View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0928_low_302 (Length: 208)

Name: NF0928_low_302
Description: NF0928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0928_low_302
NF0928_low_302
[»] chr6 (13 HSPs)
chr6 (1-96)||(4200439-4200534)
chr6 (1-96)||(31067591-31067686)
chr6 (1-96)||(30385071-30385164)
chr6 (1-96)||(31895794-31895899)
chr6 (1-96)||(34759052-34759157)
chr6 (1-96)||(7497174-7497278)
chr6 (1-96)||(14262435-14262540)
chr6 (1-92)||(34773507-34773608)
chr6 (1-45)||(7051943-7051987)
chr6 (1-43)||(2300803-2300845)
chr6 (1-43)||(6197543-6197585)
chr6 (1-41)||(29076697-29076737)
chr6 (1-41)||(29111671-29111711)
[»] chr5 (18 HSPs)
chr5 (1-96)||(1461150-1461245)
chr5 (1-96)||(5949207-5949302)
chr5 (1-96)||(4240464-4240559)
chr5 (1-96)||(40013714-40013809)
chr5 (5-96)||(14000107-14000208)
chr5 (1-92)||(22746396-22746489)
chr5 (1-96)||(39852444-39852549)
chr5 (1-94)||(7947577-7947680)
chr5 (1-96)||(4550259-4550364)
chr5 (1-96)||(13926030-13926135)
chr5 (1-92)||(1152109-1152210)
chr5 (36-96)||(37014038-37014098)
chr5 (1-43)||(849246-849288)
chr5 (1-43)||(7016804-7016846)
chr5 (1-92)||(21147166-21147267)
chr5 (5-43)||(27459015-27459053)
chr5 (1-43)||(32157962-32158004)
chr5 (1-43)||(33656106-33656148)
[»] chr8 (28 HSPs)
chr8 (1-96)||(16362295-16362390)
chr8 (6-96)||(37857223-37857313)
chr8 (1-96)||(18305973-18306068)
chr8 (5-96)||(7466438-7466529)
chr8 (1-96)||(32497624-32497719)
chr8 (1-96)||(42305797-42305892)
chr8 (1-96)||(9288459-9288564)
chr8 (1-96)||(10295382-10295488)
chr8 (5-96)||(14782137-14782238)
chr8 (1-96)||(39467470-39467575)
chr8 (5-96)||(44725812-44725913)
chr8 (1-96)||(43166692-43166797)
chr8 (36-96)||(19717883-19717943)
chr8 (1-93)||(4403206-4403308)
chr8 (1-96)||(18958729-18958834)
chr8 (36-96)||(31623819-31623879)
chr8 (1-92)||(41479196-41479287)
chr8 (1-92)||(43959756-43959847)
chr8 (1-82)||(4031294-4031365)
chr8 (1-96)||(26856166-26856271)
chr8 (24-93)||(39189821-39189889)
chr8 (1-89)||(10392246-10392344)
chr8 (1-32)||(31623794-31623825)
chr8 (1-43)||(24501878-24501920)
chr8 (1-43)||(26374495-26374537)
chr8 (1-92)||(42937450-42937551)
chr8 (1-43)||(42938182-42938224)
chr8 (1-45)||(13478313-13478357)
[»] chr7 (50 HSPs)
chr7 (1-96)||(40460719-40460814)
chr7 (1-96)||(44121912-44122007)
chr7 (1-96)||(509749-509844)
chr7 (5-96)||(29585611-29585702)
chr7 (1-96)||(37328020-37328115)
chr7 (9-96)||(46405443-46405530)
chr7 (1-96)||(23101391-23101496)
chr7 (1-96)||(28342440-28342545)
chr7 (1-96)||(29614766-29614871)
chr7 (1-96)||(39784192-39784297)
chr7 (2-96)||(8675427-8675531)
chr7 (1-89)||(33892269-33892357)
chr7 (4-96)||(39028193-39028285)
chr7 (1-96)||(3023019-3023124)
chr7 (1-96)||(28034807-28034912)
chr7 (1-93)||(19251632-19251724)
chr7 (36-95)||(47066822-47066881)
chr7 (1-96)||(7993235-7993340)
chr7 (1-96)||(18838482-18838587)
chr7 (1-96)||(37972869-37972974)
chr7 (1-89)||(33382730-33382828)
chr7 (5-96)||(41827401-41827502)
chr7 (4-92)||(9179976-9180064)
chr7 (1-94)||(17001047-17001130)
chr7 (9-96)||(19810900-19810987)
chr7 (1-96)||(9882239-9882343)
chr7 (1-92)||(12740466-12740566)
chr7 (1-92)||(973284-973385)
chr7 (1-92)||(7718368-7718469)
chr7 (1-43)||(12963794-12963836)
chr7 (27-96)||(44256768-44256837)
chr7 (1-41)||(10676487-10676527)
chr7 (24-92)||(12893541-12893609)
chr7 (1-45)||(40996712-40996756)
chr7 (1-32)||(47066797-47066828)
chr7 (1-79)||(727613-727691)
chr7 (1-43)||(7113552-7113594)
chr7 (1-43)||(20275328-20275370)
chr7 (1-43)||(30440896-30440938)
chr7 (1-43)||(34009113-34009155)
chr7 (1-92)||(34695373-34695474)
chr7 (1-43)||(43581155-43581197)
chr7 (1-43)||(43679514-43679556)
chr7 (1-43)||(44343461-44343503)
chr7 (1-92)||(47914366-47914467)
chr7 (1-46)||(31638975-31639020)
chr7 (36-89)||(43187366-43187419)
chr7 (5-92)||(3797073-3797160)
chr7 (36-92)||(7719266-7719322)
chr7 (36-92)||(18914741-18914797)
[»] chr4 (44 HSPs)
chr4 (1-96)||(23987312-23987407)
chr4 (1-96)||(30967312-30967407)
chr4 (5-96)||(50018353-50018444)
chr4 (1-96)||(5800076-5800171)
chr4 (1-96)||(5441502-5441607)
chr4 (1-96)||(27768154-27768259)
chr4 (1-96)||(54341242-54341347)
chr4 (1-96)||(54853471-54853576)
chr4 (1-92)||(28483997-28484087)
chr4 (1-96)||(36479245-36479339)
chr4 (1-96)||(37828405-37828510)
chr4 (5-96)||(48261229-48261330)
chr4 (1-96)||(49501522-49501619)
chr4 (1-96)||(49507587-49507684)
chr4 (1-96)||(51321019-51321124)
chr4 (36-93)||(41725265-41725322)
chr4 (5-93)||(12913326-12913414)
chr4 (1-96)||(32684011-32684096)
chr4 (1-92)||(40537167-40537258)
chr4 (1-96)||(49834836-49834921)
chr4 (1-92)||(31314749-31314840)
chr4 (1-96)||(56445358-56445453)
chr4 (1-96)||(32322189-32322294)
chr4 (1-96)||(37915925-37916030)
chr4 (24-93)||(24736466-24736535)
chr4 (1-43)||(19740974-19741016)
chr4 (1-43)||(29649733-29649775)
chr4 (36-96)||(8712009-8712069)
chr4 (1-43)||(1044905-1044947)
chr4 (1-43)||(7249831-7249873)
chr4 (1-43)||(9163174-9163216)
chr4 (1-43)||(25504705-25504747)
chr4 (1-43)||(37046517-37046559)
chr4 (1-43)||(41320908-41320950)
chr4 (1-43)||(41881148-41881190)
chr4 (5-43)||(44770919-44770957)
chr4 (36-92)||(3436736-3436792)
chr4 (37-93)||(12113089-12113145)
chr4 (36-92)||(25331274-25331330)
chr4 (36-92)||(32950843-32950899)
chr4 (36-92)||(34228590-34228646)
chr4 (1-45)||(34228647-34228691)
chr4 (36-76)||(36727972-36728012)
chr4 (36-92)||(55302986-55303042)
[»] chr3 (48 HSPs)
