View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_low_29 (Length: 557)

Name: NF0928_low_29
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_low_29
NF0928_low_29
[»] chr4 (35 HSPs)
chr4 (217-368)||(8528917-8529069)
chr4 (230-367)||(40636868-40637006)
chr4 (229-367)||(18586616-18586755)
chr4 (230-369)||(16488999-16489139)
chr4 (230-367)||(31300074-31300212)
chr4 (252-367)||(15311994-15312110)
chr4 (252-367)||(15316630-15316746)
chr4 (229-367)||(11853202-11853341)
chr4 (252-363)||(15830817-15830929)
chr4 (217-368)||(8631811-8631963)
chr4 (250-367)||(4884531-4884649)
chr4 (283-367)||(6764654-6764739)
chr4 (221-367)||(16689326-16689472)
chr4 (102-159)||(4556325-4556382)
chr4 (102-159)||(15831000-15831057)
chr4 (102-159)||(16689206-16689263)
chr4 (217-367)||(4556440-4556585)
chr4 (102-156)||(4884736-4884790)
chr4 (102-159)||(15316817-15316874)
chr4 (102-159)||(18586825-18586882)
chr4 (217-367)||(47868195-47868346)
chr4 (283-365)||(2485308-2485390)
chr4 (102-159)||(31300283-31300340)
chr4 (282-367)||(25699401-25699487)
chr4 (114-159)||(4569954-4569999)
chr4 (102-159)||(8529126-8529183)
chr4 (102-159)||(16489209-16489265)
chr4 (316-367)||(26086240-26086292)
chr4 (104-159)||(25699609-25699663)
chr4 (288-367)||(7050722-7050802)
chr4 (102-153)||(16638692-16638742)
chr4 (102-159)||(11853410-11853467)
chr4 (104-159)||(7050499-7050551)
chr4 (443-514)||(32840970-32841041)
chr4 (130-159)||(36769306-36769335)
[»] chr7 (37 HSPs)
chr7 (230-368)||(44512919-44513058)
chr7 (252-367)||(7464913-7465029)
chr7 (252-367)||(30246642-30246758)
chr7 (230-368)||(25351004-25351143)
chr7 (230-368)||(25356698-25356837)
chr7 (252-368)||(34547257-34547374)
chr7 (252-367)||(8378833-8378949)
chr7 (229-361)||(3320440-3320573)
chr7 (229-367)||(7069433-7069572)
chr7 (229-367)||(7074440-7074579)
chr7 (229-367)||(25405046-25405185)
chr7 (252-361)||(25409809-25409919)
chr7 (229-361)||(3325188-3325321)
chr7 (217-365)||(40946076-40946225)
chr7 (102-159)||(30246829-30246886)
chr7 (102-159)||(34547129-34547186)
chr7 (102-159)||(44512791-44512848)
chr7 (102-159)||(25409990-25410046)
chr7 (104-159)||(7464786-7464841)
chr7 (102-159)||(25351213-25351269)
chr7 (102-159)||(25356907-25356963)
chr7 (282-367)||(44144352-44144438)
chr7 (322-368)||(48457440-48457487)
chr7 (102-159)||(44011017-44011073)
chr7 (102-159)||(44016928-44016984)
chr7 (114-159)||(44144143-44144188)
chr7 (101-146)||(3320313-3320359)
chr7 (101-146)||(3325061-3325107)
chr7 (102-159)||(7069641-7069698)
chr7 (102-159)||(7074648-7074705)
chr7 (102-159)||(8378770-8378827)
chr7 (102-159)||(25405254-25405311)
chr7 (335-368)||(2120591-2120624)
chr7 (102-146)||(15541259-15541304)
chr7 (102-158)||(42006524-42006579)
chr7 (277-313)||(2120626-2120662)
chr7 (320-367)||(3878322-3878370)
[»] chr6 (44 HSPs)
chr6 (230-367)||(17695244-17695382)
chr6 (229-367)||(25466292-25466431)
chr6 (229-367)||(13878380-13878519)
chr6 (217-367)||(26084725-26084876)
chr6 (229-367)||(30975089-30975228)
chr6 (229-367)||(30981528-30981667)
chr6 (229-367)||(30987692-30987831)
chr6 (229-367)||(13883128-13883267)
chr6 (229-368)||(26887615-26887755)
chr6 (229-367)||(31249104-31249243)
chr6 (229-367)||(35201716-35201855)
chr6 (229-367)||(16785572-16785711)
chr6 (283-367)||(26064756-26064841)
chr6 (284-367)||(1230683-1230767)
chr6 (252-354)||(25941330-25941433)
chr6 (217-367)||(28241710-28241860)
chr6 (285-367)||(35209007-35209090)
chr6 (102-159)||(17695117-17695174)
chr6 (102-159)||(25466165-25466222)
chr6 (217-363)||(22343184-22343331)
chr6 (102-159)||(13467729-13467786)
chr6 (102-159)||(22352118-22352175)
chr6 (102-159)||(25941504-25941561)
chr6 (102-157)||(22343067-22343122)
chr6 (102-159)||(33215686-33215743)
chr6 (217-367)||(22352235-22352386)
chr6 (282-368)||(26642828-26642915)
chr6 (282-368)||(26748794-26748881)
chr6 (287-367)||(13467955-13468036)
chr6 (104-143)||(3577782-3577821)
chr6 (102-159)||(5166081-5166137)
chr6 (229-313)||(33215533-33215617)
chr6 (102-159)||(13878588-13878645)
chr6 (102-159)||(13883336-13883393)
chr6 (102-159)||(30974963-30975020)
chr6 (102-159)||(30981402-30981459)
chr6 (102-159)||(30987566-30987623)
chr6 (102-159)||(31248978-31249035)
chr6 (322-367)||(33215499-33215545)
chr6 (102-159)||(35201590-35201647)
chr6 (102-159)||(35208825-35208882)
chr6 (102-159)||(16785780-16785837)
chr6 (102-159)||(26887488-26887545)
chr6 (320-367)||(14507668-14507716)
[»] chr8 (30 HSPs)
chr8 (229-367)||(9021499-9021638)
chr8 (229-367)||(29555178-29555317)
chr8 (229-367)||(4812879-4813018)
chr8 (229-367)||(16752913-16753052)
chr8 (229-367)||(25684296-25684435)
chr8 (229-367)||(28895153-28895292)
chr8 (252-367)||(16757660-16757776)
chr8 (252-367)||(590466-590582)
chr8 (217-367)||(21033520-21033671)
chr8 (229-367)||(28327561-28327700)
chr8 (229-367)||(28332284-28332423)
chr8 (252-364)||(3275955-3276069)
chr8 (102-159)||(9021373-9021430)
chr8 (102-159)||(21033729-21033786)
chr8 (217-368)||(22685054-22685206)
chr8 (102-159)||(3276203-3276260)
chr8 (102-159)||(29555051-29555108)
chr8 (280-367)||(23180003-23180091)
chr8 (102-159)||(590653-590710)
chr8 (102-159)||(4812751-4812808)
chr8 (102-159)||(25684504-25684561)
chr8 (102-159)||(28327769-28327826)
chr8 (102-159)||(28332492-28332549)
chr8 (102-159)||(15944733-15944789)
chr8 (102-159)||(23179827-23179884)
chr8 (104-159)||(15949394-15949448)
chr8 (102-159)||(28895361-28895418)
chr8 (114-159)||(2267301-2267346)
chr8 (115-159)||(17799720-17799764)
chr8 (115-159)||(33032496-33032540)
[»] chr3 (60 HSPs)
chr3 (229-367)||(22627556-22627695)
chr3 (230-367)||(16461853-16461991)
chr3 (229-366)||(54188160-54188298)
chr3 (229-367)||(5858197-5858336)
chr3 (229-367)||(10896655-10896794)
chr3 (229-367)||(29914345-29914484)
chr3 (229-367)||(29963498-29963637)
chr3 (252-367)||(10595425-10595541)
chr3 (252-367)||(47878565-47878681)
chr3 (274-367)||(54192897-54192991)
chr3 (217-367)||(9604998-9605150)
chr3 (217-367)||(4308667-4308818)
chr3 (217-367)||(51727392-51727543)
chr3 (229-367)||(10208391-10208530)
chr3 (229-367)||(10094459-10094598)
chr3 (283-369)||(43225825-43225912)
chr3 (231-367)||(10100484-10100621)
chr3 (230-351)||(10613171-10613293)
chr3 (283-367)||(35918401-35918486)
chr3 (229-367)||(10201345-10201484)
chr3 (252-367)||(20031764-20031882)
chr3 (102-159)||(5858405-5858462)
chr3 (102-159)||(47878437-47878494)
chr3 (102-159)||(54193084-54193141)
chr3 (217-367)||(25690742-25690893)
chr3 (217-367)||(27101646-27101797)
chr3 (283-366)||(29956218-29956302)
chr3 (283-366)||(30005373-30005457)
chr3 (102-159)||(48390486-48390543)
chr3 (102-159)||(54188367-54188424)
chr3 (102-158)||(20031580-20031636)
chr3 (229-316)||(6303015-6303102)
chr3 (282-367)||(10949724-10949810)
chr3 (102-159)||(4535473-4535530)
chr3 (102-159)||(10613044-10613101)
chr3 (303-367)||(10901398-10901463)
chr3 (102-159)||(10949525-10949581)
chr3 (282-367)||(27762471-27762557)
chr3 (102-159)||(22626250-22626306)
chr3 (114-159)||(47883159-47883204)
chr3 (229-313)||(27543980-27544064)
chr3 (281-367)||(4535262-4535349)
chr3 (297-367)||(11079169-11079240)
chr3 (282-367)||(47883326-47883412)
chr3 (102-159)||(10896864-10896921)
chr3 (119-159)||(11079377-11079417)
chr3 (252-334)||(48390634-48390717)
chr3 (102-159)||(27762252-27762307)
chr3 (102-159)||(29914219-29914276)
chr3 (323-367)||(43228032-43228077)
chr3 (102-159)||(6303171-6303228)
chr3 (102-159)||(10094338-10094395)
chr3 (102-159)||(10201218-10201275)
chr3 (102-159)||(10208264-10208321)
chr3 (102-159)||(16462062-16462119)
chr3 (102-146)||(10100355-10100400)
chr3 (113-159)||(10595310-10595354)
chr3 (130-159)||(3329720-3329749)
chr3 (130-158)||(7768505-7768533)
chr3 (320-367)||(27543946-27543994)
[»] chr2 (40 HSPs)
chr2 (230-368)||(20055162-20055301)
chr2 (230-367)||(20050416-20050554)
chr2 (230-367)||(22717618-22717756)
chr2 (229-367)||(33674797-33674936)
chr2 (252-367)||(27518035-27518151)
chr2 (252-367)||(30478666-30478782)
chr2 (230-367)||(12781613-12781751)
chr2 (252-367)||(22712910-22713026)
chr2 (252-367)||(35894655-35894771)
chr2 (229-367)||(2735858-2735997)
chr2 (229-367)||(39679698-39679837)
chr2 (229-367)||(45567062-45567201)
chr2 (274-367)||(17943210-17943304)
chr2 (284-367)||(2740594-2740678)
chr2 (285-367)||(39686636-39686719)
chr2 (285-367)||(17462088-17462171)
chr2 (102-159)||(22712782-22712839)
chr2 (102-159)||(35894527-35894584)
chr2 (102-159)||(20050288-20050345)
chr2 (102-159)||(20055031-20055088)
chr2 (102-159)||(30478853-30478910)
chr2 (102-159)||(37171018-37171075)
chr2 (226-367)||(37171140-37171283)
chr2 (102-159)||(12781487-12781543)
chr2 (252-365)||(5377835-5377948)
chr2 (102-159)||(38190857-38190913)
chr2 (102-159)||(27517905-27517964)
chr2 (282-367)||(38190649-38190735)
chr2 (114-159)||(17943397-17943442)
chr2 (322-367)||(45280457-45280503)
chr2 (104-159)||(17932493-17932548)
chr2 (102-159)||(2736066-2736123)
chr2 (102-159)||(2740802-2740859)
chr2 (102-159)||(17462297-17462354)
chr2 (102-159)||(22717491-22717548)
chr2 (102-143)||(33674671-33674713)
chr2 (102-159)||(39686844-39686901)
chr2 (102-159)||(45567270-45567327)
chr2 (104-159)||(39679906-39679961)
chr2 (322-366)||(17932328-17932373)
[»] chr5 (25 HSPs)
chr5 (229-367)||(2298389-2298528)
chr5 (221-367)||(42237954-42238101)
chr5 (229-367)||(25452146-25452285)
chr5 (221-367)||(40222414-40222561)
chr5 (217-368)||(10529487-10529639)
chr5 (217-367)||(1240078-1240229)
chr5 (217-367)||(6747044-6747195)
chr5 (252-367)||(22672504-22672620)
chr5 (252-367)||(35385846-35385962)
chr5 (217-368)||(6744800-6744952)
chr5 (229-361)||(1170470-1170603)
chr5 (102-158)||(1240288-1240344)
chr5 (285-367)||(25445219-25445302)
chr5 (102-159)||(22672693-22672750)
chr5 (102-159)||(40222622-40222679)
chr5 (217-365)||(39854226-39854375)
chr5 (283-367)||(4409797-4409882)
chr5 (102-159)||(35385718-35385775)
chr5 (102-159)||(42238163-42238219)
chr5 (102-159)||(17841516-17841572)
chr5 (102-158)||(1170673-1170729)
chr5 (102-159)||(10627222-10627278)
chr5 (102-159)||(2298267-2298324)
chr5 (102-159)||(25452354-25452411)
chr5 (102-159)||(26406739-26406795)
[»] chr1 (19 HSPs)
chr1 (229-367)||(9521367-9521506)
chr1 (252-368)||(21353741-21353858)
chr1 (248-367)||(2232262-2232382)
chr1 (229-367)||(9526117-9526256)
chr1 (284-367)||(2393728-2393812)
chr1 (283-367)||(2617280-2617365)
chr1 (284-367)||(2401642-2401726)
chr1 (102-159)||(9526325-9526382)
chr1 (102-159)||(21353612-21353669)
chr1 (252-367)||(25133681-25133798)
chr1 (297-367)||(23689313-23689384)
chr1 (102-159)||(25133931-25133987)
chr1 (102-159)||(2232458-2232515)
chr1 (102-159)||(9521574-9521631)
chr1 (130-159)||(2393575-2393604)
chr1 (130-159)||(2401489-2401518)
chr1 (102-159)||(3091373-3091428)
chr1 (115-159)||(4144979-4145023)
chr1 (320-367)||(20291280-20291328)
[»] scaffold0131 (2 HSPs)
scaffold0131 (229-365)||(30795-30932)
scaffold0131 (102-159)||(31002-31059)
[»] scaffold0256 (2 HSPs)
scaffold0256 (229-367)||(15976-16115)
scaffold0256 (102-159)||(16184-16241)
[»] scaffold1764 (2 HSPs)
scaffold1764 (252-367)||(1108-1224)
scaffold1764 (102-146)||(1307-1352)
[»] scaffold0004 (2 HSPs)
scaffold0004 (252-368)||(188637-188754)
scaffold0004 (102-159)||(188508-188565)
[»] scaffold0209 (2 HSPs)
scaffold0209 (252-367)||(17380-17496)
scaffold0209 (102-159)||(17252-17309)
[»] scaffold0038 (1 HSPs)
scaffold0038 (217-367)||(41872-42022)
[»] scaffold0552 (1 HSPs)
scaffold0552 (283-367)||(1264-1349)
[»] scaffold0006 (2 HSPs)
scaffold0006 (285-350)||(224510-224576)
scaffold0006 (102-159)||(224680-224737)
[»] scaffold0016 (1 HSPs)
scaffold0016 (335-367)||(120569-120601)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 8529069 - 8528917
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  8529069 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 8528970  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  8528969 tctccatcgtgacacgattctccagaaatctgattttaagttaactctcacac 8528917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 230 - 367
Target Start/End: Complemental strand, 40637006 - 40636868
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40637006 ccatcgtggcacgatgcggcttcatcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 40636907  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || |||||||| |||||||||||||||||||||||||||    
T  40636906 acgattctccaaaattctgattttaagttaactctcaca 40636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 18586755 - 18586616
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||| ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18586755 accatcatggcacgatgcggcttcatcgtggcacaatttttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtgg 18586656  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||||||||    
T  18586655 cacgattctccagatttctgattttaagttaactctcaca 18586616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 230 - 369
Target Start/End: Complemental strand, 16489139 - 16488999
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||| ||||||||   || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16489139 ccatcgtggcacgatgcggcttcatcatggcacgaaaattccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 16489040  T
Q  330 ac-attctccagaattctgattttaagttaactctcacacc 369  Q
    || |||||||||| |||||||||||||||||||||||||||    
T  16489039 acgattctccagatttctgattttaagttaactctcacacc 16488999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 230 - 367
Target Start/End: Complemental strand, 31300212 - 31300074
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||| |||| | ||| |||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31300212 ccatcgtgccacgttacggattcatcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggc 31300113  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || |||||||||| |||||||||||||||||||||||||    
