35282675)
chr1 (10-141)||(9572752-9572884)
chr1 (2-117)||(5243396-5243510)
chr1 (1-136)||(13412426-13412560)
chr1 (2-129)||(17814170-17814296)
chr1 (42-141)||(46263417-46263515)
chr1 (10-141)||(46689518-46689649)
chr1 (11-141)||(10365159-10365288)
chr1 (25-139)||(15515317-15515431)
chr1 (2-141)||(35275866-35276006)
chr1 (28-141)||(37329380-37329493)
chr1 (28-141)||(48819304-48819417)
chr1 (1-141)||(15631882-15632022)
chr1 (2-138)||(16225488-16225622)
chr1 (2-117)||(5347134-5347248)
chr1 (30-141)||(13038954-13039065)
chr1 (2-141)||(15791363-15791501)
chr1 (28-119)||(25485753-25485844)
chr1 (47-141)||(3069822-3069916)
chr1 (28-141)||(6337724-6337837)
chr1 (3-140)||(26435144-26435280)
chr1 (2-139)||(35590109-35590246)
chr1 (2-119)||(49971230-49971347)
chr1 (33-141)||(26988158-26988266)
chr1 (2-90)||(37148112-37148200)
chr1 (2-141)||(12256586-12256724)
chr1 (2-141)||(15235129-15235267)
chr1 (2-119)||(26946094-26946212)
chr1 (52-141)||(45267494-45267584)
chr1 (28-141)||(22593375-22593488)
chr1 (2-114)||(19220153-19220264)
chr1 (28-119)||(36422971-36423062)
chr1 (50-141)||(41196678-41196769)
chr1 (70-141)||(46473141-46473212)
chr1 (32-141)||(16888934-16889042)
chr1 (28-139)||(1005345-1005456)
chr1 (10-141)||(20169251-20169382)
chr1 (28-123)||(28122621-28122716)
chr1 (28-141)||(10082255-10082369)
chr1 (2-129)||(22103088-22103215)
chr1 (2-119)||(26542952-26543069)
chr1 (14-139)||(50919479-50919603)
chr1 (67-135)||(1683875-1683943)
chr1 (53-141)||(42591412-42591500)
chr1 (29-100)||(39941516-39941587)
chr1 (10-139)||(10850036-10850170)
chr1 (75-141)||(14461009-14461075)
chr1 (27-117)||(36259283-36259373)
chr1 (6-119)||(19284879-19284994)
chr1 (29-106)||(39941588-39941665)
chr1 (2-43)||(41196632-41196673)
chr1 (2-111)||(5610485-5610596)
chr1 (28-116)||(18327529-18327617)
chr1 (28-136)||(31378724-31378832)
chr1 (75-141)||(391229-391293)
chr1 (2-89)||(22088432-22088518)
chr1 (51-141)||(23544819-23544909)
chr1 (2-41)||(26988273-26988312)
chr1 (50-141)||(28690031-28690122)
chr1 (1-43)||(19220296-19220337)
chr1 (28-89)||(41003392-41003454)
chr1 (86-136)||(49738274-49738324)
chr1 (55-117)||(12828154-12828218)
chr1 (2-43)||(47413495-47413536)
chr1 (2-42)||(26435097-26435137)
chr1 (2-101)||(42363581-42363678)
chr1 (10-141)||(46500968-46501100)
chr1 (51-111)||(47413400-47413460)
[»] chr4 (78 HSPs)
chr4 (28-137)||(22397277-22397386)
chr4 (2-141)||(2702683-2702822)
chr4 (2-146)||(46175942-46176085)
chr4 (2-141)||(47202805-47202943)
chr4 (2-141)||(15184526-15184664)
chr4 (2-141)||(29877618-29877757)
chr4 (1-141)||(4603300-4603439)
chr4 (25-141)||(26206322-26206438)
chr4 (3-141)||(18424246-18424383)
chr4 (28-138)||(43983353-43983463)
chr4 (2-119)||(22303075-22303191)
chr4 (50-141)||(17222856-17222947)
chr4 (2-141)||(19725272-19725411)
chr4 (28-111)||(39932752-39932835)
chr4 (10-141)||(46704238-46704368)
chr4 (28-137)||(48591396-48591505)
chr4 (53-141)||(41228933-41229021)
chr4 (2-141)||(43415256-43415396)
chr4 (2-141)||(52700511-52700650)
chr4 (66-141)||(18630863-18630938)
chr4 (2-129)||(22117333-22117459)
chr4 (2-141)||(42617198-42617336)
chr4 (28-141)||(896975-897088)
chr4 (28-141)||(7148777-7148890)
chr4 (2-141)||(23297417-23297553)
chr4 (49-129)||(39931524-39931603)
chr4 (10-101)||(212956-213046)
chr4 (10-141)||(40699343-40699478)
chr4 (28-129)||(2141646-2141747)
chr4 (28-141)||(2548015-2548128)
chr4 (68-129)||(7206566-7206627)
chr4 (28-141)||(23335647-23335760)
chr4 (2-119)||(35124366-35124483)
chr4 (28-129)||(52274100-52274201)
chr4 (2-101)||(2494408-2494507)
chr4 (2-89)||(10794929-10795016)
chr4 (14-129)||(15179809-15179923)
chr4 (10-141)||(38345790-38345920)
chr4 (2-141)||(12495612-12495753)
chr4 (28-118)||(28074370-28074459)
chr4 (11-138)||(948060-948188)
chr4 (2-141)||(11679095-11679233)
chr4 (2-141)||(11687374-11687512)
chr4 (73-141)||(22273830-22273898)
chr4 (2-141)||(42611837-42611975)
chr4 (25-141)||(55638049-55638165)
chr4 (1-45)||(55802241-55802285)
chr4 (2-141)||(9201630-9201768)
chr4 (34-141)||(35010222-35010329)
chr4 (2-141)||(35405664-35405801)
chr4 (51-141)||(10046260-10046350)
chr4 (51-141)||(36255004-36255094)
chr4 (28-138)||(36740909-36741019)
chr4 (28-141)||(488352-488465)
chr4 (2-63)||(19414108-19414169)
chr4 (56-141)||(28663606-28663690)
chr4 (72-141)||(33533977-33534046)
chr4 (28-93)||(54412063-54412128)
chr4 (5-89)||(3564202-3564286)
chr4 (21-117)||(4398198-4398294)
chr4 (97-141)||(7396354-7396398)
chr4 (28-96)||(23284789-23284856)
chr4 (27-119)||(46650275-46650367)
chr4 (1-45)||(55802137-55802181)
chr4 (2-89)||(10796365-10796452)
chr4 (55-141)||(36298363-36298450)
chr4 (2-115)||(1374356-1374470)
chr4 (2-56)||(3966709-3966763)
chr4 (1-43)||(7673431-7673473)
chr4 (1-43)||(23297558-23297600)
chr4 (14-64)||(43213638-43213688)
chr4 (2-92)||(43699500-43699590)
chr4 (2-43)||(3564329-3564370)
chr4 (18-102)||(24031063-24031148)
chr4 (10-43)||(34526267-34526300)
chr4 (2-43)||(42153084-42153125)
chr4 (2-43)||(48591346-48591387)
chr4 (28-64)||(19298179-19298215)
[»] chr2 (66 HSPs)
chr2 (28-146)||(12238449-12238564)
chr2 (2-146)||(24438998-24439142)
chr2 (2-129)||(32366129-32366255)
chr2 (1-136)||(32522019-32522153)
chr2 (28-141)||(21788462-21788575)
chr2 (2-141)||(27880965-27881104)
chr2 (2-119)||(22898347-22898463)
chr2 (53-141)||(16108090-16108178)
chr2 (2-141)||(4026905-4027043)
chr2 (2-138)||(4090468-4090604)
chr2 (50-141)||(36501483-36501574)
chr2 (2-141)||(38471759-38471898)
chr2 (2-141)||(38216002-38216137)
chr2 (28-137)||(29774750-29774859)
chr2 (49-141)||(735990-736082)
chr2 (53-141)||(42064881-42064969)
chr2 (20-112)||(43787800-43787892)
chr2 (2-129)||(2401602-2401728)
chr2 (2-141)||(11776963-11777102)
chr2 (86-141)||(12950083-12950138)
chr2 (2-141)||(15155792-15155931)
chr2 (10-141)||(33321280-33321411)
chr2 (2-86)||(35515503-35515587)
chr2 (28-96)||(43796935-43797003)
chr2 (28-135)||(4004824-4004931)
chr2 (2-141)||(22422137-22422275)
chr2 (2-92)||(2757088-2757176)
chr2 (10-83)||(638197-638270)
chr2 (28-141)||(887417-887530)
chr2 (2-141)||(10574129-10574268)
chr2 (10-98)||(34913401-34913489)
chr2 (2-86)||(40301331-40301414)
chr2 (14-100)||(24007784-24007870)
chr2 (28-141)||(12683574-12683687)
chr2 (72-141)||(17546473-17546542)
chr2 (28-133)||(25836688-25836793)
chr2 (6-86)||(8441456-8441536)
chr2 (1-117)||(29133659-29133774)
chr2 (2-117)||(1836980-1837094)
chr2 (2-111)||(2790068-2790178)
chr2 (2-124)||(5903512-5903634)
chr2 (67-141)||(7480867-7480940)
chr2 (50-128)||(12223879-12223957)
chr2 (2-44)||(33321234-33321276)
chr2 (2-92)||(33321420-33321510)
chr2 (53-139)||(39070843-39070929)
chr2 (25-118)||(8342991-8343083)
chr2 (14-142)||(12266987-12267116)
chr2 (49-98)||(27931481-27931530)
chr2 (5-136)||(755714-755846)
chr2 (5-141)||(19683556-19683690)
chr2 (28-139)||(13056297-13056408)
chr2 (2-61)||(16108511-16108570)
chr2 (28-87)||(41554602-41554661)
chr2 (94-141)||(43796986-43797033)
chr2 (75-141)||(23956232-23956298)
chr2 (54-136)||(30382242-30382324)
chr2 (75-117)||(37409695-37409737)
chr2 (2-43)||(4533445-4533486)
chr2 (50-138)||(5516102-5516191)
chr2 (72-141)||(8832506-8832575)
chr2 (28-117)||(9270124-9270211)
chr2 (19-88)||(17531945-17532013)
chr2 (54-138)||(17797207-17797289)
chr2 (2-63)||(26440071-26440131)
chr2 (14-117)||(13839779-13839880)
[»] chr7 (58 HSPs)
chr7 (2-141)||(35809069-35809208)
chr7 (2-141)||(22032741-22032880)
chr7 (2-141)||(22575565-22575704)
chr7 (2-139)||(22319262-22319398)
chr7 (2-141)||(16932898-16933036)
chr7 (2-141)||(16938281-16938419)
chr7 (2-141)||(16958795-16958933)
chr7 (2-121)||(19913924-19914043)
chr7 (2-141)||(28004563-28004701)
chr7 (28-137)||(29378650-29378759)
chr7 (50-141)||(14691267-14691358)
chr7 (2-141)||(44799383-44799520)
chr7 (2-141)||(47654382-47654521)
chr7 (59-141)||(18251492-18251573)
chr7 (25-141)||(47862724-47862839)
chr7 (2-141)||(23137131-23137269)
chr7 (2-141)||(29390519-29390657)
chr7 (10-141)||(44613441-44613572)
chr7 (2-96)||(24371420-24371513)
chr7 (6-118)||(14675951-14676062)
chr7 (2-141)||(35246651-35246787)
chr7 (20-113)||(20888570-20888664)
chr7 (4-141)||(991481-991617)
chr7 (25-141)||(47648540-47648655)
chr7 (2-141)||(2194010-2194151)
chr7 (2-141)||(38372537-38372676)
chr7 (2-119)||(48949700-48949816)
chr7 (1-141)||(1312092-1312231)
chr7 (28-141)||(47511048-47511163)
chr7 (27-140)||(41094222-41094331)
chr7 (2-70)||(18260884-18260952)
chr7 (2-86)||(25536257-25536340)
chr7 (2-86)||(40629440-40629523)
chr7 (50-141)||(43818846-43818938)
chr7 (50-141)||(30181577-30181668)
chr7 (53-112)||(43391751-43391810)
chr7 (18-112)||(21027510-21027604)
chr7 (67-141)||(23356459-23356533)
chr7 (28-137)||(41677379-41677489)
chr7 (20-90)||(14593145-14593217)
chr7 (2-43)||(29390473-29390514)
chr7 (14-70)||(9546423-9546479)
chr7 (28-141)||(34922936-34923051)
chr7 (73-141)||(46744003-46744071)
chr7 (10-141)||(48021616-48021746)
chr7 (5-91)||(7098118-7098204)
chr7 (20-137)||(16012698-16012812)
chr7 (53-134)||(28759812-28759896)
chr7 (52-141)||(39279458-39279548)
chr7 (2-43)||(7775354-7775395)
chr7 (10-43)||(10383586-10383619)
chr7 (28-89)||(19308511-19308572)
chr7 (53-141)||(37465854-37465943)
chr7 (53-89)||(8180611-8180647)
chr7 (50-141)||(9024791-9024883)
chr7 (61-141)||(18265448-18265527)
chr7 (33-93)||(31613681-31613741)
chr7 (1-85)||(48895275-48895358)
[»] chr6 (46 HSPs)
chr6 (2-141)||(10619208-10619349)
chr6 (7-141)||(21610017-21610151)
chr6 (2-141)||(10184298-10184436)
chr6 (2-141)||(32615383-32615521)
chr6 (2-133)||(8011020-8011153)
chr6 (4-141)||(21891306-21891443)
chr6 (2-141)||(1468155-1468292)
chr6 (2-141)||(4808551-4808689)
chr6 (10-141)||(29623445-29623576)
chr6 (2-129)||(17914925-17915051)
chr6 (25-141)||(32165229-32165344)
chr6 (10-141)||(3829887-3830018)
chr6 (2-101)||(6632638-6632737)
chr6 (25-140)||(16589753-16589868)
chr6 (25-140)||(16605512-16605627)
chr6 (38-98)||(10730252-10730312)
chr6 (28-141)||(2034197-2034310)
chr6 (28-141)||(2255739-2255852)
chr6 (5-141)||(10873968-10874102)
chr6 (28-141)||(29052338-29052451)
chr6 (28-141)||(32675857-32675970)
chr6 (10-141)||(6758614-6758745)
chr6 (28-141)||(10755251-10755361)
chr6 (28-141)||(2027144-2027257)
chr6 (40-141)||(16989729-16989830)
chr6 (2-90)||(9894745-9894833)
chr6 (1-141)||(23239226-23239365)
chr6 (11-114)||(7267763-7267866)
chr6 (54-141)||(7576829-7576916)
chr6 (3-141)||(10687287-10687428)
chr6 (50-136)||(15054558-15054644)
chr6 (28-90)||(21025246-21025308)
chr6 (2-90)||(25430785-25430870)
chr6 (50-112)||(34413346-34413408)
chr6 (2-95)||(715939-716032)
chr6 (2-43)||(12816823-12816864)
chr6 (29-89)||(24625857-24625917)
chr6 (11-70)||(9582495-9582554)
chr6 (56-138)||(13429488-13429571)
chr6 (14-141)||(23314782-23314908)
chr6 (14-141)||(23324949-23325075)
chr6 (27-117)||(4272386-4272476)
chr6 (28-98)||(10054386-10054456)
chr6 (2-43)||(10755205-10755246)
chr6 (1-141)||(34223492-34223633)
chr6 (1-85)||(21871308-21871391)
[»] scaffold1088 (1 HSPs)
scaffold1088 (2-125)||(1273-1396)
[»] scaffold0004 (2 HSPs)
scaffold0004 (28-141)||(227711-227825)
scaffold0004 (2-141)||(242608-242746)
[»] scaffold0006 (2 HSPs)
scaffold0006 (2-136)||(278965-279098)
scaffold0006 (2-86)||(40701-40783)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-139)||(97179-97313)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-141)||(38421-38559)
[»] scaffold0012 (1 HSPs)
scaffold0012 (28-134)||(178505-178612)
[»] scaffold1130 (1 HSPs)
scaffold1130 (1-86)||(2227-2310)
[»] scaffold0512 (1 HSPs)
scaffold0512 (34-141)||(4076-4182)
[»] scaffold0332 (1 HSPs)
scaffold0332 (28-139)||(14716-14827)
[»] scaffold0041 (1 HSPs)
scaffold0041 (27-140)||(108965-109074)
[»] scaffold0157 (1 HSPs)
scaffold0157 (2-141)||(24724-24865)
[»] scaffold0057 (1 HSPs)
scaffold0057 (50-141)||(24357-24448)
[»] scaffold0048 (1 HSPs)
scaffold0048 (4-101)||(59249-59345)
[»] scaffold0091 (2 HSPs)
scaffold0091 (25-65)||(2623-2663)
scaffold0091 (85-136)||(2534-2585)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-101)||(142344-142417)


Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 43577200 - 43577436
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| ||    
T  43577200 ttattttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttataaa 43577299  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataagtgctatccaaacatggcttaaatatgtttttaataaaatactcttaaaaagtgtttcta 201  Q
    |||||||||||||||||||| || |||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577300 tataaaattttcgttagtaaaattttatgaattaacataagctctatcgaaacatggcttaaatatgtttttaataaaatactcttaaaaagtgtttcta 43577399  T
Q  202 ataaaatagtagctttaattgtcaatatggtcggacc 238  Q
    |||||||||| || |||||||||||||||||||||||    
T  43577400 ataaaatagtggccttaattgtcaatatggtcggacc 43577436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 2563337 - 2563476
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| || ||||    
T  2563337 ttattttagaggttatgtaaaataatttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaa 2563436  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||||  |||||||||||||||||||||||||||    
T  2563437 tatacaatttttattagtaagatcttatgaattaacataa 2563476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 19925495 - 19925357
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| | || |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  19925495 ttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaataacaacttatgaa 19925397  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  19925396 tatacaattttcgttagtaagatattatgaattaacataa 19925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 36907755 - 36907612
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttat----aaacttgttaaggtagtttatgaaaaaacaattta 97  Q
    ||||||||||||||||| |||  |||||||||||||||| || ||||||||||||||||||    ||| ||||||||||||||||||||||||||| ||     
T  36907755 ttattttagagcttatgcaaagcagtttatgcaaataaagaagtattaatgtattatttatttataaatttgttaaggtagtttatgaaaaaacaacttg 36907656  T
Q  98 tgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| ||||||||||||||||||||||||||||| |||||    
T  36907655 tgaatatacaattttcgttagtaagatcttatgaattagcataa 36907612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 30973968 - 30974107
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||  || ||||| ||||||| ||  |||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  30973968 ttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaaaaacaacttatgaa 30974067  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | || ||||||||||||||||||||||||||||| |||||    
T  30974068 tttacaattttcgttagtaagatcttatgaattagcataa 30974107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 14262331 - 14262444
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||| ||  |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  14262331 ttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttagtaagatctt 14262430  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  14262431 atgaattaacataa 14262444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 9782209 - 9782301
Alignment:
Q  49 aatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  9782209 aatgtattatttataagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattaacataa 9782301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 2669648 - 2669766
Alignment:
Q  23 atagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaag 122  Q
    |||| ||||||||||||||||    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| | ||||| |||||| |    
T  2669648 atagcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtagg 2669747  T
Q  123 atcttatgaattaacataa 141  Q
    |||||||||||||||||||    
T  2669748 atcttatgaattaacataa 2669766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 37411019 - 37410886
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| |||||||| |||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| || |||||    
T  37411019 ttattttagagcttatataaaacagtttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatgaa 37410921  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
     ||| ||||||||||||||||| ||||| ||||||    
T  37410920 gatacaattttcgttagtaagaacttataaattaa 37410886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 42363423 - 42363285
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||| |||||||||||||||| | || ||||||||||||| || || ||||||||||||||||||||||  ||||||||    
T  42363423 ttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttat-aagtttttaaggtagtttatgaaaaaaccgtttatgaa 42363325  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||| |||||| ||| ||| | |||||| ||||    
T  42363324 gatacaatttttgttagtgagaacttttaaattaaaataa 42363285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 218359 - 218222
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| |||||  ||||||| |||||||||||| || ||||||||||||| || || ||||||||||||||| |||||| |||||||||    
T  218359 ttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaactatttatgaa 218262  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  218261 gatacaattttcgttagtaatagcttataaattaaaataa 218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 694919 - 694782
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| |||||  ||||||| |||||||||||| || ||||||||||||| || || ||||||||||||||| |||||| |||||||||    
T  694919 ttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaactatttatgaa 694822  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  694821 gatacaattttcgttagtaatagcttataaattaaaataa 694782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 699128 - 698991
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| |||||  ||||||| |||||||||||| || ||||||||||||| || || ||||||||||||||| |||||| |||||||||    
T  699128 ttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaactatttatgaa 699031  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  699030 gatacaattttcgttagtaatagcttataaattaaaataa 698991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 731982 - 731845
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| |||||  ||||||| |||||||||||| || ||||||||||||| || || ||||||||||||||| |||||| |||||||||    
T  731982 ttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaactatttatgaa 731885  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  731884 gatacaattttcgttagtaatagcttataaattaaaataa 731845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 855878 - 855741
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| |||||  ||||||| |||||||||||| || ||||||||||||| || || ||||||||||||||| |||||| |||||||||    
T  855878 ttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaactatttatgaa 855781  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  855780 gatacaattttcgttagtaatagcttataaattaaaataa 855741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 12607059 - 12607197
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| ||  ||||||||||||||| | || |||||||||||||||  || ||||||||||||||||||||||  ||||||||    
T  12607059 ttattttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacggtttatgaa 12607157  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||| ||||||| ||| ||||| |||||| ||||    
T  12607158 gatacaatttccgttagtgagagcttataaattaaaataa 12607197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 14942403 - 14942542
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||||||||| |  ||||| | ||||||||   ||  |||||||||||||| ||||||||| |||||||||||||||| | |||||||    
T  14942403 ttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaa 14942502  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||  |||||| ||||| |||| ||||| |||||||||||    
T  14942503 gatgcaatttttgttagcaagaacttataaattaacataa 14942542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 38338957 - 38338819
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || |  ||||||||||||  || ||||||||||||||||||||| | ||||||||    
T  38338957 ttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttt-ttaaggtagtttatgaaaaaatagtttatgaa 38338859  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     |||  |||||||||||| ||| ||||| |||||| ||||    
T  38338858 gatatgattttcgttagtgagaacttataaattaaaataa 38338819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 42102086 - 42102200
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||| || || ||||||||||||||||||||||  || |||||    
T  42102086 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aagtttttaaggtagtttatgaaaaaaccgttaatgaa 42102184  T
Q  102 tataaaattttcgtta 117  Q
     ||| |||||||||||    
T  42102185 gatacaattttcgtta 42102200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 11988185 - 11988314
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatt 110  Q
    ||||||| ||||| | ||||||||||||||||| | || |||||||||||||||  || ||||||||||| ||||||||||  |||||||| ||| ||||    
T  11988185 agcttatataaaacaatttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagttcatgaaaaaaccgtttatgaagatacaatt 11988283  T
Q  111 ttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||| ||| ||||| |||||| ||||    
T  11988284 ttcgttagtgagagcttataaattaaaataa 11988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 19925535 - 19925675
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatg 99  Q
    |||||||||| ||||||  |||| || ||||||||||||||||  | ||||| ||||||||||||  ||||||||||| |||| ||||||||||||||||    
T  19925535 tttattttagggcttatacaaaacagcttatgcaaataaataagcttttaat-tattatttataagtttgttaaggtattttacgaaaaaacaatttatg 19925633  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || ||| ||||||||||||| ||| ||||  |||||| ||||    
T  19925634 aagatacaattttcgttagtgagagcttacaaattaaaataa 19925675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 1184788 - 1184899
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||  |||||||||| ||||| ||  |||||||||||||||||  |||||||| || | |||||| |||||||||||||| ||| ||    
T  1184788 ttatgcaaataaataagcattaatgtatcatttaaaagtttgttaaggtagtttatctaaaaacaacttctaaatatacaattttcgttagtaggatatt 1184887  T
Q  128 atgaattaacat 139  Q
    || |||||||||    
T  1184888 ataaattaacat 1184899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 3664115 - 3664177
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataa 64  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||    
T  3664115 ttattttagagcttatataaaatagtttatgcaaataaataaatttttatgtattatttataa 3664177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 24350604 - 24350487
Alignment:
Q  24 tagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaaga 123  Q
    |||||||||||||||| |||   || || ||||||| |||| ||||| || ||| |||||||||||| |  ||||||| ||| |||||||||||||||||    
T  24350604 tagtttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaaga 24350505  T
Q  124 tcttatgaattaacataa 141  Q
     |||||||||||||||||    
T  24350504 acttatgaattaacataa 24350487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 10299010 - 10298894
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||||||||||||| ||  ||  ||||| ||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |||||| |||| | |||     
T  10299010 agtttatgcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaa 10298911  T
Q  125 cttatgaattaacataa 141  Q
    |||||||||||||||||    
T  10298910 cttatgaattaacataa 10298894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 32131419 - 32131558
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || ||||||||||||||||   || ||| ||||||  |||  |||| ||||||||||||||| ||||||  ||||||    
T  32131419 ttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaa 32131518  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||||  |||| ||| |||||||||||||||||    
T  32131519 gatacaattttcaatagtgagaacttatgaattaacataa 32131558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 37966298 - 37966216
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg 84  Q
    ||||||||||| ||||| ||||||| |||||||||||||||  |||  ||||||||||||||| |||||||| ||||||||||    
T  37966298 ttattttagagtttatgcaaaatagcttatgcaaataaatatttatatatgtattatttataagcttgttaacgtagtttatg 37966216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 32975692 - 32975805
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || ||||||| |||| ||||| ||||||||||||||||| |||| ||||||| ||| |||||| ||| || ||| |||    
T  32975692 ttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaactt 32975791  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  32975792 atgaattaatataa 32975805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 38895664 - 38895777
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||| |||||||  || || ||||||| |||| ||||||||||||||||||||||||| |||||||||| ||| ||| || |||||| | | |||    
T  38895664 ttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaactt 38895763  T
Q  128 atgaattaacataa 141  Q
    || |||||| ||||    
T  38895764 ataaattaatataa 38895777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 8217004 - 8216872
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgt-taaggtagtttatgaaaaaacaatttatgaatataaa 107  Q
    |||||| || ||||||| |||||||||| |||||  | || |||||||||| |||| ||||| |||||||||||||||||||  |  ||||||| ||| |    
T  8217004 gagcttgtgcaaaatagcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagataca 8216905  T
Q  108 attttcgttagtaagatcttatgaattaacata 140  Q
    ||||||||||||||||  || ||||||||||||    
T  8216904 attttcgttagtaagaatttgtgaattaacata 8216872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32924319 - 32924181
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||||| |||| || |||||| ||||||||    || || | |||||||||| |||||| | ||||||||||||||||||| ||||||    
T  32924319 tttatttt-gagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatga 32924221  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||||||||||| ||||| | | |||||||||||| ||||    
T  32924220 agataaaattttc-ttagtgaaaacttatgaattaatataa 32924181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34545714 - 34545621
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    |||||||||||||||||| |||||| ||||||||||||||||  | || |||  ||||||||||  ||||||| |||||||||||||| |||||||    
T  34545714 tttattttagagcttatgcaaaataatttatgcaaataaatatgtctttatg--ttatttataagtttgttaatgtagtttatgaaaacacaattt 34545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 35168500 - 35168410
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt---aagatcttatgaattaac 137  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||| ||||||||| |||   |||| |||||||||||||    
T  35168500 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgtcagttagaagaacttatgaattaac 35168410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38195466 - 38195580
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| |  |||||||||||||||| | || || |||||||||| || || ||||||||||||| ||||||||| |||||| |    
T  38195466 ttattttagagcttatataaaacaacttatgcaaataaataagtttttatatattatttat-aagtttttaaggtagtttacgaaaaaacagtttatgga 38195564  T
Q  102 tataaaattttcgtta 117  Q
     ||| |||||| ||||    
T  38195565 aatacaatttttgtta 38195580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 28280714 - 28280827
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||   ||| |||||||||||||||  ||||||| |||||||||||||||||  ||||||||  || |  ||| |||||| ||| |||    
T  28280714 ttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttgttagtgagaactt 28280813  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  28280814 atgaattaagataa 28280827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 14725021 - 14724933
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||  ||||||| ||| ||||||||||||||| ||||| |  || ||||||||||| ||||| |||||||||||| ||||    
T  14725021 tattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataa 14724933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 23412741 - 23412809
Alignment:
Q  30 atgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    ||||||||| |||| |||| |||||||||| |||||||||| ||  |||||||||||||||||||||||    
T  23412741 atgcaaatatataagtatttatgtattattcataaacttgtcaatatagtttatgaaaaaacaatttat 23412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 32751117 - 32751236
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatga 100  Q
    |||||||||| ||||| | ||| | ||||||||||||||||||| || ||||| |||| || || || |||| |||||||||| |||||||| ||||| |    
T  32751117 ttattttagaacttatattaaacaatttatgcaaataaataaatttttatgtactattaat-aagtttttaaagtagtttatgaaaaaaacattttataa 32751215  T
Q  101 atataaaattttcgttagtaa 121  Q
    | ||| |||||||||||||||    
T  32751216 aaatacaattttcgttagtaa 32751236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 3129985 - 3130104
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatt-tata-aacttgttaaggtagtttatgaaaaaacaat-ttat 98  Q
    |||||||||||||||| |||||||| ||||||||||| || | | || |||||||||| | || || || ||||||||||||||||||||| | | ||||    
T  3129985 ttattttagagcttatataaaatagcttatgcaaatacatcagtttttatgtattattatttataagtttttaaggtagtttatgaaaaaaaattgttat 3130084  T
Q  99 gaatataaaattttcgttag 118  Q
    ||| ||| ||||||||||||    
T  3130085 gaagatacaattttcgttag 3130104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 2019756 - 2019670
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaa 88  Q
    ||||||||||||||||| |||| |  |||||||||||||||| |  | |||||||||||| || ||||||||| |||||||| ||||    
T  2019756 ttattttagagcttatgcaaaacatcttatgcaaataaataagtcattatgtattatttacaagcttgttaagatagtttataaaaa 2019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 9131209 - 9131096
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||| ||||   || ||||||||||||||| |||||  |  |||||| |||| |||||  ||||||| ||| |||||||||||||  || |||    
T  9131209 ttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagtcggaactt 9131110  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  9131109 atgaattaacataa 9131096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 16972465 - 16972332
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgt-taaggtagtttatgaaaaaacaatttatg 99  Q
    ||||||||  |||||||| |||| | ||| |||||||||||||   |  |||||||||| ||||  |||| |||||||||| |||||||||||  |||||    
T  16972465 tttattttttagcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatg 16972366  T
Q  100 aatataaaattttcgttagtaagatcttatgaat 133  Q
    || ||| ||||||||||||| | | |||||||||    
T  16972365 aagatacaattttcgttagtgataacttatgaat 16972332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 28879063 - 28879136
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||   || |||||||||| |||| ||||| |||||||||||||||| ||||| |||||||    
T  28879063 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaa 28879136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 34286644 - 34286532
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||| ||||||||||   || |||||||||| |||| ||||| |||||||||| ||||||| ||  ||||||| ||| ||||||||||||  ||| |||    
T  34286644 ttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaaa-cagcttatgaagatacaattttcgttagggagaactt 34286546  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  34286545 atgaattaatataa 34286532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 1089017 - 1089081
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaac 91  Q
    ||||||||||||||||| | ||||||||||||| |||| ||||| || ||| |||||||||||||    
T  1089017 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaac 1089081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 24867010 - 24866943
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    |||||||||||||||  ||||||| ||||||||||||||||||  |||||||  || |||||||||||    
T  24867010 atgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtta 24866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 35055466 - 35055535
Alignment:
Q  70 ttaaggtagtttatgaaaaaacaa---tttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    ||||||||||||||||||||| ||   |||||||| ||| ||||||||||||| ||| ||||||||||||    
T  35055466 ttaaggtagtttatgaaaaaaaaaccatttatgaagatacaattttcgttagtgagagcttatgaattaa 35055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 19327855 - 19327984
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatt 110  Q
    |||||||| |||| |  |||||||||||||||||  || |||||||||| ||||  ||| ||| |||||||||| ||||||| ||||| || ||| ||||    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttg-taatgtagtttatggaaaaacagtttataaagatacaatt 19327953  T
Q  111 ttcgttagtaagatcttatgaattaacataa 141  Q
    || |||| | ||| ||||| ||| |||||||    
T  19327954 tttgttaatgagaacttataaataaacataa 19327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 41145451 - 41145369
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    ||||||| ||||  ||||||||||||||||||||||||||| || | || |||  |||||| ||||| ||| ||||||||||||    
T  41145451 tattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtgagaacttatgaattaa 41145369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 25333774 - 25333709
Alignment:
Q  66 cttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaa 132  Q
    ||||| |||||||||||||||||| ||| ||||||| ||| ||||||||||||| | | ||||||||    
T  25333774 cttgtcaaggtagtttatgaaaaa-caacttatgaagatacaattttcgttagtgaaaacttatgaa 25333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 2289967 - 2289902
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaa 93  Q
    |||||||||||||||| | || || ||||||  |||| ||||||||| ||||||| ||||||||||    
T  2289967 ttatgcaaataaataagtttttatttattatccataagcttgttaagatagtttaagaaaaaacaa 2289902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 2656522 - 2656567
Alignment:
Q  96 tatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||||||||||||||| ||||||| || ||||||||    
T  2656522 tatgaatatacaattttcgttagtaaaatcttataaactaacataa 2656567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 10213859 - 10213818
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  10213859 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 10213818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 29713169 - 29713222
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtat 55  Q
    |||||||| ||||||| |||||  |||||||||||||||||||| || ||||||    
T  29713169 ttattttaaagcttatataaaacggtttatgcaaataaataaatttttatgtat 29713222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31459025 - 31459113
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||| ||||||||| |||  |||||||| |||||||||||| || || ||||||||||||  |||| ||  |||||||| ||||||    
T  31459025 tttatttt-gagcttatgaaaagcagtttatgtaaataaataaatttttatatattatttataagtttgtcaatatagtttataaaaaaa 31459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 34286486 - 34286527
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  34286486 ttatttttgagcttatgaaaaataggttatgcaaataaataa 34286527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 35453415 - 35453488
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||   || |||||||||| ||||  || | |||||||||||||||||||||  |||||||    
T  35453415 ttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 41145326 - 41145359
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||||| ||||||||||||||||||||||||    
T  41145326 gagcttatgaaaaatagtttatgcaaataaataa 41145359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 3641231 - 3641287
Alignment:
Q  34 aaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||| || |||||| ||||||||  ||||||| ||||| ||||||||||    
T  3641231 aaataaataaatttttatgtataatttataagtttgttaatgtagtatatgaaaaaa 3641287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16706207 - 16706116
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaa 93  Q
    |||||||| ||||||||| ||||  | |||||||||||||||  | || |||||||||| ||||  |||  || |||||||||||||||||||    
T  16706207 tttatttt-gagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaa 16706116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 29218334 - 29218219
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttat--gaaaaaacaatttatgaatataaaattttcgttagtaagatc 125  Q
    |||| |||||| |||| | || ||||||||||| |||  ||||||||||| |||||  ||||||| | |||||||| ||| ||||||| ||||| |||      
T  29218334 ttatacaaatacataagtttttatgtattatttttaagtttgttaaggtattttataagaaaaaatagtttatgaagatataattttcattagtgagagt 29218235  T
Q  126 ttatgaattaacataa 141  Q
    |||| |||||| ||||    
T  29218234 ttataaattaaaataa 29218219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 29243158 - 29243083
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||| ||||| || ||||||||||||||||   || ||||||||||||| || || |||||||||||||| ||||||    
T  29243158 ttatataaaacagcttatgcaaataaataagcttttatgtattatttat-aagtttttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 32131603 - 32131563
Alignment:
Q  3 tattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  32131603 tatttttgagcttatgaaaaatagtttatgcaaatagataa 32131563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 38524090 - 38524206
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  38524090 agtttatgcaaataaataagtattaatgtattatttataaatttgttaaggtagtttatgaaaaaatcatttatgaatatgcaattttcgttagtaagat 38524189  T
Q  125 cttatgaattaacataa 141  Q
    |||||||||||||||||    
T  38524190 cttatgaattaacataa 38524206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 4974290 - 4974429
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||  || ||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  4974290 ttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagtttatgaaaaaacaagttatgaa 4974389  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||| || ||| |||| |||||||||||||||||||    
T  4974390 tatacaatatttgttggtaaaatcttatgaattaacataa 4974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 20175003 - 20174908
Alignment:
Q  46 attaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20175003 attaatgtattatttataaacttgctaagttagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataa 20174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 30383749 - 30383883
Alignment:
Q  4 attttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaata 103  Q
    ||||||||||||||| |||||||||||||| |||||| ||  |||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  30383749 attttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacctatgaata 30383848  T
Q  104 taaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || ||||||| | |||   |||||||||||||||||||    
T  30383849 tacaattttcataagt---atcttatgaattaacataa 30383883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 29614173 - 29614306
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| ||||||||    
T  29614173 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagtttatgaa 29614271  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
     ||| ||||||||||||| ||| ||||| ||||||    
T  29614272 gatacaattttcgttagtgagagcttataaattaa 29614306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 3645282 - 3645415
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| || |||||    
T  3645282 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatgaa 3645380  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
     ||| ||||||||||||| ||| ||||| ||||||    
T  3645381 gatacaattttcgttagtgagagcttataaattaa 3645415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 30473223 - 30473150
Alignment:
Q  29 tatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaat 102  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  30473223 tatgcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaat 30473150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 45049458 - 45049342
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||| |||||||| ||  |||||| |||| |||||||  ||||||||||||||||||| ||||||| |||| |||||||||||||| ||| ||||||    
T  45049458 agtttatacaaataaacaagcattaatatattgtttataagtttgttaaggtagtttatgacaaaacaacttataaatataaaattttcattaataagat 45049359  T
Q  125 cttatgaattaacataa 141  Q
      |||||||||||||||    
T  45049358 gatatgaattaacataa 45049342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 28741321 - 28741182
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| | ||| |||| || |||||||||||||||    || |||||||| |||||| |||||||| ||||||||||||||||||  |||||||    
T  28741321 ttattttagagttcatgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaa 28741222  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||| ||| |||||||||||| ||||    
T  28741221 ggtacaattttcgttagtgagaacttatgaattaagataa 28741182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 20894482 - 20894615
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || ||||||||||||| || || |||| ||||||| |||||||||| || |||||    
T  20894482 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttat-aattttttaatgtagtttttgaaaaaacagttcatgaa 20894580  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
     ||| ||||||||||||| ||| ||||| ||||||    
T  20894581 gatacaattttcgttagtgagagcttataaattaa 20894615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 4257408 - 4257273
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg--aaaaaacaatttatg 99  Q
    |||||||||||||||| ||||| |  |||||||||||||||| | || ||||||||||||| || || |||||||||||||||  |||||||| ||||||    
T  4257408 ttattttagagcttatataaaacaacttatgcaaataaataagtttttatgtattatttat-aagtttttaaggtagtttatgaaaaaaaacagtttatg 4257310  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaa 136  Q
    || ||| |||||||| |||| ||| ||||| ||||||    
T  4257309 aagatacaattttcgctagtgagagcttataaattaa 4257273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 22809301 - 22809161
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||| ||| ||||| |||| || ||||||||||||||||  | || || ||||||| |||| ||||| ||||||||||||||||||||   ||||||    
T  22809301 ttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatga 22809202  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| |||||||||||  |||| |||||||||||||||||    
T  22809201 agatacaattttcgttaagaagaacttatgaattaacataa 22809161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 10448753 - 10448852
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |  |||||||||||||||    || ||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  10448753 ttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaa 10448852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 53218147 - 53218008
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||  |||||||| |||| |  |||||| |||||||||   || |||||||||| |||| ||||| |||||||||||||||||||||| || ||||    
T  53218147 ttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaa 53218048  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||||| |||||| ||||    
T  53218047 gatacaattttcgttagtgagaacttataaattaaaataa 53218008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 584999 - 585137
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||  ||||||||||||| |  ||||||||||||||||   || ||| |||||| | || ||| || ||||||||||||||||||||| |||||||    
T  584999 ttatttttcagcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaa 585098  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacata 140  Q
     ||| |||||||||||||  || |||| |||||||||||    
T  585099 gatacaattttcgttagtttgaacttaagaattaacata 585137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 36266223 - 36266309
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaa 88  Q
    |||||||||||||||| ||||| ||||||||||||||||||||  || |||||||||||||||  ||||||||||| |||| |||||    
T  36266223 ttattttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 40240658 - 40240545
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||| ||   || |||||||||| |||| | |||  ||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| |||    
T  40240658 ttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagctt 40240559  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  40240558 atgaattaagataa 40240545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 141
Target Start/End: Complemental strand, 42956264 - 42956147
Alignment:
Q  24 tagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaaga 123  Q
    ||||| |||||||||||||| | || |||||||||| ||||||||||  | ||||||||||| ||||||  |||| || ||| ||||||||||||| |||    
T  42956264 tagttgatgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgaga 42956165  T
Q  124 tcttatgaattaacataa 141  Q
     ||||| |||||||||||    
T  42956164 acttataaattaacataa 42956147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 51662809 - 51662915
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| |||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||||      | | |||||||||||| ||| |||||    
T  51662809 ttatacaaatagataaacattaatgtattatttataagcttgttaagatagtttatgaaaaaataatt------ttttaaattttcgttaataaaatctt 51662902  T
Q  128 atgaattaacata 140  Q
    |||||||||||||    
T  51662903 atgaattaacata 51662915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 2086798 - 2086690
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||||  ||| || ||||| |||||||||||  || ||||||||||||||| ||||| ||||| ||||||||||||| | ||||||||    
T  2086798 ttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaa 2086699  T
Q  102 tataaaatt 110  Q
     ||| ||||    
T  2086698 gatacaatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 19307985 - 19308053
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaatta 135  Q
    |||||||||||||||||||||||||||  |||||||||| |||||| |||||||| |||||||||||||    
T  19307985 ttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttttgttagtaaaatcttatgaatta 19308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 40581176 - 40581044
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa-aaaacaatttatgaatataaaa 108  Q
    ||||||||| |||| |  ||||||||||||||||   || |||||||||| |||| ||||| ||||||||||||||| ||||||   |||||| | | ||    
T  40581176 gagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaacaa 40581077  T
Q  109 ttttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||| ||| |||||||||||||||||    
T  40581076 ttttcgttagtgagaacttatgaattaacataa 40581044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 1516204 - 1516066
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  ||||||  |||| |||||||||||  ||| |||||||||||||||  ||||||||||| |||||| |||| || ||||| ||    
T  1516204 ttattttagagcttatacaaaataacttattcaaataaataac-atttatgtattatttataagtttgttaaggtattttatggaaaatcagtttataaa 1516106  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||| ||||| ||| ||||| |||||| ||||    
T  1516105 gatacaattttcattagtgagaacttataaattaaaataa 1516066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 37456540 - 37456402
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| ||||  |||| |||| ||  |||||||||||| || |||||||||||||||  || ||||| ||||||||||||||| ||||||| ||    
T  37456540 ttattttagagattataaaaaacagttcatataaataaataaatttttatgtattatttataagttt-ttaagatagtttatgaaaaaataatttataaa 37456442  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||| ||||||||||  |||| |||||| ||||    
T  37456441 gatacaatttttgttagtaagaatttataaattaaaataa 37456402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 48816759 - 48816829
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaac 137  Q
    |||||||||||||||| ||| |||||| ||||||||||| |||||||||| |||||||||||| |||||||    
T  48816759 ttgttaaggtagtttaagaataaacaacttatgaatatacaattttcgttggtaagatcttataaattaac 48816829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 43080015 - 43079906
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || |||| ||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| ||||||||| | | ||| |||    
T  43080015 ttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaactt 43079916  T
Q  128 atgaattaac 137  Q
    ||||||||||    
T  43079915 atgaattaac 43079906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 51409380 - 51409481
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| ||||||| ||||||||||||||||   || || ||||||| || |  |||| |||||||||||||||||||||| ||||||| |||||||    
T  51409380 gagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaaat 51409479  T
Q  110 tt 111  Q
    ||    
T  51409480 tt 51409481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 29830877 - 29830793
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||||||||||||  |||| ||||||||||||||||||| | || ||||||||| ||||   ||||||||||||||||||||    
T  29830877 ttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 34707772 - 34707681
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| |||||||||||||||||||||||||||  | | ||| ||| ||||||||||||  ||| |||| ||||||||||||    
T  34707772 atgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgttagcgagaacttacgaattaacataa 34707681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 30499945 - 30500007
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataa 64  Q
    ||||||||||||||||  |||| ||||||||||||||||||||| || |||||||||||||||    
T  30499945 ttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataa 30500007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 37243490 - 37243584
Alignment:
Q  47 ttaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||| |||||||| |||||||||||||||| | ||||||||  || | ||||| || || ||| |||||||||||| ||||    
T  37243490 ttaatgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtacacttttcattggtgagaacttatgaattaagataa 37243584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 37601108 - 37601034
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaat 102  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||  | |||||| ||||||||    
T  37601108 ttatgcaaataaataaacgttaatgtattatttataagcttgttaagatagtttatagagaaacaacttatgaat 37601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30917602 - 30917513
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||||  || ||| |||||| | ||||||||||||||||||| || |||||||||||||||| || ||||||| |||||| ||||||    
T  30917602 tttattttttagtttaagtaaaacaatttatgcaaataaataaatttttatgtattatttataaaattattaaggttgtttataaaaaaa 30917513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 45331376 - 45331263
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||| ||||||||||   || |||||||||  |||| |||||||||  ||||||||||||||||  ||||||| ||| |||||||| ||| |||| | |    
T  45331376 ttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacat 45331277  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  45331276 atgaattaacataa 45331263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 43971889 - 43971827
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttat 129  Q
    |||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||    
T  43971889 ttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttat 43971827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 47403868 - 47403730
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatg 99  Q
    |||||||| ||||||||| |||| ||| ||  ||||||||||| | || | |||||||| ||||| |||| || |||||||||| |||||| ||||||||    
T  47403868 tttatttt-gagcttatgaaaaagagtata--caaataaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatg 47403772  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || ||| |||||||||| || ||  ||||| |||||||||||    
T  47403771 aagatacaattttcgtttgtgagggcttataaattaacataa 47403730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 32901229 - 32901128
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||| ||||||||||   || || ||||||| | ||| |||||||| |||||||| | ||||||| ||||||| ||||||||||||||||| ||| |||    
T  32901229 ttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgagaactt 32901130  T
Q  128 at 129  Q
    ||    
T  32901129 at 32901128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 5129897 - 5129833
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaac 91  Q
    ||||||||||||||||| | ||||||||||||| |||| ||||| || ||| |||||||||||||    
T  5129897 tttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaac 5129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 33946590 - 33946518
Alignment:
Q  69 gttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||| ||||||||||| ||| ||||| | ||||||||||||||| | ||| |||||||||||| ||||    
T  33946590 gttaaggtaatttatgaaaaaccaacttatgtagataaaattttcgttaatgagaacttatgaattaatataa 33946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 42381284 - 42381228
Alignment:
Q  85 aaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||| |||||| ||||    
T  42381284 aaaaaacagtttatgaagataaaattttcgttagtaagagcttataaattaaaataa 42381228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 17752162 - 17752099
Alignment:
Q  78 gtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| | || |||||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  17752162 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataa 17752099  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 19053482 - 19053419
Alignment:
Q  78 gtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| | || |||||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  19053482 gtttatgaaagatcagtttatgaagatacaattttcgttagtaagaacttataaattaacataa 19053419  T