chr3 (5-96)||(10728654-10728745)
chr3 (1-96)||(50762063-50762158)
chr3 (1-94)||(39038138-39038231)
chr3 (1-93)||(39842500-39842592)
chr3 (1-96)||(37454959-37455054)
chr3 (1-96)||(34484033-34484138)
chr3 (1-96)||(18749710-18749815)
chr3 (1-96)||(32580274-32580379)
chr3 (1-94)||(40897242-40897345)
chr3 (1-59)||(10660633-10660691)
chr3 (1-96)||(11431624-11431729)
chr3 (1-96)||(17946386-17946491)
chr3 (5-96)||(36674133-36674234)
chr3 (1-96)||(44906516-44906621)
chr3 (36-96)||(45862984-45863044)
chr3 (36-96)||(52810521-52810581)
chr3 (1-96)||(26107359-26107464)
chr3 (7-89)||(44276489-44276571)
chr3 (5-96)||(50903243-50903344)
chr3 (1-96)||(54628942-54629047)
chr3 (1-96)||(23753410-23753494)
chr3 (1-96)||(48379255-48379360)
chr3 (36-96)||(31646289-31646347)
chr3 (1-92)||(27899442-27899533)
chr3 (5-43)||(5825164-5825202)
chr3 (14-96)||(15492870-15492952)
chr3 (5-88)||(20833094-20833187)
chr3 (1-43)||(51737792-51737834)
chr3 (1-43)||(52618031-52618073)
chr3 (5-43)||(1439960-1439998)
chr3 (1-92)||(3206212-3206313)
chr3 (1-43)||(996152-996194)
chr3 (1-43)||(3999711-3999753)
chr3 (1-43)||(10139212-10139254)
chr3 (1-92)||(19253925-19254026)
chr3 (1-92)||(20498307-20498408)
chr3 (1-43)||(29448924-29448966)
chr3 (1-43)||(33807864-33807906)
chr3 (1-43)||(35337833-35337875)
chr3 (1-43)||(37820543-37820585)
chr3 (1-43)||(44762103-44762145)
chr3 (1-43)||(52114627-52114669)
chr3 (1-43)||(54625690-54625732)
chr3 (1-34)||(539479-539512)
chr3 (1-42)||(33996608-33996649)
chr3 (36-92)||(6131240-6131296)
chr3 (36-92)||(6589707-6589763)
chr3 (1-41)||(55235282-55235322)
[»] chr2 (29 HSPs)
chr2 (5-96)||(379041-379132)
chr2 (1-96)||(3463772-3463867)
chr2 (1-96)||(28740298-28740393)
chr2 (5-96)||(13833437-13833528)
chr2 (1-72)||(7026704-7026775)
chr2 (36-94)||(6224574-6224632)
chr2 (1-96)||(25288259-25288364)
chr2 (1-96)||(10657506-10657611)
chr2 (1-96)||(18177367-18177472)
chr2 (1-96)||(28844655-28844760)
chr2 (1-96)||(33135723-33135827)
chr2 (1-92)||(10125309-10125400)
chr2 (36-96)||(215243-215302)
chr2 (36-96)||(3574972-3575032)
chr2 (5-96)||(26788890-26788988)
chr2 (1-96)||(43078663-43078768)
chr2 (55-96)||(7027051-7027092)
chr2 (1-32)||(3574947-3574978)
chr2 (1-43)||(1789542-1789584)
chr2 (1-43)||(14198645-14198687)
chr2 (1-92)||(16269791-16269892)
chr2 (1-92)||(20605336-20605437)
chr2 (1-92)||(24776455-24776556)
chr2 (1-43)||(32125353-32125395)
chr2 (1-43)||(35317162-35317204)
chr2 (6-43)||(9120231-9120268)
chr2 (24-92)||(305474-305542)
chr2 (36-92)||(12407525-12407581)
chr2 (36-92)||(31170633-31170689)
[»] chr1 (33 HSPs)
chr1 (1-96)||(38536102-38536197)
chr1 (1-96)||(38558320-38558415)
chr1 (5-96)||(29219382-29219473)
chr1 (1-96)||(45272678-45272772)
chr1 (1-89)||(48668795-48668883)
chr1 (1-96)||(6312666-6312771)
chr1 (1-96)||(29396391-29396496)
chr1 (1-96)||(48177465-48177570)
chr1 (1-96)||(51701672-51701777)
chr1 (6-96)||(15835056-15835156)
chr1 (36-96)||(9322503-9322563)
chr1 (1-88)||(5495117-5495204)
chr1 (1-96)||(25612249-25612354)
chr1 (1-96)||(28387396-28387501)
chr1 (36-96)||(18798608-18798668)
chr1 (1-91)||(46328134-46328234)
chr1 (5-93)||(9577438-9577536)
chr1 (1-32)||(18798583-18798614)
chr1 (1-55)||(955842-955896)
chr1 (1-43)||(6304318-6304360)
chr1 (1-92)||(21222239-21222340)
chr1 (1-43)||(31572263-31572305)
chr1 (5-43)||(32589019-32589057)
chr1 (1-92)||(35279764-35279865)
chr1 (1-43)||(47654417-47654459)
chr1 (1-43)||(49198335-49198377)
chr1 (24-89)||(32588963-32589028)
chr1 (2-43)||(45760075-45760116)
chr1 (36-92)||(19451815-19451871)
chr1 (1-41)||(29556196-29556236)
chr1 (36-92)||(47780848-47780904)
chr1 (9-69)||(47784486-47784546)
chr1 (36-92)||(49418221-49418277)
[»] scaffold0306 (1 HSPs)
scaffold0306 (9-96)||(13989-14076)
[»] scaffold0152 (2 HSPs)
scaffold0152 (9-96)||(21251-21338)
scaffold0152 (14-96)||(28463-28546)
[»] scaffold0347 (1 HSPs)
scaffold0347 (10-92)||(14878-14960)
[»] scaffold0543 (1 HSPs)
scaffold0543 (36-96)||(10704-10764)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-96)||(36910-37015)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-96)||(58079-58184)
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-96)||(39620-39724)
[»] scaffold1504 (1 HSPs)
scaffold1504 (36-96)||(1007-1067)
[»] scaffold0037 (1 HSPs)
scaffold0037 (38-92)||(100357-100411)
[»] scaffold0839 (2 HSPs)
scaffold0839 (36-96)||(3695-3755)
scaffold0839 (3-43)||(3758-3798)
[»] scaffold0922 (1 HSPs)
scaffold0922 (5-39)||(4303-4337)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-43)||(15099-15141)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-43)||(15742-15784)
[»] scaffold0151 (1 HSPs)
scaffold0151 (36-92)||(38612-38668)


Alignment Details
Target: chr6 (Bit Score: 84; Significance: 4e-40; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4200534 - 4200439
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  4200534 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 4200439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31067591 - 31067686
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  31067591 tttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaga 31067686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30385164 - 30385071
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  30385164 tttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaac--aaagtctttcatgaaaagatgagatttcttgaga 30385071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31895794 - 31895899