T  31300112 acgattctccagatttctgattttaagttaactctcaca 31300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 15312110 - 15311994
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||| ||||||  |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  15312110 catcgttgcacgaaattttcagtagcttccttagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattctccagatttctgatt 15312011  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  15312010 ttaagttaactctcaca 15311994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 15316746 - 15316630
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  |||  | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  15316746 catcgtggcacgaaatttctagtagcttcctcagaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtggcacgattctccagatttctgatt 15316647  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  15316646 ttaagttaactctcaca 15316630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 11853341 - 11853202
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| ||||  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  11853341 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccaatgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 11853242  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  11853241 cacgatactccagatttctgattttaagttaactctcaca 11853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 15830929 - 15830817
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  15830929 catcgtggcacgaaatttccagtagctccctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgatt 15830830  T
Q  351 ttaagttaactct 363  Q
    |||||||||||||    
T  15830829 ttaagttaactct 15830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 8631811 - 8631963
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||||||||||| ||     ||| |||||||||||||| | | | ||  || ||||| ||||||||||||||||||| ||| ||    
T  8631811 atcttcaatcgcaccatcgtggcacgattcgatccaatcttggcacgatttttttagt-gattgttccagaattttgcttcaacaatcgtggcacgaagc 8631909  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  8631910 ttctccatcgtggcacgattctccagaattctgattttaagttaactctgacac 8631963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 250 - 367
Target Start/End: Complemental strand, 4884649 - 4884531
Alignment:
Q  250 ttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctga 348  Q
    ||||||||||||| |||||| || |  || | | ||||||||||||||||||||||| | || ||||||||||||||||||| |||||||||| ||||||    
T  4884649 ttcatcgtggcacaatttttccagtgactgctttagaatcttgcttcaacaatcgtgacacgttgcttctccatcgtggcacgattctccagatttctga 4884550  T
Q  349 ttttaagttaactctcaca 367  Q
    |||||||||||||||||||    
T  4884549 ttttaagttaactctcaca 4884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 6764739 - 6764654
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6764739 cagaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 6764654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 16689326 - 16689472
Alignment:
Q  221 tcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctc 320  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||| || |  || | ||| || |||||||||||||||| ||  ||| |||||||    
T  16689326 tcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcaaaaacttgcttcaacaatcgcggaacga-gcttctc 16689424  T
Q  321 catcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||| |||||||||  ||| |||||||||||||||||||||    
T  16689425 catcgtggcacgattctccagttttcagattttaagttaactctcaca 16689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 4556325 - 4556382
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4556325 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 4556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 15831057 - 15831000
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15831057 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 15831000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 16689206 - 16689263
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16689206 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 16689263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 4556440 - 4556585
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    ||||||||||||||||||||| |||| ||||  |||||||||||||||||||| |      | | |||||| |||  |||||||||||||||  | ||||    
T  4556440 atcttcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttcc------tgcttcagaaacttatttcaacaatcgtggcatgttgct 4556533  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| |||||||||  ||| |||||||||||||||||||||    
T  4556534 tctccatcgtggcacgattctccagttttcagattttaagttaactctcaca 4556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 4884790 - 4884736
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttata 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4884790 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttata 4884736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 15316874 - 15316817
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15316874 tctaaaccctgtttttctacacactttaccatctgatacaaggcttatatttatagtg 15316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 18586882 - 18586825
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18586882 tctaaaccctatttttctacacactttatcatctgatacaaggcttatatttatagtg 18586825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 47868346 - 47868195
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||| |||||||||||||  |     ||||||||||||||||| || | | || ||| | ||| ||||||||||||| ||| | ||| ||    
T  47868346 atcttcaatcgcactatcgtggcacgattagatccaatcgtggcacgatttttccagt-gattgctccaaaattttgcttcaacaatggtgacacgaagc 47868248  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47868247 ttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 47868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 2485308 - 2485390
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctca 365  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  2485308 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctcctgaa-tctgattttaagttaactctca 2485390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 31300340 - 31300283
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  31300340 tctaaaccctgtttttctacacactttatcatatgatacaaagcttatatttatagtg 31300283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 25699487 - 25699401
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcaca-ttctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||||| || |||||||||||||||||||| |||| | || | |||||||||||||||||||||||    
T  25699487 tcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacatttcttctgattcctgattttaagttaactctcaca 25699401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 4569999 - 4569954
Alignment:
Q  114 ttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4569999 ttttctacacactttatcatctgatacaaggcttatatttatagtg 4569954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 8529183 - 8529126
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  8529183 tctaaaccctatttttctacacactttatgatctgatacaaagcttatatttatagtg 8529126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16489265 - 16489209
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  16489265 tctaaaccctgtttt-ctacacactttatcatctgatacaaggcttatattcatagtg 16489209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 26086240 - 26086292
Alignment:
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  26086240 ttctccatcgtggcacgattctctagaattctgattttaagttaactctcaca 26086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 25699663 - 25699609
Alignment:
Q  104 taaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  25699663 taaaccctgtttt-ctacacactttatcatatgatacaagacttatatttatagtg 25699609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 7050722 - 7050802
Alignment:
Q  288 tcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||  ||||||||| | ||||||||||| | |||||||||    
T  7050722 tcttgtttcaacaatcgtggcacgttgcttctctatcgtggcacgtttctccagattcctgattttaagctgactctcaca 7050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 16638742 - 16638692
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatattt 153  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  16638742 tctaaaccctgtttt-ctacacactttttcatctgatacaaggtttatattt 16638692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 11853467 - 11853410
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  11853467 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 11853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 7050499 - 7050551
Alignment:
Q  104 taaaccct-gtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||||||||||    ||||||||||||||||||||||    
T  7050499 taaaccctagtttttctacacactttatcat----tacaaggcttatatttatagtg 7050551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 514
Target Start/End: Original strand, 32840970 - 32841041
Alignment:
Q  443 caagatagggggaggacattcctcaggggcatcgtaattgccttagtcatttcccaagtctttacactggta 514  Q
    |||||||| | || ||| |||||||||||||||  | | |||||||||||||||||| || |||||||||||    
T  32840970 caagatagagagaagacgttcctcaggggcatcacagtcgccttagtcatttcccaaatccttacactggta 32841041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 36769335 - 36769306
Alignment:
Q  130 tcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||    
T  36769335 tcatctgatacaaggcttatatttatagtg 36769306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 6e-54; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 230 - 368
Target Start/End: Original strand, 44512919 - 44513058
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44512919 ccatcgtggcacgatgcggcttcatcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 44513018  T
Q  330 ac-attctccagaattctgattttaagttaactctcacac 368  Q
    || ||||||||||||| |||||||||||||||||||||||    
T  44513019 acaattctccagaattttgattttaagttaactctcacac 44513058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 7464913 - 7465029
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7464913 catcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgatt 7465012  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  7465013 ttaagttaactctcaca 7465029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 30246758 - 30246642
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  30246758 catcgtggcacgaaatttccaatagcttcctcagaatcttgcttcaacaatcgtggcgcaatgcttctccatcgtggcacgattctccagatttctgatt 30246659  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  30246658 ttaagttaactctcaca 30246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 368
Target Start/End: Complemental strand, 25351143 - 25351004
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||   || || |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  25351143 ccatcgtggcacgatgcggcttcatcgtggcacgaaaattccagtagcttcctcaggatcttgctccaacaatcgtggcacgatgcttctccatcgtggc 25351044  T
Q  330 ac-attctccagaattctgattttaagttaactctcacac 368  Q
    || |||||||| | |||||||||||||||||||| |||||    
T  25351043 acgattctccaaatttctgattttaagttaactcccacac 25351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 368
Target Start/End: Complemental strand, 25356837 - 25356698
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||   || || |||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  25356837 ccatcgtggcacgatgcggcttcatcgtggcacgaaaattccagtagcttcctcaggatcttgctccaacaatcgtggcacgatgcttctccatcgtggc 25356738  T
Q  330 ac-attctccagaattctgattttaagttaactctcacac 368  Q
    || |||||||| | |||||||||||||||||||| |||||    
T  25356737 acgattctccaaatttctgattttaagttaactcccacac 25356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 34547257 - 34547374
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  34547257 catcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgacacgattctccagatttctgatt 34547356  T
Q  351 ttaagttaactctcacac 368  Q
    ||||||||||||||||||    
T  34547357 ttaagttaactctcacac 34547374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 8378833 - 8378949
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    ||||||| |||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  8378833 catcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaatttctgatt 8378932  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  8378933 ttaagttaactctcaca 8378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 229 - 361
Target Start/End: Original strand, 3320440 - 3320573
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || | ||||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  3320440 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtggcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 3320539  T
Q  329 cac-attctccagaattctgattttaagttaact 361  Q
    ||| || ||||||| |||||||||||||||||||    
T  3320540 cacgatgctccagatttctgattttaagttaact 3320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 7069572 - 7069433
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| | ||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  7069572 accatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 7069473  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  7069472 cacgatactccagatttctgattttaagttaactctcaca 7069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 7074579 - 7074440
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| | ||||||||||||||||  ||| || |  |||||   ||||||||||||||| |||||||| |||||||||||||||||||    
T  7074579 accatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcacgatgcttctccatcgtgg 7074480  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  7074479 cacgatactccagatttctgattttaagttaactctcaca 7074440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 25405185 - 25405046
