View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_low_168 (Length: 316)

Name: NF0928_low_168
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_low_168
NF0928_low_168
[»] chr2 (39 HSPs)
chr2 (10-194)||(44548497-44548684)
chr2 (244-295)||(16325640-16325691)
chr2 (246-301)||(22593173-22593228)
chr2 (243-301)||(10026625-10026683)
chr2 (243-301)||(10046486-10046544)
chr2 (244-301)||(12864263-12864320)
chr2 (244-301)||(25540414-25540471)
chr2 (242-301)||(28525463-28525522)
chr2 (242-301)||(38962802-38962861)
chr2 (244-295)||(39201518-39201569)
chr2 (244-295)||(41031916-41031967)
chr2 (244-301)||(3643897-3643954)
chr2 (244-301)||(6358161-6358218)
chr2 (242-295)||(35946783-35946836)
chr2 (244-300)||(20116622-20116678)
chr2 (244-295)||(7747319-7747370)
chr2 (244-291)||(18902540-18902587)
chr2 (242-301)||(38005441-38005500)
chr2 (244-301)||(331540-331597)
chr2 (244-301)||(10823099-10823156)
chr2 (244-301)||(13026421-13026478)
chr2 (244-301)||(14169619-14169676)
chr2 (244-301)||(41220674-41220731)
chr2 (244-300)||(3811701-3811757)
chr2 (251-295)||(24179613-24179657)
chr2 (242-285)||(13514048-13514091)
chr2 (244-295)||(31088379-31088430)
chr2 (244-295)||(34346297-34346348)
chr2 (244-301)||(20612544-20612602)
chr2 (242-284)||(44548732-44548774)
chr2 (244-301)||(2784971-2785028)
chr2 (244-301)||(8410170-8410227)
chr2 (244-301)||(12455349-12455406)
chr2 (244-301)||(28616389-28616446)
chr2 (244-301)||(33005790-33005847)
chr2 (244-301)||(37560212-37560269)
chr2 (244-301)||(42770661-42770718)
chr2 (244-301)||(44945632-44945689)
chr2 (253-301)||(39806904-39806952)
[»] chr5 (37 HSPs)
chr5 (244-301)||(9805044-9805101)
chr5 (244-301)||(42086367-42086424)
chr5 (244-295)||(8513565-8513616)
chr5 (242-294)||(23383704-23383756)
chr5 (242-301)||(20255409-20255468)
chr5 (244-295)||(39099789-39099840)
chr5 (244-301)||(1538471-1538528)
chr5 (244-301)||(5731930-5731987)
chr5 (244-301)||(20525878-20525935)
chr5 (244-295)||(12766177-12766228)
chr5 (254-301)||(14588637-14588684)
chr5 (253-295)||(14974343-14974385)
chr5 (247-301)||(42861231-42861285)
chr5 (244-301)||(13664300-13664357)
chr5 (244-301)||(19572764-19572821)
chr5 (244-293)||(28857194-28857243)
chr5 (242-291)||(41163468-41163517)
chr5 (249-301)||(9168268-9168320)
chr5 (244-295)||(15034121-15034172)
chr5 (244-295)||(27648435-27648486)
chr5 (244-295)||(42291515-42291566)
chr5 (257-295)||(23247374-23247412)
chr5 (244-301)||(3653924-3653981)
chr5 (242-295)||(7616966-7617019)
chr5 (244-301)||(14728123-14728180)
chr5 (249-286)||(25950609-25950646)
chr5 (244-301)||(38897729-38897786)
chr5 (244-301)||(40117455-40117512)
chr5 (244-301)||(43399168-43399225)
chr5 (244-304)||(2485233-2485293)
chr5 (245-301)||(12081948-12082004)
chr5 (244-295)||(17693350-17693402)
chr5 (245-301)||(24875385-24875441)
chr5 (244-288)||(28857002-28857046)
chr5 (245-301)||(35561829-35561885)
chr5 (244-288)||(36783296-36783340)
chr5 (244-300)||(37263281-37263337)
[»] chr4 (39 HSPs)
chr4 (244-301)||(40780871-40780928)
chr4 (244-295)||(16450350-16450401)
chr4 (244-301)||(7246656-7246713)
chr4 (244-301)||(8889066-8889123)
chr4 (244-301)||(46108735-46108792)
chr4 (242-301)||(14859335-14859394)
chr4 (244-301)||(21429345-21429402)
chr4 (244-301)||(24166494-24166551)
chr4 (244-301)||(29895831-29895888)
chr4 (244-301)||(52950126-52950183)
chr4 (245-301)||(29588780-29588836)
chr4 (245-301)||(49260676-49260732)
chr4 (242-301)||(5472856-5472915)
chr4 (244-295)||(6032653-6032704)
chr4 (244-301)||(1940787-1940844)
chr4 (244-301)||(2559351-2559408)
chr4 (244-301)||(3159479-3159536)
chr4 (244-301)||(4738662-4738719)
chr4 (244-301)||(13073582-13073639)
chr4 (244-301)||(20421817-20421874)
chr4 (242-295)||(27248476-27248529)
chr4 (244-301)||(38075477-38075534)
chr4 (244-301)||(38166071-38166128)
chr4 (244-301)||(42722587-42722644)
chr4 (245-301)||(20532420-20532476)
chr4 (243-294)||(3507321-3507372)
chr4 (254-301)||(6779255-6779302)
chr4 (244-295)||(30317283-30317334)
chr4 (244-295)||(38168306-38168357)
chr4 (244-295)||(54946299-54946350)
chr4 (251-301)||(295550-295600)
chr4 (244-301)||(43458657-43458714)
chr4 (244-301)||(53599104-53599161)
chr4 (244-301)||(55921078-55921135)
chr4 (261-301)||(1446870-1446910)
chr4 (261-301)||(8064825-8064865)
chr4 (244-292)||(13552155-13552203)
chr4 (245-301)||(14567283-14567339)
chr4 (241-301)||(26237429-26237489)
[»] chr8 (19 HSPs)
chr8 (244-292)||(3567956-3568004)
chr8 (244-301)||(4479306-4479363)
chr8 (245-301)||(14846618-14846674)
chr8 (244-301)||(10927649-10927706)
chr8 (244-301)||(15884566-15884623)
chr8 (244-301)||(18374053-18374110)
chr8 (244-300)||(24938572-24938628)
chr8 (244-300)||(43027349-43027405)
chr8 (244-295)||(8997554-8997605)
chr8 (244-295)||(9860005-9860056)
chr8 (244-301)||(3418523-3418580)
chr8 (244-297)||(26570971-26571024)
chr8 (244-301)||(45521211-45521268)
chr8 (244-301)||(6100515-6100572)
chr8 (244-301)||(8141145-8141202)
chr8 (244-301)||(11298277-11298334)
chr8 (242-295)||(24837291-24837344)
chr8 (244-301)||(43032944-43033001)
chr8 (245-293)||(3379823-3379871)
[»] chr3 (44 HSPs)
chr3 (241-304)||(45402359-45402422)
chr3 (244-301)||(29127958-29128015)
chr3 (244-301)||(33688990-33689047)
chr3 (244-301)||(47219183-47219240)
chr3 (244-301)||(49021214-49021271)
chr3 (244-301)||(3136705-3136762)
chr3 (244-301)||(29135952-29136009)
chr3 (244-301)||(47471870-47471927)
chr3 (244-301)||(48342059-48342116)
chr3 (244-301)||(54261265-54261322)
chr3 (243-295)||(30767257-30767309)
chr3 (244-295)||(28572222-28572273)
chr3 (242-301)||(41630521-41630580)
chr3 (244-301)||(3507544-3507601)
chr3 (244-301)||(29762166-29762223)
chr3 (244-301)||(35315995-35316052)
chr3 (244-301)||(40660338-40660395)
chr3 (244-301)||(49198390-49198447)
chr3 (244-301)||(51060292-51060349)
chr3 (249-301)||(928639-928691)
chr3 (244-284)||(8683251-8683291)
chr3 (244-288)||(32522031-32522075)
chr3 (244-300)||(44064584-44064640)
chr3 (244-295)||(8362622-8362673)
chr3 (244-295)||(15320231-15320282)
chr3 (244-295)||(24506659-24506710)
chr3 (244-295)||(29195330-29195381)
chr3 (244-295)||(33251707-33251758)
chr3 (250-301)||(43330749-43330800)
chr3 (244-295)||(45877499-45877550)
chr3 (242-292)||(19873420-19873470)
chr3 (244-301)||(7328883-7328939)
chr3 (244-301)||(10040595-10040652)
chr3 (244-297)||(19147004-19147057)
chr3 (244-301)||(23511606-23511663)
chr3 (244-301)||(26043851-26043908)
chr3 (244-289)||(36043685-36043730)
chr3 (244-301)||(45450458-45450515)
chr3 (244-301)||(47749116-47749173)
chr3 (242-295)||(49543564-49543617)
chr3 (244-301)||(50405614-50405671)
chr3 (244-301)||(54237487-54237544)
chr3 (244-284)||(11393486-11393526)
chr3 (255-295)||(32873571-32873611)
[»] chr1 (36 HSPs)
chr1 (245-300)||(11397901-11397956)
chr1 (242-301)||(17642013-17642072)
chr1 (244-301)||(26325852-26325909)
chr1 (244-295)||(5504077-5504128)
chr1 (244-286)||(51437512-51437554)
chr1 (244-301)||(4581693-4581750)
chr1 (244-301)||(8764031-8764088)
chr1 (244-301)||(9659190-9659247)
chr1 (244-301)||(10422828-10422885)
chr1 (244-301)||(16956506-16956563)
chr1 (244-301)||(41663867-41663924)
chr1 (245-301)||(12036756-12036812)
chr1 (244-295)||(10172982-10173033)
chr1 (244-295)||(14254279-14254330)
chr1 (244-295)||(26660184-26660234)
chr1 (244-295)||(30927738-30927789)
chr1 (242-301)||(34719816-34719875)
chr1 (244-295)||(35211183-35211234)
chr1 (242-301)||(45726442-45726501)
chr1 (244-301)||(5855562-5855619)
chr1 (244-301)||(33418126-33418183)
chr1 (268-301)||(47312934-47312967)
chr1 (244-301)||(49078154-49078211)
chr1 (244-292)||(10507747-10507795)
chr1 (257-301)||(33498863-33498907)
chr1 (255-297)||(17092499-17092541)
chr1 (244-301)||(35908798-35908853)
chr1 (245-295)||(48761222-48761272)
chr1 (244-301)||(2567316-2567373)
chr1 (244-301)||(10336556-10336613)
chr1 (244-301)||(33004026-33004083)
chr1 (244-301)||(37339860-37339917)
chr1 (244-301)||(43959832-43959889)
chr1 (244-301)||(45361893-45361950)
chr1 (245-301)||(9853289-9853345)
chr1 (244-300)||(31576558-31576614)
[»] chr7 (31 HSPs)
chr7 (244-301)||(38578877-38578934)
chr7 (244-301)||(48804725-48804782)
chr7 (244-295)||(22974015-22974066)
chr7 (244-301)||(8734696-8734753)
chr7 (244-301)||(13095900-13095957)
chr7 (244-301)||(28396170-28396227)
chr7 (244-301)||(43861982-43862039)
chr7 (245-301)||(41945515-41945571)
chr7 (250-301)||(24983435-24983486)
chr7 (244-295)||(41267934-41267985)
chr7 (244-301)||(4195212-4195269)
chr7 (244-301)||(17748392-17748449)
chr7 (250-295)||(36619270-36619315)
chr7 (244-301)||(39474982-39475039)
chr7 (244-301)||(42210272-42210329)
chr7 (244-301)||(45697200-45697257)
chr7 (244-300)||(48551900-48551956)
chr7 (244-295)||(5069825-5069876)
chr7 (242-301)||(16802165-16802224)
chr7 (242-281)||(28744224-28744263)
chr7 (244-294)||(26423298-26423347)
chr7 (244-294)||(39420886-39420936)
chr7 (244-301)||(365182-365239)
chr7 (244-301)||(3353466-3353523)
chr7 (244-293)||(10047886-10047935)
chr7 (244-301)||(18785711-18785768)
chr7 (251-300)||(19914720-19914769)
chr7 (244-301)||(27028321-27028378)
chr7 (244-301)||(48244366-48244423)
chr7 (245-301)||(3603399-3603455)
chr7 (244-292)||(9685778-9685826)
[»] chr6 (25 HSPs)
chr6 (244-301)||(13036014-13036071)
chr6 (244-292)||(34954629-34954677)
chr6 (244-295)||(6606107-6606158)
chr6 (244-295)||(14783430-14783481)
chr6 (243-301)||(29444774-29444832)
chr6 (244-301)||(5253233-5253290)
chr6 (244-301)||(8932704-8932761)
chr6 (244-301)||(8944170-8944227)
chr6 (244-301)||(9633635-9633692)
chr6 (244-301)||(21898691-21898748)
chr6 (244-301)||(31129220-31129277)
chr6 (244-301)||(32157177-32157234)
chr6 (244-295)||(19089547-19089598)
chr6 (247-301)||(11142646-11142700)
chr6 (244-301)||(3601127-3601184)
chr6 (244-301)||(30788863-30788920)
chr6 (244-295)||(8149807-8149858)
chr6 (245-292)||(9179747-9179794)
chr6 (244-295)||(13468982-13469033)
chr6 (244-290)||(8938765-8938811)
chr6 (245-295)||(14326046-14326096)
chr6 (245-295)||(14419056-14419106)
chr6 (245-295)||(17114908-17114958)
chr6 (244-285)||(13584456-13584497)
chr6 (248-301)||(29333153-29333206)
[»] scaffold0016 (1 HSPs)
scaffold0016 (242-294)||(8709-8761)
[»] scaffold0316 (1 HSPs)
scaffold0316 (244-301)||(1624-1681)
[»] scaffold0291 (1 HSPs)
scaffold0291 (244-301)||(6897-6954)
[»] scaffold0170 (1 HSPs)