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Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 24842188 - 24842074
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgt-taaggtagtttatgaaaaaacaatttatgaatata-aaattttcgttagtaagatc 125  Q
    |||||||||||||||||| || |||||||||| ||||  ||||  || ||| |||||| |||||||| ||||||| ||| || ||||||||||||| | |    
T  24842188 ttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatg-aaaaacaacttatgaagatacaatttttcgttagtaaaaac 24842090  T
Q  126 ttatgaattaacataa 141  Q
    |||| |||||||||||    
T  24842089 ttataaattaacataa 24842074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 33468209 - 33468118
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttat-----gaaaaaacaatttatgaatataaaattttc 113  Q
    ||||||||||||| |||  |||||  |||||||||||||||||||| ||||||||||      |||||||| |||||||||||| |||||||    
T  33468209 tttatgcaaataagtaagcattaacatattatttataaacttgttatggtagtttatataaaaaaaaaacattttatgaatatacaattttc 33468118  T

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Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 53787827 - 53787720
Alignment:
Q  34 aaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaat 133  Q
    ||||||||| || || |||||||| |||||| ||| ||||  ||||||| ||||||||| ||||| || ||| |||||| |||| | ||| |||||||||    
T  53787827 aaataaatatatttttatgtattacttataagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaat 53787728  T
Q  134 taacataa 141  Q
    ||| ||||    
T  53787727 taagataa 53787720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 31787686 - 31787644
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaa 44  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  31787686 ttatttttgagcttatgaaaaatagtttatgcaaataaataaa 31787644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 32900784 - 32900730
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaa 107  Q
    ||||||| ||||||||||||||||||||| |||||||| || ||||||| |||||    
T  32900784 tattattcataaacttgttaaggtagtttgtgaaaaaataacttatgaagataaa 32900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 52021251 - 52021353
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||    || |||||||||| ||||  |||| ||||||||||||| ||||||||  ||||||| ||| ||||||||||||| ||| ||    
T  52021251 ttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgagaact 52021350  T
Q  127 tat 129  Q
    |||    
T  52021351 tat 52021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 52421218 - 52421132
Alignment:
Q  32 gcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttag 118  Q
    ||||||||||||   || |||||||||| |||| ||||| ||||||||||||||||||| | || ||||| ||| |||||| |||||    
T  52421218 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttag 52421132  T

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Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 3870307 - 3870194
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||| ||||||   || |||| || || |||| ||||| ||||||||||||||||||||||  |||||  ||| | ||||| ||| | ||| |||    
T  3870307 ttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgatacacttttcattaatgagaactt 3870208  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  3870207 atgaattaacataa 3870194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 29830685 - 29830607
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaa----tttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||||| ||    |||||||| ||| ||||||||||||| ||| ||||| |||||| ||||    
T  29830685 ttgttaaggtagtttatgaaaaaaaaaacagtttatgaagatacaattttcgttagtgagaacttataaattaaaataa 29830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 48597903 - 48597834
Alignment:
Q  73 aggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt-atgaattaacataa 141  Q
    ||||||| ||||||||||||| ||||||| ||| ||||||||| ||| ||| ||| ||||||||||||||    
T  48597903 aggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataa 48597834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 3876319 - 3876231
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||| || ||||||||||||||||||||||||| ||| |||  |||| |||| ||||||   | |||||||||||| ||||    
T  3876319 tattattcataatctagttaaggtagtttatgaaaaaacaacttaagaaggtaaagtttttgttagttctaacttatgaattaatataa 3876231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 17383484 - 17383572
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||||||| |||| |||||||| ||||||||||||||||   || ||||| |||||||||  |||||| |||| ||| | ||||||    
T  17383484 ttattttagagtttatataaaatagattatgcaaataaataagattttatgtaatatttataagtttgttagggtattttgttaaaaaa 17383572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 23816208 - 23816140
Alignment:
Q  72 aaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacata 140  Q
    |||||||||||||||||||||  ||||||| ||| || ||| || ||| ||| ||||||||||||||||    
T  23816208 aaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtgagaacttatgaattaacata 23816140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 42409998 - 42409942
Alignment:
Q  85 aaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| |||||||| |||||||| |||||||||||| ||||| |||||| ||||    
T  42409998 aaaaaacagtttatgaagataaaattctcgttagtaagagcttataaattaaaataa 42409942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 10272129 - 10272237
Alignment:
Q  30 atgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttat 129  Q
    |||||||||||||||  || |||||||||| |||| |||   |||| ||||| ||||||||||  ||||||  ||| || |||||||  ||||| |||||    
T  10272129 atgcaaataaataaacttttatgtattattcataagcttc--aaggcagtttctgaaaaaacagcttatgaggatacaaatttcgttcataagaacttat 10272226  T
Q  130 gaattaacata 140  Q
    |||||||||||    
T  10272227 gaattaacata 10272237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 37778161 - 37778251
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||| ||| || |||||||||||||||||||||    ||||||| ||| |||||| |||||| ||| ||||| |||||| ||||    
T  37778161 atgtattatttagaaattt-ttaaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgagaacttataaattaaaataa 37778251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 43376719 - 43376762
Alignment:
Q  47 ttaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||    
T  43376719 ttaatgtattatttataagcttgttaatgtagtttatgataaaa 43376762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 11528918 - 11528980
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    |||||||||| ||||| ||||||| ||||||||||| |||| || ||||||| ||| ||||||    
T  11528918 atgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagatataatttt 11528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 10521181 - 10521250
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    |||||||||| |||| ||||| || ||||||||||||| |||| |||||||| ||| || ||| ||||||    
T  10521181 atgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagt 10521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 10667425 - 10667494
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    |||||||||| |||| ||||| || ||||||||||||| |||| |||||||| ||| || ||| ||||||    
T  10667425 atgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagt 10667494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 36638936 - 36638871
Alignment:
Q  76 tagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||||||||| | |||||| ||||||||||| | | | ||||| |||||||||||    
T  36638936 tagtttatgacaaaacaatttttaaatatataattttcgttattgaaaacttataaattaacataa 36638871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 50022063 - 50022022
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||||||| ||||| |||| |||||||||||||||||||    
T  50022063 ttattttagagattatgcaaaacagtttatgcaaataaataa 50022022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 7124729 - 7124665
Alignment:
Q  75 gtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacat 139  Q
    ||||||||||||||||||  | ||||| ||| |||||| |||| ||||| ||||| |||||||||    
T  7124729 gtagtttatgaaaaaacacatgatgaagatacaatttttgttaataagaacttatcaattaacat 7124665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 21296745 - 21296833
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||| ||| ||||| |||| | ||||||||||||||||| | || || ||||||| |||   || | |||||||||||||||||||    
T  21296745 ttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaaa 21296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 41601412 - 41601344
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    |||||||||||||| | | || ||||||||||  |||  |||||||| ||||||||||||| |||||||    
T  41601412 ttatgcaaataaatcagtttttatgtattattcttaagtttgttaagttagtttatgaaaatacaattt 41601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 15413971 - 15414110
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||  ||||||||| |||||||    
T  15413971 ttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaa 15414070  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  15414071 tatacaatttttgttagtaagatcttatgaattaacataa 15414110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40416080 - 40415940
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||| ||||||||||| |||| |  |||||||||||| |||| |||||||||||||||||||  |||||||||||||| |||||||||||| ||| ||    
T  40416080 tttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaaaacaacttaaga 40415981  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||    
T  40415980 atatacaatttttgtttgtaagatcttatgaattaagataa 40415940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 43318982 - 43319121
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |  |||||||||||||||  | || ||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  43318982 ttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaa 43319081  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||| ||| |||||||||||| ||||    
T  43319082 ggtataattttcgttagtgagaacttatgaattaagataa 43319121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 29922297 - 29922157
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||||| |||| ||||||||||||||||||| | || |||||||||| |||| ||||| ||||||||||||||||| |||  |||||     
T  29922297 tttatttttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgc 29922198  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||| ||||||  ||||| ||| |||||||||||| ||||    
T  29922197 atatacaattttttttagtgagagcttatgaattaatataa 29922157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 4728825 - 4728962
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || ||||||||| ||  || || ||||||||||||||||||||||| ||||||||    
T  4728825 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatcta-caagtttttaaggtagtttatgaaaaaacagtttatgaa 4728923  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||| ||||||||| ||||| |||||| ||||    
T  4728924 -atataattttccttagtaagagcttataaattaaaataa 4728962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 5203540 - 5203402
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| |||| |||||||||||||||| || |||||||||||||||| ||||  |||||||||    
T  5203540 ttattttagagcttatataaaacagcttatgcaaataaataagtatttatgtattatttataaa-tttttaaggtagtttatgagaaaatcatttatgaa 5203442  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| || ||| |||||  ||| ||||| |||||| ||||    
T  5203441 gatacaaattttgttagagagagcttataaattaaaataa 5203402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15363990 - 15364079
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||| |||||||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  15363990 tttattttagagtttatgtaaatcagtttatacaaataaatatatattaatgtattatttataaacttgttaagataatttttgaaaaaa 15364079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 25332345 - 25332233
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatga--aaaaacaatttatg 99  Q
    ||||||||||| ||||||||||||| ||||||||||||||||  |||||| ||||||||||||  ||||||||||| |||||||  ||||| || |||||    
T  25332345 ttattttagagtttatgtaaaatagcttatgcaaataaataagcattaatatattatttataagtttgttaaggtaatttatgaagaaaaaaaaattatg 25332246  T
Q  100 aatataaaatttt 112  Q
    |||||| ||||||    
T  25332245 aatatataatttt 25332233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 39990581 - 39990694
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| |||||||||||| ||||||||||||||||||   ||||||||||| ||||||||||||||  ||| ||||||| ||||||  ||||||| |||||    
T  39990581 ttatacaaataaataaacattaatgtattatttatatgtttgttaaggtaatttatgaaaaaacatcttaagaatatacaatttttattagtaaaatctt 39990680  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  39990681 atgaattaagataa 39990694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 6026092 - 6025953
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||||||||||||  |||||||||||||||||||||||  | ||| ||||||||||||||  ||||||| |||||||||||||||||  ||||| |    
T  6026092 tttattttagagcttatacaaaatagtttatgcaaataaatatgtttta-tgtattatttataattttgttaacgtagtttatgaaaaaacggtttataa 6025994  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| |||||| |||| | | | |||||||||||| ||||    
T  6025993 agatacaatttttgttaattataacttatgaattaagataa 6025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 26002976 - 26003115
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  |||| ||||||||||||||||||| | || |||||||||||||||  |||||||| || |||||||||||    ||||||||    
T  26002976 ttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatgaa 26003075  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||| | |||||| ||||    
T  26003076 gatacaattttcgttagtgagagcttgtaaattaaaataa 26003115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 42852001 - 42852139
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| | ||||||| |||| || |||| |||||||||||   || |||||||||| |||| ||||| ||| |||||||||||||||||| |||| ||    
T  42852001 ttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttat-aa 42852099  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| |||||||||||||||||    
T  42852100 aatacaattttcgttagtgagaacttatgaattaacataa 42852139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 15122524 - 15122636
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| |  ||||||||| |||||| | || |||||||||||||||  || ||||||||||||||||||||||| ||||||||    
T  15122524 ttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgaa 15122622  T
Q  102 tataaaattttcgt 115  Q
     ||| |||||||||    
T  15122623 gatacaattttcgt 15122636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 28625485 - 28625598
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || | |||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| ||||||||||||| ||| | |    
T  28625485 ttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacct 28625584  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  28625585 atgaattaacataa 28625598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 780674 - 780587
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||||||| ||||| |||||||||||||||||| || || ||||||||||||| || || |||||||||||||||||||||    
T  780674 ttattttagagcttatataaaacagtttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaa 780587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 36206153 - 36206061
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaac-aatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||  ||||||||||| ||||| ||||||  || ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  36206153 atgtattatttataagtttgttaaggtaatttataaaaaaaataacttatgaatatacaattttcgttagtaagatcttatgaactaacataa 36206061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40152983 - 40152844
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||| |||| ||||| | |||||  |||||||||| | || || ||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  40152983 tttatttt-gagtttatctaaaacaatttatataaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatga 40152885  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||||||||||||||  | ||| |||||||||||| ||||    
T  40152884 agataaaattttcgttcttgagaacttatgaattaatataa 40152844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 13060697 - 13060570
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||||||||| |  ||||||||||||||||   || ||||||| || |||| ||||| |||||||||||||||||||||  |||||||  ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  114 gttagtaagatcttatgaattaacataa 141  Q
    |||||| ||| |||||||||||||||||    
T  13060597 gttagtgagaacttatgaattaacataa 13060570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 16722006 - 16722144
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| |||||||  |||||| ||||||||||||||||| | || |||||||||||||||| || ||||||||||||| ||| ||||  ||||||||    
T  16722006 ttattttaaagcttatagaaaataatttatgcaaataaataagtttttatgtattatttataaa-tttttaaggtagtttacgaagaaaccgtttatgaa 16722104  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| | ||||||||||| |||  |||| |||||| ||||    
T  16722105 gatacacttttcgttagtgagagtttataaattaagataa 16722144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 29659067 - 29659178
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||  | || ||||||||||||||| |||||||| |||||||| ||||||||| ||||||||  || ||||||| ||||| ||| |||    
T  29659067 ttatgcaaataaata--tgtttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgagaactt 29659164  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  29659165 atgaattaagataa 29659178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 29418833 - 29418720
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||  | || ||||||||||||||| | || ||| |||||||||||||||||||||||||||  || ||||||||||||| |||  ||    
T  29418833 ttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaattt 29418734  T
Q  128 atgaattaacataa 141  Q
    || |||||| ||||    
T  29418733 ataaattaagataa 29418720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 41419531 - 41419619
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| ||||||||||||| ||| ||||| |||||||||||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataa 41419619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 20458664 - 20458538
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||||||||||||| || || ||||||||||||| || || |||||||||||||| ||||||    |||||||    
T  20458664 ttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttataaaaaaatgtgttatgaa 20458566  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
     ||| |||||||||| || ||| |||||    
T  20458565 aatacaattttcgttggtcagaacttat 20458538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 33757067 - 33757165
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||| || || ||||| ||||||||||||||||| || |||||    
T  33757067 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aagtttttaagctagtttatgaaaaaacagttaatgaa 33757165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 10537318 - 10537236
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaaca 92  Q
    |||||||||||||| || ||||||||||||||||   || ||||||||||||||| ||||| ||| |||||||||||||||||    
T  10537318 gagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaaca 10537236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 12987109 - 12986988
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||||||||| |  ||||||||||||||||   || ||||||| || |||| ||||| ||||||||||||||||||||| ||||||||  ||  |||||     
T  12987109 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccattttt 12987010  T
Q  114 gttagtaagatcttatgaatta 135  Q
    |||||| ||| |||||||||||    
T  12987009 gttagtgagaacttatgaatta 12986988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 17657247 - 17657360
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || |||||||||| |||| ||||  |  ||||||||||||||||||  ||||||| |||  |||||||||||| ||| |||    
T  17657247 ttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaactt 17657346  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  17657347 atgaattaacataa 17657360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 1372100 - 1371963
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| |||||||| ||||||||| |  || ||||||||||||||| ||||| || || |||||||| |||||| || |||||    
T  1372100 ttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatga-aaaacagttgatgaa 1372002  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||  ||||||||||| | ||| ||||| |||||||||||    
T  1372001 gatttaattttcgttaatgaga-cttataaattaacataa 1371963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 1868873 - 1868964
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| | || ||||| |||||||||||||||||| ||| ||||||| ||| ||||||||||||| ||| | ||| |||||||||||    
T  1868873 atgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaacgtatcaattaacataa 1868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 7364408 - 7364277
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    |||||||||||||| || | ||||||| ||||||   |  || ||||||| |||| |||||||||||||||||| || |||||| ||||||| ||| |||    
T  7364408 gagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaat 7364309  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
     || |||||| ||| |||||||||||| ||||    
T  7364308 atttgttagtgagaacttatgaattaatataa 7364277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 23087838 - 23087747
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||| ||||||||  |||||||||||||||||| | |||||  || |||||| |||||| ||| |||||||||||| ||||    
T  23087838 atgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataa 23087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 28357379 - 28357470
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||  ||||||| |||||||||||||||||| ||||||||  |  ||||||||||||| ||| |||| ||||||| ||||    
T  28357379 atgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgagaacttacgaattaagataa 28357470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 17128257 - 17128351
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    ||||||| ||||||||| |||| || ||||||||||||||||   || |||||||||| |||||||| | || |||||||||||||| |||||||    
T  17128257 ttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaattt 17128351  T