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  31895794 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 31895893  T
Q  91 ttgaga 96  Q
    ||||||    
T  31895894 ttgaga 31895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34759157 - 34759052
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||||||||||||||||||||||||||||    
T  34759157 tttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 34759058  T
Q  91 ttgaga 96  Q
    ||||||    
T  34759057 ttgaga 34759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7497174 - 7497278
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt---------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttct 91  Q
    |||||||||| ||||||||||||||||||||||| ||||         |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  7497174 tttcgaaggagtgtttaataaattggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 7497273  T
Q  92 tgaga 96  Q
    |||||    
T  7497274 tgaga 7497278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 14262540 - 14262435
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  14262540 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttc 14262441  T
Q  91 ttgaga 96  Q
    ||||||    
T  14262440 ttgaga 14262435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34773507 - 34773608
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  34773507 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 34773606  T
Q  91 tt 92  Q
    ||    
T  34773607 tt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7051943 - 7051987
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag 45  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  7051943 tttcgaaggattgtttaataaattggattttgatggattttgtag 7051987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2300845 - 2300803
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  2300845 tttcgaaggattgtttaataaataagattttgatggattttgt 2300803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6197585 - 6197543
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  6197585 tttcgaaggattgtttaataaatcagattttgatggattttgt 6197543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29076697 - 29076737
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt 41  Q
    |||||||||||||||||||||||  ||||||||| ||||||    
T  29076697 tttcgaaggattgtttaataaatcagattttgatggatttt 29076737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29111671 - 29111711
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt 41  Q
    |||||||||||||||||||||||  ||||||||| ||||||    
T  29111671 tttcgaaggattgtttaataaatcagattttgatggatttt 29111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1461245 - 1461150
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1461245 tttcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgaga 1461150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5949207 - 5949302
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  5949207 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 5949302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4240559 - 4240464
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  4240559 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgaga 4240464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40013809 - 40013714
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  40013809 tttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 40013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 14000208 - 14000107
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14000208 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 14000109  T
Q  95 ga 96  Q
    ||    
T  14000108 ga 14000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22746396 - 22746489
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag--tgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    ||||||| ||||||||||||||||| |||||||| |||||||| |  |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  22746396 tttcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagataagatttctt 22746489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39852444 - 39852549
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||| |||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  39852444 tttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 39852543  T
Q  91 ttgaga 96  Q
    ||||||    
T  39852544 ttgaga 39852549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7947680 - 7947577
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  7947680 tttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttc 7947581  T
Q  91 ttga 94  Q
    ||||    
T  7947580 ttga 7947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4550364 - 4550259
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||| | |||||||||||||||||||||||     
T  4550364 tttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttg 4550265  T
Q  91 ttgaga 96  Q
    ||||||    
T  4550264 ttgaga 4550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13926030 - 13926135
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||| |||||||||| |||||    
T  13926030 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttc 13926129  T
Q  91 ttgaga 96  Q
    ||||||    
T  13926130 ttgaga 13926135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1152210 - 1152109
