View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_high_24 (Length: 570)

Name: NF0928_high_24
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_high_24
NF0928_high_24
[»] chr7 (30 HSPs)
chr7 (44-306)||(22841169-22841446)
chr7 (29-168)||(22805825-22805965)
chr7 (29-192)||(22876432-22876601)
chr7 (29-158)||(22831547-22831677)
chr7 (29-253)||(22873662-22873878)
chr7 (78-252)||(22894523-22894712)
chr7 (29-158)||(22840574-22840704)
chr7 (29-133)||(22858935-22859040)
chr7 (350-427)||(22894777-22894854)
chr7 (350-427)||(22841468-22841545)
chr7 (69-158)||(22886060-22886149)
chr7 (29-161)||(22815543-22815682)
chr7 (29-164)||(22842686-22842825)
chr7 (345-410)||(22806123-22806188)
chr7 (345-431)||(22816011-22816096)
chr7 (339-431)||(22831832-22831924)
chr7 (344-411)||(22810467-22810534)
chr7 (349-415)||(22842991-22843057)
chr7 (29-124)||(22810160-22810258)
chr7 (184-253)||(22840745-22840814)
chr7 (84-148)||(22881124-22881189)
chr7 (212-253)||(22810360-22810401)
chr7 (339-431)||(22859169-22859262)
chr7 (359-428)||(22886327-22886396)
chr7 (29-89)||(22894460-22894520)
chr7 (370-418)||(22899058-22899104)
chr7 (372-427)||(22840895-22840950)
chr7 (212-253)||(22806031-22806072)
chr7 (178-243)||(22886179-22886243)
chr7 (29-89)||(22889808-22889868)
[»] chr1 (2 HSPs)
chr1 (339-431)||(21149814-21149906)
chr1 (29-128)||(21150098-21150198)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 44 - 306
Target Start/End: Original strand, 22841169 - 22841446
Alignment:
Q  44 gtgaataataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtctaatttggatcctactaa 143  Q
    |||||||||||| ||| || |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  22841169 gtgaataataattcttatgcagttatgttcagtgtttattatttataagattttgtccaaagtgaagaaaaaattgcaagtcttatttgggtcctactaa 22841268  T
Q  144 gaaatgtcctggaacttaacttagccacgttttttca---------------aatggttactaaagttgcatatctcatttgggtccaactaagaaatgt 228  Q
    ||||||||||||||| ||||||||| | |  || |||               ||||||||||||  |||| |||||||||||||||| ||||||||||||    
T  22841269 gaaatgtcctggaacctaacttagctatgaattatcaccaaaagaaacatcaaatggttactaatattgcgtatctcatttgggtcctactaagaaatgt 22841368  T
Q  229 cttatttagtttagtaaaaatgaatttttgtgttactcatatggtaccatttgaataattgtgcacatttgaaccacc 306  Q
    || |||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  22841369 ctcatttagtttagtaaaaatgaatttttgtgtaactcatttgggaccatttgaatagttgtgcacatttgaaccacc 22841446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 22805825 - 22805965
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 127  Q
    |||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22805825 acatgattatagtttgagaatgaataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 22805924  T
Q  128 atttggatcctactaagaaatgtcctggaacttaacttagc 168  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  22805925 atttgggtcctagtaagaaatgtcctggaacataacttagc 22805965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 22876432 - 22876601
Alignment:
Q  29 acatgattattggttgtgaataataatgcttgtgtagttctgttcggtgtttattatttataag------attttgtcctaagtgaagaaaaaattgcaa 122  Q
    |||||||||| | ||||| |||||||||||| || |||||||||   |||||||||||||| |       ||||||||||||||||||||||||||||||    
T  22876432 acatgattatagtttgtggataataatgcttatgcagttctgttgattgtttattatttattatttatatattttgtcctaagtgaagaaaaaattgcaa 22876531  T
Q  123 gtctaatttggatcctactaagaaatgtcctggaacttaacttagccacgttttttcaaatggttactaa 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22876532 gtctaatttggatcctactaagaaatgtcctggaacttaacttagccacgtattttcaaatggttactaa 22876601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 22831547 - 22831677
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 127  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | |||    
T  22831547 acatgattatagtttgtgaatgaataatgcttgtgtagttctgttcggtgtttattatttataagattttgtccaaagtgaagtaaaaattgcatgccta 22831646  T
Q  128 atttggatcctactaagaaatgtcctggaac 158  Q
    ||||||  |||||||||||||||||||||||    