scaffold0170 (244-301)||(9887-9944)
[»] scaffold0009 (2 HSPs)
scaffold0009 (244-301)||(42842-42899)
scaffold0009 (244-290)||(9495-9541)
[»] scaffold0010 (1 HSPs)
scaffold0010 (246-301)||(155723-155778)
[»] scaffold0002 (2 HSPs)
scaffold0002 (244-295)||(618-669)
scaffold0002 (244-301)||(319464-319521)
[»] scaffold0223 (1 HSPs)
scaffold0223 (244-301)||(16921-16978)
[»] scaffold0006 (1 HSPs)
scaffold0006 (244-301)||(68556-68613)
[»] scaffold0011 (1 HSPs)
scaffold0011 (244-292)||(224368-224416)
[»] scaffold0384 (1 HSPs)
scaffold0384 (244-295)||(6020-6071)
[»] scaffold0004 (2 HSPs)
scaffold0004 (244-301)||(7845-7902)
scaffold0004 (245-301)||(94991-95048)
[»] scaffold0005 (1 HSPs)
scaffold0005 (245-301)||(250036-250092)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 8e-89; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 44548497 - 44548684
Alignment:
Q  10 taaaattacttaaaagaacctgagttcgatttctgcttgaaacatgaccttacttgcctcatggcagaactctaaattatcagggctctatcccactt-- 107  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  44548497 taaaattacttaaaagaacctgagttcgatttctggttggaacatgaccttacttgcctcatggcagaactctaaattatcagggctctatcccacttaa 44548596  T
Q  108 -atcgaagggtttacaaacaaaaaataaataatggtaaagttgttttcataaatccttttaaatcatttcaaataggttattagagtt 194  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548597 aatcgaagggtttacaaacaaaaaataaataatggtaaagttgttttcataaatccttttaaatcatttcaaataggttattagagtt 44548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 16325691 - 16325640
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  16325691 gtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcat 16325640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 22593228 - 22593173
Alignment:
Q  246 ttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  22593228 ttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 22593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 10026625 - 10026683
Alignment:
Q  243 agtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  10026625 agtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 10046486 - 10046544
Alignment:
Q  243 agtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  10046486 agtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcac 10046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 12864320 - 12864263
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||    
T  12864320 gtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcac 12864263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 25540414 - 25540471
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  25540414 gtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 25540471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 28525463 - 28525522
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||  |||||||||||||||||| ||||| ||||||||||||| |||||    
T  28525463 cagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcac 28525522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 38962861 - 38962802
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||| ||||||||||||||||| |||||||| || |||||||||||||||| |||||    
T  38962861 cagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcac 38962802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 39201518 - 39201569
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  39201518 gtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcat 39201569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 41031916 - 41031967
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  41031916 gtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcat 41031967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3643897 - 3643954
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||| ||||||||||||||| ||||||||  |||||||||||||||||| |||||    
T  3643897 gtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcac 3643954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 6358161 - 6358218
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  6358161 gttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 6358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 35946836 - 35946783
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||| |||||| |||||||| ||||| |||||||||||||    
T  35946836 cagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcat 35946783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 20116622 - 20116678
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||||||| |||||||||| | |||||| ||||||||||||||||||| ||||    
T  20116622 gtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgca 20116678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 7747370 - 7747319
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||| ||||||| | |||||||| |||||||||||||||||||    
T  7747370 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcat 7747319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 18902540 - 18902587
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagag 291  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  18902540 gtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagag 18902587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 38005500 - 38005441
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||||||||||  |||||||| |||||||| |||||||||| |||||    
T  38005500 cagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 38005441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 331597 - 331540
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||| |||| |||||    
T  331597 gtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcac 331540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 10823156 - 10823099
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||||  |||||||| ||||| ||||||||||||| |||||    
T  10823156 gtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 10823099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 13026421 - 13026478
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| |||| |||||| |||| ||||||||| ||||||||||||||||||| |||||    
T  13026421 gtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcac 13026478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 14169619 - 14169676
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| ||| || |||||||| ||||||||||||||| ||| |||||    
T  14169619 gtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcac 14169676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 41220731 - 41220674
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||  ||||||||||||||||||| |||||    
T  41220731 gtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcac 41220674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 3811701 - 3811757
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    ||||| ||||||||||||||||  || ||||| ||||||||||||||||||| ||||    
T  3811701 gtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgca 3811757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 24179657 - 24179613
Alignment:
Q  251 acccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||    
T  24179657 acccaccaaagatggacgactaatccggctcatgcgtagaggcat 24179613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 13514091 - 13514048
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgc 285  Q
    |||||| ||||||||||||||| | |||||||||||||||||||    
T  13514091 cagttttcgacccaccaaaggttggtgactaatctggctcatgc 13514048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 31088430 - 31088379
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||    
T  31088430 gtttccgacccatcaatggtgggtggctaatctgactcatgcgtagaggcat 31088379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 34346297 - 34346348
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||||   || ||||||| |||||||||||||||||    
T  34346297 gtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcat 34346348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 20612544 - 20612602
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaat-ctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| ||||||| | ||||||||| ||||||||| |||||    
T  20612544 gtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcac 20612602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 44548732 - 44548774
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatg 284  Q
    |||||||||| ||| |||||||||| |||||||||||||||||    
T  44548732 cagtttccgatccatcaaaggtggacgactaatctggctcatg 44548774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 2785028 - 2784971
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| || ||| | |||| |||||||||| ||||||||||||||||| |||||    
T  2785028 gtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcac 2784971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8410227 - 8410170
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||| ||||| ||||  |||||||| ||||| ||||||||||||| |||||    
T  8410227 gtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcac 8410170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 12455406 - 12455349
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| ||||   |||||||| ||||| ||||||||||||| |||||    
T  12455406 gtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 12455349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 28616389 - 28616446
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||||||| |||| |||  |||||||||||||| ||||||||||||| |||||    
T  28616389 gtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcac 28616446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 33005847 - 33005790
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| |||||||   || ||||||| ||||||||||||||||| |||||    
T  33005847 gtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcac 33005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 37560269 - 37560212
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||| |||||||||| || ||||| ||||| ||||||||||||| |||||    
T  37560269 gttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcac 37560212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 42770661 - 42770718
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||| || ||||| ||||| |||| |||||||| |||||    
T  42770661 gttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcac 42770718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 44945689 - 44945632