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||| ||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1152210 tttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttc 1152111  T
Q  91 tt 92  Q
    ||    
T  1152110 tt 1152109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 37014038 - 37014098
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  37014038 gattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgaga 37014098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 849246 - 849288
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  849246 tttcgaaggattgtttaataaatcagattttgatagattttgt 849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7016846 - 7016804
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  7016846 tttcgaaggattgtttaataaatcagattttgatggattttgt 7016804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21147166 - 21147267
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  21147166 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 21147265  T
Q  91 tt 92  Q
    ||    
T  21147266 tt 21147267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 27459053 - 27459015
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  27459053 gaaggattgtttaataaattagattttgatggattttgt 27459015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32158004 - 32157962
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  32158004 tttcgaaggattgtttaataaattagattttgacggattttgt 32157962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33656148 - 33656106
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  33656148 tttcgaaggattgtttaataaatcagattttgatggattttgt 33656106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16362295 - 16362390
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||    
T  16362295 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgaga 16362390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 37857223 - 37857313
Alignment:
Q  6 aaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37857223 aaggattgtttaataaattggattttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgaga 37857313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18306068 - 18305973
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  18306068 tttcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 18305973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 7466438 - 7466529
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| |||||||||||||||||||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  7466438 gaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 7466529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32497624 - 32497719
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  32497624 tttcgaatgattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgaga 32497719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 42305892 - 42305797
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||| || |||||||||| ||||||||||||||||    
T  42305892 tttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgaga 42305797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9288564 - 9288459
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgata----------gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  9288564 tttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 9288465  T
Q  91 ttgaga 96  Q
    ||||||    
T  9288464 ttgaga 9288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 10295488 - 10295382
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt-----------gtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    |||||||||||||||||||||||||||||||||| ||||||           |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  10295488 tttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 10295389  T
Q  90 cttgaga 96  Q
    |||||||    
T  10295388 cttgaga 10295382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 14782238 - 14782137
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14782238 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 14782139  T
Q  95 ga 96  Q
    ||    
T  14782138 ga 14782137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39467575 - 39467470
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt----------gtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||| |||||||| ||||||          |||||||||||||||||| |||||||||||||||||||||||||||||     
T  39467575 tttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttt 39467476  T
Q  91 ttgaga 96  Q
    ||||||    
T  39467475 ttgaga 39467470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 44725913 - 44725812
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  44725913 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 44725814  T
Q  95 ga 96  Q
    ||    
T  44725813 ga 44725812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 43166797 - 43166692
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag----------tgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| |||||||| |          |||||||||||||| ||||| | ||||||||||||||||||||||    
T  43166797 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 43166698  T
Q  91 ttgaga 96  Q
    ||||||    
T  43166697 ttgaga 43166692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 19717943 - 19717883