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||    | || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  25405185 accatcgtggcgcgatgaggcttcatcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 25405086  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  25405085 cacgatactccagatttctgattttaagttaactctcaca 25405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 25409919 - 25409809
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||   || || |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  25409919 catcgtggcacgaaaattccagtagcttcctcaggatcttcctccaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 25409820  T
Q  351 ttaagttaact 361  Q
    |||||||||||    
T  25409819 ttaagttaact 25409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 229 - 361
Target Start/End: Original strand, 3325188 - 3325321
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || | ||||||   ||||||||||||||| ||||||| ||||||||||||||||||||    
T  3325188 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtggcttcccaggaatcttgcttcaaccatcgtggtgcgatgcttctccatcgtgg 3325287  T
Q  329 cac-attctccagaattctgattttaagttaact 361  Q
    ||| || || |||| |||||||||||||||||||    
T  3325288 cacgatgcttcagatttctgattttaagttaact 3325321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 40946225 - 40946076
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||||||||||| ||     |||||| |||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  40946225 atcttcaatcgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagc 40946127  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctca 365  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40946126 ttcttcatcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 30246886 - 30246829
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30246886 tctaaaccctgtttttctccacactttatcatctgatacaaggcttatatttatagtg 30246829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 34547129 - 34547186
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34547129 tctaaaccctgtttttctacacactttatcatctgatacaagacttatatttatagtg 34547186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 44512791 - 44512848
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44512791 tctaaaccctgtttttctacacactttatcatcttatacaaggcttatatttatagtg 44512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25410046 - 25409990
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25410046 tctaaaccctgtttt-ctacacactttatcatctgatacaaggcttatatttatagtg 25409990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 7464786 - 7464841
Alignment:
Q  104 taaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  7464786 taaaccctgtttttctacacactttatcatcttatacaagacttatatttatagtg 7464841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25351269 - 25351213
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  25351269 tctaaaccctgtttt-ctacacactttatcatctgatataaggcttatatttatagtg 25351213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25356963 - 25356907
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  25356963 tctaaaccctgtttt-ctacacactttatcatctgatataaggcttatatttatagtg 25356907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 44144352 - 44144438
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||||| || || ||||||||||||||||  ||||| ||| | |||||||||||||||||||||||    
T  44144352 tcaggatcttgtttcaacaatcgtggcacgttgtttctccatcgtggcacgtttctctagattcctgattttaagttaactctcaca 44144438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 368
Target Start/End: Complemental strand, 48457487 - 48457440
Alignment:
Q  322 atcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  48457487 atcgtggcacgattctccagaattctgattttaagttaactctcacac 48457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 44011017 - 44011073
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||    
T  44011017 tctaaaccctgtttt-ctacacacataatcatctgatacaaggtttatatttatagtg 44011073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 44016928 - 44016984
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||    
T  44016928 tctaaaccctgtttt-ctacacacataatcatctgatacaaggtttatatttatagtg 44016984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 44144143 - 44144188
Alignment:
Q  114 ttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  44144143 ttttctacacactttatcgtctgatacaagacttatatttatagtg 44144188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 3320313 - 3320359
Alignment:
Q  101 atctaaaccctgtttttctacacac-tttatcatctgatacaaggct 146  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3320313 atctaaaccttgtttttctacacacttttatcatctgatacaaggct 3320359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 3325061 - 3325107
Alignment:
Q  101 atctaaaccctgtttttctacacac-tttatcatctgatacaaggct 146  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3325061 atctaaaccttgtttttctacacacttttatcatctgatacaaggct 3325107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 7069698 - 7069641
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  7069698 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 7069641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 7074705 - 7074648
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  7074705 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 7074648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 8378770 - 8378827
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  8378770 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 8378827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25405311 - 25405254
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  25405311 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 25405254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 2120624 - 2120591
Alignment:
Q  335 ctccagaattctgattttaagttaactctcacac 368  Q
    ||||||||||||||||||||||||||||||||||    
T  2120624 ctccagaattctgattttaagttaactctcacac 2120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 15541259 - 15541304
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggct 146  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  15541259 tctaaaccttgtttttctacacacttttatcatctgatacaaggct 15541304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 42006579 - 42006524
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagt 158  Q
    ||||||||||||||||||||||| ||| |||||| ||||| || |||||||||||||    
T  42006579 tctaaaccctgtttttctacaca-tttttcatcttatacacggtttatatttatagt 42006524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 2120662 - 2120626
Alignment:
Q  277 cttcctcagaatcttgcttcaacaatcgtggcgcgat 313  Q
    |||||||||||| |||||||| |||||||||||||||    
T  2120662 cttcctcagaattttgcttcaccaatcgtggcgcgat 2120626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 3878370 - 3878322
Alignment:
Q  320 ccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  3878370 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 17695244 - 17695382
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    ||||||||||||||||||||||||||||||||| |   || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17695244 ccatcgtggcacgatgcggcttcatcgtggcacaaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 17695343  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || ||||||||||||||||||||||||||||||||||||    
T  17695344 acgattctccagaattctgattttaagttaactctcaca 17695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 25466292 - 25466431
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||| |||||||||||||||||||||||  ||| || ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  25466292 accatcgtggcatgatgcggcttcatcgtggcacgaaatttccagtagcttccttagaatcttgcttcaacaattgtggcacgatgcttctccatcgtgg 25466391  T
Q  329 ca-cattctccagaattctgattttaagttaactctcaca 367  Q
    ||  |||||| ||| |||||||||||||||||||||||||    
T  25466392 catgattctctagatttctgattttaagttaactctcaca 25466431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 13878519 - 13878380
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  | |||||||||||||||||||||| || ||||||||   ||||||||||||||| |||||||||||||||||||||||| |||    
T  13878519 accatcgtggcacgaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcatgg 13878420  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  13878419 cacgatgctccagatttctgattttaagttaactctcaca 13878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 26084876 - 26084725
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    ||||||||||||||||||||| |||||||||  |  ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  26084876 atcttcaatcgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagc 26084778  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26084777 ttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26084725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 30975089 - 30975228
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| ||||  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  30975089 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 30975188  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  30975189 cacgatactccagatttctgattttaagttaactctcaca 30975228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 30981528 - 30981667
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| ||||  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  30981528 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 30981627  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  30981628 cacgatactccagatttctgattttaagttaactctcaca 30981667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 30987692 - 30987831
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| ||||  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  30987692 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 30987791  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  30987792 cacgatactccagatttctgattttaagttaactctcaca 30987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 13883267 - 13883128
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  13883267 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 13883168  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  13883167 cacgatactccagatttctgattttaagttaactctcaca 13883128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 26887615 - 26887755
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |  || ||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  26887615 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 26887714  T
Q  329 cac-attctccagaattctgattttaagttaactctcacac 368  Q
    ||| || ||||||| ||||||||||||||||||||||||||    
T  26887715 cacgatgctccagatttctgattttaagttaactctcacac 26887755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 31249104 - 31249243
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| | ||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  31249104 accatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 31249203  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  31249204 cacgatactccagatttctgattttaagttaactctcaca 31249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 35201716 - 35201855
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| | ||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  35201716 accatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 35201815  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  35201816 cacgatactccagatttctgattttaagttaactctcaca 35201855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 16785711 - 16785572
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  | ||||||||||||||| |||||| || |  |||||   ||||||||||||||| ||||||||||||||||| || |||||||    
T  16785711 accatcgtggcacgaccctgcttcatcgtggcacaatttttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttttcgatcgtgg 16785612  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  16785611 cacgatgctccagatttctgattttaagttaactctcaca 16785572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 26064841 - 26064756
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26064841 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26064756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 1230683 - 1230767
Alignment:
Q  284 agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1230683 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1230767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 252 - 354
Target Start/End: Complemental strand, 25941433 - 25941330
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  25941433 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 25941334  T
Q  351 ttaa 354  Q
    ||||    
T  25941333 ttaa 25941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 28241710 - 28241860
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||| ||||||||||||| ||     ||||||||||||||||| || | | || | |||||  ||||| ||||||||||||| ||| |||    
T  28241710 atcttcaatcgcactatcgtggcacgattcgatacaatcgtggcacgatttttccagt-gtttgcccagaactttgctccaacaatcgtggcacgaagct 28241808  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  28241809 tctccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 28241860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 35209007 - 35209090
Alignment:
Q  285 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||    
T  35209007 gaatcttgcttcaaccatcgtggcgcgatgcttctccattgtggcacgatactccagatttctgattttaagttaactctcaca 35209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 17695117 - 17695174