T  22831647 atttgggacctactaagaaatgtcctggaac 22831677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 253
Target Start/End: Original strand, 22873662 - 22873878
Alignment:
Q  29 acatgattattggttgtgaataataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtctaa 128  Q
    |||||||||| | |||||||||||||||||| || |||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||  |    
T  22873662 acatgattatggattgtgaataataatgcttatgcagttctattcagtgtttattatttatatgattttgtcctaagtgaagaaaaatttgcaggtcaca 22873761  T
Q  129 tttggatcctactaagaaatgtcctggaacttaacttagccacgttttttcaaatggttactaaagttgcatatctcatttgggtccaactaagaaatgt 228  Q
    ||||| |||| || |||||| ||| ||||| ||||||| | |||        | |  |||||||| |||||| |||||||||||||| ||||||||||||    
T  22873762 tttggttcctgcttagaaatatcccggaacctaacttacctacg--------acttattactaaaattgcatttctcatttgggtcctactaagaaatgt 22873853  T
Q  229 cttatttagtttagtaaaaatgaat 253  Q
    || ||||||| || | |||||||||    
T  22873854 ctcatttagtatactgaaaatgaat 22873878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 78 - 252
Target Start/End: Original strand, 22894523 - 22894712
Alignment:
Q  78 tttattatttataagattttgtcctaagtgaagaaaaaattgcaagtctaatttggatcctactaagaaatgtcctggaacttaacttagccacgtttt- 176  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| | |  ||     
T  22894523 tttattatgtataagattttgtcctaggtgaagaaaaaattgcaagtctaatttgggtcctactaagaaatgtcttggaacctaacttagctatgaatta 22894622  T
Q  177 --------------ttcaaatggttactaaagttgcatatctcatttgggtccaactaagaaatgtcttatttagtttagtaaaaatgaa 252  Q
                   |||||||||||||||| | || |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  22894623 tcaccaaaagaaacatcaaatggttactaaaatcgcgtatctcatttgggtcctactaagaaatgtctcatttagtttagtaaaaatgaa 22894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 22840574 - 22840704
Alignment:
Q  29 acatgattattggttgtgaataa-taatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 127  Q
    |||||||||| | |||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||  ||||||| || |||||    
T  22840574 acatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattatttataagattttgtggtaagtgaaagaaaaatttcatgtcta 22840673  T
Q  128 atttggatcctactaagaaatgtcctggaac 158  Q
    |||||| ||||||||||||||||||||||||    
T  22840674 atttgggtcctactaagaaatgtcctggaac 22840704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 22858935 - 22859040
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 127  Q
    |||||||| | | |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||    
T  22858935 acatgattttagtttgtgaatgaacaatgcttgtgtagttctgttcggtgtttgttatttataagattttgtgctaagtgaaggaaaaattgcatgtcta 22859034  T
Q  128 atttgg 133  Q
    ||||||    
T  22859035 atttgg 22859040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 22894777 - 22894854
Alignment:
Q  350 ttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttctt 427  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22894777 ttttcaatgtttacgtattgagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttctt 22894854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 22841468 - 22841545
Alignment:
Q  350 ttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttctt 427  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22841468 ttttcaatgtttacgtattgaatgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttctt 22841545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 22886060 - 22886149
Alignment:
Q  69 tgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtctaatttggatcctactaagaaatgtcctggaac 158  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| || |||||||||||||| |||| ||||    
T  22886060 tgttcggtgtttattatttataagattttgtgctaagtgaaggaaaaattgcatgtctaattcgggtcctactaagaaatttcctagaac 22886149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 22815543 - 22815682
Alignment:
Q  29 acatgattattggtt-gtgaat-aataatgcttgtgtagttctgttcggtgttta-ttatttataagattttgtcctaagtgaagaaaaaattgcaagtc 125  Q