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  19717943 gattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttgaga 19717883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4403206 - 4403308
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||| ||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  4403206 tttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttc 4403305  T
Q  91 ttg 93  Q
    |||    
T  4403306 ttg 4403308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 18958834 - 18958729
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||||||||| || ||||||||          |||||||||||||||| ||||| |||||||||||||||| ||||||     
T  18958834 tttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagatttt 18958735  T
Q  91 ttgaga 96  Q
    ||||||    
T  18958734 ttgaga 18958729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 31623819 - 31623879
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  31623819 gattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgaga 31623879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 41479196 - 41479287
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    ||||||| |||||||||||||||  |||||||   |||||| ||||  ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  41479196 tttcgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttctt 41479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43959756 - 43959847
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    ||||||| |||||||||||||||  ||||||||| |||||||| ||| ||||||| ||  ||||| ||||| || |||| ||||||||||||    
T  43959756 tttcgaatgattgtttaataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttctt 43959847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4031365 - 4031294
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagat 82  Q
    ||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||||||||||||    
T  4031365 tttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26856166 - 26856271
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||| ||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| |||||||  |||| || |||||||    
T  26856166 tttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttc 26856265  T
Q  91 ttgaga 96  Q
    ||||||    
T  26856266 ttgaga 26856271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 39189889 - 39189821
Alignment:
Q  24 tggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    |||||||||||  ||||| ||||  ||||||||||| ||||||||||||||||||| |||||||||||||    
T  39189889 tggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatgagatttcttg 39189821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10392344 - 10392246
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttg----------tagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    |||||||||||||||||||||||  ||||||||| |||||||          ||||| ||||||| ||  ||||||||||||||||||| |||||||||    
T  10392344 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31623794 - 31623825
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  31623794 tttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24501920 - 24501878
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  24501920 tttcgaaggattgtttaataaatcagattttgatggattttgt 24501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26374537 - 26374495
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  26374537 tttcgaaggattgtttaataaataagattttgatggattttgt 26374495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42937450 - 42937551
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  42937450 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttc 42937549  T
Q  91 tt 92  Q
    ||    
T  42937550 tt 42937551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42938224 - 42938182
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  42938224 tttcgaaggattgtttaataaatcagattttgatggattttgt 42938182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13478357 - 13478313
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag 45  Q
    |||||||||||||||||||||||| ||||| | | ||||||||||    
T  13478357 tttcgaaggattgtttaataaattagatttcgttggattttgtag 13478313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40460814 - 40460719
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  40460814 tttcgaatgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgaga 40460719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44122007 - 44121912
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||    
T  44122007 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgaga 44121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 509749 - 509844
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  509749 tttcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 29585611 - 29585702
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||    
T  29585611 gaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgaga 29585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37328020 - 37328115
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||| |||||| ||||||    
T  37328020 tttcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagattttttgaga 37328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 46405530 - 46405443
Alignment:
Q  9 gattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| | ||| || |||||||||||||||||||||    
T  46405530 gattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgagatttcttgaga 46405443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23101391 - 23101496