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17695117 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 17695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 25466165 - 25466222
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25466165 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 25466222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 217 - 363
Target Start/End: Original strand, 22343184 - 22343331
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||||||||||| |||||  |     ||||||||||||||||| ||||   | |  |||| | ||||||||||||||||||| ||| |||    
T  22343184 atcttcaatcgcaccatcgtggtacgatttgatccaatcgtggcacgatttttccaatgaatgctccagagttttgcttcaacaatcgtggcacgaagct 22343283  T
Q  317 tctccatcgtggc-acattctccagaattctgattttaagttaactct 363  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||    
T  22343284 tctccatcgtggcttgattctccagaattctgattttaagttaactct 22343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 13467729 - 13467786
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13467729 tctaaaccctgtttttctacacactttatcatttgatacaaggcttatatttatagtg 13467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 22352118 - 22352175
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22352118 tctaaaccctgtttttctacacactttatcatctgatacaaggtttatatttatagtg 22352175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25941561 - 25941504
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25941561 tctaaaccatgtttttctacacactttatcatctgatacaaggcttatatttatagtg 25941504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 22343067 - 22343122
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatag 157  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22343067 tctaaaccctgtttttctacacactttatcatatgatacaaggcttatatttatag 22343122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 33215743 - 33215686
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33215743 tctaaactctgtttttctacacactttatcatctgacacaaggcttatatttatagtg 33215686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 22352235 - 22352386
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||||||||||||||||| ||     |||||||||| |||||| || |   | |  |||||| ||| ||||||||||||||| ||| |||    
T  22352235 atcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacaatttttccagtgaatgctccagaattttgattcaacaatcgtggcacgaagct 22352334  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||| || |||| |||||| ||||||  |||||||||||||||||||||    
T  22352335 tctccattgtagcacgattctctagaatttagattttaagttaactctcaca 22352386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 26642915 - 26642828
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    ||||||||||| |||||||||||| || || | |||||||||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  26642915 tcagaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcacac 26642828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 26748881 - 26748794
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    ||||||||||| |||||||||||| || || | |||||||||||||||||  ||||||||| | ||||||||||||||||||||||||    
T  26748881 tcagaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcacac 26748794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 13467955 - 13468036
Alignment:
Q  287 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggca-cattctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||||||||| || |||||||||||||||| |   ||||||| | | |||||||||||||||||||||||    
T  13467955 atcttgcttcaacaatcgtggcacgttgcttctccatcgtggtatgtttctccaaattcctgattttaagttaactctcaca 13468036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 3577782 - 3577821
Alignment:
Q  104 taaaccctgtttttctacacactttatcatctgatacaag 143  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3577782 taaaccctgtttttctacacactttatcatctgatacaag 3577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 5166081 - 5166137
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| | ||||||||||||||| |||||||||||||||    
T  5166081 tctaaaccctgtttt-ctacacacataatcatctgatacaagacttatatttatagtg 5166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 33215617 - 33215533
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgat 313  Q
    ||||||||| |||| ||||  |||||||||||||||||||| || |  || | |||||||||| |||||||||||||||| ||||    
T  33215617 accatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcagaatctttcttcaacaatcgtggcacgat 33215533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 13878645 - 13878588
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  13878645 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 13878588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 13883393 - 13883336
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  13883393 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 13883336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 30974963 - 30975020
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  30974963 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 30975020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 30981402 - 30981459
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  30981402 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 30981459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 30987566 - 30987623
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  30987566 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 30987623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 31248978 - 31249035
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  31248978 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 31249035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 33215545 - 33215499
Alignment:
Q  322 atcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  33215545 atcgtggcacgattctccagatttctgattttaagttaactctcaca 33215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 35201590 - 35201647
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  35201590 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 35201647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 35208825 - 35208882
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  35208825 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 35208882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16785837 - 16785780
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| | |||||||||||    
T  16785837 tctaaaccttgtttttctacacacttttatcatctgctacaaggc-tgtatttatagtg 16785780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 26887488 - 26887545
Alignment:
Q  102 tctaaaccctgtttttctacacacttt-atcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||| | |||||||||||    
T  26887488 tctaaaccttgtttttctacacgcttttatcatctgatacaaggc-tgtatttatagtg 26887545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Original strand, 14507668 - 14507716
Alignment:
Q  320 ccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  14507668 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 9021499 - 9021638
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||| ||||||||||||||||||||||   || || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9021499 accatcgtggcacaatgcggcttcatcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtgg 9021598  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  9021599 cacgattctccagaattctgattttaagttaactctcaca 9021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 29555178 - 29555317
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||||| |   |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29555178 accatcgtggcacgatgcagggccatcgtggcacgaaatttccaatagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtag 29555277  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||||||||    
T  29555278 cacgattctccagatttctgattttaagttaactctcaca 29555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 4812879 - 4813018
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  4812879 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 4812978  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  4812979 cacgatactccagatttctgattttaagttaactctcaca 4813018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 16752913 - 16753052
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  | |||||||||||||||||||||| || ||||||||   ||||||||||||||| ||||||||||||||| |||| |||||||    
T  16752913 accatcgtggcacgaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctctatcgtgg 16753012  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| ||||||||||||||||| |||||||    
T  16753013 cacgatgctccagatttctgattttaagttaagtctcaca 16753052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 25684435 - 25684296
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||||| ||||||||||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  25684435 accatcgtggcgcgatgcgtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 25684336  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  25684335 cacgatgctccagatttctgattttaagttaactctcaca 25684296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 28895292 - 28895153
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||   | |||||||||||||||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||| ||||||||    
T  28895292 accatcgtggcacggcactgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctacatcgtgg 28895193  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||| |||| | |||||||||||| |||||||    
T  28895192 cacgattctccaaaatttttattttaagttaagtctcaca 28895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 16757660 - 16757776
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||||||| || ||||||||   ||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||||    
T  16757660 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctccatcgtggcacgatgctccagatttctgatt 16757759  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  16757760 ttaagttaactctcaca 16757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 590582 - 590466
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   |||||||||||||||||||||||||||||||||||  |||||||||| || ||||||| ||||||||    
T  590582 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctttatcgtggcacgatactccagatttctgatt 590483  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  590482 ttaagttaactctcaca 590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 21033671 - 21033520
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||||||||||||||||| ||  |  || |||||||||||||| || |  || | ||| || |||||||||||||||||||| || ||||    
T  21033671 atcttcaatcgcaccatcgtggcacgattcgattcaattgtggcacgatttttccagtgactgcttcacaaacttgcttcaacaatcgtggcacgttgct 21033572  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| |||||||||  ||  |||||||||||||||||||||    
T  21033571 tctccatcgtggcacgattctccagtttttagattttaagttaactctcaca 21033520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 28327700 - 28327561
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||    | || |  |||||   ||||||||||||| | ||||||||||||||||||||||||||||    
T  28327700 accatcgtggcgcgatgaggcttcatcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtgg 28327601  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  28327600 cacgatgctccagatttctgattttaagttaactctcaca 28327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 28332423 - 28332284
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||    | || |  |||||   ||||||||||||| | ||||||||||||||||||||||||||||    
T  28332423 accatcgtggcgcgatgaggcttcatcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtgg 28332324  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  28332323 cacgatgctccagatttctgattttaagttaactctcaca 28332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 252 - 364
Target Start/End: Complemental strand, 3276069 - 3275955
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcct-cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgat 349  Q
    ||||||||||||||||||  | |  |||||| |||||||||||||||||||||||||| |  |||||||||||||||||||  ||||||||| |||||||    
T  3276069 catcgtggcacgatttttcaagtgacttccttcagaatcttgcttcaacaatcgtggcacattgcttctccatcgtggcacgtttctccagatttctgat 3275970  T
Q  350 tttaagttaactctc 364  Q
    |||||||||||||||    
T  3275969 tttaagttaactctc 3275955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 9021373 - 9021430
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9021373 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 9021430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 21033786 - 21033729
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21033786 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 21033729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 22685054 - 22685206
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||||||||||| ||  |  |||||||||| |||||| || | | || ||| ||||| ||| ||||||||||||||| ||| ||    
T  22685054 atcttcaatcgcaccatcgtggcacgattcgattcgatcgtggcacaatttttccagt-gattgctccagaattttggttcaacaatcgtggcacgaagc 22685152  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||| || |||||    
T  22685153 ttcttcatcgtggcacgattcttcagaattctgattttaagttaagtcccacac 22685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 3276260 - 3276203
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3276260 tctaaaccctgtttttctacacactttatcatctaatacaaggcttatatttatagtg 3276203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 29555051 - 29555108
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29555051 tctaaaccctgtttttctacacactttatcatctgatacaacgcttatatttatagtg 29555108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 367
Target Start/End: Original strand, 23180003 - 23180091
Alignment:
Q  280 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||    
