View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0928_low_190 (Length: 290)
Name: NF0928_low_190
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0928_low_190 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 25706316 - 25706075
Alignment:
Q |
31 |
catgaggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgattagagaagataattaattatacttt |
130 |
Q |
|
|
|||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| |||||||| | |||||| |
|
|
T |
25706316 |
catgaggtgtcttgtttttccgaattacaagatttagcaacaaaaagacttaaaacacctatggagttgcatcattagaaaagataatca----tacttt |
25706221 |
T |
 |
Q |
131 |
caaccacgttcaattccaagacacatgcatgtatatcctaaattcagtggggttggtgaagacattctacacacttcaatcattatgtaattgtaccttg |
230 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||| ||||| |
|
|
T |
25706220 |
caaccacgttcaattccaagacacatgcatgtatatcctaaattcagtgaggttggtcaagacattctacatacttcagtcattatgtaattgtgccttg |
25706121 |
T |
 |
Q |
231 |
ctatgtatttgaagcaattataaacggtcattcaaaatcagtatta |
276 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
25706120 |
ctatgtatttgaagcaattataaacggtcattcaaagtcagtatta |
25706075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 2351152 - 2351083
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatta |
107 |
Q |
|
|
|||||| |||| |||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||||| |
|
|
T |
2351152 |
tgtcttctttttctgaattacacgatttatcaataaaaagacttaagacacctataaagtcgcatgatta |
2351083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 21471541 - 21471412
Alignment:
Q |
125 |
tactttcaaccacgttcaattccaagacacatgcatgtatatcctaaattcagtggggttggtgaagacattctacacacttcaatcattatgtaattgt |
224 |
Q |
|
|
||||||||||||||| ||||||||||| ||||| |||| | |||||||| || ||||| |||| ||| |||| || ||| || || | |||| ||||| |
|
|
T |
21471541 |
tactttcaaccacgtacaattccaagatacatgtatgtgtctcctaaatccaatggggctggtcaaggcatttgccatactccagtcgtcatgtgattgt |
21471442 |
T |
 |
Q |
225 |
accttgctatgtatttgaagcaattataaa |
254 |
Q |
|
|
||||||||||| ||||||||||| |||| |
|
|
T |
21471441 |
accttgctatgagattgaagcaattctaaa |
21471412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 24596963 - 24597031
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||||| || ||||| ||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
24596963 |
tgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaacacctacggagttgcatgatt |
24597031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 5214035 - 5214073
Alignment:
Q |
42 |
ttgttttgctgaattacaagatttatcaacaaaaagact |
80 |
Q |
|
|
|||||||||||||||||| |||||||||| ||||||||| |
|
|
T |
5214035 |
ttgttttgctgaattacatgatttatcaataaaaagact |
5214073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 5312752 - 5312810
Alignment:
Q |
45 |
ttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatg |
103 |
Q |
|
|
|||||| || ||||| ||||||||| ||||||||| ||||||||||| |||||||||| |
|
|
T |
5312752 |
ttttgccgatttacatgatttatcactaaaaagactcaaaacacctatggagttgcatg |
5312810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 8308991 - 8309059
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||||||||||||| ||||| ||||| | | ||||||||| |||||| ||| ||||||||||||| |
|
|
T |
8308991 |
tgtcttgttttgctgatttacatgatttcttactaaaaagactcaaaacatgtatggagttgcatgatt |
8309059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 41505859 - 41506017
Alignment:
Q |
119 |
taattatactttcaaccacgttcaattccaagacacatgcatgtatatcctaaattcagtggggttggtgaagacattctacacacttcaatcattatgt |
218 |
Q |
|
|
||||||| ||| ||||||| || |||||||| ||||| | |||||| ||||||| ||||||||| |||| ||| |||| | || || ||| || | |||| |
|
|
T |
41505859 |
taattatgcttccaaccacatttaattccaaaacacacgtatgtatctcctaaagtcagtggggatggttaaggcatt-tgcagacatcagtcgtaatgt |
41505957 |
T |
 |
Q |
219 |
aattgtaccttgctatgtatttgaagcaattataaacggtcattcaaaatcagtattatc |
278 |
Q |
|
|
||||||| |||||||| ||||||||||||| ||||| ||||| ||| |||| |||||| |
|
|
T |
41505958 |
aattgtattttgctatgaatttgaagcaattttaaacattcatttaaagtcagcattatc |
41506017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 16052648 - 16052772