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| |||| ||||||||  |||||||| ||||| ||||||||||||| |||||    
T  44945689 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 44945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 39806904 - 39806952
Alignment:
Q  253 ccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| | ||| || |||||||||| |||||    
T  39806904 ccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcac 39806952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 9805101 - 9805044
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  9805101 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 9805044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 42086424 - 42086367
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  42086424 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 42086367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 8513616 - 8513565
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  8513616 gtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcat 8513565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 23383756 - 23383704
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggca 294  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  23383756 cagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggca 23383704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 20255468 - 20255409
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||| ||||||||||||| |||||||| | ||||||||||||||||| |||||    
T  20255468 cagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcac 20255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 39099789 - 39099840
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  39099789 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcat 39099840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 1538528 - 1538471
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||||||||| |||||    
T  1538528 gtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 1538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 5731930 - 5731987
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||||||||||| ||||||||||| |||||    
T  5731930 gtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcac 5731987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 20525935 - 20525878
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  20525935 gtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 20525878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 12766228 - 12766177
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||||||||||||    
T  12766228 gtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcat 12766177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 14588637 - 14588684
Alignment:
Q  254 caccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  14588637 caccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 14588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 14974343 - 14974385
Alignment:
Q  253 ccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcat 14974385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 42861231 - 42861285
Alignment:
Q  247 tccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| |||||| || ||||| ||||||||||||||||||| |||||    
T  42861231 tccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcac 42861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 13664357 - 13664300
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| |||||||||||   || ||||||||||||||||||||||||| |||||    
T  13664357 gtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcac 13664300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 19572821 - 19572764
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||| |||| | |||||||| ||||||||||||||||||| |||||    
T  19572821 gtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 19572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 28857243 - 28857194
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggc 293  Q
    |||||||||||||||||||||   |||||||| |||||||||||||||||    
T  28857243 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggc 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 41163468 - 41163517
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagag 291  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||||||    
T  41163468 cagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagag 41163517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 9168268 - 9168320
Alignment:
Q  249 cgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||||| |||||||| |||||||||||||||| || |||||    
T  9168268 cgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcac 9168320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 15034172 - 15034121
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||| ||| ||||||||||  ||||||| |||||||||||||||||||    
T  15034172 gtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcat 15034121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 27648435 - 27648486
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||| ||||||||| |||| |||||||| ||||||| |||||||||||    
T  27648435 gtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcat 27648486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 42291515 - 42291566
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||| ||| |||||||||| |||||||| ||||| |||||||||||||    
T  42291515 gtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcat 42291566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 23247374 - 23247412
Alignment:
Q  257 caaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  23247374 caaaggtggacgactaatctggctcgtgcgtagaggcat 23247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3653924 - 3653981
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||| |||||||||||||| |||||||| | ||| ||||||||||||| |||||    
T  3653924 gttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcac 3653981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 7617019 - 7616966
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||| |||||||   |||| |||||||||| |||||||||||||||||    
T  7617019 cagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcat 7616966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 14728180 - 14728123
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| ||||||||    ||||||| ||||||||||||||||||| |||||    
T  14728180 gtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcac 14728123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 25950609 - 25950646
Alignment:
Q  249 cgacccaccaaaggtggatgactaatctggctcatgcg 286  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  25950609 cgacccaccaaaggtggacgactaatccggctcatgcg 25950646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 38897729 - 38897786
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| |||||||||||||   ||||||| ||||| ||||||||||||| |||||    
T  38897729 gtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcac 38897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 40117512 - 40117455
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||| |||||||||||| | || ||||| ||||||||||||||||||| |||||    
T  40117512 gttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 40117455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 43399225 - 43399168
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||| ||||| ||||||||  |||| ||||||||||||| |||||    
T  43399225 gtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcac 43399168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 2485293 - 2485233
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcacagg 304  Q
    |||||||||||| ||||||||   |||||||| | ||||| ||||||||||| ||||||||    
T  2485293 gtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacagg 2485233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 12082004 - 12081948
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||||||||| |||||||  ||||| |||||||| |||| |||||    
T  12082004 tttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcac 12081948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 17693350 - 17693402
Alignment:
Q  244 gtttccgacccaccaaaggt-ggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||| |||||||||| |  ||| ||||||||||||||||||||||||||||    
T  17693350 gtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcat 17693402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 24875441 - 24875385
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||| |||||||||| || ||||| ||||| ||||||||| ||| |||||    
T  24875441 tttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcac 24875385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 28857046 - 28857002
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgta 288  Q
    |||||||||||||||||||||   |||||||| ||||||||||||    
T  28857046 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgta 28857002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 35561829 - 35561885
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| ||||| ||||   ||||||||||||||||| |||||||||| |||||    
T  35561829 tttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcac 35561885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 36783340 - 36783296
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgta 288  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||    
T  36783340 gtttccaacccaccaatggtggacgactaatccggctcatgcgta 36783296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 37263337 - 37263281
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||| |||  ||||||||| |||||||| ||||| ||||||||||||| ||||    
T  37263337 gtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgca 37263281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 40780871 - 40780928
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  40780871 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 40780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 16450401 - 16450350
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  16450401 gtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcat 16450350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 7246656 - 7246713