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23101391 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 23101490  T
Q  91 ttgaga 96  Q
    ||||||    
T  23101491 ttgaga 23101496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28342440 - 28342545
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  28342440 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 28342539  T
Q  91 ttgaga 96  Q
    ||||||    
T  28342540 ttgaga 28342545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29614871 - 29614766
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29614871 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 29614772  T
Q  91 ttgaga 96  Q
    ||||||    
T  29614771 ttgaga 29614766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 39784192 - 39784297
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  39784192 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 39784291  T
Q  91 ttgaga 96  Q
    ||||||    
T  39784292 ttgaga 39784297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 8675427 - 8675531
Alignment:
Q  2 ttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttct 91  Q
    ||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  8675427 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttct 8675526  T
Q  92 tgaga 96  Q
    |||||    
T  8675527 tgaga 8675531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33892357 - 33892269
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    ||||||| ||||||| ||||||||||||||| ||  ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  33892357 tttcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 39028193 - 39028285
Alignment:
Q  4 cgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||||   ||||||||||||||    
T  39028193 cgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttcttgaga 39028285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3023019 - 3023124
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  3023019 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 3023118  T
Q  91 ttgaga 96  Q
    ||||||    
T  3023119 ttgaga 3023124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28034912 - 28034807
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  28034912 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttc 28034813  T
Q  91 ttgaga 96  Q
    ||||||    
T  28034812 ttgaga 28034807  T

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Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19251632 - 19251724
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||| ||||||| ||| ||||| |||||||||||||  ||| ||||||||    
T  19251632 tttcgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttg 19251724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 47066822 - 47066881
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgag 95  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  47066822 gattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7993235 - 7993340
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||| |||||||| ||||          |||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  7993235 tttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttc 7993334  T
Q  91 ttgaga 96  Q
    ||||||    
T  7993335 ttgaga 7993340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18838482 - 18838587
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| |||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  18838482 tttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 18838581  T
Q  91 ttgaga 96  Q
    ||||||    
T  18838582 ttgaga 18838587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37972974 - 37972869
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttg----------tagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||| ||||||||||||||||||||| |||||||          ||||||||||||||||| ||||| |||||||||||||||||||| |||    
T  37972974 tttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttc 37972875  T
Q  91 ttgaga 96  Q
    ||||||    
T  37972874 ttgaga 37972869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33382730 - 33382828
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  33382730 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 41827401 - 41827502
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||  ||||||||||||| ||||||||||||||    
T  41827401 gaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttga 41827500  T
Q  95 ga 96  Q
    ||    
T  41827501 ga 41827502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 9179976 - 9180064
Alignment:
Q  4 cgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||||||||||||||||||||   |||||| ||||| | ||||| ||  ||||| ||||||||||||| ||||||||||||    
T  9179976 cgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttctt 9180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17001130 - 17001047
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    ||||||||||||||||||||||||||||          |||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  17001130 tttcgaaggattgtttaataaattggat----------tttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttga 17001047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 19810900 - 19810987
Alignment:
Q  9 gattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||    ||||| ||||| ||||||| ||  ||||  ||||||||||||| ||||||||||||||||    