T  23180003 cctcagaatcttgtttcaacaatcatagcacgatgcttctccatcgtagcacgattctccagattcctgattttaagttaactctcaca 23180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 590710 - 590653
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  590710 tctaaaccctgtttttctacactctttatcatctgatacaaggcttagatttatagtg 590653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 4812751 - 4812808
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  4812751 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 4812808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25684561 - 25684504
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  25684561 tctaaaccttgtttttctacacacttttatcatctgatacaagg-ttgtatttatagtg 25684504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 28327826 - 28327769
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  28327826 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 28327769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 28332549 - 28332492
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  28332549 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 28332492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 15944789 - 15944733
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| |||||| |||||||    
T  15944789 tctaaaccctgtttttccacacacttt-tcatatgatacaaggtttatatctatagtg 15944733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 23179827 - 23179884
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||| |   || |||||||||||||| |||||||||||||||    
T  23179827 tctaaaccctgtttttctactcttcttttcatctgatacaagacttatatttatagtg 23179884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 15949448 - 15949394
Alignment:
Q  104 taaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||  |||||||| ||||||||||||||  ||||||||||||||    
T  15949448 taaaccctgtttttcctcacacttt-tcatctgatacaagatttatatttatagtg 15949394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 28895418 - 28895361
Alignment:
Q  102 tctaaaccctgtttttctacacacttt-atcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||| | |||||||||||    
T  28895418 tctaaaccttgtttttctacacccttttatcatctgatacaaggc-tgtatttatagtg 28895361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 2267301 - 2267346
Alignment:
Q  114 ttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||| |  ||||||||||||||| ||||||||||||||    
T  2267301 ttttctacacacatattcatctgatacaaggtttatatttatagtg 2267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 17799720 - 17799764
Alignment:
Q  115 tttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||| | ||||||||||| |||| ||||||||||||||    
T  17799720 tttctacacacataatcatctgatataaggtttatatttatagtg 17799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 33032540 - 33032496
Alignment:
Q  115 tttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||| | ||||||| |||||||| ||||||||||||||    
T  33032540 tttctacacacgtaatcatctaatacaaggtttatatttatagtg 33032496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 22627556 - 22627695
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22627556 accatcgtggcacgacacggcttcatcgtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgagatgcttctccatcgtgg 22627655  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  22627656 cacgatactccagatttctgattttaagttaactctcaca 22627695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 230 - 367
Target Start/End: Complemental strand, 16461991 - 16461853
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  16461991 ccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 16461892  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || || ||||||| |||||||||||||||||||||||||    
T  16461891 acgatactccagatttctgattttaagttaactctcaca 16461853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 229 - 366
Target Start/End: Complemental strand, 54188298 - 54188160
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||||||||||||||||||    | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54188298 accatcgtggcacgatgcggcttcatcgtggcacgaaaaatccagtagcttcctcaggatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 54188199  T
Q  329 cac-attctccagaattctgattttaagttaactctcac 366  Q
    ||| ||||| |||| ||||||||||||||||||||||||    
T  54188198 cacgattcttcagatttctgattttaagttaactctcac 54188160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 5858336 - 5858197
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||   |||||||||||||  ||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5858336 accatcgtggcacgatgcggggccatcgtggcacgaaatttccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 5858237  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| | |||||||||||||||||||||||    
T  5858236 cacgattctccagattcctgattttaagttaactctcaca 5858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 10896794 - 10896655
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||||||||||||||||||  ||| || |||||||||  ||| | ||||||| ||||||||||||||||||||||||||||||    
T  10896794 accatcgtggcacgatgcggcttcatcgtggcacgaaatttccagtagcttcctaggaaccatgcttcagcaatcgtggcgcgatgcttctccatcgtgg 10896695  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||| | |||||||||||||||||||||||||    
T  10896694 cacgatactccatatttctgattttaagttaactctcaca 10896655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 29914345 - 29914484
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||   |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  29914345 accatcgtggcacgatgcggagccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 29914444  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||| ||||    
T  29914445 cacgattctccagatttctgattttaagttaactcccaca 29914484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 29963498 - 29963637
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||   |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  29963498 accatcgtggcacgatgcggagccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 29963597  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||| ||||    
T  29963598 cacgattctccagatttctgattttaagttaactcccaca 29963637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 10595425 - 10595541
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  10595425 catcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcaatgtttctccatcgtggcacgattctccagatttctgatt 10595524  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  10595525 ttaagttaactctcaca 10595541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 47878565 - 47878681
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  47878565 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 47878664  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  47878665 ttaagttaactctcaca 47878681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 54192991 - 54192897
Alignment:
Q  274 tagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  54192991 tagcttccttaggatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 54192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 9604998 - 9605150
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttca-tcgtggcacgattttttcaatagcttcct-cagaatcttgcttcaacaatcgtggcgcgatg 314  Q
    ||||||||||||||||||||| |||||||| | |||| |||||||||||||||||| |  | || || |||||| ||||||||||||||||||| |||      
T  9604998 atcttcaatcgcaccatcgtgccacgatgc-gattcagtcgtggcacgattttttccagtgattgctccagaattttgcttcaacaatcgtggcacgaaa 9605096  T
Q  315 cttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  9605097 cttctccatcgtagcacgattctccagaattctgattttaagttaactctcaca 9605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 4308667 - 4308818
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||||||||||| ||     ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  4308667 atcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagt-gattgctctagaattttgcttcaacaatcgtggcacgaagc 4308765  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4308766 ttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 4308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 51727392 - 51727543
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||| ||||||||||||||||| ||     ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  51727392 atcttcaatcacaccatcgtggcacgattcgatcaaatcgtggcacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagc 51727490  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51727491 ttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 51727543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 10208391 - 10208530
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaa-tcttgcttcaacaatcgtggcgcgatgcttctccatcgtg 327  Q
    ||||||||||| ||||| | ||||||||||||||||  ||| || |  ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10208391 accatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcc-cagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtg 10208489  T
Q  328 gcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| || ||||||| |||||||||||||||||||||||||    
T  10208490 gcacgatactccagatttctgattttaagttaactctcaca 10208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 10094459 - 10094598
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||| | ||||||||||||||||  ||| || |  |||||   ||||||||||||||| |||||| |||||||||||||||||||||    
T  10094459 accatcgtggcacgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtgacgcgatgcttctccatcgtgg 10094558  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
     || || ||||||| |||||||||||||||||||||||||    
T  10094559 aacgatactccagatttctgattttaagttaactctcaca 10094598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 43225912 - 43225825
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcacacc 369  Q
    |||||| |||||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43225912 cagaattttgcttcaacaatcgtagcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcacacc 43225825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 231 - 367
Target Start/End: Original strand, 10100484 - 10100621
Alignment:
Q  231 catcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaa-tcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    ||||||||| ||||| | ||||||||||||||||  ||| || |  ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  10100484 catcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcc-cagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggc 10100582  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || || ||| ||| |||||||||||||||||||||||||    
T  10100583 acgatactctagatttctgattttaagttaactctcaca 10100621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 10613171 - 10613293
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    ||||||||||||||||  |   |||||||||| ||  ||| || |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  10613171 ccatcgtggcacgatgtcgggccatcgtggcatgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgtttctccatcgtggc 10613270  T
Q  330 ac-attctccagaattctgattt 351  Q
    || |||||||||| |||||||||    
T  10613271 acgattctccagatttctgattt 10613293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 35918401 - 35918486
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  35918401 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccataattctgattttaagttaactctcaca 35918486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 10201345 - 10201484
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| | |||||| |||||||||  ||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  10201345 accatcgtggcgcgatgagtcttcattgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 10201444  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
     || || ||||||| ||||||||||||||||| |||||||    
T  10201445 aacgatactccagatttctgattttaagttaaatctcaca 10201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 20031764 - 20031882
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcct-cagaatcttgcttcaacaatcgtggcgcgatgctt-ctccatcgtggcacatt-ctccagaattctga 348  Q
    |||||||||||||||||| || |  |||||| |||||||||||||||||||||||||| |  ||||| |||||||||||||| || ||||||| ||||||    
T  20031764 catcgtggcacgatttttccagtgacttccttcagaatcttgcttcaacaatcgtggcacattgctttctccatcgtggcacgtttctccagatttctga 20031863  T
Q  349 ttttaagttaactctcaca 367  Q
    |||||||||||||||||||    
T  20031864 ttttaagttaactctcaca 20031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 5858462 - 5858405
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5858462 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 5858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 47878437 - 47878494
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878437 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 47878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 54193141 - 54193084
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54193141 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 54193084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 25690742 - 25690893
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    ||||||||||||||||||||||||| || ||     ||| ||||||||||||| || | | || ||| ||||| || |||||||||||||||| ||| ||    
T  25690742 atcttcaatcgcaccatcgtggcacaattcgatccaatcatggcacgatttttccagt-gattgctccagaatttttcttcaacaatcgtggcacgaagc 25690840  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  25690841 ttctccatcgtggcacgattcatcagaattctgattttaagttaactctcaca 25690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 27101646 - 27101797
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||| ||||||||| ||     ||||||||||||||||| || | | ||  || ||||| |||||||||||||| |||| | |  |    