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  7246656 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 7246713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8889123 - 8889066
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||    
T  8889123 gtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcac 8889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 46108792 - 46108735
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||    
T  46108792 gtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcac 46108735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 14859394 - 14859335
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||| ||| |||||    
T  14859394 cagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcac 14859335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 21429402 - 21429345
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||||||||||||| |||||    
T  21429402 gtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcac 21429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 24166551 - 24166494
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||| ||||||||| ||||||||||||||| ||||||||||||| |||||    
T  24166551 gtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcac 24166494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 29895888 - 29895831
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  29895888 gtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 29895831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 52950183 - 52950126
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||| ||| |||||    
T  52950183 gtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcac 52950126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 29588836 - 29588780
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||| ||||||| ||||||| ||||| ||||||||||||| |||||    
T  29588836 tttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcac 29588780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 49260676 - 49260732
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  49260676 tttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcac 49260732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 5472856 - 5472915
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  5472856 cagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 5472915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 6032653 - 6032704
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||| || |||||||| ||||||| |||||||||||    
T  6032653 gtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcat 6032704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 1940787 - 1940844
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  1940787 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 1940844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 2559408 - 2559351
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| || ||||| ||||  ||||||||||||| |||||    
T  2559408 gtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcac 2559351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3159479 - 3159536
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| ||||   |||||||||||||| ||||||||||||| |||||    
T  3159479 gtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcac 3159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 4738719 - 4738662
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||   |||||||||||||| ||| |||||    
T  4738719 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcac 4738662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 13073639 - 13073582
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||||| || |||||    
T  13073639 gtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcac 13073582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 20421874 - 20421817
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| ||| | |||| || ||||||||||||||||||||||||| |||||    
T  20421874 gtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcac 20421817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 27248529 - 27248476
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||| |||| |||||||||||  |||||||||||||| |||||||||||||    
T  27248529 cagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcat 27248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 38075534 - 38075477
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||||  | ||||  ||||||||||||||||||| |||||    
T  38075534 gtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcac 38075477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 38166128 - 38166071
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||| ||| |||||    
T  38166128 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcac 38166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 42722587 - 42722644
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||| ||||||| | |||||||| ||||||||||||||||||| |||||    
T  42722587 gttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 42722644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 20532420 - 20532476
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||| |||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcac 20532476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 3507372 - 3507321
Alignment:
Q  243 agtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggca 294  Q
    ||||||||| |||||||||||||| |||||||| ||||| || |||||||||    
T  3507372 agtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggca 3507321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 6779302 - 6779255
Alignment:
Q  254 caccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| |||||    
T  6779302 caccaaaggtggacgactaatccggctcatgcatagaggcatgcgcac 6779255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 30317334 - 30317283
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  |||||||  ||||| |||||||||||||    
T  30317334 gtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcat 30317283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 38168357 - 38168306
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||| |||||| ||||||| | |||||||| |||||||||||||||||||    
T  38168357 gtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcat 38168306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 54946350 - 54946299
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| | |||  |||||||| |||||||||||||||||||    
T  54946350 gtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcat 54946299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 295550 - 295600
Alignment:
Q  251 acccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| |||||| ||||||||||| || ||||||||||||| |||||    
T  295550 acccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcac 295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 43458714 - 43458657
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| || |||||||||| |||||||| ||||| | ||||||||||| |||||    
T  43458714 gtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcac 43458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 53599161 - 53599104
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| |||| ||||||| | || ||||| ||||||||||||||||||| |||||    
T  53599161 gtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcac 53599104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 55921135 - 55921078
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   || ||||| ||||||| ||||||||||| |||||    
T  55921135 gtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcac 55921078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 1446910 - 1446870
Alignment:
Q  261 ggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcac 1446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 8064825 - 8064865
Alignment:
Q  261 ggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  8064825 ggtggacgactaatccggctcatgcgtagaggcatgcgcac 8064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 13552203 - 13552155
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    |||||| | ||| ||| ||||||||||||||| ||||||||||||||||    
T  13552203 gtttcctatccatcaatggtggatgactaatccggctcatgcgtagagg 13552155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 14567339 - 14567283
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||| |   |||||||| ||||| ||||||||||||| |||||    
T  14567339 tttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcac 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 26237429 - 26237489
Alignment:
Q  241 tcagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||| ||| ||||||  ||||||| | |||||||||| || |||||||||    
T  26237429 tcagtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcac 26237489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 3568004 - 3567956
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3568004 gtttccgacccaccaaaggtggatgactaatttggctcatgcgtagagg 3567956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 4479306 - 4479363
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||    
T  4479306 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcac 4479363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 14846674 - 14846618
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||    
T  14846674 tttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcac 14846618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 10927706 - 10927649
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||| ||||||||||||||||||| |||||    
T  10927706 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 10927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 15884566 - 15884623
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  15884566 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 15884623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 18374110 - 18374053
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||||||||| |||| |||||||| ||||||||||||||||||| |||||    
T  18374110 gttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcac 18374053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 24938572 - 24938628
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||| ||| ||||||||||||||||||| || |||||||||||||||| ||||    