T  19810900 gattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgagatttcttgaga 19810987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9882343 - 9882239
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| |||||||||||||||||||||||||| ||||||||          ||||||||||||| || ||||| |||||||| |||| ||||||||||    
T  9882343 tttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttc 9882245  T
Q  91 ttgaga 96  Q
    ||||||    
T  9882244 ttgaga 9882239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12740466 - 12740566
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| |||||||||||||||||| |||||||||||||||||||          |||||||||||||||| | ||| |||||||| |||||||||||||||    
T  12740466 tttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttc 12740564  T
Q  91 tt 92  Q
    ||    
T  12740565 tt 12740566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 973284 - 973385
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||| ||||| ||||||||||||| ||||||||||    
T  973284 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttc 973383  T
Q  91 tt 92  Q
    ||    
T  973384 tt 973385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7718469 - 7718368
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||||||||||||||||| ||||||||||    
T  7718469 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttc 7718370  T
Q  91 tt 92  Q
    ||    
T  7718369 tt 7718368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12963794 - 12963836
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  12963794 tttcgaaggattgtttaataaattagattttgatggattttgt 12963836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 44256837 - 44256768
Alignment:
Q  27 attttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||| | ||||||| |||||||||||||||| ||||| | |||||| |||| ||||||||| ||||||    
T  44256837 attttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgaga 44256768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10676527 - 10676487
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt 41  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  10676527 tttcgaaggattgtttaataaattggatttggatggatttt 10676487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 12893541 - 12893609
Alignment:
Q  24 tggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||  ||||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  12893541 tggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 12893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40996756 - 40996712
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag 45  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||    
T  40996756 tttcgaaggattgtttaataaatcagattttgatggattttgtag 40996712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 47066797 - 47066828
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  47066797 tttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 727613 - 727691
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaa 79  Q
    |||| ||||||||||||||||||  |||||||   |||||| ||||| ||||||| ||  ||||| |||||||||||||    
T  727613 tttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7113552 - 7113594
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  7113552 tttcgcaggattgtttaataaatcagattttgatagattttgt 7113594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20275370 - 20275328
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  20275370 tttcgaaggattgtttaataaatcagattttgatggattttgt 20275328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30440896 - 30440938
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  30440896 tttcgaaggattgtttaataaatcagattttgatggattttgt 30440938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34009113 - 34009155
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  34009113 tttcgaaggattgtttaataaatcagattttgatggattttgt 34009155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34695373 - 34695474
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  34695373 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 34695472  T
Q  91 tt 92  Q
    ||    
T  34695473 tt 34695474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43581197 - 43581155
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  43581197 tttcgaaggattgtttaataaatcagattttgatggattttgt 43581155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43679514 - 43679556
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  43679514 tttcgaaggattgtttaataaatcagattttgatggattttgt 43679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44343503 - 44343461
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  44343503 tttcgaaggattgtttaataaatcagattttgatggattttgt 44343461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47914366 - 47914467
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  47914366 tttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 47914465  T
Q  91 tt 92  Q
    ||    
T  47914466 tt 47914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31638975 - 31639020
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagt 46  Q
    |||||||||||||||||||||||  ||||||||| |||||| ||||    
T  31638975 tttcgaaggattgtttaataaatcagattttgatggattttctagt 31639020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 43187419 - 43187366
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    |||||| ||||| ||||||||||| ||||| ||||||||||| | |||||||||    