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Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 1576620 - 1576748
Alignment:
Q  12 gcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattt 111  Q
    ||||||| |||| || ||| |||||||||||||  || ||||||| || |||| ||||| || |||||||||| |||||||| || |||| ||| |||||    
T  1576620 gcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1576718  T
Q  112 tcgttagtaagatcttatgaattaacataa 141  Q
    | |||||| ||| |||| ||||||||||||    
T  1576719 ttgttagtgagaacttaagaattaacataa 1576748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 1608195 - 1608067
Alignment:
Q  12 gcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattt 111  Q
    ||||||| |||| || ||| |||||||||||||  || ||||||| || |||| ||||| || |||||||||| |||||||| || |||| ||| |||||    
T  1608195 gcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1608097  T
Q  112 tcgttagtaagatcttatgaattaacataa 141  Q
    | |||||| ||| |||| ||||||||||||    
T  1608096 ttgttagtgagaacttaagaattaacataa 1608067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 41059870 - 41059757
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||| ||||||   || |||||||||| |||| ||| | ||||| |||||||||||| ||  ||||||| ||  ||||||||||||| ||| |||    
T  41059870 ttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaactt 41059771  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  41059770 atgaattaacataa 41059757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 12467269 - 12467377
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    ||||||||||||||||   || |||||||||| |||| ||||| ||||||||||||| ||||||||  ||||||| | | |||||| |||||| ||| ||    
T  12467269 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtgagaact 12467368  T
Q  127 tatgaatta 135  Q
    |||||||||    
T  12467369 tatgaatta 12467377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 17668379 - 17668466
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||||||| ||||| |  |||||||||||||||  | || ||||||||||||| || || |||||||||||||||||||||    
T  17668379 ttattttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttat-aagtttttaaggtagtttatgaaaaaa 17668466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 33667499 - 33667412
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||  || || |||||||||||||||| ||||    
T  33667499 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta-caagtttttaaggtagtttatgacaaaa 33667412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtt 116  Q
    ||||||||||||||||   || |||||||||| |||| ||||| ||||||||||| |||||||||  ||||||| ||| ||||||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 15709998 - 15709860
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| |  |||||||||||||||| | ||  |||||||||||| || || |||| ||||||||||||||||   || ||| |    
T  15709998 ttattttagagcttatataaaacaacttatgcaaataaataagtttttctgtattatttat-aagtttttaaagtagtttatgaaaaaatcgttaatgta 15709900  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||| ||||||| | ||||| |||||| ||||    
T  15709899 gatacaattttcattagtaaaagcttataaattaaaataa 15709860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 24030194 - 24030332
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||  |||||||  |||| || |||| |||||||||||   || |||||||||| |||| ||||| || ||||||||||||||||| | ||  ||     
T  24030194 ttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaac-acttgcgag 24030292  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| |||||||||||||||||    
T  24030293 gatacaattttcgttagtgagaacttatgaattaacataa 24030332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 27981993 - 27981880
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||| |||||||||||| || |||||||||| ||||| || || ||||| ||||||||||||||| | || || ||||||   | |||| ||||| |||    
T  27981993 ttatgaaaataaataaatttttatgtattattcataaatttatttaggtaatttatgaaaaaacaactaataaagataaaaaaattgttaataagaactt 27981894  T
Q  128 atgaattaacataa 141  Q
    || |||||||||||    
T  27981893 ataaattaacataa 27981880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 11191623 - 11191497
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||| |||||| |||||| |||||  ||||||||||| |||||| ||| | |||       ||||||||||||||  ||||||||| |||||||    
T  11191623 ttattttagaacttatgcaaaataatttataaaaataaataaacattaatttataagtta-------gttaaggtagtttac-aaaaaacaacttatgaa 11191532  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
    |||| || ||| |||||||| || |||||||||||    
T  11191531 tatataaattttgttagtaaaatattatgaattaa 11191497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 22202043 - 22201959
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||| ||||||||| |||| || ||||| ||||||||||   || |||||||||| |||| ||||| |||||||||||||||    
T  22202043 ttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 40452533 - 40452445
Alignment:
Q  54 attatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata-aaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||| |||| ||||| ||||||||||||||| |||||  ||||||| ||| || ||||||||||| ||| ||||||||| |||||||    
T  40452533 attattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataa 40452445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 2670057 - 2670140
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaa 88  Q
    |||| |||||||||||||| |||||||||||||||| ||   || ||||| |||| ||||  |||| |||||||||||||||||    
T  2670057 tttttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 3977483 - 3977591
Alignment:
Q  31 tgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatg 130  Q
    ||||||||||||||  ||  || |||||| |||| ||||| ||||||||||||||||||||| ||||||  |||  || ||| |||||| ||| | ||||    
T  3977483 tgcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg--tatctaacttttgttagtgagaacgtatg 3977580  T
Q  131 aattaacataa 141  Q
    |||||||||||    
T  3977581 aattaacataa 3977591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 11991284 - 11991422
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||  ||||||| |||| |  ||||| ||||||||||   || ||||||||||||||| ||||| ||  | |||||||||||||  | |||||||    
T  11991284 ttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaa-tagttatgaa 11991382  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| |||  |||| |||||||||||    
T  11991383 catacaattttcgttagtgagagtttataaattaacataa 11991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 11912182 - 11912072
Alignment:
Q  29 tatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctta 128  Q
    ||||| |||||||||   || ||||||| || |||| ||||| || ||||||| |||||||| |  ||||||| ||| |||||| |||||| ||| ||||    
T  11912182 tatgctaataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaactta 11912083  T
Q  129 tgaattaacat 139  Q
    |||||||||||    
T  11912082 tgaattaacat 11912072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 13625602 - 13625488
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatga-aaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||    || || ||||||| |||| |||||| ||||||||||||| |||||||  |||| || ||||||||||||||||| | | ||    
T  13625602 ttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaact 13625503  T
Q  127 tatgaattaacataa 141  Q
    ||| |||||| ||||    
T  13625502 tataaattaatataa 13625488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 28357169 - 28357235
Alignment:
Q  51 tgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    ||||||||||| || ||||| || ||||||||||||||||||  ||||||| ||| |||||||||||    
T  28357169 tgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtta 28357235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 40697006 - 40697124
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa-----aaaacaatttatgaatataaaattttcgttagtaag 122  Q
    |||||||||||||||| | || ||||||||||||||| ||||| |||||| ||||||||     ||||||  ||||||| ||| |||||| |||  | |     
T  40697006 ttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaatttttgttcctgaa 40697105  T
Q  123 atcttatgaattaacataa 141  Q
    | |||||||||||||||||    
T  40697106 aacttatgaattaacataa 40697124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 1473361 - 1473454
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata-aaattttcgttagta 120  Q
    ||||||||||||||||   || |||||||||| |||| ||||| ||| || ||||||||||||||  ||||||| ||| || ||||||||||||    
T  1473361 ttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaatttttcgttagta 1473454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2531304 - 2531388
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    |||||||||||| |||| ||||| |  |||||||||||||||| |  | ||||||||||||| || || |||||||||||||||||    
T  2531304 tttattttagagtttatataaaacaacttatgcaaataaataagttgttatgtattatttat-aagtttttaaggtagtttatgaa 2531388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 2577477 - 2577396
Alignment:
Q  61 ataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt-cgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||| |||||| ||||||||||||||| || | || ||| |||||| ||||||| ||| |||||||||||||||||    
T  2577477 ataagcttgtcaaggtaatttatgaaaaaacaacttgtaaaaatacaatttttcgttagtgagaacttatgaattaacataa 2577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 38461341 - 38461272
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    |||||||||||||||  |||| || ||| |||||||||||||| |||||||| ||| |||||| ||||||    
T  38461341 atgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagt 38461272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 3536221 - 3536337
Alignment:
Q  23 atagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaag 122  Q
    ||||||||||||||||| ||||| || ||||||||||||||   |||| ||| || ||||| ||| || || || | || ||| |||| | |||||||||    
T  3536221 atagtttatgcaaataactaaatttttatgtattatttatatgtttgtcaagttattttataaaataaaaacttctaaagatacaattcttgttagtaag 3536320  T
Q  123 atcttatgaattaacat 139  Q
    |  ||||||||||||||    
T  3536321 aatttatgaattaacat 3536337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 6144776 - 6144856
Alignment:
Q  61 ataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||| |||||| |||||||||||| |  ||||||||||| |||||| |||||  ||| |||||||||||| ||||    
T  6144776 ataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaattaatataa 6144856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 18602592 - 18602691
Alignment:
Q  12 gcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaatt 110  Q
    |||||||||||  || ||||||||| || ||| | || || ||||||| |||| ||||||||||||| ||||| ||||||||| ||||||||||| ||||    
T  18602592 gcttatgtaaaccagcttatgcaaagaa-taagtttttatttattattcataagcttgttaaggtagcttatgaaaaaaacaacttatgaatatacaatt 18602690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 35536883 - 35536955
Alignment:
Q  61 ataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaat 133  Q
    |||| ||||| ||| |||||||||||||||||  ||||||| ||| ||||||||||| | ||| |||||||||    
T  35536883 ataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatgaat 35536955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 2577350 - 2577393
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaat 45  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  2577350 ttatttttgagcttatgaaaaatagcttatgcaaataaataaat 2577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 36106829 - 36106758
Alignment:
Q  19 taaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||  ||| |||||||||||| | || |||||| ||| ||||| ||||||||||||||||||| ||||    
T  36106829 taaaataacttacgcaaataaataagtttttatgtatgattcataaatttgttaaggtagtttatgagaaaa 36106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 9477380 - 9477454
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||| ||||||||||||| || |||||  || ||||||||||| | ||| |||||||||||| ||||    
T  9477380 ttgttaatgtaggttatgaaaaaacagttcatgaaggtacaattttcgttactgagaacttatgaattaagataa 9477454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 22573640 - 22573726
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    ||||||||| |||| |  |||||||||||||| | | ||  ||||||||||||||  |||| || |||||||||||||| |||||||    
T  22573640 gagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaatacaattt 22573726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 27805947 - 27806033
Alignment:
Q  55 ttatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||  ||||| || ||||||||||||||||||  |||| || ||| |||||| |||||| | | ||||| |||||||||||    
T  27805947 ttatttatacgcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtgaaaacttataaattaacataa 27806033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 2502815 - 2502730
Alignment:
Q  13 cttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    |||||| |||| || |||| |||||||| || | ||||| ||||||| || | |||||||| |||||||||||| || ||||||||    
T  2502815 cttatgcaaaagagcttatacaaataaacaagttttaatttattattcatgagcttgttaaagtagtttatgaataatcaatttat 2502730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 8550109 - 8550249
Alignment:
Q  3 tattttagagcttatgtaaaatagtttatgcaaataaataaata----ttaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    |||||| || |||||| ||||||||||||  |||||||||||||    || |||||||| |||| |||| || || |||| |||||||||| ||  ||||    
T  8550109 tatttttgaacttatgcaaaatagtttatataaataaataaataaacttttatgtattacttat-aactagtcaaagtag-ttatgaaaaatcagcttat 8550206  T
Q  99 gaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     || ||| || |||||||||| |||  ||||||||||||||||    
T  8550207 aaaaatacaactttcgttagttagaatttatgaattaacataa 8550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 32508187 - 32508158
Alignment:
Q  61 ataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||||||||||||||||||||||||||    
T  32508187 ataaacttgttaaggtagtttatgaaaaaa 32508158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 40452399 - 40452440
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  40452399 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 40452440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 41059711 - 41059752
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| |||| |||||||||||||||||||    
T  41059711 ttatttttgagcttatgaaaaacagtttatgcaaataaataa 41059752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 42558639 - 42558680
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  42558639 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 42558680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 1943015 - 1943083
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    |||||||| ||||||| | || |||||||||  |||| ||||| ||||||||||||||| | |||||||    
T  1943015 ttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaagatacaattt 1943083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 5559981 - 5559887
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaa---caatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| || |||| || || |||||||||||||||||||   ||  ||||||| ||| ||||||||||||| |||  ||||||||| ||||||    
T  5559981 atgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgttagtgagaatttatgaatttacataa 5559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 11707015 - 11706915
Alignment:
Q  12 gcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattt 111  Q
    ||||||| |||| ||  |||||||||||||||   || |||||| |||  ||||||||| || ||| |||||||| |||||| ||||||| ||| |||||    
T  11707015 gcttatgcaaaacagcctatgcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaattt 11706916  T
Q  112 t 112  Q
    |    
T  11706915 t 11706915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 42808873 - 42808945
Alignment:
Q  45 tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    |||| |||||||||| ||||  |||| ||  ||||| ||| |||||||||||||||| ||| |||||||||||    
T  42808873 tattgatgtattattcataagtttgtaaacatagttaatgcaaaaacaatttatgaagatacaattttcgtta 42808945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 43268702 - 43268634
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    ||||||||||||||||   || |||||||||| |||| || || ||||||||||||||| | |||||||    
T  43268702 ttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaagatacaattt 43268634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 16708782 - 16708917
Alignment:
Q  6 tttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata 105  Q
    |||||||||||| ||||   | ||||||||||||| ||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  16708782 tttagagcttatataaaccggcttatgcaaataaagaaatattaatgtactatttataaatctgttaaggttgtttatgaaaaaacaatttatgaatata 16708881  T
Q  106 aaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||||||| |||||||||||||||||||||||||||    
T  16708882 caattttcattagtaagatcttatgaattaacataa 16708917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 51162252 - 51162387
Alignment:
Q  6 tttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata 105  Q
    ||||||||||||| ||| ||| ||||||||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||    
T  51162252 tttagagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatata 51162351  T
Q  106 aaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||||||||||| ||||||||||| |||||||||||    
T  51162352 caattttcgttaataagatcttataaattaacataa 51162387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 34265580 - 34265685
Alignment:
Q  34 aaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaat 133  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | || ||| |||| ||||||||||| |||    
T  34265580 aaataaataaatattaatgtattatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatagacaaattttgttaataagatcttataaat 34265679  T
Q  134 taacat 139  Q
    ||||||    
T  34265680 taacat 34265685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 37157025 - 37156888
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| |||||||| |||  || ||||||||||||||||  |||||||||||||||||||   ||||||||||||||||||||||  ||  ||||||    
T  37157025 ttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaa--aacctatgaa 37156928  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  37156927 tatacaattttcgctagtaagatcttatgaattaacataa 37156888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 3116168 - 3116030
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| ||||| || |||||||||||||||||| || |||| || |||||||  || |||||||||||||||||||||| |||||||||    
T  3116168 ttattttatagcttatataaaacagcttatgcaaataaataaatttttatgttttgtttataagttt-ttaaggtagtttatgaaaaaaccatttatgaa 3116070  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||||||||||| |||||| ||||    
T  3116069 gatacaattttcgttagtaagatcttataaattaaaataa 3116030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 29333396 - 29333535
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||| |||||| |||  ||  ||| ||||||||||| ||||||||||||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  29333396 ttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaa 29333495  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||||||| ||| |||| |||||||||||||||    
T  29333496 tatacaattttcgttcgtacgatcatatgaattaacataa 29333535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37712046 - 37712185
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||| ||| |||| ||||||||||||| |||||   || |||||| ||| |||| ||||| |||||||||||||||||||||| ||||||    
T  37712046 tttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatga 37712144  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| || |||||||||||||| |||||||||||||||||    
T  37712145 agatacaactttcgttagtaagaacttatgaattaacataa 37712185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 32497378 - 32497240
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| |||||||| ||||| || |||||||||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| |||||||     
T  32497378 ttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgag 32497280  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||||| |||||| ||||    
T  32497279 gatacaattttcgttagtgagagcttataaattaaaataa 32497240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 4068094 - 4068233
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||  ||||| || ||||||| || |||||||||||||   || |||||||||| |||| ||||| |||||||||||||||||||||| |||||||    
T  4068094 ttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaa 4068193  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     |||  |||||||||||| ||| |||||||||||| ||||    
T  4068194 gatactattttcgttagtgagaacttatgaattaatataa 4068233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 17628531 - 17628393
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||| ||||||||||| | || |||||||||||||||  || ||||||||||||||||||||||  ||||||||    
T  17628531 ttattttagagcttatataaaacagcttatacaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatgaa 17628433  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||| | |||||| ||||    
T  17628432 gatacaattttcgttagtgagagcttctaaattaaaataa 17628393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 35282675 - 35282562
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||  ||||| | | |||    
T  35282675 ttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaattagtgaaaactt 35282576  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  35282575 atgaattaatataa 35282562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 9572884 - 9572752
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaa 108  Q
    ||||||||| |||| || || |||||||||||||  | || || ||||||| ||||  ||||||||||||||||||||||||||||||||||| |||||     
T  9572884 gagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaag 9572785  T
Q  109 ttttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||| ||| |||||||||||| ||||    
T  9572784 tttttgttagtgagaacttatgaattaatataa 9572752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 5243510 - 5243396
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | ||  |||||||||||| || || ||||||||||||||||||||| | ||||||||    
T  5243510 ttattttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttat-aagtttttaaggtagtttatgaaaaaatagtttatgaa 5243412  T
Q  102 tataaaattttcgtta 117  Q
     ||| |||||||||||    
T  5243411 gatacaattttcgtta 5243396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13412560 - 13412426
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||||||| |||| |||||||  ||||||||||| |||||| || ||||||||||||| || || |||||||||||||||||||||| ||| ||||    
T  13412560 tttattttagagattatataaaataacttatgcaaatacataaatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaaccattcatga 13412462  T
Q  101 atataaaattttcgttagtaagatcttatgaattaa 136  Q
    | ||| || ||| |||||| ||| ||||| ||||||    
T  13412461 agatacaaattttgttagtgagagcttataaattaa 13412426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 17814170 - 17814296
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||||||||||||| || || ||||||||||||| || || |||||||||||||||||||||    |||||||    
T  17814170 ttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaatgggttatgaa 17814268  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
     ||| ||||||||||||| ||| |||||    
T  17814269 aatacaattttcgttagtcagaacttat 17814296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 141
Target Start/End: Original strand, 46263417 - 46263515
Alignment:
Q  42 aaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||||||| |||||| |||| ||||||||||| |||||| ||||    
T  46263417 aaatattaatgtattatttataaatttgttaggttaatttatgaaaaaacaacttatgaatatacaatttt-gttaataagatcttataaattaatataa 46263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 46689649 - 46689518
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| |||||||||||||||| ||   || || ||||||| || | |||||||||||| ||||| | ||||||| ||||||| |||||||    
T  46689649 gagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaaat 46689550  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||| |||||||||||| ||||    
T  46689549 tttcgttagtgagaacttatgaattaatataa 46689518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 10365159 - 10365288
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatt 110  Q
    ||||||||||||||| ||||||||||| ||||||  || |||||||||| |||| ||||| || |||||||||| ||||||||   ||||||||| ||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatg-aaaaacaaccgatgaatatacaatt 10365257  T
Q  111 ttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||| | ||| | |||||||||||    
T  10365258 ttcgttagtaaaaacttttaaattaacataa 10365288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 15515431 - 15515317
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||||| |||||||||   || |||||||||| |||| ||||| ||||||||||||||||||| |  ||||||| ||| ||||||||||||| |||     
T  15515431 agtttatgctaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaa 15515332  T
Q  125 cttatgaattaacat 139  Q
    |||||||||||||||    
T  15515331 cttatgaattaacat 15515317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 35276006 - 35275866
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatatta--atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatg 99  Q
    |||||||||||||||| ||||| || |||| ||||||||||||| ||   |||||||||||||||  || |||||||||||||||||||| |  |||| |    
T  35276006 ttattttagagcttatataaaacagcttatacaaataaataaatttttttatgtattatttataagatt-ttaaggtagtttatgaaaaacctgtttagg 35275908  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||| ||||||||||||| |||| |||| |||||| ||||    
T  35275907 aatatacaattttcgttagtgagattttataaattaaaataa 35275866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 37329493 - 37329380
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||| |   || |||||||||| |||||||||| |||||||||||||||||||||  ||||||| ||| |||||||||| || ||| |||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaactt 37329394  T
Q  128 atgaattaacataa 141  Q
    || |||||||||||    
T  37329393 ataaattaacataa 37329380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 48819304 - 48819417
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||| |   ||||||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| | |||| |||||| ||| |||    
T  48819304 ttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaactt 48819403  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  48819404 atgaattaacataa 48819417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15631882 - 15632022
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||||||||||||  |||| |  |||| ||||||||||| | || |||||||||||||||  ||||||| ||| |||||||||||||  |||||||    
T  15631882 tttattttagagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatga 15631981  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| ||||||||||||| ||| | ||| |||||| ||||    
T  15631982 aaatacaattttcgttagtgagagcatataaattaaaataa 15632022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 16225488 - 16225622
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |||||||| |||||||||| | || |||||||| |||| || ||||||||||| |||| |||||||||| |||||||    
T  16225488 ttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattat-aagttgttaaggtaatttaggaaaaaacaacttatgaa 16225586  T
Q  102 tataaaattttcgttagtaagatcttatgaattaaca 138  Q
     || | | |||||||||| ||| ||||| ||||||||    
T  16225587 gat-acagtttcgttagtgagaacttataaattaaca 16225622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 5347134 - 5347248
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||  ||||||||||||||| || || ||||||||||||| || || |||||||||||||||||||||    |||||||    
T  5347134 ttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaatgggttatgaa 5347232  T
Q  102 tataaaattttcgtta 117  Q
     ||| |||||||||||    
T  5347233 aatacaattttcgtta 5347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 13038954 - 13039065
Alignment:
Q  30 atgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttat 129  Q
    ||||||||||||||   || || ||||||| || | |||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||  ||||    
T  13038954 atgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaagttat 13039053  T
Q  130 gaattaacataa 141  Q
    ||||||| ||||    
T  13039054 gaattaatataa 13039065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 15791363 - 15791501
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || ||||||||||||| || || |||||||||||||||||||||   || |||||    
T  15791363 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttat-aagtttttaaggtagtttatgaaaaaatcgttaatgaa 15791461  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||| | ||| ||||| |||||| ||||    
T  15791462 gatacaattttcgttaatgagagcttataaattaaaataa 15791501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 25485753 - 25485844
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    |||||||||||||||||| || || | ||||| || | ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25485753 ttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaaattttcgctagt 25485844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 3069916 - 3069822
Alignment:
Q  47 ttaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |||||||  |||| ||| |||||||||||||||||    
T  3069916 ttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaattaacataa 3069822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 6337837 - 6337724
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||| ||||||||||   || |||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |||||| |||||  ||| |||    
T  6337837 ttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaactt 6337738  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  6337737 atgaattaacataa 6337724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 26435280 - 26435144
Alignment:
Q  3 tattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaat 102  Q
    |||||| ||||||||  |||| || |||||||||||||||| | ||| |||||||||| |||  |||| || |||||||||||||||||  ||||||||     
T  26435280 tatttttgagcttatacaaaacagcttatgcaaataaataagtttta-tgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaag 26435182  T
Q  103 ataaaattttcgttagtaagatcttatgaattaacata 140  Q
    ||| | ||||||||| | ||| ||||||||||||||||    
T  26435181 atacatttttcgttactgagaacttatgaattaacata 26435144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 35590109 - 35590246
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||  ||||||||||||| |  ||||||||||||||||   || ||||||  || |||| ||||| ||||| |||||||||||||||  |||||||    
T  35590109 ttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaa 35590208  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacat 139  Q
     ||| ||||||||| ||| ||| |||||||||||||||    
T  35590209 gatacaattttcgtcagtgagaacttatgaattaacat 35590246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 49971230 - 49971347
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |  |||||||||||||||    || || |||||||||||| |||||||| ||||||||||||||||||  ||| |||    
T  49971230 ttattttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaa 49971329  T
Q  102 tataaaattttcgttagt 119  Q
     ||| |||||||||||||    
T  49971330 gatacaattttcgttagt 49971347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 26988158 - 26988266
Alignment:
Q  33 caaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaa 132  Q
    |||||||||||   || |||| ||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |||| |||||||||| | ||||||||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaa 26988257  T
Q  133 ttaacataa 141  Q
    |||||||||    
T  26988258 ttaacataa 26988266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 37148200 - 37148112
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    |||||||| |||||||| |||  || ||||||||||||||||  |||||||||||||||||||   |||||||||||||||||||||||    
T  37148200 ttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 12256586 - 12256724
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |  ||||| |||||| ||    || || ||||||||||||  ||||| | |||||||||||||| ||||||||||||    
T  12256586 ttattttagagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaa 12256684  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||||||| |||||||||||| ||||    
T  12256685 ggtacaattttcgttagtaagaacttatgaattaaaataa 12256724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 15235267 - 15235129
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||| || || |||||||| ||||| |||||||||| | || ||||||||||||| || || |||||  |||||||||||||||  ||||||||    
T  15235267 ttattttagaactaatataaaatagcttatgtaaataaataagtttttatgtattatttat-aagtttttaagacagtttatgaaaaaacggtttatgaa 15235169  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     | |  |||||||||||||||| ||||| |||||| ||||    
T  15235168 gaaaccattttcgttagtaagagcttataaattaaaataa 15235129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 26946212 - 26946094
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||| ||||||||| ||||  | ||||| ||||||||||  | || |||| ||||| |||| |||||||||||||||||||||||||||| ||||||    
T  26946212 ttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatga 26946113  T
Q  101 atataaaattttcgttagt 119  Q
    | ||| ||||||| |||||    
T  26946112 agatacaattttccttagt 26946094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 45267494 - 45267584
Alignment:
Q  52 gtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||| | ||||| ||||||||||||||||||| ||  ||||||| ||| ||||||||||||||||| ||||||||| |||||||    
T  45267494 gtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaataaacataa 45267584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 22593488 - 22593375
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||||| || |||||||||| |||| ||||| || | |||||| |||||| || ||||| || ||| |||||| |||||| ||| |||    
T  22593488 ttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgagaactt 22593389  T
Q  128 atgaattaacataa 141  Q
    || |||||||||||    
T  22593388 ataaattaacataa 22593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 19220153 - 19220264
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| ||||| |||||| | |||||||||| | || ||||||||||||| |  || |||||||||||||||||||||| |||||||||    
T  19220153 ttattttaaagcttatataaaacagtttaagaaaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaaaactatttatgaa 19220251  T
Q  102 tataaaattttcg 114  Q
     ||  ||||||||    
T  19220252 gatgcaattttcg 19220264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 36423062 - 36422971
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    ||||||||||||||||   || || ||||||| ||||  |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||    
T  36423062 ttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagt 36422971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 41196769 - 41196678
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| || ||||||||||||||||||  ||||||| ||| |||||| |||||| ||| ||| |||||||||||||    
T  41196769 atgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataa 41196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 46473141 - 46473212
Alignment:
Q  70 ttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||||||||| ||||| |||||||||||| ||||    
T  46473141 ttaaggtagtatatgaaaaaacaacttatgaagataaagttttcgttaataagaacttatgaattaatataa 46473212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 16889042 - 16888934
Alignment:
Q  32 gcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatga 131  Q
    ||||||||||||   || |||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| ||||||| ||||| |||  ||||||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatga 16888944  T
Q  132 attaacataa 141  Q
     |||||||||    
T  16888943 cttaacataa 16888934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 1005345 - 1005456
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || | |||||||| |||| |||||  |||||||| |||||||||| | ||||||| ||| |||||| | |||| ||| |||    
T  1005345 ttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgagaactt 1005444  T
Q  128 atgaattaacat 139  Q
    ||||||||||||    
T  1005445 atgaattaacat 1005456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 20169251 - 20169382
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| || ||||||||||||||||   || |||||||||||||||  || | ||  ||||||||||||||||| ||||| |||||| |||    
T  20169251 gagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaat 20169350  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    || ||| | | ||| ||||  |||||||||||    
T  20169351 ttccgtcaatgagaacttaaaaattaacataa 20169382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 28122621 - 28122716
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaaga 123  Q
    |||||||||||||| |   || || ||||||| || | ||| ||||||||||||||||||||| || |||| || |||||||||||||||||||||    
T  28122621 ttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaaga 28122716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 10082255 - 10082369
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||| | || |||| ||||| ||||  |||| ||||||||||||| ||||||||| ||||||| ||| | |||| ||| || ||| ||    
T  10082255 ttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaatacatttttggttcgtgagaact 10082354  T
Q  127 tatgaattaacataa 141  Q
    |||||||||| ||||    
T  10082355 tatgaattaatataa 10082369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 22103088 - 22103215
Alignment:
Q  2 ttattttagagcttatgtaaaata--gtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatg 99  Q
    |||||||||||||||| ||||| |  | ||||| ||||||||| || || ||||||||||||| || || ||||||||||||||| |||||  | |||||    
T  22103088 ttattttagagcttatataaaacacagcttatgtaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatg-aaaaatgagttatg 22103185  T
Q  100 aatataaaattttcgttagtaagatcttat 129  Q
    || ||| ||||||||||||| ||| |||||    
T  22103186 aaaatacaattttcgttagttagaacttat 22103215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 26542952 - 26543069
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||| |||||| || ||||| |  |||||||||||||||    || ||||||||| |||||  ||||||| ||||||||||||||||||| ||| |||    
T  26542952 ttatttgagagctgatataaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaa 26543051  T
Q  102 tataaaattttcgttagt 119  Q
      || |||||||||||||    
T  26543052 agtacaattttcgttagt 26543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 50919479 - 50919603
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||| ||||||||||||||||||||||| | | ||  | ||||||||||||  |||| || ||||||||| ||||||||  ||||||| ||| |||||||    
T  50919479 ttatataaaatagtttatgcaaataaatgagttttt-tatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttc 50919577  T
Q  114 gttagtaagatcttatgaattaacat 139  Q
    |||| ||| | || || |||||||||    
T  50919578 gttaataaaaactaataaattaacat 50919603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 1683943 - 1683875
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaatta 135  Q
    |||| ||||||||||||||||||||| ||||| ||  || |||||||||||| |||| |||||||||||    
T  1683943 ttgtcaaggtagtttatgaaaaaacagtttataaaactacaattttcgttagcaagaacttatgaatta 1683875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 42591412 - 42591500
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||  ||||||||||| |||||||||||| | |||||||| ||| | ||||||||||| | | ||||| |||||| ||||    
T  42591412 tattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacacttttcgttagtgaaagcttataaattaaaataa 42591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 39941516 - 39941587
Alignment:
Q  29 tatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||||||||| ||| || |||||||||| |||| ||||| || |||||| |||||||||||| ||||||    
T  39941516 tatgcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaacaacttatga 39941587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 10850170 - 10850036
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaa-----tttatgaatat 104  Q
    ||||||||| |||||||||| |||||||||||||   || |||||||||| ||||  |||| || |||||||||| ||||| ||     |||||||| ||    
T  10850170 gagcttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaaaaaacttgtttatgaaaat 10850071  T
Q  105 aaaattttcgttagtaagatcttatgaattaacat 139  Q
    | ||||||||||| | | | ||||| |||||||||    
T  10850070 acaattttcgttaatgaaaacttataaattaacat 10850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 14461075 - 14461009
Alignment:
Q  75 gtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||| ||||| || ||| ||||||| ||||| ||| ||||| |||||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattttcattagtgagaacttataaattaacataa 14461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 36259373 - 36259283
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    |||||| |||||||||||| || ||||||||||  |||  |||| |  |||||||||||||||||| ||||| || ||| |||||||||||    
T  36259373 tttatgtaaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattttcgtta 36259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 19284879 - 19284994
Alignment:
Q  6 tttagagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaa--caatttatgaat 102  Q
    |||||||||||| ||||| || ||||  ||||||||||  ||||| ||||||||||||||  |||||||| || ||||| ||||||  || ||||||||     
T  19284879 tttagagcttatataaaacagcttatataaataaataagctatta-tgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaag 19284977  T
Q  103 ataaaattttcgttagt 119  Q
    ||| |||||||||||||    
T  19284978 atacaattttcgttagt 19284994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 39941588 - 39941665
Alignment:
Q  29 tatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataa 106  Q
    |||| |||||||| ||| ||  ||||||||  |||||||||| ||  |||||||||||||||||||||||||| ||||    
T  39941588 tatgtaaataaatgaatttttctgtattatacataaacttgtcaaattagtttatgaaaaaacaatttatgaagataa 39941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 41196632 - 41196673
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  41196632 ttatttttgagcttatgtaaaatagcttatgcaaataaataa 41196673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 5610485 - 5610596
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatatta--atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatg 99  Q
    ||||||||||| ||||| ||||||| ||||  |||||||||  | ||   ||||||||||||||| ||| |||| ||||||||| |||||| | ||||||    
T  5610485 ttattttagagtttatgcaaaatagcttataaaaataaatatttttttttatgtattatttataagctttttaatgtagtttataaaaaaatagtttatg 5610584  T
Q  100 aatataaaattt 111  Q
    ||  ||||||||    
T  5610585 aaggtaaaattt 5610596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 18327529 - 18327617
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtt 116  Q
    ||||||||||||||||   || |||||||| | |||| ||||| ||| |||||||||||||||||  ||||||| | | ||||||||||    
T  18327529 ttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatgaacacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 31378832 - 31378724
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || ||||||| | || ||||| |||||||||||||||||||   ||||| || ||| |||||| |||||||| | |||    
T  31378832 ttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttagtaaaaactt 31378733  T
Q  128 atgaattaa 136  Q
    || ||||||    
T  31378732 ataaattaa 31378724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 391229 - 391293
Alignment:
Q  75 gtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||||||||  | ||| ||| ||||||||||||  ||| |||||||||||||||||    
T  391229 gtagtttatgaaaaaacaat--acgaagatacaattttcgttagcgagaacttatgaattaacataa 391293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 22088518 - 22088432
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    ||||||||||| |||| ||||| || ||||| |||||||||| | || ||||||||||||  || || |||||||||||||| |||||    
T  22088518 ttattttagagtttatataaaacagcttatgtaaataaataagtttttatgtattattta-caagtttttaaggtagtttataaaaaa 22088432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 23544819 - 23544909
Alignment:
Q  51 tgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata-aaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |  |||||||| || ||| |||| ||||||||||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaatacattttttcgttggtgagaactta-gaattaacataa 23544909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 26988312 - 26988273
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaat 41  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  26988312 ttatttttgagcttatgaaaaatagtttatgcaaataaat 26988273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 28690031 - 28690122
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||||  |||| ||||||||||||||| |||||  ||||||| ||| ||||||  ||||| |||  || |||||||||||||    
T  28690031 atgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtgagaaattctgaattaacataa 28690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19220337 - 19220296
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  19220337 tttatttt-gagcttatgaaaaatagtttatgcaaataaataa 19220296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 41003392 - 41003454
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgt-taaggtagtttatgaaaaa 89  Q
    |||||||||||||||| | || |||||||||||||||  ||||  ||||||||||||||||||    
T  41003392 ttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaaaa 41003454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 49738324 - 49738274
Alignment:
Q  86 aaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    ||||| |||||||||| ||| ||||||||||||| ||| ||||||||||||    
T  49738324 aaaaaaaatttatgaaaatacaattttcgttagtgagaacttatgaattaa 49738274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 12828154 - 12828218
Alignment:
Q  55 ttatttataaacttgttaaggtagtttatgaaaaaacaatttat--gaatataaaattttcgtta 117  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||   || |||||||||||||||    
T  12828154 ttattcataaaatttttaaggtagtttatgaaaaaacaacttataaaaagataaaattttcgtta 12828218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 47413536 - 47413495
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  47413536 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 47413495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26435097 - 26435137
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaata 42  Q
    |||||||  |||||||| |||||||||||||||||||||||    
T  26435097 ttatttttaagcttatgaaaaatagtttatgcaaataaata 26435137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 42363581 - 42363678
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| || | || |||| |||||||||   | || ||||||||||||||| ||||||||   |||| ||||||||||| || |||||    
T  42363581 ttattttagagcttatgcaagacagcttatacaaataaatg--tctttatgtattatttataagcttgttaataaagttaatgaaaaaacagttgatgaa 42363678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 46501100 - 46500968
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    |||||||| ||||| | |||||| |||||||| |   ||  |||||||||||||| ||||| |  |||||||||||||||| |  ||||||| ||| |||    
T  46501100 gagcttatataaaacaatttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaat 46501001  T
Q  110 ttt-cgttagtaagatcttatgaattaacataa 141  Q
    ||| ||||||| | | ||||| ||| |||||||    
T  46501000 tttccgttagtgaaaacttataaatcaacataa 46500968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 47413400 - 47413460
Alignment:
Q  51 tgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattt 111  Q
    |||||||||||||| ||||| || ||||||||||||| ||||  ||||||| ||| |||||    
T  47413400 tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagatataattt 47413460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 22397386 - 22397277
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22397386 ttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatctt 22397287  T
Q  128 atgaattaac 137  Q
    ||||||||||    
T  22397286 atgaattaac 22397277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 2702822 - 2702683
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||  || ||||||| |||||||| ||||| ||||||||||||||  |||||||||||||| ||||||| |||| |||||||    
T  2702822 ttattttagagcttatgcaaagcagcttatgcacataaataagtattagtgtattatttataagtttgttaaggtagttaatgaaaagacaacttatgaa 2702723  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  2702722 tatacaattttcattagtaagatcttatgaattaacataa 2702683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 46176085 - 46175942
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || |||||||||||||||| || ||||||||||||||||||||| | ||||||||    
T  46176085 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattt-ttaaggtagtttatgaaaaaatagtttatgaa 46175987  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataagtgct 146  Q
     ||| |||||||| |||||||| ||||| |||||| |||| ||||    
T  46175986 gatacaattttcgctagtaagagcttataaattaaaataaatgct 46175942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 47202805 - 47202943