T  24938572 gtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgca 24938628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 43027405 - 43027349
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||    
T  43027405 gtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgca 43027349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 8997554 - 8997605
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||| || | ||||||||||||||||||||| ||||||    
T  8997554 gtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcat 8997605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 9860005 - 9860056
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||| ||||||| |||||| ||||||||||||||||| ||||||||||    
T  9860005 gtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcat 9860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3418523 - 3418580
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||||||| ||||||||| |||||||||| |||||||||||| |||| |||||    
T  3418523 gtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcac 3418580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 26571024 - 26570971
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatac 297  Q
    ||||||||| || |||||||||| |||||||| |||||||||||||| ||||||    
T  26571024 gtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatac 26570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 45521268 - 45521211
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| ||||||||   |||||||| ||||||||||||||||||| |||||    
T  45521268 gtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 45521211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 6100572 - 6100515
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||| ||||||| | |||||||| ||||||||||||| ||||| |||||    
T  6100572 gttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcac 6100515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8141202 - 8141145
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||||||||||| ||||| |||||||   |||||||||||||||||| |||||    
T  8141202 gtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcac 8141145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 11298277 - 11298334
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   || |||| |||||||||| ||||||||| |||||    
T  11298277 gtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcac 11298334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 24837344 - 24837291
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||| |||||||||||||| ||||||||  |||| ||| |||||||||    
T  24837344 cagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcat 24837291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 43033001 - 43032944
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||||||||||||||||  |||||||| ||||| || |||||||||| |||||    
T  43033001 gtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcac 43032944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 3379823 - 3379871
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggc 293  Q
    |||||||||||||||| ||||| |||||||| | ||||||| |||||||    
T  3379823 tttccgacccaccaaaagtggacgactaatccgactcatgcatagaggc 3379871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 45402359 - 45402422
Alignment:
Q  241 tcagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcacagg 304  Q
    |||||||||||||||| ||||||| | |||||||| ||||||||||||||||||| ||||||||    
T  45402359 tcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacagg 45402422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 29128015 - 29127958
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  29128015 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 29127958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 33689047 - 33688990
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  33689047 gtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcac 33688990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 47219240 - 47219183
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||    
T  47219240 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 47219183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 49021214 - 49021271
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  49021214 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 49021271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3136705 - 3136762
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||    
T  3136705 gtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcac 3136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 29136009 - 29135952
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  29136009 gtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcac 29135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 47471927 - 47471870
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||| |||| |||||    
T  47471927 gtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcac 47471870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 48342116 - 48342059
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||||||||| |||||    
T  48342116 gtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcac 48342059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 54261322 - 54261265
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||| ||||||||||||||||||| |||||    
T  54261322 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 54261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 30767257 - 30767309
Alignment:
Q  243 agtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||||    
T  30767257 agtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 30767309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 28572222 - 28572273
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||||    
T  28572222 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 28572273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 41630521 - 41630580
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| |||||||||||  |||||||| |||||||| |||||||||| |||||    
T  41630521 cagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 41630580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3507544 - 3507601
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   |||||||| ||||| ||||||||||||| |||||    
T  3507544 gtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcac 3507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 29762166 - 29762223
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| ||||||||  |||||||| ||||||||| |||||    
T  29762166 gtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcac 29762223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 35316052 - 35315995
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||| ||||  ||||||||  |||||||||||||||||| |||||    
T  35316052 gtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcac 35315995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 40660338 - 40660395
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||| |||| ||||| || |||||||||||||||| |||||    
T  40660338 gttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcac 40660395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 49198447 - 49198390
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| || ||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  49198447 gtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 49198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 51060292 - 51060349
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| ||||||||  | |||||||||||||||| |||||    
T  51060292 gtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcac 51060349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 928691 - 928639
Alignment:
Q  249 cgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||||||| ||||| ||||||| ||||| |||||    
T  928691 cgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcac 928639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 8683251 - 8683291
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatg 284  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  8683251 gtttccgacccaccaaaggtggacgactaatccggctcatg 8683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 32522075 - 32522031
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgta 288  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||    
T  32522075 gtttccgacccatcaaaggtggacgactaatctgactcatgcgta 32522031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 44064640 - 44064584
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||||||||||||||||   |||||||| || |||||||||||||||| ||||    
T  44064640 gtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgcgca 44064584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 8362673 - 8362622
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||| || |||| ||||||||| ||||||| ||||||||||||||||||||    
T  8362673 gtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcat 8362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 15320282 - 15320231
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||| ||||||||||||||||  |||||||| ||||| |||||||||||||    
T  15320282 gtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcat 15320231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 24506659 - 24506710
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| ||||   |||||||||| |||||||||||||||||    
T  24506659 gtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcat 24506710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 29195330 - 29195381
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||| |||||| ||||||||| ||||||||||| ||||| ||||||||||    
T  29195330 gtttccaacccactaaaggtggacgactaatctggttcatgtgtagaggcat 29195381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 33251758 - 33251707
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||| ||||||| |||| ||||| |||||||| |||||||||||||||||||    
T  33251758 gttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcat 33251707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 43330749 - 43330800
Alignment:
Q  250 gacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  43330749 gacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43330800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 45877550 - 45877499