Alignment:
Q |
125 |
tactttcaaccacgttcaattccaagacacatgcatgtatatcctaaattcagtggggttggtgaagacattctacacacttcaatcattatgtaattgt |
224 |
Q |
|
|
||||||||||||| | ||||||||||| || | ||||| ||||||| |||||||||||| ||| |||| |||||||||||| | |||| ||||| |
|
|
T |
16052648 |
tactttcaaccacatacaattccaagatacgcgtatgtacctcctaaagctagtggggttggtcaaggcatttgccacacttcaatcgtcatgtgattgt |
16052747 |
T |
 |
Q |
225 |
accttgctatgtatttgaagcaatt |
249 |
Q |
|
|
||||||||||| ||||||||||| |
|
|
T |
16052748 |
accttgctatgagattgaagcaatt |
16052772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 14424772 - 14424840
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||||| || ||||| ||||| ||| ||||| || |||||||||||| ||||||||||||| |
|
|
T |
14424772 |
tgtcttgttttgccgatttacatgatttctcactaaaaaaacctaaaacacctatggagttgcatgatt |
14424840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 28260249 - 28260317
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||||| |||| ||||||| |
|
|
T |
28260249 |
tgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatt |
28260317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 28074668 - 28074600
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||||| | ||||| ||||| ||| ||||||||| |||||||||| ||||||||||||| |
|
|
T |
28074668 |
tgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacctatggagttgcatgatt |
28074600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 31436634 - 31436566
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||||||||| ||| ||||| ||||| ||| ||||||| | ||||||||||| |||||||||||| |
|
|
T |
31436634 |
tgtcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatt |
31436566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 31859858 - 31859928
Alignment:
Q |
36 |
ggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||||| |||||||||||| |
|
|
T |
31859858 |
ggtgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatgcagttgcatgatt |
31859928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 20044340 - 20044264
Alignment:
Q |
31 |
catgaggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatta |
107 |
Q |
|
|
|||| ||||||||| ||| |||||||||| ||||| |||| ||||||||| |||| || ||| |||||||||||||| |
|
|
T |
20044340 |
catgtggtgtcttgctttactgaattacatgatttttcaataaaaagactcaaaatacatatggagttgcatgatta |
20044264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 16442217 - 16442286
Alignment:
Q |
37 |
gtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||| |||||| | |||||||| ||||||||| ||||||| | ||||||| ||| ||||||||||||| |
|
|
T |
16442217 |
gtgtcatgttttaccgaattacatgatttatcattaaaaagagtcaaaacacttatggagttgcatgatt |
16442286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 30625007 - 30624951
Alignment:
Q |
52 |
gaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgattag |
108 |
Q |
|
|
|||||||| ||||| |||| ||||||||| ||||||||||| | |||||||||||| |
|
|
T |
30625007 |
gaattacatgatttttcaataaaaagactcaaaacacctatgaaattgcatgattag |
30624951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 13835748 - 13835688
Alignment:
Q |
46 |
tttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||| ||||||||||||||||||| ||||||||||||||||| ||| || ||||||||| |
|
|
T |
13835748 |
tttgccgaattacaagatttatcaataaaaagacttaaaacacatatggaactgcatgatt |
13835688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 8322645 - 8322597
Alignment:
Q |
222 |
tgtaccttgctatgtatttgaagcaattataaacggtcattcaaaatca |
270 |
Q |
|
|
|||||||||||||| ||||||| ||||| ||||||| |||||||||||| |
|
|
T |
8322645 |
tgtaccttgctatgaatttgaaacaattctaaacggacattcaaaatca |
8322597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 9943109 - 9943177
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||| | || ||||| ||||| |||| ||||| ||| ||||||||||| ||||||||||||| |
|
|
T |
9943109 |
tgtcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatt |
9943177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 13830784 - 13830862
Alignment:
Q |
31 |
catgaggtgtcttgttttgctgaattacaaga---tttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||| ||||||||| ||||| |||||||||| |||||||||||||||||| ||| ||||||| || ||||||||| |