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| ||||| || |||||||||||||||| | || |||||||| ||||||| || |||||||||||||||||||||| |||||||||    
T  47202805 ttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaattt-ttaaggtagtttatgaaaaaaccatttatgaa 47202903  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||||||||| |||||| ||||    
T  47202904 gatacaattttcgttagtgagatcttataaattaaaataa 47202943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 15184526 - 15184664
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || |||||||||||||||  || |||| |||||||||||||||||| ||||||||    
T  15184526 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaagtagtttatgaaaaaacagtttatgaa 15184624  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||||| |||||| ||||    
T  15184625 gatacaattttcgttagtgagaacttataaattaaaataa 15184664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 29877618 - 29877757
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| | |||||||||||||||||   || |||||||||| |||| |||| ||||||||||||||||||| ||  |||||||    
T  29877618 ttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaa 29877717  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||| |||||| ||| |||||||||||||||||    
T  29877718 gatacaatttttgttagtgagaacttatgaattaacataa 29877757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 4603439 - 4603300
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||||| ||||||| ||||| |  |||||||||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| |||||||    
T  4603439 tttattttaaagcttatataaaacaacttatgcaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagtttatga 4603341  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| ||||||||||||| |||  |||| |||||| ||||    
T  4603340 agatacaattttcgttagtgagagtttataaattaaaataa 4603300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 26206438 - 26206322
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||||||||||||||  | || |||||||||||||||  ||||||| |||||||||||||||||| ||||||||| ||  ||||||||||||||||     
T  26206438 agtttatgcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagtaagaa 26206339  T
Q  125 cttatgaattaacataa 141  Q
    ||||| |||||| ||||    
T  26206338 cttataaattaaaataa 26206322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 18424383 - 18424246
Alignment:
Q  3 tattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaat 102  Q
    |||||| ||||||||| |||| | ||||| |||||||||||   || |||||||||| |||||||||| |||||||||||||| |||||||||||||||     
T  18424383 tatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatttatgaag 18424285  T
Q  103 ataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||| |||||| |||| | | | |||||||||||||||||    
T  18424284 atacaatttttgttattgaaaacttatgaattaacataa 18424246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 43983463 - 43983353
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| |||||||||||  ||||||||||||||||||| ||||||||| |||||||| ||||||||| |||| || ||| ||||||||||| ||| |||||    
T  43983463 ttatacaaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgttaataaaatctt 43983364  T
Q  128 atgaattaaca 138  Q
    || ||||||||    
T  43983363 ataaattaaca 43983353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 22303075 - 22303191
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||| | ||||| ||||||||||||||||||| | || |||||||||||||||| || || | ||||||||||||||||| |||||||||    
T  22303075 ttattttagagcttttataaaacagtttatgcaaataaataagtttttatgtattatttataaa-ttttttacgtagtttatgaaaaaaccatttatgaa 22303173  T
Q  102 tataaaattttcgttagt 119  Q
     ||| ||||||| |||||    
T  22303174 gatacaattttcattagt 22303191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 17222856 - 17222947
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  17222856 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataa 17222947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 19725272 - 19725411
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  |||| || |||||||| ||||||  | || |||||||||||||||  ||||||||||| |||||||||||||| | ||||||    
T  19725272 ttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaa 19725371  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||| ||||| ||| ||||| |||||| ||||    
T  19725372 gatataattttcattagtgagagcttataaattaaaataa 19725411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 39932835 - 39932752
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattt 111  Q
    |||||||||||||||||  || |||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  39932835 ttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 46704368 - 46704238
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    |||||||||||||| |  |||||||||||| |||   || || ||||||| || | |||||||||||||||||||||||||||  ||||||| |||||||    
T  46704368 gagcttatgtaaaacaacttatgcaaataa-taagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaat 46704270  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||| ||| |||||||||||| ||||    
T  46704269 tttcattagtgagaacttatgaattaatataa 46704238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 48591505 - 48591396
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||| | || || ||||||| |||  ||||| |||||||||||||||||||||  ||||||| ||| ||||||||||| | ||| |||    
T  48591505 ttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaactt 48591406  T
Q  128 atgaattaac 137  Q
    ||||||||||    
T  48591405 atgaattaac 48591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 41228933 - 41229021
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||| |||||||||||||||||||||||||||| | ||||| ||| ||||||| ||||| ||| |||||||||||| ||||    
T  41228933 tattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaattttcattagttagaacttatgaattaatataa 41229021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 43415396 - 43415256
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||| |||||| |  || ||||||||||||| | || |||||||||| ||||  ||||||| |||||||| ||||||||||||||| ||    
T  43415396 ttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaa 43415297  T
Q  102 tataaaattttcgttagt-aagatcttatgaattaacataa 141  Q
     ||| ||| || |||||| || | |||||||||||||||||    
T  43415296 gatataatatttgttagtgaaaaacttatgaattaacataa 43415256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 52700650 - 52700511
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||  | || ||| |||||||||| | || ||||||||||||||| ||||| || || ||||||||||||| | ||||||||    
T  52700650 ttattttagagcttatgcaaacaactt-atgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaa 52700552  T
Q  102 tataaaattttcgttagtaagatcttat-gaattaacataa 141  Q
     |||  |||||||||||||||| |||||  |||||||||||    
T  52700551 gatacgattttcgttagtaagaacttataaaattaacataa 52700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 18630938 - 18630863
Alignment:
Q  66 cttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||| |||||||||||| ||||    
T  18630938 cttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataa 18630863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 22117333 - 22117459
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| |  ||||||||||||||| || || ||||||||||||| || || |||||||||||||||||||||    |||||||    
T  22117333 ttattttagagcttatataaaacaacttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaatgggttatgaa 22117431  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
     ||  ||||||||||||| ||| |||||    
T  22117432 aatgcaattttcgttagtcagaacttat 22117459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 42617336 - 42617198
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  |||| || |||||||||||||||  | || | |||||||||||||  || ||||||||||||||||||||| | ||||||||    
T  42617336 ttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttt-ttaaggtagtttatgaaaaaatagtttatgaa 42617238  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     |||  |||||||||||| | | ||||| |||||| ||||    
T  42617237 gatatgattttcgttagtgaaaacttataaattaaaataa 42617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 896975 - 897088
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||||  || |||||||||| |||| ||||| || ||||||||||||||||||||||| | | |||  |||||||||||| | | |||    
T  896975 ttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaactt 897074  T
Q  128 atgaattaacataa 141  Q
    || |||||| ||||    
T  897075 ataaattaatataa 897088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 7148777 - 7148890
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || |||||||||| |||| ||||| |||||||||| ||||||||||  |||| || ||| ||||||| ||||| ||| |||    
T  7148777 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaactt 7148876  T
Q  128 atgaattaacataa 141  Q
    |||||||| |||||    
T  7148877 atgaattagcataa 7148890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 23297417 - 23297553
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||   || |||||||||| ||||  |||| |||||||||||||   |||||  |||||||    
T  23297417 ttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatg---aaacagcttatgaa 23297513  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||| |||||  ||| ||||||||||| |||||    
T  23297514 gatacaatttttgttagcgagaacttatgaattagcataa 23297553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 39931603 - 39931524
Alignment:
Q  49 aatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttat 129  Q
    ||||||||||||| || ||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||| ||| |||||    
T  39931603 aatgtattatttacaagctt-ttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgagagcttat 39931524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 213046 - 212956
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||| |||| |  |||||||||||||||| | ||| | ||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  213046 gagcttatgcaaaacaacttatgcaaataaataagttttatt-tattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaa 212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 40699343 - 40699478
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaat----ttatgaatata 105  Q
    ||||||||| |||| || |||||||||||||||||| || ||||| |    |||| ||||| ||||||||||||||||||||||     ||||||| |||    
T  40699343 gagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaaaacaaacatcttatgaagata 40699442  T
Q  106 aaattttcgttagtaagatcttatgaattaacataa 141  Q
     | ||||||| ||| ||| |||||||||||||||||    
T  40699443 cagttttcgtaagtgagaacttatgaattaacataa 40699478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 2141646 - 2141747
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || |||| ||||||||||  |||||||||||  |||| |||||||| |||||||| ||| ||||||| ||||||||| |||    
T  2141646 ttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattttcattagtaagagctt 2141745  T
Q  128 at 129  Q
    ||    
T  2141746 at 2141747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 2548128 - 2548015
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||| | || || | ||||| || | | | ||||| |||||||||||||||||||||||||| |||||||||||| || | ||| |||    
T  2548128 ttatgcaaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaactt 2548029  T
Q  128 atgaattaacataa 141  Q
    || |||||| ||||    
T  2548028 ataaattaatataa 2548015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 7206627 - 7206566
Alignment:
Q  68 tgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttat 129  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||| |||||    
T  7206627 tgttaaggtagtttatgaaaaaacaacttatgaagataaagttttcgttagtgagaacttat 7206566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 23335647 - 23335760
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||| |   || |||||||||| |||| | | | |||||||||||||||||||||  ||||||| ||| ||||||| | ||| ||| |||    
T  23335647 ttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgagaactt 23335746  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  23335747 atgaattaacataa 23335760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 35124366 - 35124483
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || ||||||||||| ||||   || ||||| |||| |||| ||||| |||||||||||||||||||||  |||||||    
T  35124366 ttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaa 35124465  T
Q  102 tataaaattttcgttagt 119  Q
     ||| || ||| ||||||    
T  35124466 gatacaaattttgttagt 35124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 52274201 - 52274100
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||||  || |||||||||| |||| ||| | ||||||||||| |||||||||  ||||||| ||| ||||||||| ||| ||| |||    
T  52274201 ttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgagaactt 52274102  T
Q  128 at 129  Q
    ||    
T  52274101 at 52274100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 2494507 - 2494408
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||| ||||| |||||| ||||||||||||| ||||| ||||   || |  |||||||||||| ||||| ||||||||||||||||||| | ||||||||    
T  2494507 ttatattagatcttatgcaaaatagtttatgtaaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaa 2494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 10795016 - 10794929
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    ||||||||||||||||| |||| || || || |||||||||| | || |||||||||||| || || |||||||| ||||||||||||    
T  10795016 ttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatttaaaagctcgttaaggtggtttatgaaaaa 10794929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 15179809 - 15179923
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||| ||||| || ||||||||||||||| || || ||||||||||||| || || ||||||||||||||||| |||    ||||||| ||| |||||||    
T  15179809 ttatataaaacagcttatgcaaataaatatatttttatgtattatttat-aagtttttaaggtagtttatgaagaaatggattatgaaaatacaattttc 15179907  T
Q  114 gttagtaagatcttat 129  Q
    |||||| ||| |||||    
T  15179908 gttagtcagaacttat 15179923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 38345920 - 38345790
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| || |||| |||||||||||   || ||||| |||| ||||  |||| || ||||||||||||||||||| ||||||| ||| |||    
T  38345920 gagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaat 38345822  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||  ||||  ||| |||||||||||||||||    
T  38345821 ttttattagccagaacttatgaattaacataa 38345790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 12495753 - 12495612
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaa--ggtagtttatgaaaaaacaatttatg 99  Q
    |||||||| |||||| | |||| || ||||||||||||||||   || |||||||||| |||| ||||| ||  |||||||||||||||||||  | ||     
T  12495753 ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatc 12495654  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || ||| ||| ||| ||||| ||| ||||| |||||||||||    
T  12495653 aagatacaatattcattagtgagaacttataaattaacataa 12495612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 28074370 - 28074459
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttag 118  Q
    ||||||||||||||||   || |||||||||| |||| ||||| ||||||||||||||||||| |  ||||||| ||| ||||||||||||    
T  28074370 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttag 28074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 948060 - 948188
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaat 109  Q
    |||||||| ||||||| ||||| ||||||||||   || |||||||||| ||||  |||| ||||||||||||| ||||||||  |||| || ||| |||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaat 948159  T
Q  110 tttcgttagtaagatcttatgaattaaca 138  Q
    ||| || ||  ||| ||||||||||||||    
T  948160 ttttgtcagagagaacttatgaattaaca 948188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 11679233 - 11679095
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaactt-gttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||||||||| | ||||| ||||||||| ||| ||   ||||||||||||| ||| ||| | |||||||||| |||| ||| ||||||    
T  11679233 ttatttta-agcttatgtaaaacaatttatacaaataaatgaattttttggtattatttataagctttgttgatgtagtttatggaaaa-caaattatga 11679136  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| ||||||||||||| | |  |||| |||||||||||    
T  11679135 agatacaattttcgttagttaaaatttataaattaacataa 11679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 11687512 - 11687374
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaactt-gttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||||||||| | ||||| ||||||||| ||| ||   ||||||||||||| ||| ||| | |||||||||| |||| ||| ||||||    
T  11687512 ttatttta-agcttatgtaaaacaatttatacaaataaatgaattttttggtattatttataagctttgttgatgtagtttatggaaaa-caaattatga 11687415  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| ||||||||||||| | |  |||| |||||||||||    
T  11687414 agatacaattttcgttagttaaaatttataaattaacataa 11687374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 22273830 - 22273898
Alignment:
Q  73 aggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||||||||  ||||||| ||| |||||| |||||| |||  ||||||||||||||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaagttatgaattaacataa 22273898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 42611975 - 42611837
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatatta-atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||  |||||||| |||| |  ||||||||||||||||   ||| |||||||||| |||| |||||  || |||||||||||||||||| ||||||    
T  42611975 ttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatga 42611877  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| | |||||| |||| | | |||||||||||||||||    
T  42611876 agatacagttttcg-tagtgacaacttatgaattaacataa 42611837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 55638165 - 55638049
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    |||||||||||||||| ||   || |||||||||| ||||  |||| ||  ||||||||||||||||| ||||| || ||| ||| | ||||||| |||     
T  55638165 agtttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgagaa 55638066  T
Q  125 cttatgaattaacataa 141  Q
    ||||| |||||||||||    
T  55638065 cttataaattaacataa 55638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55802285 - 55802241
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaat 45  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  55802285 tttattttagagcttatataaaacagtttatgcaaataaataaat 55802241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 9201630 - 9201768
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| |||| |||||||  |||||||||||||||| | || ||||||||||||| || || | ||| || |||||| |||||||  |||||||    
T  9201630 ttattttagagtttatataaaataacttatgcaaataaataagtttttatgtattatttat-aagttttcaagctattttatggaaaaacaggttatgaa 9201728  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||   |||||||||||  ||| ||||| |||||| ||||    
T  9201729 gatgtgattttcgttagcgagagcttataaattaaaataa 9201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 35010222 - 35010329
Alignment:
Q  34 aaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaat 133  Q
    |||||||||| | || |||||||||||||||  |||| || ||||||||||| |||| | ||||| || ||| || |||||||||||| |  |||| |||    
T  35010222 aaataaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgttagtaaaaatttataaat 35010321  T
Q  134 taacataa 141  Q
    ||||||||    
T  35010322 taacataa 35010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 35405664 - 35405801
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| |  |||| ||||||| |||  ||| |||||||||   ||| ||||| |||  ||||||||||||||||  |||||||    
T  35405664 ttatttttgagcttatgcaaaacaacttatacaaataactaag-atttatgtattatacttaatcttgtcaagacagtttatgaaaaaacagcttatgaa 35405762  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||||| | ||| |||||||||||    
T  35405763 gatagaattttcgttagtaaga-cctattaattaacataa 35405801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 10046260 - 10046350
Alignment:
Q  51 tgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| ||||||||||| || ||||||||| ||||||||  ||||||| ||| ||||||||||| | | | | ||| |||||||||||    
T  10046260 tgtattatctataaacttgtcaatgtagtttataaaaaaacaggttatgaaaatacaattttcgttattgaaaacatataaattaacataa 10046350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 36255094 - 36255004
Alignment:
Q  51 tgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||| || |||| ||||| || ||||||| ||||||||||  ||||||| ||| ||||||  ||||| ||| |||||||||||||||||    
T  36255094 tgtattgttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaacttatgaattaacataa 36255004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 36740909 - 36741019
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || ||||||  |||| ||||| || |||||||||||||| ||| || ||||| ||| ||||||| ||||| ||| |||    
T  36740909 ttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaactt 36741008  T
Q  128 atgaattaaca 138  Q
    |||||| ||||    
T  36741009 atgaatcaaca 36741019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 488465 - 488352
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||| |||   || |||||||||| |||| ||||| |||||||||||||||||||    || | || ||| ||||||  ||||| ||| |||    
T  488465 ttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgagaactt 488366  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  488365 atgaattaacataa 488352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 19414108 - 19414169
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttata 63  Q
    ||||||||||||||||  |||| || |||||||||||||||| | || ||||||||||||||    
T  19414108 ttattttagagcttatagaaaacagcttatgcaaataaataagtttttatgtattatttata 19414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 28663606 - 28663690
Alignment:
Q  56 tatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||| ||||| |||||||||||||||||||||  || |||| ||| ||||||||||| | ||| |||||||| ||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtta-tgagaacttatgaactaacataa 28663690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 33533977 - 33534046
Alignment:
Q  72 aaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||    | ||||||| ||||||||||||| ||| |||||||| ||||||||    
T  33533977 aaggtagtttatgaaaaaacagcccacgaatatacaattttcgttagtgagaacttatgaactaacataa 33534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 54412128 - 54412063
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaa 93  Q
    |||||||||||||||||| || |||||||||||||| | |||| |  |||||||||| ||||||||    
T  54412128 ttatgcaaataaataaatttttatgtattatttatatatttgtcagtgtagtttatgcaaaaacaa 54412063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 3564202 - 3564286
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    |||| ||||||||| |||| || ||||| |||||||||||  || || ||||||| ||||  |||| ||||||||||||||||||    
T  3564202 tttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaaa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 4398294 - 4398198
Alignment:
Q  21 aaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    ||||| ||||||||||||||| ||  ||  | ||||||||||||| || |||| ||||||||||||||||    ||||||| ||| |||||||||||    
T  4398294 aaataatttatgcaaataaatgaactttcttctattatttataaattttttaatgtagtttatgaaaaaattggttatgaagatataattttcgtta 4398198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 7396354 - 7396398
Alignment:
Q  97 atgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||| |||||||||||| || |||||||||||||||||||    
T  7396354 atgaatatacaattttcgttagaaaaatcttatgaattaacataa 7396398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 23284856 - 23284789
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    |||| ||||||||||||| ||| ||||||||||||||  ||||||||||| |||||||| | |||||||    
T  23284856 ttatacaaataaataaatttta-tgtattatttataagtttgttaaggtattttatgaagatacaattt 23284789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 46650275 - 46650367
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    |||||||||||||||||   || |||||||||| ||||| |||| |  |||||||||||||||| | ||||| || | | |||||||||||||    
T  46650275 tttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagt 46650367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 55802181 - 55802137
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaat 45  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  55802181 tttattttagagcttatataaaacagtttatgaaaataaataaat 55802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 10796365 - 10796452
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    ||||||||||||||||| |||| |  || || |||||||||| | || |||||||||||| || || |||||| | ||||||||||||    
T  10796365 ttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatttaaaagctcgttaagatggtttatgaaaaa 10796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 36298363 - 36298450
Alignment:
Q  55 ttatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||  |||||||  ||||||||| ||||||||||||||||| ||||| |||| |||| | | | |||||||||||| ||||    
T  36298363 ttatttataactttgttaaaatagtttatggaaaaaacaatttatgaagataaattttttgttaatgaaaacttatgaattaatataa 36298450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 1374470 - 1374356
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatga 100  Q
    ||||||| ||||||||| |||| |  ||||||||||||| || | || ||| || ||| |||| ||||| | ||||||||||||||||| ||  ||||||    
T  1374470 ttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaaccagcttatga 1374371  T
Q  101 atataaaattttcgt 115  Q
    | ||| |||||||||    
T  1374370 agatacaattttcgt 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 3966709 - 3966763
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtatt 56  Q
    ||||||||| |||||| |||||| | |||||||||||||||||| || |||||||    
T  3966709 ttattttagggcttatataaaatggcttatgcaaataaataaatttttatgtatt 3966763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7673431 - 7673473
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    |||||||||||||||||  |||| |||||||||||||||||||    
T  7673431 tttattttagagcttataaaaaacagtttatgcaaataaataa 7673473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23297600 - 23297558
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||    
T  23297600 tttatttttgagcttatgaaaaatagcttatgcaaataaataa 23297558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 43213688 - 43213638
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataa 64  Q
    |||| ||||||||||||| ||||||||||| | || |||||||||||||||    
T  43213688 ttatataaaatagtttatacaaataaataattttttatgtattatttataa 43213638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 43699590 - 43699500
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaaca 92  Q
    ||||||| ||||||||| |||| |  |||| |||||||||||   || |||| ||||| |||| ||||| || ||||||||||||||||||    
T  43699590 ttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaaca 43699500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 3564370 - 3564329
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  3564370 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 3564329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 24031063 - 24031148
Alignment:
Q  18 gtaaaatagtttatgcaaataaataaatattaatgtattattt-ataaacttgttaaggtagtttatgaaaaaacaatttatgaat 102  Q
    ||||||||||| |||||| ||||||||| || |||| |||||| | ||  |||||||| || ||||||||||||||| ||| ||||    
T  24031063 gtaaaatagttaatgcaattaaataaatttttatgtgttatttcaaaagtttgttaagataatttatgaaaaaacaacttacgaat 24031148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 34526267 - 34526300
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||||| ||||||||||||||||||||||||    
T  34526267 gagcttatgaaaaatagtttatgcaaataaataa 34526300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 42153084 - 42153125
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||    
T  42153084 ttatttttgagcttacgtaaaatagcttatgcaaataaataa 42153125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 48591346 - 48591387
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  48591346 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 48591387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 19298215 - 19298179
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataa 64  Q
    |||||||||||||||||| || |||||||||||||||    
T  19298215 ttatgcaaataaataaatttttatgtattatttataa 19298179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 12238564 - 12238449
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||   ||||||| ||| |||||||||||||||||||||    
T  12238564 ttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaac---ttatgaacatacaattttcgttagtaagatctt 12238468  T
Q  128 atgaattaacataagtgct 146  Q
    |||||||||||||| ||||    
T  12238467 atgaattaacataaatgct 12238449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 24438998 - 24439142
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||  |   |||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||    
T  24438998 ttattttagagcttatgcaaagcaacatatgcaaatatataaacattaatgtattatttataatcttgttacggtagtttatgaaaaaacaacttataaa 24439097  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataagtgct 146  Q
     ||| |||||| |||| ||||||||||| |||||| |||| ||||    
T  24439098 catacaatttttgttaataagatcttataaattaagataaatgct 24439142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 32366129 - 32366255
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||  |||||||||||||||| | || |||||||||||||||  || | ||||||||||||||||||||| ||||||||    
T  32366129 ttattttagagcttatataaaataacttatgcaaataaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatgaa 32366227  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
    ||||  |||||||||||||||| |||||    
T  32366228 tatacgattttcgttagtaagagcttat 32366255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32522153 - 32522019
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||||||||||||| ||||| || ||||| |||||||||| | || |||||||||||||||  || ||||||||||||||||||||||| || ||||    
T  32522153 tttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatga 32522055  T
Q  101 atataaaattttcgttagtaagatcttatgaattaa 136  Q
    | ||| ||||||||||||||||| ||||| ||||||    
T  32522054 agatacaattttcgttagtaagagcttataaattaa 32522019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 21788462 - 21788575
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || ||||||| |||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||| |||    
T  21788462 ttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgttagtgagagctt 21788561  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  21788562 atgaattaatataa 21788575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 27881104 - 27880965
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| ||||||| |||||||||||||||  |  | |||||||||||||||  || ||||||||| ||||||||||||||||||||||    
T  27881104 ttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatgaa 27881005  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || | ||||||||| | | | |||||||||||| ||||    
T  27881004 agtatacttttcgttaatgaaaacttatgaattaagataa 27880965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 22898463 - 22898347
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||  ||||||||||||||| || || |||||||||||||||| || |||||||||||||||||||||    |||||||    
T  22898463 ttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataaa-tttttaaggtagtttatgaaaaaatgggttatgaa 22898365  T
Q  102 tataaaattttcgttagt 119  Q
     ||| |||||||||||||    
T  22898364 aatacaattttcgttagt 22898347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 16108178 - 16108090
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||| |||| | | |||||||||||||||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttaattaaatcttatgaattaacataa 16108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 4026905 - 4027043
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| ||||  | ||||||||||||||||   || |||||||||  |||| ||||| |||||||||||||||||||||  |||||||    
T  4026905 ttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattatc-ataagcttgtcaaggtagtttatgaaaaaacagcttatgaa 4027003  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| |||||| |||||| ||| |||||||||||||||||    
T  4027004 gatacaatttttgttagtgagaacttatgaattaacataa 4027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 4090468 - 4090604
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || |||||||||||||||||  || |||||||||| |||| ||||| ||||||||  |||||||||||  ||| |||    
T  4090468 ttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaa 4090567  T
Q  102 tataaaattttcgttagtaagatcttatgaattaaca 138  Q
     ||| |||||||||||   ||| ||||||||||||||    
T  4090568 gatacaattttcgttaccgagaacttatgaattaaca 4090604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 36501574 - 36501483
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| |||||||||||||||||||||  ||||||| ||||||||| ||||||| ||| || ||||||||||||||    
T  36501574 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataa 36501483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 38471898 - 38471759
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || |||||||||||||||    || |||| |||| ||||| ||| || | |||||||||||||||||| ||||||||    
T  38471898 ttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaa 38471799  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||| ||| |||||||||||| ||||    
T  38471798 ggtacaattttcgttagtgagaacttatgaattaagataa 38471759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 38216002 - 38216137
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || |||||||||||||||| |||    |||||||| |||| ||||| ||||||||||| ||||||| |   ||||||    
T  38216002 ttatttttgagcttatgcaaaacagcttatgcaaataaataattat----gtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaa 38216097  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| ||||||| |||||||||    
T  38216098 gatacaattttcgttagtgagaacttatgagttaacataa 38216137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 29774750 - 29774859
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||||  || ||| |||||| || |  |||||||||||||||||||||||||   ||||||| ||| ||||||||||||| ||| |||    
T  29774750 ttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaactt 29774849  T
Q  128 atgaattaac 137  Q
    ||||||||||    
T  29774850 atgaattaac 29774859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 735990 - 736082
Alignment:
Q  49 aatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||| ||| |||||| |||| | ||| ||||| |||||||||||    
T  735990 aatgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgttattgagaacttataaattaacataa 736082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 42064881 - 42064969
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||| |||||||||||||||||| |||||| || ||||||| |||  |||||||||||||||| |||||||||||| ||||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataa 42064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 43787892 - 43787800
Alignment:
Q  20 aaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    |||| ||||||| ||||||||||||  || |||||||||| ||||||||||| |||||| |||||||||||||| ||||||| ||| ||||||    
T  43787892 aaaacagtttatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaatttt 43787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 2401728 - 2401602
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||||||||||||| || || ||||||| ||||| || || |||||||||||||||||||||    |||||||    
T  2401728 ttattttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttat-aagtttttaaggtagtttatgaaaaaatgggttatgaa 2401630  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
     ||| |||||| |||||| ||| |||||    
T  2401629 aatacaatttttgttagtcagaacttat 2401602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 11776963 - 11777102
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| |||  |||||||| || ||||||| ||||||||   || ||||||||||||||| ||||||||| ||||||||||||| |||  |||||||    
T  11776963 ttattttaaagcgcatgtaaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaa 11777062  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| | |||| |||||| ||| ||||| || ||||||||    
T  11777063 gatacactttttgttagtgagaacttataaactaacataa 11777102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 12950138 - 12950083
Alignment:
Q  86 aaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  12950138 aaaaacaacttatgaatatagaattttcgttagtaagatcttatgaattaacataa 12950083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 15155792 - 15155931
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||  |||||||||||| |  ||||| |||||||||    || ||||||||||||||| |||||||| | ||||||||||||||||||||| |||    
T  15155792 ttattttaaggcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaa 15155891  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||| ||||| | ||| |||||||||||| ||||    
T  15155892 ggtacaatttccgttaatgagaacttatgaattaagataa 15155931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 33321411 - 33321280
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| |  || |||||||||||||   || |||| ||||| |||| ||||| |||||||||||||||||||||  ||||||| ||| |||    
T  33321411 gagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 33321312  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    ||| |||||| ||| ||| |||||||||||||    
T  33321311 ttttgttagtgagagcttgtgaattaacataa 33321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 35515587 - 35515503
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    |||||||||||||||||||||| |||||| | |||||||||  | || |||||||||||||||  ||||||| ||||||||||||    
T  35515587 ttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttatgaa 35515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 43796935 - 43797003
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    ||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||| | |||||||    
T  43796935 ttatgtaaataaataagtattaatgtattatttataagtttgttaaggtagtttatgaatatacaattt 43797003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 4004824 - 4004931
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || ||||| |||| |||| ||| |||| |||||||||||||| |||| |||||||  || ||||||||||||| ||| |||    
T  4004824 ttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaactt 4004923  T
Q  128 atgaatta 135  Q
    ||||||||    
T  4004924 atgaatta 4004931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 22422275 - 22422137
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| |||| | ||| ||||||||||||||||||| | || || |||||||||| || || ||||||||||||||||||||||| ||| | ||    
T  22422275 ttattttagagtttatatgaaagagtttatgcaaataaataagtttttatatattatttat-aagtttttaaggtagtttatgaaaaaacagtttttcaa 22422177  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||   ||||| |||||| ||| ||||| |||||| ||||    
T  22422176 gatgcgatttttgttagtgagagcttataaattaaaataa 22422137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 2757176 - 2757088
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaaca 92  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||| || || |||| ||||||||||||||||||    
T  2757176 ttattttagagcttatataaaacagcttatgcaaataaataagt-tttatgtattatttat-aagtttttaaagtagtttatgaaaaaaca 2757088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 638270 - 638197
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttat 83  Q
    |||||||||||||||||||||||||||||||||||| || ||||||| || ||||| || | || |||||||||    
T  638270 gagcttatgtaaaatagtttatgcaaataaataaatttttatgtattgttcataaatttttaaatgtagtttat 638197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 887417 - 887530
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   ||  ||||||||| |||| ||||| ||||||||||||| |||| |   ||||||| ||| ||||||| |||| |||| |||    
T  887417 ttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcattagcaagaactt 887516  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  887517 atgaattaacataa 887530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 10574268 - 10574129
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatga 100  Q
    ||||||||||| |||| ||||| || ||||||||||| |||| | || || |||||||||| || || ||||||||||||||| ||||||| ||||||||    
T  10574268 ttattttagagtttatataaaacagcttatgcaaatacataagtttttatctattatttat-aagtttttaaggtagtttatgaaaaaaaccatttatga 10574170  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| || |||||| ||  ||| ||||| |||||| ||||    
T  10574169 agatacaaatttcgtcagcgagagcttataaattaaaataa 10574129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 34913489 - 34913401
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    ||||||||| |||| || ||||||||||||||||   || |||||||||| ||||  |||||||| |||||||||||||||||| ||||    
T  34913489 gagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttat 34913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 40301331 - 40301414
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||||||||||||  |||| || |||||||||||||||| | || ||||||||||||| || || |||||||||||||||||    
T  40301331 ttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttat-aagtttttaaggtagtttatgaa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 24007784 - 24007870
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||| |||||||||||   |||||||||||| || |||||||||||  ||  ||||||||||||||| ||||||||||| ||||||    
T  24007784 ttatgcaaaatagtttagataaataaataaatttttatgtattatttgaaagtttgttaaggtagtttgtgaaaaaacaacttatga 24007870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 12683687 - 12683574
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||| | ||||||||||||| |||| ||||| |  | | |||| |||||||||  ||||||| ||| |||||| |||| | ||| |||    
T  12683687 ttatgcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggttactgagaactt 12683588  T
Q  128 atgaattaacataa 141  Q
    |||||| |||||||    
T  12683587 atgaataaacataa 12683574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 17546473 - 17546542
Alignment:
Q  72 aaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| | | ||||| || ||||||||    
T  17546473 aaggtagtttatgaaaaaacaacttatgaatatatcattttcgttagtgaaaacttataaactaacataa 17546542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 25836793 - 25836688
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||||    || |||||||||| |||| ||||| ||||||||||||||||||||   ||||||| | | |||| |||||||| ||| |||    
T  25836793 ttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaactt 25836694  T
Q  128 atgaat 133  Q
    ||||||    
T  25836693 atgaat 25836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 8441456 - 8441536
Alignment:
Q  6 tttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||||||||| |||  || |||||||||||||||  | || |||||||||||||||  ||||||| ||||||||||||    
T  8441456 tttagagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29133774 - 29133659
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||   || |||||||||| ||||  |||| |  || |||| || ||||||| ||||| |    
T  29133774 tttatttt-gagcttatataaaatagtttatgcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataa 29133676  T
Q  101 atataaaattttcgtta 117  Q
    | ||| |||||||||||    
T  29133675 agatacaattttcgtta 29133659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 1836980 - 1837094
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| |||||||| ||||||| ||| |||||||||||| |||| |  ||||||| ||||| |||| || |||| ||||| ||||| |||| |||||    
T  1836980 ttatttta-agcttatgaaaaatagcttaagcaaataaataagtatttacatattattcataaatttgtaaatgtagcttatgcaaaaataattcatgaa 1837078  T
Q  102 tataaaattttcgtta 117  Q
     |||  ||||||||||    
T  1837079 gatattattttcgtta 1837094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 2790178 - 2790068
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||| ||||||||| |||| || |||||||||||||||||   || ||| |||||| |||| ||||| |||||| |||||||| |||||  ||||||    
T  2790178 ttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatga 2790079  T
Q  101 atataaaattt 111  Q
    | ||| |||||    
T  2790078 agatacaattt 2790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 5903512 - 5903634
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||| ||| |||| |  ||||||||||||| ||  |||| ||||||| | |||| ||||| || |||||| |||||||||||  |||||||    
T  5903512 ttatttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttatgaa 5903611  T
Q  102 tataaaattttcgttagtaagat 124  Q
     ||| |||||| |||||| ||||    
T  5903612 gatacaatttttgttagtgagat 5903634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 7480940 - 7480867
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||||||||| ||||||||| ||| ||| ||| ||||||| ||||| ||| |||||||||||||||||    
T  7480940 ttgtgaaggtagtttat-aaaaaacaacttaggaagatacaattttcattagtcagaacttatgaattaacataa 7480867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 12223879 - 12223957
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctta 128  Q
    |||||||||| |||| | ||| ||||||||||||||||||||| |||||||| |||  |||||| ||||| ||| ||||    
T  12223879 atgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgagaactta 12223957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 33321234 - 33321276
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaa 44  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  33321234 ttatttttgagcttatgtaaaatagcttatgcaaataaataaa 33321276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 33321510 - 33321420
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaaca 92  Q
    |||||||  |||||||| |||| |  |||||||||||| ||| | || |||||||| | |||| ||||| |||||||||||||||||||||    
T  33321510 ttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaaca 33321420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 39070843 - 39070929
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacat 139  Q
    |||||||||||| ||| ||||| ||||||||||||||| |  |||| || ||| |||||| |||||| | | |||||||||||||||    
T  39070843 tattatttataagctttttaagatagtttatgaaaaaatatcttataaaaatataatttttgttagtgaaaacttatgaattaacat 39070929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 8343083 - 8342991
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttag 118  Q
    |||||||||||||| |||  | || |||||||||| |||| ||||| || ||| |||||| ||||| |||||||||| ||| ||||||||||||    
T  8343083 agtttatgcaaatacatatttttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgttag 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 12266987 - 12267116
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaat-gtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    |||| |||||||||||| |||||||||| | | ||  | ||||||||||||| |||||  | |||||||||||||||| |  ||||||| ||| ||||||    
T  12266987 ttatataaaatagtttaagcaaataaatgatttttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttt 12267086  T
Q  113 cgttagtaagatcttatgaattaacataag 142  Q
      ||||| | | ||||| ||||||||||||    
T  12267087 tattagtgaaaacttataaattaacataag 12267116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 27931481 - 27931530
Alignment:
Q  49 aatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    ||||||||||||||||||||||||| | | ||||||||||||||| ||||    
T  27931481 aatgtattatttataaacttgttaatgaaatttatgaaaaaacaacttat 27931530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 755846 - 755714
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa-aaaacaatttatgaata 103  Q
    |||| ||||||||| |||| |  ||| |||||||| |||   || |||||||||| | || ||||||| ||||||||||||| ||||||  ||||||| |    
T  755846 tttttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaaga 755747  T
Q  104 taaaattttcgttagtaagatcttatgaattaa 136  Q
    || |||||| |||||| ||| || |||||||||    
T  755746 tacaatttttgttagtgagaactaatgaattaa 755714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 19683556 - 19683690
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatat 104  Q
    |||||||||||| ||||||||  ||||| |||||||| | | || ||||||||| ||| || ||  ||| |||||||||| ||||||  |||||||| ||    
T  19683556 ttttagagcttacgtaaaataacttatgtaaataaatgagtttttatgtattatatat-aagtttataaagtagtttatg-aaaaaccgtttatgaagat 19683653  T
Q  105 aaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | |||||| |||||||| | ||||| |||||| ||||    
T  19683654 acaatttttgttagtaaaaacttataaattaaaataa 19683690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 13056408 - 13056297
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||| ||||   || ||||||| || |||| ||||| |||||||||||| |||||| |  ||||||| ||  |||||||||||   ||| |||    
T  13056408 ttatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgttaacgagaactt 13056309  T
Q  128 atgaattaacat 139  Q
    ||||||||||||    
T  13056308 atgaattaacat 13056297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 16108570 - 16108511
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattattta 61  Q
    ||||||||||| |||||||||  |  ||||||||||||||||  ||||||||||||||||    
T  16108570 ttattttagagtttatgtaaagcaacttatgcaaataaataagcattaatgtattattta 16108511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 41554661 - 41554602