T  27101646 atcttcaatcgcaccatcttggcacgattcgatccaatcgtggcacgatttttccagt-gattgttccagaattttgcttcaacaatcatggcacaaaac 27101744  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27101745 ttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 27101797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 366
Target Start/End: Complemental strand, 29956302 - 29956218
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcac 366  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  29956302 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 29956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 366
Target Start/End: Complemental strand, 30005457 - 30005373
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcac 366  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  30005457 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 30005373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 48390486 - 48390543
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48390486 tctaaaccctgtttttctacacactttatcatctgatacgaggcttatatttatagtg 48390543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 54188424 - 54188367
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54188424 tctaaaccctgtttttctacacactttatcacctgatacaaggcttatatttatagtg 54188367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 20031580 - 20031636
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagt 158  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20031580 tctaaaccctgtttttctacacactttatcatctgatacaagacttatatttatagt 20031636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 316
Target Start/End: Complemental strand, 6303102 - 6303015
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||||  | |||||||||||||||||||||| || ||||||||   ||||||||||||||| ||||||||||||||||    
T  6303102 accatcgtggcacgaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgct 6303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 10949724 - 10949810
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||||| || |||||||||||||||||||  ||||||||| | |||||||||||||||||||||||    
T  10949724 tcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 10949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 4535530 - 4535473
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  4535530 tctaaaccctgtttttctacacactttatcatctgatacaagacttataattatagtg 4535473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 10613044 - 10613101
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10613044 tctaaaccctatttttctacacactttatcatatgatacaaggcttatatttatagtg 10613101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 10901463 - 10901398
Alignment:
Q  303 cgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  10901463 cgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 10901398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 10949525 - 10949581
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10949525 tctaaaccctgtttt-ctacacactttatcatctgatacaaggcttatatttatagtg 10949581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 27762471 - 27762557
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||||| || |||||||||||||||||||  |||| |||| | |||||||||||||||||||||||    
T  27762471 tcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttcttcagattcctgattttaagttaactctcaca 27762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 22626250 - 22626306
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  22626250 tctaaaccctgtttttctacacactttatcatctgatacaaggc-tgtatttatagtg 22626306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 47883159 - 47883204
Alignment:
Q  114 ttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47883159 ttttctacacactttatcatctgatacaaggcttatatttatagtg 47883204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 27544064 - 27543980
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgat 313  Q
    |||||||||||||||  | |||||||||||||||||||||| || ||||||||   ||||||||||||||| |||||||| ||||    
T  27544064 accatcgtggcacgaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcacgat 27543980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 4535349 - 4535262
Alignment:
Q  281 ctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggca-cattctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||  |  |||||||||| |  ||||||||||||||||||||||    
T  4535349 ctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgatatgattctccagattcatgattttaagttaactctcaca 4535262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 11079240 - 11079169
Alignment:
Q  297 aacaatcgtggcgcgatgcttctccatcgtggcacatt-ctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||| || ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  11079240 aacaatcgtggcacgttgcttctccatcgtggcacgtttctccagattactgattttaagttaactctcaca 11079169  T

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Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 47883326 - 47883412
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||| | || |||||||||||||||||||  ||||||| | | |||||||||||||||||||||||    
T  47883326 tcaggatcttgtttcaacaatcgtgacacgttgcttctccatcgtggcacgtttctccaaattcctgattttaagttaactctcaca 47883412  T

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Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 10896921 - 10896864
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||    
T  10896921 tctaaaccctatttttctacacactttatcatctgatacaagacttgtctttatagtg 10896864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 11079417 - 11079377
Alignment:
Q  119 tacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11079417 tacacactttatcatctgatacaaggcttatatttatagtg 11079377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 48390634 - 48390717
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacatt 334  Q
    |||||| ||||||||||| || |  ||||||| ||||||||||||||||||| ||||| || ||||||||||||||| ||||||    
T  48390634 catcgtagcacgatttttccagtgacttcctccagaatcttgcttcaacaattgtggcacgttgcttctccatcgtgacacatt 48390717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 27762252 - 27762307
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||    
T  27762252 tctaaaccctgttt--ctacacactttatcatctgatacaagactaatatttatagtg 27762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 29914219 - 29914276
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  29914219 tctaaaccctgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 29914276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 43228077 - 43228032
Alignment:
Q  323 tcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  43228077 tcgtggcacgattctccagaattctgattttaagttaactctcaca 43228032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 6303228 - 6303171
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  6303228 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 6303171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 10094338 - 10094395
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  10094338 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 10094395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 10201218 - 10201275
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  10201218 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 10201275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 10208264 - 10208321
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  10208264 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 10208321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16462119 - 16462062
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  16462119 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 16462062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 10100355 - 10100400
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggct 146  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  10100355 tctaaaccttgtttttctacacacttttatcatctgatacaaggct 10100400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 10595310 - 10595354
Alignment:
Q  113 tttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||    
T  10595310 tttttctacacact--atcatctgatacaagacttatatttatagtg 10595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 3329749 - 3329720
Alignment:
Q  130 tcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||    
T  3329749 tcatctgatacaaggcttatatttatagtg 3329720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 7768533 - 7768505
Alignment:
Q  130 tcatctgatacaaggcttatatttatagt 158  Q
    |||||||||||||||||||||||||||||    
T  7768533 tcatctgatacaaggcttatatttatagt 7768505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 27543994 - 27543946
Alignment:
Q  320 ccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||| || ||||| | |||||||||||||||||||||||||    
T  27543994 ccatcgtggcacgatactccaaatttctgattttaagttaactctcaca 27543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 230 - 368
Target Start/End: Original strand, 20055162 - 20055301
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||| ||   || || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20055162 ccatcgtggcacgatgcggcttcatcgtggcatgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggc 20055261  T
Q  330 a-cattctccagaattctgattttaagttaactctcacac 368  Q
    |  |||||||||||||||||||||||||||||||||||||    
T  20055262 atgattctccagaattctgattttaagttaactctcacac 20055301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 20050416 - 20050554
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    ||||||||||||| |||||||||||||||||||||   || || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20050416 ccatcgtggcacgttgcggcttcatcgtggcacgaaaattccagtagcttcctcagaatcttgctgcaacaatcgtggcacgatgcttctccatcgtggc 20050515  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || ||||||||||||| ||||||||||||||||||||||    
T  20050516 acgattctccagaattttgattttaagttaactctcaca 20050554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 22717618 - 22717756
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  22717618 ccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 22717717  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || || || |||| |||||||||||||||||||||||||    
T  22717718 acgatacttcagatttctgattttaagttaactctcaca 22717756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 33674797 - 33674936
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  |||||||||||||||||||||||| || ||||||||   ||||||| ||||||||||||||||||||| ||||||||||||||    
T  33674797 accatcgtggcacgacacggcttcatcgtggcacgatttttccagtagcttcccaggaatcttacttcaacaatcgtggcgcgatacttctccatcgtgg 33674896  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||| ||| |||||||||||||||||||||||||    
T  33674897 cacgattctctagatttctgattttaagttaactctcaca 33674936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 27518035 - 27518151
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  27518035 catcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaaaaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattttgatt 27518134  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  27518135 ttaagttaactctcaca 27518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 30478782 - 30478666
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    ||||||| |||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  30478782 catcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 30478683  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  30478682 ttaagttaactctcaca 30478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 12781613 - 12781751
Alignment:
Q  230 ccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 329  Q
    |||||||| |||||| | |  |||||||| |||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781613 ccatcgtgccacgatacagggtcatcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggc 12781712  T
Q  330 ac-attctccagaattctgattttaagttaactctcaca 367  Q
    || ||| |||||| |||||||||||||||||||||||||    
T  12781713 acgattatccagatttctgattttaagttaactctcaca 12781751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 22712910 - 22713026
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22712910 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 22713009  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  22713010 ttaagttaactctcaca 22713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 35894655 - 35894771
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||   || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  35894655 catcgtggcacgaaaattccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagtacaattctccagaattctgatt 35894754  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  35894755 ttaagttaactctcaca 35894771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 2735997 - 2735858
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||    | || |  |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  2735997 accatcgtggcgcgatgaggcttcatcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 2735898  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  2735897 cacgatactccagatttctgattttaagttaactctcaca 2735858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 39679837 - 39679698
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| | ||| ||||||||||||||||||    | || || |||||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  39679837 accatcgtggcgcaatgaggcttcatcgtggcacgaaaaatccagtatcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 39679738  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  39679737 cacgatgctccagatttctgattttaagttaactctcaca 39679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 45567201 - 45567062
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |  || ||   ||||||||||||||| ||||||||||||||||||||||||||||    
