View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0928_low_229 (Length: 255)
Name: NF0928_low_229
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0928_low_229 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 30 - 244
Target Start/End: Complemental strand, 7912431 - 7912217
Alignment:
| Q |
30 |
ttgactataatacatcttgcaacttttttcttgctaccaataaagcgccttgaaataactaatgcaattctttacgaaaatttgtcttctaactaacatg |
129 |
Q |
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| T |
7912431 |
ttgattataatacatcttgcaacttttttcttgctaccaataaagcgccttgaaataactaatgcaattctttacgaaaatttgtcttctaactaacatg |
7912332 |
T |
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| Q |
130 |
gaaacagccaaaagaagtcaaaatgaaacatgatagagtttggtctacagatatcttatccaaaactaatgtaaacaatctaaagccactaatttagaac |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7912331 |
gaaacagccaaaagaagtcaaaatgaaacatgatagagtttggtctacagatatcttatccaaaactaatgtaaacaatctaaagccactaatttagaac |
7912232 |
T |
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| Q |
230 |
atctctttccttcat |
244 |
Q |
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||||||||||||||| |
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| T |
7912231 |
atctctttccttcat |
7912217 |
T |
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