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||| ||| |||| | |||||||| |||||||||||||||||||    
T  45877550 gtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcat 45877499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 19873470 - 19873420
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    ||||||||||||||| |||| |||| |||||||| ||||| ||||||||||    
T  19873470 cagtttccgacccacaaaagatggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 7328939 - 7328883
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||  |||||||| |||||||||||| |||||| |||||    
T  7328939 gttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcac 7328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 10040652 - 10040595
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||||||| ||| | || ||||| ||||||||||||| |||||    
T  10040652 gtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcac 10040595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 19147057 - 19147004
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatac 297  Q
    ||||||||||||||||||||||| ||||||||  |||| ||| |||||| ||||    
T  19147057 gtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatac 19147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 23511663 - 23511606
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||| |||||||||| || ||||| | ||||||||||||||||| |||||    
T  23511663 gttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcac 23511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 26043908 - 26043851
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||| |||||||||||   |||||||| ||||||||||||||||||| |||||    
T  26043908 gtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 26043851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 36043685 - 36043730
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtag 289  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||    
T  36043685 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 45450458 - 45450515
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| || || |||||||||| ||||||||| ||| |||||||||||||| |||||    
T  45450458 gtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcac 45450515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 47749116 - 47749173
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||||||||  |||||||  ||||| ||||||||||||| |||||    
T  47749116 gtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcac 47749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 49543617 - 49543564
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||| ||||||||  |||||||  ||||| |||||||||||||    
T  49543617 cagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcat 49543564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 50405614 - 50405671
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||  |||||||| | ||| ||||||||||||| |||||    
T  50405614 gtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcac 50405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 54237544 - 54237487
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| || |||||| |||| ||| ||||||||||||||| ||| |||||    
T  54237544 gtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcac 54237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 11393486 - 11393526
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatg 284  Q
    |||||||||| | |||||||||| |||||||||||||||||    
T  11393486 gtttccgaccaatcaaaggtggacgactaatctggctcatg 11393526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 32873571 - 32873611
Alignment:
Q  255 accaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||  |||||||||||||||| |||||||||||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcat 32873611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 11397901 - 11397956
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  11397901 tttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgca 11397956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 17642013 - 17642072
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  17642013 cagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 26325909 - 26325852
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  26325909 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 26325852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 5504128 - 5504077
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  5504128 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcat 5504077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 51437554 - 51437512
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcg 286  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  51437554 gtttccgacccaccaaaggtggatgactaatccggctcatgcg 51437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 4581693 - 4581750
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| ||||| || ||||| ||||||||||||| |||||    
T  4581693 gtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcac 4581750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8764088 - 8764031
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||||||| |||||    
T  8764088 gtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcac 8764031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 9659190 - 9659247
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||||||| |||||||| |||||||||||| |||||| |||||    
T  9659190 gtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcac 9659247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 10422885 - 10422828
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||| |||||    
T  10422885 gtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 10422828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 16956563 - 16956506
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||  ||||||||| ||||| ||||||||||||| |||||    
T  16956563 gtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcac 16956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 41663867 - 41663924
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| ||||||||  |||||||||||||||||| |||||    
T  41663867 gtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcac 41663924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 12036756 - 12036812
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||| |||||||||||||| || ||||||||||| ||||||||||||| |||||    
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcac 12036812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 10172982 - 10173033
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  10172982 gtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcat 10173033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 14254279 - 14254330
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||| |||||||||| |||||||| |||||||||||| ||||||    
T  14254279 gtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcat 14254330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 26660234 - 26660184
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  26660234 gtttccgacccaccaaaggtggc-gactaatccggctcatgcgtagaggcat 26660184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 30927738 - 30927789
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||    
T  30927738 gtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcat 30927789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 34719875 - 34719816
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||||   |||||||||| ||| ||||||||||||| |||||    
T  34719875 cagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcac 34719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 35211183 - 35211234
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||| |||||||   ||||||||||||||||||    
T  35211183 gtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcat 35211234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 45726442 - 45726501
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||| |||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  45726442 cagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcac 45726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 5855619 - 5855562
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||| | ||||||||||||||||| |||||    
T  5855619 gtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcac 5855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 33418126 - 33418183
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||||||||| |||||||| ||||| ||| ||||||||| |||||    
T  33418126 gtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcac 33418183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 301
Target Start/End: Original strand, 47312934 - 47312967
Alignment:
Q  268 gactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||||||||||||||    
T  47312934 gactaatctggctcatgcgtagaggcatacgcac 47312967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 49078211 - 49078154
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| ||||| |||| | |||||||| ||||||||||||||||||| |||||    
T  49078211 gtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcac 49078154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 10507795 - 10507747
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    |||||||||||||||  |||||| |||||||| ||||||||||||||||    
T  10507795 gtttccgacccaccagtggtggacgactaatccggctcatgcgtagagg 10507747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 33498863 - 33498907
Alignment:
Q  257 caaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||    
T  33498863 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcac 33498907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 17092499 - 17092541
Alignment:
Q  255 accaaaggtggatgactaatctggctcatgcgtagaggcatac 297  Q
    |||||||||||| |||||||| ||||| |||||||||||||||    
T  17092499 accaaaggtggacgactaatccggctcgtgcgtagaggcatac 17092541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 35908853 - 35908798
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||  | |||||| |||||||| ||||||||||||||||||| |||||    
T  35908853 gtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcac 35908798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 48761272 - 48761222
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||| |||||||||||| ||||||||  |||| |||||||||||||    