    ||||||||||| ||| |||||| || ||||||| |||||||||||| | |||||  |||||||||||||||||| |||||||||| |||||||||| |||    
T  22815543 acatgattattagtttgtgaatgaacaatgcttctgtagttctgtttgatgttttgttatttataagattttgtgctaagtgaaggaaaaattgcatgtc 22815642  T
Q  126 taatttggatcc----tactaagaaatgtcctggaactta 161  Q
    |||||||| |||    ||||||||||||||||||||||||    
T  22815643 taatttgggtcctaggtactaagaaatgtcctggaactta 22815682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 22842686 - 22842825
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctg---ttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagt 124  Q
    |||||||||||| |||||||| || ||||||| ||||||||||   |||  |||||||||||||||||||||||| | |||||||||  ||| | | | |    
T  22842686 acatgattattgtttgtgaatgaacaatgcttctgtagttctgctgttcaatgtttattatttataagattttgtgccaagtgaagatgaaaataccaat 22842785  T
Q  125 ctaatttggatcctactaagaaatgtcctggaacttaact 164  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  22842786 ctaatttgggtcctactaagaaatgtcctggaacctaact 22842825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 22806123 - 22806188
Alignment:
Q  345 aatgtttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatca 410  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || ||||||    
T  22806123 aatgtttttcaatgtttacatattaagtgtttgatgctaaattgaatatgtgaaatcaagacatca 22806188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 345 - 431
Target Start/End: Original strand, 22816011 - 22816096
Alignment:
Q  345 aatgtttttcaatgtttacgt-attcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttcttaaaa 431  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||||||||    
T  22816011 aatgtttttcaatgttcacattattaagtgtttgatgctaaattgaatatg--aaattaaaacatcagtgtcatctaatttcttaaaa 22816096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 22831832 - 22831924
Alignment:
Q  339 tgggagaatgtttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttcttaaaa 431  Q
    |||| |||| |||||||| || | | |||| |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||    
T  22831832 tgggggaatatttttcaacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattcttaaaa 22831924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 344 - 411
Target Start/End: Original strand, 22810467 - 22810534
Alignment:
Q  344 gaatgtttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaa 411  Q
    ||||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||| ||||||    
T  22810467 gaatgtttttcaacgtttacatattaagtgttcgatgctaaattgaatatgtgaaattaaatcatcaa 22810534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 415
Target Start/End: Original strand, 22842991 - 22843057
Alignment:
Q  349 tttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtc 415  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  22842991 tttttcaatttttacatattaagtgtttgatgctaaattgaatatgtgaaatcaaaacatctatgtc 22843057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 22810160 - 22810258
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctg---ttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagt 124  Q
    |||||||||| | |||||||| |||||||||| ||||||||||   |||  |||||||||||||||||||||| | |||||||||||||||||| |||||    
T  22810160 acatgattatagtttgtgaatgaataatgcttctgtagttctgctgttcaatgtttattatttataagatttt-ttctaagtgaagaaaaaattacaagt 22810258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 22840745 - 22840814
Alignment:
Q  184 ggttactaaagttgcatatctcatttgggtccaactaagaaatgtcttatttagtttagtaaaaatgaat 253  Q
    |||||||||| |||| | | |||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  22840745 ggttactaaatttgcctttatcatctgagtccaactaagaaatgtctcatttagtttagtaaaaatgaat 22840814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 22881124 - 22881189
Alignment:
Q  84 atttataagattttgtcctaagtgaagaaaaaattgcaagtcta-atttggatcctactaagaaat 148  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||||  ||||||||||||||    
T  22881124 atttataagattttgtcctaagtgaagaaaaaattacaagtcaacatttgtgtcctactaagaaat 22881189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 22810360 - 22810401
