View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0928_high_207 (Length: 251)
Name: NF0928_high_207
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0928_high_207 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 9641673 - 9641914
Alignment:
| Q |
10 |
aataatatgaggcaatcaaatatttcaaaggtgaactatgattaaactattttcatataagttatagttcataaaaaatcttaa-gagaatttattgaaa |
108 |
Q |
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| T |
9641673 |
aataatatgaggcaatcaaatatttcaaaggtgaactatgattaaactattttcatataagttatagttcataaaaaatcttaaagagaatttattgaaa |
9641772 |
T |
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| Q |
109 |
gaaactgaatatttaacttatgataataaatcataagctatatttatagttcatccaaatattcaggcaactgtttatgatagaatctagtagacttaat |
208 |
Q |
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| T |
9641773 |
gaaactgaatatt-aacttatgataataaatcataagctatatttatagttcatccaaatattcaggcaactgtttatgatagaatctagtagacttaat |
9641871 |
T |
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| Q |
209 |
gattttgatattatggtgatataaatgataaacttaccacata |
251 |
Q |
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| T |
9641872 |
gattttgatattatggtgatataaatgataaacttaccacata |
9641914 |
T |
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