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaa 87  Q
    |||| ||||||||||||  || |||||||||| ||||| ||||||| |||||||||||||    
T  41554661 ttatacaaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 43796986 - 43797033
Alignment:
Q  94 tttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  43796986 tttatgaatatacaattttcgtcaagaagatcttatgaattaacataa 43797033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 23956298 - 23956232
Alignment:
Q  75 gtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||||||| ||||| || ||| ||||||||||| | ||| ||||| |||||||||||    
T  23956298 gtagtttatggaaaaacagtttataaagatacaattttcgttaatgagaacttataaattaacataa 23956232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 136
Target Start/End: Complemental strand, 30382324 - 30382242
Alignment:
Q  54 attatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    ||||||||||||  | ||||||| ||||| |||| ||||||||| ||| ||| ||||||||||||| | | ||||| ||||||    
T  30382324 attatttataaaacttttaaggttgtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaa 30382242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 37409695 - 37409737
Alignment:
Q  75 gtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||    
T  37409695 gtagtttatgaaaaaacaatttatgaaaatacaatttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 4533486 - 4533445
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  4533486 ttatttttgagcttatgaaaaatagcttatgcaaataaataa 4533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 5516102 - 5516191
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatgaatataaaattttcgttagtaagatcttatgaattaaca 138  Q
    |||| ||||| ||||  |||| || |||||||||||||||| || ||||| || ||| ||||||||||||| ||| ||||| ||||||||    
T  5516102 atgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaattttcgttagtgagagcttataaattaaca 5516191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 8832506 - 8832575
Alignment:
Q  72 aaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||||| |||  |||  || ||| ||||||||||||| | | |||||||||||||||||    
T  8832506 aaggtagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataa 8832575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 9270211 - 9270124
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    |||||||||| || |||| || || ||||||||||||| ||||||| ||||||||| |||||||| ||| |||| ||| |||||| ||||    
T  9270211 ttatgcaaattaa-aaatgttcatatattatttataaatttgttaatgtagtttat-aaaaaacagtttctgaaaatacaatttttgtta 9270124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 17531945 - 17532013
Alignment:
Q  19 taaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaa 88  Q
    ||||| || |||||||||||||||| | || ||||||||| ||| || || |||||||||||||||||||    
T  17531945 taaaacagcttatgcaaataaataagtttttatgtattatctat-aagtttttaaggtagtttatgaaaa 17532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 17797289 - 17797207
Alignment:
Q  54 attatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaaca 138  Q
    |||||||||||  |||||||||| |||||||||||||||  ||||||| ||| |||||| ||| || |||  |||| ||||||||    
T  17797289 attatttataagtttgttaaggtcgtttatgaaaaaaca--ttatgaaaatacaatttttgttggtgagaatttataaattaaca 17797207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 26440071 - 26440131
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttata 63  Q
    |||||||| ||||||| ||||| ||||||||||||||||||| | || || |||||||||||    
T  26440071 ttattttaaagcttatataaaa-agtttatgcaaataaataagtttttatatattatttata 26440131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 13839880 - 13839779
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    ||||| |||| |||||||||||| || ||||| ||  | ||||||||||||  || || | ||||||||||||||||| | ||||||| ||| ||||||     
T  13839880 ttatgcaaaacagtttatgcaaaaaattaaatttt--tctattatttataagtttattgatgtagtttatgaaaaaactagttatgaagatataattttt 13839783  T
Q  114 gtta 117  Q
    ||||    
T  13839782 gtta 13839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 35809069 - 35809208
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  |||  |  ||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |||    
T  35809069 ttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaa 35809168  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||||||  |||||||| ||||||||||||||||    
T  35809169 tatacaattttcgccagtaagattttatgaattaacataa 35809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 22032741 - 22032880
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||||||||| |  |||||||||||||||  | || ||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  22032741 ttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaa 22032840  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||| ||| ||||| |||||| ||||    
T  22032841 ggtacaattttcgttagtgagaacttataaattaagataa 22032880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 22575565 - 22575704
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||||||||| |  |||||||||||||||  | || |||||||||||||||  |||||||| || |||||||||||||| ||||||||    
T  22575565 ttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaa 22575664  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||||| ||||| |||||| ||||    
T  22575665 gatacaattttcgttagtaagagcttataaattaaaataa 22575704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 22319398 - 22319262
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| ||||| |||   ||||||||||||||||||| |||||||||||||| ||||  |||||||  |||||||||||| ||||| |||||||    
T  22319398 ttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttatgaaacaacaacttatgaa 22319299  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacat 139  Q
    |||| |||||||||||||||||| |||| |||||||||    
T  22319298 tatacaattttcgttagtaagatattat-aattaacat 22319262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 16933036 - 16932898
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| |||||||| |||||||  |||||||| ||||||||| || |||||||||||||||  || |||||||||||||||||||||| |||||||||    
T  16933036 ttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaa 16932938  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  16932937 gatacaattttcgttagtaaaagcttataaattaaaataa 16932898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 16938419 - 16938281
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| |||||||| |||||||  |||||||| ||||||||| || |||||||||||||||  || |||||||||||||||||||||| |||||||||    
T  16938419 ttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaa 16938321  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  16938320 gatacaattttcgttagtaaaagcttataaattaaaataa 16938281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 16958795 - 16958933
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| |||||||| ||||| |  |||||||| ||||||||| || |||||||||||||||  || ||||||||||||||||||||||  ||||||||    
T  16958795 ttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatgaa 16958893  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||||| | ||||| |||||| ||||    
T  16958894 gatacaattttcgttagtaaaagcttataaattaaaataa 16958933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 19913924 - 19914043
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||  ||||| |||||||||||| || ||||  |||||||||| ||||||| |||||||||||||||||  ||||||||    
T  19913924 ttattttagagcttatataaaataacttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaaacggtttatgaa 19914023  T
Q  102 tataaaattttcgttagtaa 121  Q
     | | |||||||||||||||    
T  19914024 gagataattttcgttagtaa 19914043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 28004563 - 28004701
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||||| | || |||||||||||||||  || |||| ||||||||||||||||| |||||||||    
T  28004563 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttttaa-gtagtttatgaaaaaaccatttatgaa 28004661  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| || |||||| || |||| ||||| |||||| ||||    
T  28004662 gatacaaatttcgtcagcaagagcttataaattaaaataa 28004701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 29378650 - 29378759
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || ||||||||||||| |  |||| |||||||||||||||||||||  ||||||| ||| ||||||||||||||||| |||    
T  29378650 ttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaactt 29378749  T
Q  128 atgaattaac 137  Q
    ||||||||||    
T  29378750 atgaattaac 29378759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 14691358 - 14691267
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| || ||| ||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  14691358 atgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataa 14691267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 44799383 - 44799520
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||| ||||| ||||||||||||||||||||||||| | || || |||||||||| || || |||||||||||| |||||||| | ||||||||    
T  44799383 ttattttagaacttatataaaatagtttatgcaaataaataagtttttat-tattatttat-aagtttttaaggtagtttttgaaaaaatagtttatgaa 44799480  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||| ||||||||| ||| ||||| |||||| ||||    
T  44799481 gatagaatattcgttagtgagagcttataaattaaaataa 44799520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 47654521 - 47654382
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||| || |||| || ||||| |||||||||     | ||||||||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  47654521 ttattttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaa 47654422  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      || ||||||||||||| ||| |||||||||||| ||||    
T  47654421 ggtacaattttcgttagtgagaacttatgaattaagataa 47654382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 18251573 - 18251492
Alignment:
Q  59 ttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| || ||||||| |||||||||||    
T  18251573 ttataaacttgttaaagtagtttatgaaaaa-caatttatgaatatacaattttcgttagcaaaatcttataaattaacataa 18251492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 47862724 - 47862839
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    |||||| ||||||||||||  |||| |||||||||| |||  || |||||||  |||||||||||| ||||||| |||||| ||||||||||| ||| ||    
T  47862724 agtttacgcaaataaataagcatta-tgtattatttttaagttttttaaggtgatttatgaaaaaataatttataaatatacaattttcgttaataaaat 47862822  T
Q  125 cttatgaattaacataa 141  Q
    |||||||||||||||||    
T  47862823 cttatgaattaacataa 47862839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 23137269 - 23137131
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||  |||| |||| |||||||| || ||||||||||||| || || ||||||||||||||| |||||   ||||||||    
T  23137269 ttattttagagcttatataaaataacttatacaaacaaataaatttttatgtattatttat-aagtttttaaggtagtttatgtaaaaatcgtttatgaa 23137171  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||| ||||| ||| ||||| |||||| ||||    
T  23137170 gatacaattttcattagtgagagcttataaattaaaataa 23137131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 29390657 - 29390519
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||| ||||| |||| |  ||||||||||||||||   || |||||||||| |||| ||||| |||||||||||||| ||||||| |||||||    
T  29390657 ttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatga-aaaacaacttatgaa 29390559  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||  |||  ||||||||||||||||    
T  29390558 gatacaattttcgttagctagaatttatgaattaacataa 29390519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 44613572 - 44613441
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| || ||||||||||||||||   || || ||||||| |||| |||||||||||||||||||||||||||| ||||||  ||| |||    
T  44613572 gagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgatacaat 44613473  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||  ||| | ||| |||||||||||| ||||    
T  44613472 ttttattaattagaacttatgaattaatataa 44613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 24371513 - 24371420
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaattt 96  Q
    |||||||||||||||| ||||| || |||||||||||||||| | |||||||||||||||| || || ||||||||||||||||| | |||||||    
T  24371513 ttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttat-aagtttttaaggtagtttatgaagatacaattt 24371420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 14676062 - 14675951
Alignment:
Q  6 tttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatata 105  Q
    |||||||||||| ||||| |  |||||||||||||||  | || |||||||||||||||  || ||||||||||||||||||||||| |||||||| |||    
T  14676062 tttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgaagata 14675964  T
Q  106 aaattttcgttag 118  Q
     ||||||| ||||    
T  14675963 caattttcattag 14675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 35246651 - 35246787
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||| ||| ||||| |  |||||||||||||||| | || |||||||||||| ||| || ||||||||||||||||||||||  |||||||     
T  35246651 ttattttagagcctatataaaacaacttatgcaaataaataagtttttatgtattattta-aaagtttttaaggtagtttatgaaaaaac--tttatgag 35246747  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||  ||||| |||||| ||||    
T  35246748 gatacaattttcgttagtgagggcttataaattaaaataa 35246787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 20888570 - 20888664
Alignment:
Q  20 aaaatagtttatgcaaataaataaa-tattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||| |||||||||||||||||||  | || |||||||||| |||| ||||  |||||||||||||||||||||||||||||| ||| |||||||    
T  20888570 aaaacagtttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttc 20888664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 991481 - 991617
Alignment:
Q  4 attttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaata 103  Q
    ||||||||||||||  |||| |  ||||||| |||||||| | || ||| |||||||||||  || |||||||||||||||||||||| ||||||||| |    
T  991481 attttagagcttataaaaaacaccttatgcacataaataagtttttatgcattatttataagttt-ttaaggtagtttatgaaaaaaccatttatgaaga 991579  T
Q  104 taaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || | ||||||||||| |||  |||| |||||| ||||    
T  991580 tacacttttcgttagtgagagtttataaattaaaataa 991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 47648540 - 47648655
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    ||||||||||||||||||||  || || ||||||| |  ||||||||||| ||||||||||||||||||| ||| || || || ||||||||||| | |     
T  47648540 agtttatgcaaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaacaatctattaagat-aatttttcgttagtgaaaa 47648638  T
Q  125 cttatgaattaacataa 141  Q
    |||||||||||| ||||    
T  47648639 cttatgaattaatataa 47648655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 2194151 - 2194010
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgta-ttatttataaacttgttaaggtagtttatgaaaaaaca--atttat 98  Q
    |||||||| || |||| |||||||  |||||||||||| ||| | || ||||| ||||||||||  || ||||||||||||||||||||| |  ||||||    
T  2194151 ttattttacagtttatataaaataacttatgcaaataattaagtttttatgtacttatttataagttt-ttaaggtagtttatgaaaaaaaataatttat 2194053  T
Q  99 gaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||| ||| ||||||||||||| ||| ||||| |||||| ||||    
T  2194052 gaagatataattttcgttagttagaacttataaattaaaataa 2194010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 38372537 - 38372676
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||| ||||||||| |||| || ||||||||||||||||    | |||||||||| ||||  |||| ||||||||||| |||||| ||  | | |||    
T  38372537 ttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaa 38372636  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     | | ||||||||||||| ||| |||||||||||||||||    
T  38372637 gaaacaattttcgttagtgagaacttatgaattaacataa 38372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 48949700 - 48949816
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgta-ttatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||| ||||| || |||||||||||||| | | || ||||| ||||||||||  || ||||||||||||||||||||||| |||||||    
T  48949700 ttatttta-agcttatataaaacaggttatgcaaataaatgagtttttatgtaattatttataagttt-ttaaggtagtttatgaaaaaacagtttatga 48949797  T
Q  101 atataaaattttcgttagt 119  Q
    | ||| ||| |||||||||    
T  48949798 agatataatattcgttagt 48949816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 1312092 - 1312231
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||||||||||||  |||| || |||| || |||||||| | || || ||||||||||||  || |||||| |||||||||||||||  |||||||    
T  1312092 tttattttagagcttataaaaaacagcttatacagataaataagtttttatatattatttataagttt-ttaaggcagtttatgaaaaaaccgtttatga 1312190  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||| | ||||| ||||| |||  |||| |||||| ||||    
T  1312191 atatacacttttcattagtgagagtttataaattaaaataa 1312231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 47511048 - 47511163
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtt--agtaagatc 125  Q
    ||||||||||||||||   || |||||||||| |||| |||||||||| ||| ||||||||||||  ||||||| ||| ||||||| ||   || ||| |    
T  47511048 ttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttcattggggtgagaac 47511147  T
Q  126 ttatgaattaacataa 141  Q
    ||||||||||||||||    
T  47511148 ttatgaattaacataa 47511163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 41094222 - 41094331
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||||   || |||||||| | |||| ||||| ||||| ||||||||||||  || ||||||| ||| |||||||||||||||||       
T  41094222 tttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagtaaga--a 41094317  T
Q  127 tatgaattaacata 140  Q
    ||||||||||||||    
T  41094318 tatgaattaacata 41094331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 18260952 - 18260884
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgt 70  Q
    ||||||||| ||||||| |||| |  ||||| |||||||||| ||||||||||||| ||||||||||||    
T  18260952 ttattttagtgcttatgaaaaacaacttatgtaaataaataagtattaatgtattagttataaacttgt 18260884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 25536257 - 25536340
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||||||| |||| ||||| || ||| | |||||||||| | || |||||||||||||||| || |||||||||||||||||    
T  25536257 ttattttagagtttatataaaacagcttacgtaaataaataagtttttatgtattatttataaa-tttttaaggtagtttatgaa 25536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 40629523 - 40629440
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||| ||||||||| |||| || |||| ||||||||||||  ||| ||||||||| |||| ||||| |||||||||||||||    
T  40629523 ttatttttgagcttatgcaaaacagcttatccaaataaataaacttta-tgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 43818938 - 43818846
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa-tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||| |||||||| ||  |||||||||||||| ||||||||   || ||||||| ||||| ||| |||||||||||| ||||    
T  43818938 atgtattatttataagcttgttaatgttatttatgaaaaaacagtttatgaaggttacaattttcattagtgagaacttatgaattaagataa 43818846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 30181577 - 30181668
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| |||||||||||| ||||||||  ||||||| |||   ||||| |||||  || |||||||||||||||||    
T  30181577 atgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatactgttttcattagtgggaacttatgaattaacataa 30181668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 43391751 - 43391810
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||||||| ||| ||||||    
T  43391751 tattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttt 43391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 21027604 - 21027510
Alignment:
Q  18 gtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    |||||| || ||||| ||| |||||| | || |||||||||||||||  || ||||||| ||||||||||||||| ||| |||| ||| ||||||    
T  21027604 gtaaaacagcttatgtaaacaaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaatttt 21027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 23356533 - 23356459
Alignment:
Q  67 ttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||| |||||| |||||||||||||| |||||||| |||  ||||| |||||| ||| | |||||||||||||||    
T  23356533 ttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgagaacctatgaattaacataa 23356459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 41677379 - 41677489
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||||| || |||||||||| ||||  |||| || ||||||||| |||||| ||  ||||||| ||| |||||| ||| || ||| ||    
T  41677379 ttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgagaact 41677478  T
Q  127 tatgaattaac 137  Q
    | |||||||||    
T  41677479 tgtgaattaac 41677489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 14593145 - 14593217
Alignment:
Q  20 aaaatagtttatgcaaataaataaatattaatgtattatt--tataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||| |||||||||||||||||  || ||||||||||  ||||| ||||| || ||||||||||||||||    
T  14593145 aaaatagcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaa 14593217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 29390473 - 29390514
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  29390473 ttatttttgagcttatgaaaaatagtttatgcaaataaataa 29390514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 9546479 - 9546423
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgt 70  Q
    |||||||||||| ||||||||||||||||||  || |||||||||| ||||| ||||    
T  9546479 ttatgtaaaataatttatgcaaataaataaagttttatgtattattcataaatttgt 9546423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 34922936 - 34923051
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttat--gaaaaaacaatttatgaatataaaattttcgttagtaagatc 125  Q
    ||||||||||||||||   || |||||||||| ||||  |||| ||||||||||||   ||||||||  || |||| ||| | ||||||||||| ||| |    
T  34922936 ttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgttagtgagaac 34923035  T
Q  126 ttatgaattaacataa 141  Q
    ||||||| ||||||||    
T  34923036 ttatgaactaacataa 34923051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 46744003 - 46744071
Alignment:
Q  73 aggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||| |||||||||||   |||||| ||| ||||||||||||| ||| |||| ||||||||||||    
T  46744003 aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaacttacgaattaacataa 46744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 48021746 - 48021616
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||  |||| | |||||||||||||||||    | || ||||||| |||| |||||||| ||||||||||| |||| || | ||||| ||| |||    
T  48021746 gagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatacaat 48021648  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||| | | |||||||||||| ||||    
T  48021647 tttcattagtgaaaacttatgaattaatataa 48021616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 7098204 - 7098118
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaac 91  Q
    |||| |||||| || |||||||||||| |||||||||||   || ||| |||||| ||||  |||| ||| ||||||||||||||||    
T  7098204 ttttcgagcttgtgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 16012698 - 16012812
Alignment:
Q  20 aaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagt 119  Q
    ||||||| ||| |||||||||||||| || |||| | ||  |||| ||||| || |||||||||||||||||   || |||| ||| |||||||||||||    
T  16012698 aaaatagcttacgcaaataaataaatgtttatgt-tcat--ataagcttgtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagt 16012794  T
Q  120 aagatcttatgaattaac 137  Q
     | | |||||||||||||    
T  16012795 gaaaacttatgaattaac 16012812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 28759896 - 28759812
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataa---aattttcgttagtaagatcttatgaatt 134  Q
    ||||||| |||| |||||||||||||||||| |||||| || |||| || ||||   ||| || |||||||||| ||||||||||    
T  28759896 tattattcataagcttgttaaggtagtttataaaaaaataacttataaagataatataatatttgttagtaagaacttatgaatt 28759812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 39279458 - 39279548
Alignment:
Q  52 gtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtt-agtaagatcttatgaattaacataa 141  Q
    |||||||| |||| ||||||||||| |||||||||||| ||  ||| ||| ||| |||||||||| | | ||| | |||||||||||||||    
T  39279458 gtattattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataa 39279548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 7775395 - 7775354
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||||||| |||| ||||||| |||||||||||||||||    
T  7775395 ttattttagagtttatataaaataatttatgcaaataaataa 7775354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 10383619 - 10383586
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||||| ||||||||||||||||||||||||    
T  10383619 gagcttatgaaaaatagtttatgcaaataaataa 10383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19308572 - 19308511
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    ||||| |||||||||||  || |||||||||| ||||  |||||| ||||||||||||||||    
T  19308572 ttatgaaaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaa 19308511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 37465943 - 37465854
Alignment:
Q  53 tattatttataaacttgttaaggtagtttat-gaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||| |||||||||||||| |||||||| |||||||||| |||| || ||| ||| || ||| |  ||| |||||||||||| ||||    
T  37465943 tattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataa 37465854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 8180647 - 8180611
Alignment:
Q  53 tattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    |||||||||||| |||||||||||||||||| |||||    
T  8180647 tattatttataagcttgttaaggtagtttataaaaaa 8180611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 9024791 - 9024883
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||    |||||| |||||||||||||||| || ||||||||  || ||||||||||  | ||| |||||||||||| ||||    
T  9024791 atgtattatttatacgtgtgttaatgtagtttatgaaaaaaacagtttatgaaggtacaattttcgttgatgagaacttatgaattaagataa 9024883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 18265527 - 18265448
Alignment:
Q  61 ataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||||||| |||||||||| ||||||| ||||||| ||||||   |  ||||||| | |||||||||||| ||||    
T  18265527 ataaacttgttaagatagtttatga-aaaacaagttatgaagataaaaaaattcttagtaaaaacttatgaattaatataa 18265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 31613741 - 31613681
Alignment:
Q  33 caaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaa 93  Q
    ||||||||||||| |  |||||||||| || | ||||| || |||||||||||||||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaacaa 31613681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48895275 - 48895358
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatga 85  Q
    |||||||| ||||||||| ||||  |||| |||||||||||||  ||| || ||||||| |||| ||| | ||||||||||||||    
T  48895275 tttatttttgagcttatgcaaaaccgttt-tgcaaataaataagcattcatatattattcataagcttatcaaggtagtttatga 48895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 10619208 - 10619349
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||||||||  || ||||||||||||||  ||  ||||||||||||| |||  ||||||||||||||||||||||||||| |||||||    
T  10619208 ttattttagagcttatgtaaagcagcttatgcaaataaatgcat--taatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaacttatgaa 10619305  T
Q  102 tata-aaat---tttcgttagtaagatcttatgaattaacataa 141  Q
    |||| ||||   ||||||||||||||||||||||||||||||||    
T  10619306 tatacaaataaatttcgttagtaagatcttatgaattaacataa 10619349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 21610151 - 21610017
Alignment:
Q  7 ttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataa 106  Q
    |||||||||||| |||| || |||||||||||||||  | || ||| ||||||||||| |||||||| |||||||||||||||| | ||||||||||||     
T  21610151 ttagagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatat 21610052  T
Q  107 aattttcgttagtaagatcttatgaattaacataa 141  Q
    ||||||||||||||||| ||||| |||||| ||||    
T  21610051 aattttcgttagtaagaacttataaattaaaataa 21610017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 10184436 - 10184298
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||| |||||||||| | || || ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  10184436 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataagttt-ttaaggtagtttatgaaaaaacaatttatgaa 10184338  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     | | ||||||||||||||||| ||||| |||||| ||||    
T  10184337 gaaacaattttcgttagtaagagcttataaattaaaataa 10184298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 32615521 - 32615383
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| ||||| || |||||||||||||||| | || |||||||||||||||| || ||||||||||| |||||||||| |||||||||    
T  32615521 ttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattt-ttaaggtagttgatgaaaaaactatttatgaa 32615423  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||||||||||||| ||| | ||| |||||| ||||    
T  32615422 gatacaattttcgttagtgagagcatataaattaaaataa 32615383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 8011153 - 8011020
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg--aaaaaacaatttatg 99  Q
    ||||||||||||||||||| | ||| | ||| ||||||||||  |||||| ||||||||||||  |||| |||||||||| ||  |||||| || |||||    
T  8011153 ttattttagagcttatgtacagtagctaatgaaaataaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaaaaaaacttatg 8011054  T
Q  100 aatataaaattttcgttagtaagatcttatgaat 133  Q
    |||||| |||||||||||||||||||||||||||    
T  8011053 aatatacaattttcgttagtaagatcttatgaat 8011020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 21891443 - 21891306
Alignment:
Q  4 attttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaata 103  Q
    ||||| ||||||||| | ||||| |||||||||||||||| | || || ||||||| |||| ||||| || ||||||||||||| ||||| ||||||| |    
T  21891443 atttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaaga 21891344  T
Q  104 taaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || |||||||||| | |||| |||||||||||||||||    
T  21891343 tagaattttcgttcgcaagaacttatgaattaacataa 21891306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 1468155 - 1468292
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| |||||||| |||||||||||||||| | || ||||||||||||| |  || ||||||||||||||| ||||||| ||||||||    
T  1468155 ttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttat-aggtttttaaggtagtttatg-aaaaacagtttatgaa 1468252  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     | |  |||||||||||||||| ||||| |||||| ||||    
T  1468253 gaaaccattttcgttagtaagagcttataaattaaaataa 1468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 4808551 - 4808689
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || |||||||||||||| | | || |||||||||||||||  || ||||| ||||||||||||||||| ||||||||    
T  4808551 ttattttagagcttatataaaacagcttatgcaaataaatgagttttcatgtattatttataagttt-ttaagatagtttatgaaaaaacagtttatgaa 4808649  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||| ||| ||||||||||||  ||||| |||||| ||||    
T  4808650 gatacaatattcgttagtaagggcttataaattaaaataa 4808689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 29623576 - 29623445
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| |  ||||||||||||||||   || || |||||||||| |  ||||||| ||||||||||||||||||| ||||||| ||||| |    
T  29623576 gagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaagt 29623477  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||| |||||||||||||||||    
T  29623476 tttcgttagtgagaacttatgaattaacataa 29623445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 17914925 - 17915051
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||||| ||||| || ||||||||||||||| || || ||||||||||||| || || |||||||||||||||||||||    |||||||    
T  17914925 ttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaatgggttatgaa 17915023  T
Q  102 tataaaattttcgttagtaagatcttat 129  Q
     ||| ||||||||||||| ||| |||||    
T  17915024 aatacaattttcgttagtcagaacttat 17915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 32165344 - 32165229
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    |||||||| |||||||||| | || |||||||||||||||  || |||| |||||||||||||||||| |||||||| ||| ||||||||||||| |||     
T  32165344 agtttatgaaaataaataagtttttatgtattatttataatttt-ttaaagtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagag 32165246  T
Q  125 cttatgaattaacataa 141  Q
    ||||| |||||| ||||    
T  32165245 cttataaattaaaataa 32165229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 3830018 - 3829887
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| ||||  | |||||||||||||||    || || | ||||| ||||| || ||| |||||||||||||||||||| ||||||| |||||||    
T  3830018 gagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaaat 3829919  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    ||| |||| ||||| |||||||||||||||||    
T  3829918 ttttgttaataagaacttatgaattaacataa 3829887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 6632638 - 6632737
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||  |||| |  |||||||||||||||    || |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6632638 ttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttatgaa 6632737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 16589753 - 16589868
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    |||||||| |||||||| ||| || |||||||||| ||||  |||| || | ||||||||||||||||||||||||| |||  |||||||||| | |||     
T  16589753 agtttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaa 16589852  T
Q  125 cttatgaattaacata 140  Q
    ||||||||||||||||    
T  16589853 cttatgaattaacata 16589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 16605627 - 16605512
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagat 124  Q
    |||||||| |||||||| ||| || |||||||||| ||||  |||| || | ||||||||||||||||||||||||| |||  |||||||||| | |||     
T  16605627 agtttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgagaa 16605528  T
Q  125 cttatgaattaacata 140  Q
    ||||||||||||||||    
T  16605527 cttatgaattaacata 16605512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 10730312 - 10730252
Alignment:
Q  38 aaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10730312 aaataaatatttatgtattatttataaacttgttaatgtagtttatgaaaaaacagtttat 10730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 2034310 - 2034197
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || |||||||||||||||  |||| |||||||||||||||||||||| |||  || ||| ||||||||| ||||| | |||    
T  2034310 ttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataactt 2034211  T
Q  128 atgaattaacataa 141  Q
    |||| | |||||||    
T  2034210 atgattcaacataa 2034197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 2255739 - 2255852
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||||||||||||| |   || |||||| ||| |||| |||||||||||| ||||||||||||||  ||||||| ||| |||||| | |||| ||| | |    
T  2255739 ttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaacat 2255838  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  2255839 atgaattaacataa 2255852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 10873968 - 10874102
Alignment:
Q  5 ttttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatat 104  Q
    |||| ||| ||||| ||||||| ||||||| ||||||||   || ||  |||||| |||| |||||||||||||||||||| ||||||  ||||||| ||    
T  10873968 tttttgagattatgcaaaatagcttatgcatataaataagcttttat--attattaataagcttgttaaggtagtttatgagaaaacagcttatgaagat 10874065  T
Q  105 aaaattttcgttagtaagatcttatgaattaacataa 141  Q
    | |||||| ||| || | | |||||||||||||||||    
T  10874066 acaattttagttggtgaaaacttatgaattaacataa 10874102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 29052338 - 29052451
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| |||| |||||||  || |||||||||||||||  ||||||||||| |||||||||||||| |||||||  ||| |||| ||||| || ||| |||    
T  29052338 ttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtttgtgagagctt 29052437  T
Q  128 atgaattaacataa 141  Q
    || |||||| ||||    
T  29052438 ataaattaaaataa 29052451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 32675970 - 32675857
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || || ||||||| |||| |||  |||||| ||||||||||||| || ||||||| ||| ||||||| ||||| ||| |||    
T  32675970 ttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaactt 32675871  T
Q  128 atgaattaacataa 141  Q
    ||||||||| ||||    
T  32675870 atgaattaatataa 32675857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 6758614 - 6758745
Alignment:
Q  10 gagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaat 109  Q
    ||||||||| |||| |  ||||||||||||||||   ||  | ||||||  |||| ||||||||||||||||||||||||  || |||| || ||| ||     
T  6758614 gagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaa 6758713  T
Q  110 tttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| ||| |||||||||||| ||||    
T  6758714 tttcgttagtgagaacttatgaattaatataa 6758745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 10755361 - 10755251
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || | |||||||| |||| ||||| ||||||  ||||||||||| |  |||||||   | ||||||||||||||||| |||    
T  10755361 ttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa---acaattttcgttagtaagaactt 10755265  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  10755264 atgaattaacataa 10755251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 2027257 - 2027144
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    ||||||||||||||||   || ||| |||||| | ||  |||| |||  ||||||||||||||||  ||||||| ||| || ||| |||||||||| |||    
T  2027257 ttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaactt 2027158  T
Q  128 atgaattaacataa 141  Q
    ||||||||||||||    
T  2027157 atgaattaacataa 2027144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 16989830 - 16989729
Alignment:
Q  40 ataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacat 139  Q
    |||||| || |||||||||| ||| | |||| || ||| |||| ||||||||| |||||||| |||  ||||||||||||| || ||||| |||||||||    
T  16989830 ataaatttttatgtattattcatatatttgtgaaagtattttaagaaaaaacagtttatgaagatatgattttcgttagtacgaacttataaattaacat 16989731  T
Q  140 aa 141  Q
    ||    
T  16989730 aa 16989729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 9894745 - 9894833
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||| ||||||||  |||| || ||| ||||||||||||   || |||||||||||||||  ||||||||||| ||||||||||||    
T  9894745 ttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 23239226 - 23239365
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||| ||||||||| ||||||  |||| |||||||||||   || || ||||||| |||| |||||||| || |||||| ||||| ||| ||||||    
T  23239226 tttatttt-gagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatga 23239324  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacataa 141  Q
      ||| || |||| ||||| ||| |||||||||||| ||||    
T  23239325 cgatacaactttccttagtgagaacttatgaattaatataa 23239365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 7267763 - 7267866
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatt 110  Q
    |||||| ||||||  | ||||||||| ||||||   || |||||||||| |||| ||||  |||||||||||||||||||||| |||||||  || ||||    
T  7267763 agcttaagtaaaacggcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaatt 7267862  T
Q  111 ttcg 114  Q
    ||||    
T  7267863 ttcg 7267866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 7576916 - 7576829
Alignment:
Q  54 attatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||| |||| ||||||||  || ||||| |||||||| |||||||| ||| ||||||||||  ||||| ||||| |||||||||||    
T  7576916 attattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattttcgttgataagaacttattaattaacataa 7576829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 10687287 - 10687428
Alignment:
Q  3 tattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtatt---atttataaacttgttaaggtagtttatgaaaaaacaatttatg 99  Q
    |||||| ||||||||  |||| || ||||||||||||||||   || |||||||   ||| |||| | | ||||||||||||||| |||||||| |||||    
T  10687287 tatttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatg 10687386  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     | ||| ||||||||||||  ||| |||||||| | ||||||    
T  10687387 gagatacaattttcgttagcgagaacttatgaactgacataa 10687428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 15054644 - 15054558
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    |||||||| ||||||  |||| || ||| ||||||||||| ||||||||||| ||| ||||||||||||| | | ||||| ||||||    
T  15054644 atgtattagttataagtttgtaaaagtattttatgaaaaagcaatttatgaagatacaattttcgttagttaaaacttataaattaa 15054558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 21025308 - 21025246
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||||||||||||   || |||||||||  |||| |||||||||||||||||||||||||    
T  21025308 ttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaa 21025246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 25430870 - 25430785
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa 90  Q
    ||||||| |||||||||||||| || |||| |||||||||||  ||| |||   |||| |||| ||||| |||||||||||||||||||    
T  25430870 ttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatg---tattcataagcttgtcaaggtagtttatgaaaaaa 25430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 34413346 - 34413408
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaatttt 112  Q
    |||||||||||||||  |||| || |||||||||||||||||||||||| || ||| ||||||    
T  34413346 atgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaatttt 34413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 716032 - 715939
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatt 95  Q
    |||||||| |||||||| |||  |  ||||| |||||||||| | |  ||||||||||||||||||||| ||||| ||||||||| | ||||||    
T  716032 ttattttaaagcttatgcaaatcaacttatgtaaataaataagtttctatgtattatttataaacttgtaaaggtggtttatgaagatacaatt 715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 12816823 - 12816864
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  12816823 ttatttttgagcttatgaaaaatagtttatgcaaataaataa 12816864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 24625857 - 24625917
Alignment:
Q  29 tatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaa 89  Q
    ||||||||||||||    || |||||||||| |||| ||||||||||||||||||||||||    
T  24625857 tatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaa 24625917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 9582554 - 9582495
Alignment:
Q  11 agcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgt 70  Q
    |||||||| | ||||  |||||||||||||||||| || ||||||||||||||| |||||    
T  9582554 agcttatgcagaataacttatgcaaataaataaatttttatgtattatttataaccttgt 9582495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 13429488 - 13429571
Alignment:
Q  56 tatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc-gttagtaagatcttatgaattaaca 138  Q
    |||| |||| ||||| || |||||||||||||||||| |||||||  ||| |||||||  ||||| ||| ||||||||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttcatttagtgagaacttatgaattaaca 13429571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 23314908 - 23314782
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||| ||||| || |||||||||||||||| | || |||  ||||||||||  || ||||||| |||||| ||||||   || ||||||||| | |||||    
T  23314908 ttatataaaacagcttatgcaaataaataagtttttatgcgttatttataagttt-ttaaggtcgtttatcaaaaaattgttcatgaatatacagttttc 23314810  T
Q  114 gttagtaagatcttatgaattaacataa 141  Q
    |||||| ||| ||||| |||||| ||||    
T  23314809 gttagtcagagcttataaattaaaataa 23314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 23325075 - 23324949
Alignment:
Q  14 ttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttc 113  Q
    |||| ||||| || |||||||||||||||| | || |||  ||||||||||  || ||||||| |||||| ||||||   || ||||||||| | |||||    
T  23325075 ttatataaaacagcttatgcaaataaataagtttttatgcgttatttataagttt-ttaaggtcgtttatcaaaaaattgttcatgaatatacagttttc 23324977  T
Q  114 gttagtaagatcttatgaattaacataa 141  Q
    |||||| ||| ||||| |||||| ||||    
T  23324976 gttagtcagagcttataaattaaaataa 23324949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 4272386 - 4272476
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgtta 117  Q
    ||||||||||||||||| | || |||||||||  ||||  || | || ||||||||| |||||||||||||| || | | |||||||||||    
T  4272386 tttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgtta 4272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 10054386 - 10054456
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttat 98  Q
    ||||||||||||||||   || |||||||||| ||||  |||| || |||||||||||||||| |||||||    
T  10054386 ttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat 10054456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 10755205 - 10755246
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa 43  Q
    ||||||| |||||| || ||||||||||||||||||||||||    
T  10755205 ttatttttgagcttctgaaaaatagtttatgcaaataaataa 10755246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 34223633 - 34223492
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    ||||||||||| ||||| ||||| |  ||||| |||||||||| | || |||| ||||||||||  ||||| |  || | ||| |||||||| |||||||    
T  34223633 tttattttagaacttatataaaacaacttatgaaaataaataagtttttatgtgttatttataagtttgtttatatattctataaaaaaacagtttatga 34223534  T
Q  101 atata-aaattttcgttagtaagatcttatgaattaacataa 141  Q
    | ||| || |||| |||||| ||| ||||| |||||| ||||    
T  34223533 agatacaattttttgttagtgagagcttataaattaaaataa 34223492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21871391 - 21871308
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatga 85  Q
    ||||||||  || |||||||||| |  |||||||||||| ||||  || |||||||||| || ||||||| ||||||||||||||    
T  21871391 tttattttttagtttatgtaaaacaacttatgcaaataagtaaacttttatgtattattgat-aacttgtcaaggtagtttatga 21871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 1273 - 1396
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||||||||| |||| |  |||||||||| |||||  |||||| ||||||||||||  ||||||||||||||||||||||||||| |||| ||    
T  1273 ttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagttataaa 1372  T
Q  102 tataaaattttcgttagtaagatc 125  Q
    |||| |||||||||||||||||||    
T  1373 tatacaattttcgttagtaagatc 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 227711 - 227825
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaa-caatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||| |||||||||  ||||||||| |||||||||  |||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  227711 ttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgttagtaagatct 227810  T
Q  127 tatgaattaacataa 141  Q
    |||||||||||||||    
T  227811 tatgaattaacataa 227825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 242746 - 242608
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| ||||||| ||||||||||||||||||||||||| | || ||||||||| ||| || || | ||| || |||||| |||||||  |||||||    
T  242746 ttattttatagcttatataaaatagtttatgcaaataaataagtttttatgtattatatat-aagttttcaagctattttatggaaaaacaggttatgaa 242648  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     |||  |||||||||||  ||| ||||| |||||| ||||    
T  242647 gatacgattttcgttagcgagagcttataaattaaaataa 242608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 279098 - 278965
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    ||||||||||| |||| |||||||  ||||||||||| |||||| || ||||||||||||| || || |||||||||||||||||||||| |||||| ||    
T  279098 ttattttagagattatataaaataacttatgcaaatacataaatttttatgtattatttat-aagtttttaaggtagtttatgaaaaaaccatttataaa 279000  T
Q  102 tataaaattttcgttagtaagatcttatgaattaa 136  Q
     ||| || ||| |||||| ||| ||||| ||||||    
T  278999 gatacaaattttgttagtgagagcttataaattaa 278965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 40783 - 40701
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    ||||||||||| |||| ||||| |  |||||||||||||||||| || ||||||||||||| || |  |||||||||||||||||    
T  40783 ttattttagagtttatataaaacaacttatgcaaataaataaat-tttatgtattatttat-aagtgtttaaggtagtttatgaa 40701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 97313 - 97179
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataa-atattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatga 100  Q
    |||||||  ||||| |||||||||| ||||||||||||||||  |||| ||||| |||| |||| || || |||||||||||||||||||||  |||||     
T  97313 ttattttttagcttgtgtaaaatagcttatgcaaataaataagctatt-atgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttatg- 97216  T
Q  101 atataaaattttcgttagtaagatcttatgaattaacat 139  Q
      ||| ||||||||||||| ||| |||||||||||||||    
T  97215 --atacaattttcgttagtgagaacttatgaattaacat 97179  T