T  45567201 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtgg 45567102  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||| ||||||    
T  45567101 cacgatgctccagatttctgattttaagttaacgctcaca 45567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 17943304 - 17943210
Alignment:
Q  274 tagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  17943304 tagctgcctcatgatcttacttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 17943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 2740678 - 2740594
Alignment:
Q  284 agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  2740678 agaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 2740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 39686719 - 39686636
Alignment:
Q  285 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  39686719 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 39686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 17462171 - 17462088
Alignment:
Q  285 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  17462171 gaatcttgcttcatccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 17462088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 22712782 - 22712839
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712782 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 22712839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 35894527 - 35894584
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35894527 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 35894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 20050288 - 20050345
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20050288 tctataccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 20050345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 20055031 - 20055088
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20055031 tctataccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 20055088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 30478910 - 30478853
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30478910 tctaaactctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 30478853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 37171018 - 37171075
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37171018 tctaaaccctgtttttctacacactttatcatctgatacaaggtttatatttatagtg 37171075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 367
Target Start/End: Original strand, 37171140 - 37171283
Alignment:
Q  226 cgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcct-cagaatcttgcttcaacaatcgtggcgcgatgcttctccatc 324  Q
    |||||||||||| |||| | ||  | ||||||||||||| |||||||||  ||| || ||| |||||| |||||||||| |||| || ||||||||||||    
T  37171140 cgcaccatcgtgccacgttacgattccatcgtggcacgaatttttcaatgacttgcttcaggatcttgtttcaacaatcatggcacgttgcttctccatc 37171239  T
Q  325 gtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||  ||||||||| | || ||||||||||||||||||||    
T  37171240 gtggcacgtttctccagattccttattttaagttaactctcaca 37171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 12781487 - 12781543
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12781487 tctaaaccctgtttt-ctacacactttatcatctgatacaaggcttatatttatagtg 12781543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 5377835 - 5377948
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgat 349  Q
    |||||||||||||||||| |||| | || ||| ||||| ||||||||||||||||| | |||   ||||||||||| |||| ||||||||||||||||||    
T  5377835 catcgtggcacgatttttccaat-gattgctccagaattttgcttcaacaatcgtgacacgaaa-ttctccatcgtagcacgattctccagaattctgat 5377932  T
Q  350 tttaagttaactctca 365  Q
    ||||||||||||||||    
T  5377933 tttaagttaactctca 5377948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 38190913 - 38190857
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  38190913 tctaaaccctgtttt-ctacacactttatcatctgatacaagacttatatttatagtg 38190857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 27517905 - 27517964
Alignment:
Q  102 tctaaaccctgtttttctacac--actttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  27517905 tctaaaccctgtttttctacacacactttatcatttgatacaaggcttatatttatagtg 27517964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 38190735 - 38190649
Alignment:
Q  282 tcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| |||||| ||||||||||||||| || |||||||||||||||||||  ||||||| | | |||||||||| ||||||||||||    
T  38190735 tcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccatattcctgattttaaattaactctcaca 38190649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 17943442 - 17943397
Alignment:
Q  114 ttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  17943442 ttttctacacaccttatcatctgatacaaggcttatatttatagtg 17943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 322 - 367
Target Start/End: Original strand, 45280457 - 45280503
Alignment:
Q  322 atcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  45280457 atcgtggcacgattctccagaattctgattttaagttaactctcaca 45280503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 17932548 - 17932493
Alignment:
Q  104 taaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  17932548 taaaccctgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 17932493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 2736123 - 2736066
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  2736123 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 2736066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 2740859 - 2740802
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  2740859 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 2740802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 17462354 - 17462297
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  17462354 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 17462297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 22717491 - 22717548
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  22717491 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 22717548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 33674671 - 33674713
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaag 143  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  33674671 tctaaaccctgtttttctacacacttttatcatctgatacaag 33674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 39686901 - 39686844
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  39686901 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 39686844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 45567327 - 45567270
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  45567327 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 45567270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 39679961 - 39679906
Alignment:
Q  104 taaaccctgtttttctacacacttt-atcatctgatacaaggcttatatttatagtg 159  Q
    |||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  39679961 taaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 39679906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 366
Target Start/End: Complemental strand, 17932373 - 17932328
Alignment:
Q  322 atcgtggcac-attctccagaattctgattttaagttaactctcac 366  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||    
T  17932373 atcgtggcacgattcttcagatttctgattttaagttaactctcac 17932328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 2298389 - 2298528
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  |||||| ||| ||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2298389 accatcgtggcacgacacggctttatcatggtacgatttttccagtagcttcctcagaatcttgcttcaacagtcgtggcgcgatgcttctccatcgtgg 2298488  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| || ||||||| |||||||||||||||||||||||||    
T  2298489 cacgatactccagatttctgattttaagttaactctcaca 2298528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 42238101 - 42237954
Alignment:
Q  221 tcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctc 320  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||| || |  || | ||| ||||||||||||||||||||||| || ||||||||    
T  42238101 tcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcaaaatcttgcttcaacaatcgtggcacgttgcttctc 42238002  T
Q  321 catcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  42238001 catcgtggcacgattctccagatttctgattttaagttaactctcaca 42237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 25452285 - 25452146
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  |||||||||||||||||||  ||| || ||||||||   ||||||||||||| ||||||||||||||||||||||||||||||    
T  25452285 accatcgtggcacgacacggcttcatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcatcaatcgtggcgcgatgcttctccatcgtgg 25452186  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||| | |||| ||||||||||||||||||||    
T  25452185 cacgattctccatatttctaattttaagttaactctcaca 25452146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 40222561 - 40222414
Alignment:
Q  221 tcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctc 320  Q
    ||||||| ||||||||| |||| ||||  |||||||||||||||||||| |  |  || | ||||||||||||||||||||||||||| || ||||||||    
T  40222561 tcaatcgtaccatcgtgccacgttgcgatttcatcgtggcacgatttttcctgtgactgcttcagaatcttgcttcaacaatcgtggcacgttgcttctc 40222462  T
Q  321 catcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  40222461 catcgtggcacgattctccagatttctgattttaagttaactctcaca 40222414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 217 - 368
Target Start/End: Original strand, 10529487 - 10529639
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    ||||||||||||| |||||||||||||| ||   | ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  10529487 atcttcaatcgcatcatcgtggcacgattcgatctaatcgtggcacgatttttccagt-gattgctctagaattttgcttcaacaatcgtggcacgaagc 10529585  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10529586 ttctcgatcgtggcacgattctccagaattctgattttaagttaactctcacac 10529639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 1240229 - 1240078
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    ||||||||| |||||||||||||||||| ||     ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  1240229 atcttcaattgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagc 1240131  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1240130 ttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 6747195 - 6747044
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||||||||||| ||     |||||||||||| |||| || | | || ||| ||||| ||||||||||||||||||| ||| ||    
T  6747195 atcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgacttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagc 6747097  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6747096 ttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 6747044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 22672620 - 22672504
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || || || ||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||| |||    
T  22672620 catcgtggcacgaaatttccagtaactccctcagaatcttgcttcaacaattgtggcgcaatgcttttccatcgtggcacgattctccagaattctaatt 22672521  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  22672520 ttaagttaactctcaca 22672504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 35385846 - 35385962
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||||    
T  35385846 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgatt 35385945  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  35385946 ttaagttaactctcaca 35385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 217 - 368
Target Start/End: Complemental strand, 6744952 - 6744800
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    |||||||||||||||||||| ||||||| ||     ||||||||||||||||| || | | || ||| ||||| ||||||||||||||||||| ||| |     
T  6744952 atcttcaatcgcaccatcgtagcacgattcgatccaatcgtggcacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaagt 6744854  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctcacac 368  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  6744853 ttctccatcgtggcacgattctccagaattctgattttaaattaactctcacac 6744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 361
Target Start/End: Complemental strand, 1170603 - 1170470
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||| ||||| ||||||||||||||||||  |||||| |  || ||   ||||||||||||| | || |||||||||||||||||||||||||    
T  1170603 accatcgtggcgcgatgaggcttcatcgtggcacgaaattttcagtgtctgcccaggaatcttgcttcagccattgtggcgcgatgcttctccatcgtgg 1170504  T
Q  329 cac-attctccagaattctgattttaagttaact 361  Q
    ||| || ||||||| |||||||||||||||||||    
T  1170503 cacgatgctccagatttctgattttaagttaact 1170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 1240344 - 1240288
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240344 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagt 1240288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 25445302 - 25445219
Alignment:
Q  285 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||| |||| ||||||||||||||||||||    
T  25445302 gaatcttgcttcatcaatcgtggcgcgatgcttctccatcatggtacgattctccagatttctaattttaagttaactctcaca 25445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 22672750 - 22672693
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22672750 tctaaaccctgtttttctacacactttatcatctgatacaaggcttctatttatagtg 22672693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 40222679 - 40222622
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40222679 tctaaaccttgtttttctacacactttatcatctgatacaaggcttatatttatagtg 40222622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 217 - 365
Target Start/End: Complemental strand, 39854375 - 39854226