T  48761272 tttccgaccgaccaaaggtggacgactaatccagctcgtgcgtagaggcat 48761222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 2567373 - 2567316
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||| |||| | |||||||| ||| || |||||||||| |||||    
T  2567373 gtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcac 2567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 10336613 - 10336556
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||| ||| |||||||||| || ||||| ||||||||||||||||||| |||||    
T  10336613 gttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcac 10336556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 33004026 - 33004083
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||||||  ||||| ||||||||| ||||| ||||||||||||| |||||    
T  33004026 gttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcac 33004083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 37339917 - 37339860
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||||||  |||||||| ||||| ||||| ||||||| |||||    
T  37339917 gtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcac 37339860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 43959832 - 43959889
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| |||| ||||||||  |||||||| ||||| ||||||||||||| |||||    
T  43959832 gtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 43959889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 45361893 - 45361950
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||| |||| |||||||| ||||| |||||    
T  45361893 gtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcac 45361950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 9853289 - 9853345
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||||||||||||| || |||||||| || || |||||||||| |||||    
T  9853289 tttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcac 9853345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 31576558 - 31576614
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    ||||||||| || ||||| |||| |||||| | |||||||||||||||||| |||||    
T  31576558 gtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgca 31576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 38578877 - 38578934
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  38578877 gtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcac 38578934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 48804782 - 48804725
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  48804782 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 48804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 22974066 - 22974015
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22974066 gtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcat 22974015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 8734696 - 8734753
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||||||||| ||||| ||||||| |||||    
T  8734696 gtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcac 8734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 13095957 - 13095900
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   |||||||| ||||||||||||||||||| |||||    
T  13095957 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 13095900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 28396170 - 28396227
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||| || |||||||| |||||||||||| |||||| |||||    
T  28396170 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcac 28396227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 43861982 - 43862039
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||| |||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  43861982 gttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcac 43862039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 41945571 - 41945515
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  41945571 tttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 41945515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 24983435 - 24983486
Alignment:
Q  250 gacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||| |||||    
T  24983435 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcac 24983486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 41267934 - 41267985
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||| |||||||||| |||||||||  |||||||||||||||||    
T  41267934 gtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcat 41267985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 4195212 - 4195269
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||| |||||| | |||||| ||||||||||||||||||| |||||    
T  4195212 gtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcac 4195269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 17748392 - 17748449
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| |||||||||| |||||||| ||||| | ||||||||||| |||||    
T  17748392 gtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcac 17748449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 36619270 - 36619315
Alignment:
Q  250 gacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||    
T  36619270 gacccaccaatggtggacgactaatccggctcatgcgtagaggcat 36619315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 39475039 - 39474982
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||||||| || |||||    
T  39475039 gttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcac 39474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 42210272 - 42210329
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| ||||| ||| ||||| ||||| ||||||||||||| |||||    
T  42210272 gtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcac 42210329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 45697200 - 45697257
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||| |   ||||||||||||||||| |||||    
T  45697200 gtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcac 45697257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 48551956 - 48551900
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    |||||||| ||| |||||||||| |||||||| ||||||| ||||||||||| ||||    
T  48551956 gtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgca 48551900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 5069825 - 5069876
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||||||||  |||||||| ||||  |||||||||||||    
T  5069825 gtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcat 5069876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 16802224 - 16802165
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||||| ||||   |||||||| ||||| |||||||||||||||||||    
T  16802224 cagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcac 16802165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 281
Target Start/End: Complemental strand, 28744263 - 28744224
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctc 281  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  28744263 cagtttccgacccaccaaaggtggacgactaatccggctc 28744224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 26423298 - 26423347
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggca 294  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||||    
T  26423298 gtttccgacc-accaaaggtgaacgactaatctggctcgtgcgtagaggca 26423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 39420936 - 39420886
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggca 294  Q
    ||||||| |||| ||||||| || |||||||| ||||||||||||||||||    
T  39420936 gtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggca 39420886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 365239 - 365182
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||||||||||  ||||| | ||||||| ||||||||||||||||||| |||||    
T  365239 gttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcac 365182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 3353523 - 3353466
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| || ||| |||||||||| |||||||| ||||| ||||||||||||| |||||    
T  3353523 gtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 3353466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 10047886 - 10047935
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggc 293  Q
    |||||||||||||||| |||||| |||||||   ||||||||||||||||    
T  10047886 gtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggc 10047935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 18785768 - 18785711
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||| ||||| | ||||||||  | |||||||||||||||| |||||    
T  18785768 gtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcac 18785711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 19914720 - 19914769
Alignment:
Q  251 acccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgca 300  Q
    ||||| |||||||||  || ||||||||||||||||||||||||| ||||    
T  19914720 acccatcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgca 19914769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 27028378 - 27028321
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   ||||||||  ||||||| |||||||||| |||||    
T  27028378 gtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcac 27028321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 48244366 - 48244423
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| ||| ||||||||||||   |||||||| |||||||||||||||||| ||||||    
T  48244366 gttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcac 48244423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 3603455 - 3603399
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| ||| | || ||||| ||||| ||||||||||||| |||||    
T  3603455 tttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcac 3603399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 9685826 - 9685778
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    |||||| | ||| ||| ||||||||||||||| ||||||||||||||||    
T  9685826 gtttcctatccatcaatggtggatgactaatccggctcatgcgtagagg 9685778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 13036014 - 13036071
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  13036014 gtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcac 13036071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 34954629 - 34954677