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Target: scaffold0100 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 38559 - 38421
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||| || |||| ||||||||||||||||||||||||| | || |||||||||||||||| || | ||| || |||||| |||||||  |||||||    
T  38559 ttattttaaagtttatataaaatagtttatgcaaataaataagtttttatgtattatttataaa-ttttcaagctattttatggaaaaacaggttatgaa 38461  T
Q  102 tataaaattttcgttagtaagatcttatgaattaacataa 141  Q
     ||   |||||||||||  ||| ||||| |||||| ||||    
T  38460 gatgcgattttcgttagcgagagcttataaattaaaataa 38421  T

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Target: scaffold0012 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 178505 - 178612
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatg-aaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    ||||||||||||||||   || |||||||||||||||  || |||||||| |||||| |||||| | |||||||| ||| ||||||||||||||||| ||    
T  178505 ttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattttcgttagtaagagct 178604  T
Q  127 tatgaatt 134  Q
    ||| ||||    
T  178605 tataaatt 178612  T

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Target: scaffold1130 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2227 - 2310
Alignment:
Q  1 tttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaa 86  Q
    |||||||||||| |||| ||||| |  |||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||    
T  2227 tttattttagagtttatataaaacaacttatgcaaataaataaat-ttaatgtattatttataaa-tgtttaaggtagtttatgaa 2310  T