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgc 315  Q
    ||||||||||||||||||||| |||||||||  |  | |||| |||||||||| || | | || ||| ||||| ||||||||||||||||||| |||  |    
T  39854375 atcttcaatcgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagt-gattgctccagaattttgcttcaacaatcgtggcacgaaac 39854277  T
Q  316 ttctccatcgtggcac-attctccagaattctgattttaagttaactctca 365  Q
    ||||| ||| || ||| ||||||||||||||| ||||||||||||||||||    
T  39854276 ttctctatcatgacacgattctccagaattctaattttaagttaactctca 39854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 4409882 - 4409797
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||| |||||||||||||||||| |||||    
T  4409882 cagaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaactctgattttaagttaactttcaca 4409797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 35385718 - 35385775
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35385718 tctaaactttgtttttctacacactttatcatttgatacaaggcttatatttatagtg 35385775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 42238219 - 42238163
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  42238219 tctaaaccctgtttttctacacactttatcat-tgatacaaggtttatatttatagtg 42238163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 17841516 - 17841572
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  17841516 tctaaaccctgtttt-ctacgcactttatcatccgatacaaggcttatatttatagtg 17841572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 1170729 - 1170673
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagt 158  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  1170729 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tatatttatagt 1170673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 10627278 - 10627222
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  10627278 tctaaaccctgtttt-ctacacacataataatctgatacaaggcttatatttatagtg 10627222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 2298267 - 2298324
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||| | |||||||||||    
T  2298267 tctaaaccttgtttttctacacacttttatcatatgatacaaggc-tgtatttatagtg 2298324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25452411 - 25452354
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||| | |||||||||||    
T  25452411 tctaaaccttgtttttctacacacttttatcatctaatacaaggc-tgtatttatagtg 25452354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 26406739 - 26406795
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| || |||| |||||||||| || |||||||||||    
T  26406739 tctaaaccctgtttt-ctacacacattttcatatgatacaaggtttctatttatagtg 26406795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 9521506 - 9521367
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||| |||||||||||||   |||||||||||||  ||| || ||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  9521506 accatcttggcacgatgcggggccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 9521407  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||||||||    
T  9521406 cacgattctccagatttctgattttaagttaactctcaca 9521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 21353741 - 21353858
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  21353741 catcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 21353840  T
Q  351 ttaagttaactctcacac 368  Q
    |||||||||||| |||||    
T  21353841 ttaagttaactcccacac 21353858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 248 - 367
Target Start/End: Complemental strand, 2232382 - 2232262
Alignment:
Q  248 gcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggca-cattctccagaattct 346  Q
    |||||||||||||||||||||| || ||||||||   ||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||| ||||    
T  2232382 gcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcatgatgctccagatttct 2232283  T
Q  347 gattttaagttaactctcaca 367  Q
    |||||||||||||||||||||    
T  2232282 gattttaagttaactctcaca 2232262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 9526256 - 9526117
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaa-tcttgcttcaacaatcgtggcgcgatgcttctccatcgtg 327  Q
    ||||||||||| ||||| ||||||||||||||||||  ||| || |  ||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  9526256 accatcgtggcgcgatgaggcttcatcgtggcacgaaatttccagtgtcttcc-cagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtg 9526158  T
Q  328 gcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||| || ||||||| |||||||||||||||||||||||||    
T  9526157 gcacgatgctccagatttctgattttaagttaactctcaca 9526117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 2393728 - 2393812
Alignment:
Q  284 agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  2393728 agaatcttgcttcaacaatcgtggcgtgaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2393812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 2617365 - 2617280
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2617365 cagaattttgcttcaacaatcgtggcacgaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 2617280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 2401642 - 2401726
Alignment:
Q  284 agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  2401642 agaatcttgcttcaacaatcgtggcgaaaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 9526382 - 9526325
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526382 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 9526325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 21353612 - 21353669
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21353612 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 21353669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 25133798 - 25133681
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctc-agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgat 349  Q
    |||||||||||||||||| ||||  ||| ||  || |||||||||||||||||||||| || ||||||||||||||| |||  ||||||||| | |||||    
T  25133798 catcgtggcacgatttttccaatgacttgctttaggatcttgcttcaacaatcgtggcacgttgcttctccatcgtgacacgtttctccagattcctgat 25133699  T
Q  350 tttaagttaactctcaca 367  Q
    ||||||||||||||||||    
T  25133698 tttaagttaactctcaca 25133681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 23689313 - 23689384
Alignment:
Q  297 aacaatcgtggcgcgatgcttctccatcgtggca-cattctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| || ||||||||||||||||||||||    
T  23689313 aacaatcgtggcgcgatgcttctccatcgtggcatgattctctagatttttgattttaagttaactctcaca 23689384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 25133987 - 25133931
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  25133987 tctaaaccctgtttt-ctacacattttatcatctgatacaagacttatatttatagtg 25133931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 2232515 - 2232458
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  2232515 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 2232458  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 9521631 - 9521574
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  9521631 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 9521574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 2393575 - 2393604
Alignment:
Q  130 tcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||    
T  2393575 tcatctgatacaaggcttatatttatagtg 2393604  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 2401489 - 2401518
Alignment:
Q  130 tcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||    
T  2401489 tcatctgatacaaggcttatatttatagtg 2401518  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 3091373 - 3091428
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||| |||||||| |  ||||||||||||||| ||||||||||||||    
T  3091373 tctaaaccctgtttt-ctacacacatattcatctgatacaagg-ttatatttatagtg 3091428  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 4144979 - 4145023
Alignment:
Q  115 tttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| || | |||||||||||||||| ||||||||||||||    
T  4144979 tttctacatacataatcatctgatacaaggtttatatttatagtg 4145023  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 20291328 - 20291280
Alignment:
Q  320 ccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  20291328 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 20291280  T

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Target: scaffold0131 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 229 - 365
Target Start/End: Complemental strand, 30932 - 30795
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    |||||||||||||||  | |||||||||||||||||||||| || ||||||||   ||||||||||||||| ||| ||||||||||||||||||||||||    
T  30932 accatcgtggcacgaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcctggcgcgatgcttctccatcgtgg 30833  T
Q  329 cac-attctccagaattctgattttaagttaactctca 365  Q
    ||| || ||||||| |||||||||||||||||||||||    
T  30832 cacgatgctccagatttctgattttaagttaactctca 30795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 31059 - 31002
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  31059 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 31002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 229 - 367
Target Start/End: Complemental strand, 16115 - 15976
Alignment:
Q  229 accatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 328  Q
    ||||||||||||||||||||   |||||||||||||  |||  | ||||||||   ||| ||||||||||||||||||||||||||||||||||||||||    
T  16115 accatcgtggcacgatgcggggccatcgtggcacgaaatttctagtagcttcccaggaagcttgcttcaacaatcgtggcgcgatgcttctccatcgtgg 16016  T
Q  329 cac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||| |||||||||| |||||||||||||||||||||||||    
T  16015 cacgattctccagatttctgattttaagttaactctcaca 15976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 16241 - 16184
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  16241 tctaaaccctgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 16184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 1224 - 1108
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    ||||||||||| |  ||| || ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  1224 catcgtggcacaaaatttccagtagcttcccaagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 1125  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  1124 ttaagttaactctcaca 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 1352 - 1307
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggct 146  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  1352 tctaaaccttgtttttctacacacttttatcatctgatacaaggct 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 188637 - 188754
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  |||  | ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||    
T  188637 catcgtggcacgaaatttctagtagtttcctcataatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagcacgattctccagatttctaatt 188736  T
Q  351 ttaagttaactctcacac 368  Q
    ||||||||||||||||||    
T  188737 ttaagttaactctcacac 188754  T

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Target: scaffold0004; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 188508 - 188565
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  188508 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 188565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 252 - 367
Target Start/End: Original strand, 17380 - 17496
Alignment:
Q  252 catcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    |||||||||||||  ||| || ||||||||   |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||||    
T  17380 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctctatcgtggcacgatactccagatttctgatt 17479  T
Q  351 ttaagttaactctcaca 367  Q
    |||||||||||||||||    
T  17480 ttaagttaactctcaca 17496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 17252 - 17309
Alignment:
Q  102 tctaaaccctgtttttctacacactttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17252 tctaaaccctgtttttctacactctttatcatctgatacaaggcttatatttatagtg 17309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 367
Target Start/End: Original strand, 41872 - 42022
Alignment:
Q  217 atcttcaatcgcaccatcgtggcacgatgcggcttcatcgtggcacgattttttcaatagcttcctcagaatcttgcttcaacaatcgtggcgcgatgct 316  Q
    |||||||||||||| ||||||||||||| ||     ||||||||||||||||| || | | || | |||||  ||||| ||||||||||||| ||| |||    
T  41872 atcttcaatcgcactatcgtggcacgattcgatacaatcgtggcacgatttttccagt-gtttgcccagaactttgctccaacaatcgtggcacgaagct 41970  T
Q  317 tctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  41971 tctccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 42022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 1264 - 1349
Alignment:
Q  283 cagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgattttaagttaactctcaca 367  Q
    |||||| ||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1264 cagaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 224576 - 224510
Alignment:
Q  285 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcac-attctccagaattctgatt 350  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  224576 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 224510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 224737 - 224680
Alignment:
Q  102 tctaaaccctgtttttctacacac-tttatcatctgatacaaggcttatatttatagtg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  224737 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtg 224680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 120601 - 120569
Alignment:
Q  335 ctccagaattctgattttaagttaactctcaca 367  Q
    ||||||| |||||||||||||||||||||||||    
T  120601 ctccagatttctgattttaagttaactctcaca 120569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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