Alignment:
Q  212 gtccaactaagaaatgtcttatttagtttagtaaaaatgaat 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22810360 gtccaactaagaaatgtctcatttagtttagtaaaaatgaat 22810401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 22859169 - 22859262
Alignment:
Q  339 tgggagaatgtttttcaatgtttacgtattcagtgt-ttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttcttaaaa 431  Q
    |||| ||||||||||||| |||||  |||||   || ||||||| |||||||||||||||||||||||||| |||||  || ||||||||||||    
T  22859169 tgggggaatgtttttcaacgtttatatattcgaagtcttgatgcaaaattgaatatgtgaaattaaaacattaatgttgtctaatttcttaaaa 22859262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 22886327 - 22886396
Alignment:
Q  359 tttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttctta 428  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||  ||||||||  || |||||||||    
T  22886327 tttacatattaagtgtttgatgctaaattgaatatgtgaaatttaattatcaatgtgttctaatttctta 22886396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 22894460 - 22894520
Alignment:
Q  29 acatgattattggttgtgaataataatgcttgtgtagttctgttcggtgtttattatttat 89  Q
    |||||||||| | |||||||||||||||||| |  |||||||||| |||||||||||||||    
T  22894460 acatgattatagtttgtgaataataatgcttatacagttctgttcagtgtttattatttat 22894520  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 22899058 - 22899104
Alignment:
Q  370 agtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatc 418  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  22899058 agtgtttgat-ctaaattgaatatgtgaaatt-aaacatcaatgtcatc 22899104  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 22840895 - 22840950
Alignment:
Q  372 tgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttctt 427  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||  || ||||||||    
T  22840895 tgtttgatgcaaaaatgaatatatgaaattaaaacatcaatgttttctaatttctt 22840950  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 22806031 - 22806072
Alignment:
Q  212 gtccaactaagaaatgtcttatttagtttagtaaaaatgaat 253  Q
    |||| |||||||||| ||| ||||||||||||||||||||||    
T  22806031 gtcctactaagaaatatctcatttagtttagtaaaaatgaat 22806072  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 22886179 - 22886243
Alignment:
Q  178 tcaaatggttactaaagttgcatatctcatttgggtccaactaagaaatgtcttatttagtttagt 243  Q
    ||| |||||||||||| |||| | | |||| ||||||| |||||||||||||| ||||||||||||    
T  22886179 tcacatggttactaaaattgcct-tatcatctgggtcctactaagaaatgtctcatttagtttagt 22886243  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 22889808 - 22889868
Alignment:
Q  29 acatgattattggttgtgaataataatgcttgtgtagttctgttcggtgtttattatttat 89  Q
    |||||||||| |||||||||||||||||||| |  ||||| ||||  ||||| ||||||||    
T  22889808 acatgattataggttgtgaataataatgcttatacagttcggttcattgtttcttatttat 22889868  T

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Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 339 - 431
Target Start/End: Complemental strand, 21149906 - 21149814
Alignment:
Q  339 tgggagaatgtttttcaatgtttacgtattcagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcatccaatttcttaaaa 431  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  21149906 tgggtgaatgtttttcaatgtttacgtgttaagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttctaaaaa 21149814  T

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Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 21150198 - 21150098
Alignment:
Q  29 acatgattattggttgtgaat-aataatgcttgtgtagttctgttcggtgtttattatttataagattttgtcctaagtgaagaaaaaattgcaagtcta 127  Q
    |||||||||| | |||||||| || ||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  21150198 acatgattatagtttgtgaatgaacaatgcttctgtagttctgtttgatgtttattatttataagattttgtgctaagtgaaggaaaaattgcatgtcta 21150099  T
Q  128 a 128  Q
    |    
T  21150098 a 21150098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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