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  34954629 gtttccgacccatcaaaggtggacgactaatctggctcatgcgtagagg 34954677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 6606107 - 6606158
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  6606107 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcat 6606158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 14783430 - 14783481
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  14783430 gtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcat 14783481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 29444774 - 29444832
Alignment:
Q  243 agtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||| ||||  ||||||| ||||||||||||||||||| |||||    
T  29444774 agtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcac 29444832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 5253233 - 5253290
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  || ||||| ||||||||||||||||||| |||||    
T  5253233 gtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcac 5253290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8932761 - 8932704
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  8932761 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcac 8932704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 8944227 - 8944170
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| |||||    
T  8944227 gtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcac 8944170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 9633635 - 9633692
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  9633635 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 9633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 21898748 - 21898691
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||| ||||||| | |||||||| ||||||||||||||||||| |||||    
T  21898748 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcac 21898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 31129277 - 31129220
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||| ||||||||||| |  ||||||||||||||||||||||||||| |||||    
T  31129277 gtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcac 31129220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 32157177 - 32157234
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||| || |||||    
T  32157177 gtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcac 32157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 19089598 - 19089547
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||| || |||||||| ||||| |||||||||||||    
T  19089598 gtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcat 19089547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 11142700 - 11142646
Alignment:
Q  247 tccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||| ||||  ||||||||| ||||||||||||||||| |||||    
T  11142700 tccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcac 11142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 3601184 - 3601127
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||| |||||||| ||||| || ||| |||||| |||||    
T  3601184 gtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcac 3601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 30788863 - 30788920
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| ||||| ||| ||||||||| |||||    
T  30788863 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcac 30788920  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 8149807 - 8149858
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||| |||||||||||||||| |||||||  |||| ||||||||||||||    
T  8149807 gtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcat 8149858  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 9179747 - 9179794
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    ||||||| |||||||||||||| ||||||||  |||||||||||||||    
T  9179747 tttccgatccaccaaaggtggacgactaatccagctcatgcgtagagg 9179794  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 13469033 - 13468982
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||| ||||||||| |||||  |||||||||||||| |||||||||||||    
T  13469033 gtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcat 13468982  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 8938811 - 8938765
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtaga 290  Q
    |||||||||||| |||||||||| |||||||  ||||||||||||||    
T  8938811 gtttccgacccatcaaaggtggacgactaattcggctcatgcgtaga 8938765  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 14326096 - 14326046
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||| ||   |||||||| |||||||||||||||||||    
T  14326096 tttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcat 14326046  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 14419106 - 14419056
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||||||||||| ||   |||||||| |||||||||||||||||||    
T  14419106 tttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcat 14419056  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 17114908 - 17114958
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    ||||||||| | |||||||||  |||||||| |||||||||||||||||||    
T  17114908 tttccgacctatcaaaggtgggcgactaatccggctcatgcgtagaggcat 17114958  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 13584456 - 13584497
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgc 285  Q
    ||||||||||||||||||||||| || ||||| |||||||||    
T  13584456 gtttccgacccaccaaaggtggacgattaatccggctcatgc 13584497  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 29333153 - 29333206
Alignment:
Q  248 ccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| |||||||||||| |||| ||  ||||||||||||||||||| |||||    
T  29333153 ccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcac 29333206  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 8709 - 8761
Alignment:
Q  242 cagtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggca 294  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  8709 cagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggca 8761  T

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Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 1624 - 1681
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||  ||||||| |||||||||||||||||||| |||||    
T  1624 gttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcac 1681  T

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Target: scaffold0291 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 6954 - 6897
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||||||   |||||||| ||||||||||||||||||| |||||    
T  6954 gtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcac 6897  T

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Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 9944 - 9887
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||| |||||    
T  9944 gtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcac 9887  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 42842 - 42899
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||||  |||||||| |||||||| |||||||||| |||||    
T  42842 gtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcac 42899  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 9541 - 9495
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtaga 290  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  9541 gtttctgacccaccaaaggtggacgactaatttggctcatgcgtaga 9495  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 155723 - 155778
Alignment:
Q  246 ttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  155723 ttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 155778  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 669 - 618
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  669 gtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcat 618  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 319521 - 319464
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    ||||||| ||||||||||||||| ||||||||  |||||||| |||||| || |||||    
T  319521 gtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcac 319464  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 16978 - 16921
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||| ||||||||||||||   |||||||||||||| ||||||||| |||||||||    
T  16978 gtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcac 16921  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 68613 - 68556
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||||||||||| |||||    
T  68613 gttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac 68556  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 224416 - 224368
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagagg 292  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||||||    
T  224416 gtttccgacccaccaaagatggacgactaatccggctcgtgcgtagagg 224368  T

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Target: scaffold0384 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 6071 - 6020
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcat 295  Q
    |||||||||||||||| |||||| |||||||  | |||||||||||||||||    
T  6071 gtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcat 6020  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 7845 - 7902
Alignment:
Q  244 gtttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||| |||||||||||||  ||||||||  ||| |||||||||||||| |||||    
T  7845 gtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcac 7902  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 94991 - 95048
Alignment:
Q  245 tttccgacccaccaaa-ggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||| |||||  |||||||| |||||||||||| |||||| |||||    
T  94991 tttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcac 95048  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 250036 - 250092
Alignment:
Q  245 tttccgacccaccaaaggtggatgactaatctggctcatgcgtagaggcatacgcac 301  Q
    |||||||||||||||||| |   |||||||| ||||| ||||||||||||| |||||    
T  250036 tttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcac 250092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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