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Target: scaffold0512 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 4076 - 4182
Alignment:
Q  34 aaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaat 133  Q
    ||||||||||   |||||||||||||||||| ||||| ||| ||||||||||||||| |  ||||| | ||| |||||||||||||  || ||||| |||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtgggaacttataaat 4174  T
Q  134 taacataa 141  Q
    ||||||||    
T  4175 taacataa 4182  T

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Target: scaffold0332 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 14827 - 14716
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatctt 127  Q
    |||| |||||||||||   || |||||||||| ||||  || | || ||||||||||||||| || ||||| |||||| ||||||||||||| ||| |||    
T  14827 ttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgagaactt 14728  T
Q  128 atgaattaacat 139  Q
    || |||||||||    
T  14727 ataaattaacat 14716  T

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Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 109074 - 108965
Alignment:
Q  27 tttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatct 126  Q
    |||||||||||||||||   || |||||||| | |||| ||||| ||||| ||||||||||||  || ||||||| ||| |||||||||||||||||       
T  109074 tttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagtaaga--a 108979  T
Q  127 tatgaattaacata 140  Q
    ||||||||||||||    
T  108978 tatgaattaacata 108965  T

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Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 24724 - 24865
Alignment:
Q  2 ttattttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaa--ggtagtttatgaaaaaacaatttatg 99  Q
    |||||||| |||||| | |||| || ||||||||||||||||   || |||||||||| |||| ||||| ||  |||||||||||||||||||  | ||     
T  24724 ttattttatagcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatc 24823  T
Q  100 aatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    || ||| ||| ||| ||||| ||| ||||| |||||||||||    
T  24824 aagatacaatattcattagtgagaacttataaattaacataa 24865  T

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Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 24448 - 24357
Alignment:
Q  50 atgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaacataa 141  Q
    |||||||||| |||| ||||| ||||||||| || ||| ||||| ||| ||| ||| ||||||||||||||| | ||| ||||||| |||||    
T  24448 atgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatataattttcgttagtaaaaacttgtgaattatcataa 24357  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 59249 - 59345
Alignment:
Q  4 attttagagcttatgtaaaatagtttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||| ||||| || |||||||||||||||| | || | ||||||||||| || || ||||||| || | |||||||||  ||||||||    
T  59249 attttagagcttatataaaacagcttatgcaaataaataagtttttaagtattatttat-aagtttttaaggttgtatttgaaaaaacggtttatgaa 59345  T

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Target: scaffold0091 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 2663 - 2623
Alignment:
Q  25 agtttatgcaaataaataaatattaatgtattatttataaa 65  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  2663 agtttatgcaaataaagaagtattaatgtattatttataaa 2623  T

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Target: scaffold0091; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 2585 - 2534
Alignment:
Q  85 aaaaaacaatttatgaatataaaattttcgttagtaagatcttatgaattaa 136  Q
    ||||||||  |||||| | || ||||||||||||||||||||||||||||||    
T  2585 aaaaaacagcttatgagtgtataattttcgttagtaagatcttatgaattaa 2534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 142344 - 142417
Alignment:
Q  28 ttatgcaaataaataaatattaatgtattatttataaacttgttaaggtagtttatgaaaaaacaatttatgaa 101  Q
    |||||||||||||| |   || |||||||||| ||| |||| |||| ||| ||||||||||||||| |||||||    
T  142344 ttatgcaaataaatgagcttttatgtattattcatatacttattaatgtaatttatgaaaaaacaaattatgaa 142417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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