|
|
T |
13830784 |
catgtggtgtcttggtttgccaaattacaagaatatttatcaacaaaaagactcaaatcacctatggaactgcatgatt |
13830862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 13831253 - 13831309
Alignment:
Q |
220 |
attgtaccttgctatgtatttgaagcaattataaacggtcattcaaaatcagtatta |
276 |
Q |
|
|
||||||||| | | || |||||||||||||||||||| ||||||||| ||| ||||| |
|
|
T |
13831253 |
attgtacctggttttgaatttgaagcaattataaacgttcattcaaagtcaatatta |
13831309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 21813644 - 21813565
Alignment:
Q |
36 |
ggtgtcttgttttgctgaattacaagatttatcaa-caaaaagacttaaaacacctattgagttgcatgattagagaaga |
114 |
Q |
|
|
|||||||||||||||||||||||| | |||||||| ||||||||| |||| |||||| |||||||||| ||| ||||| |
|
|
T |
21813644 |
ggtgtcttgttttgctgaattacatggtttatcaataaaaaagactcaaaatacctatgtagttgcatgactagggaaga |
21813565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 26387804 - 26387872
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||||||| ||||| ||||| ||||| ||| ||||||||| |||||| |||| ||||||||||||| |
|
|
T |
26387804 |
tgtcttgtttagctgatttacatgatttctcattaaaaagactcaaaacatctatggagttgcatgatt |
26387872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29769472 - 29769414
Alignment:
Q |
124 |
atactttcaaccacgttcaattccaagacacatgcatgtatatcctaaattcagtgggg |
182 |
Q |
|
|
||||||||||| || ||||||||||| ||||||| |||||| ||||||| ||||||||| |
|
|
T |
29769472 |
atactttcaactacattcaattccaaaacacatgtatgtatctcctaaaatcagtgggg |
29769414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 32703887 - 32703970
Alignment:
Q |
31 |
catgaggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgattagagaaga |
114 |
Q |
|
|
|||||| ||||||||||||| |||||||| ||||||||| ||||||| | ||||||| ||| ||||| || |||||||||| |
|
|
T |
32703887 |
catgagatgtcttgttttgcggaattacataatttatcaataaaaagattcaaaacacttatgaagttgtatagttagagaaga |
32703970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 18236262 - 18236330
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||||| || ||||| ||||| ||| ||||||||| |||| || ||| ||||||||||||| |
|
|
T |
18236262 |
tgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgatt |
18236330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 19541192 - 19541124
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||||| |||||| || ||||| ||||| ||| | ||||||| ||||||||||| ||||||||||||| |
|
|
T |
19541192 |
tgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacctatggagttgcatgatt |
19541124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 31450115 - 31450043
Alignment:
Q |
35 |
aggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatta |
107 |
Q |
|
|
||||||||| ||||| |||| ||| |||||||||| ||||| ||| ||||||||||| |||||||| |||| |
|
|
T |
31450115 |
aggtgtctttctttgccgaatcacatgatttatcaataaaaatactcaaaacacctataaagttgcataatta |
31450043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 13807711 - 13807782
Alignment:
Q |
37 |
gtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgattag |
108 |
Q |
|
|
|||||||| |||||||||||||| | ||| |||| |||||||| |||||| |||| |||||||||||||| |
|
|
T |
13807711 |
gtgtcttgctttgctgaattacatcacttaacaactaaaagactcaaaacaactatgaagttgcatgattag |
13807782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 15416926 - 15417001
Alignment:
Q |
31 |
catgaggtgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
|||| ||||||||| ||||| |||||||| ||||| | | ||||||||| ||||||||||| |||||||||||| |
|
|
T |
15416926 |
catgtggtgtcttgctttgccgaattacatgatttgactataaaaagactcaaaacacctatacagttgcatgatt |
15417001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 26070629 - 26070561
Alignment:
Q |
38 |
tgtcttgttttgctgaattacaagatttatcaacaaaaagacttaaaacacctattgagttgcatgatt |
106 |
Q |
|
|
||||||||||||| | ||||| ||||| ||| ||||||||| ||||||| ||| ||||||||||||| |
|
|
T |
26070629 |
tgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatggagttgcatgatt |
26070561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 1291 times since January 2019
Visitors: 6712