T  43187419 gattttctagtgaaattttaacaagaaaaagtctttcatgaagacatgagattt 43187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 3797160 - 3797073
Alignment:
Q  5 gaaggattgtttaataaattggattttgat-agattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||||||||||| |||||||||  |||||| ||||| ||||||| ||  ||||| ||||| | ||||| || |||||||||    
T  3797160 gaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttctt 3797073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7719322 - 7719266
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  7719322 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 7719266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 18914797 - 18914741
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  18914797 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 18914741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23987312 - 23987407
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23987312 tttcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 23987407  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 30967407 - 30967312
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| |||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  30967407 tttcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgaga 30967312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 50018353 - 50018444
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  50018353 gaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgaga 50018444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5800076 - 5800171
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| |||||||||||||||||||||||||||  ||||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||| ||||||    
T  5800076 tttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagattttttgaga 5800171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5441502 - 5441607
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5441502 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 5441601  T
Q  91 ttgaga 96  Q
    ||||||    
T  5441602 ttgaga 5441607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27768154 - 27768259
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  27768154 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 27768253  T
Q  91 ttgaga 96  Q
    ||||||    
T  27768254 ttgaga 27768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54341242 - 54341347
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  54341242 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 54341341  T
Q  91 ttgaga 96  Q
    ||||||    
T  54341342 ttgaga 54341347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54853576 - 54853471
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||||||||||||||||||||||||||||    
T  54853576 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 54853477  T
Q  91 ttgaga 96  Q
    ||||||    
T  54853476 ttgaga 54853471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28483997 - 28484087
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||    
T  28483997 tttcgaaggattatttaataaattggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttctt 28484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36479339 - 36479245
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||| ||| ||||| ||||| ||||||| ||||||||||||||||    
T  36479339 tttcgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgaga 36479245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37828510 - 37828405
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          ||||||||||||| || ||||| ||||||||||||||||||||||||    
T  37828510 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttc 37828411  T
Q  91 ttgaga 96  Q
    ||||||    
T  37828410 ttgaga 37828405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 48261229 - 48261330
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48261229 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttga 48261328  T
Q  95 ga 96  Q
    ||    
T  48261329 ga 48261330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49501619 - 49501522
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttc--atgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||||||||||    ||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||||    
T  49501619 tttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgaga 49501522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49507684 - 49507587
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttc--atgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||||||||||    ||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||||    
T  49507684 tttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttgaga 49507587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51321019 - 51321124
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  51321019 tttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttc 51321118  T
Q  91 ttgaga 96  Q
    ||||||    
T  51321119 ttgaga 51321124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 41725265 - 41725322
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41725265 gattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttg 41725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 12913326 - 12913414
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    ||||||||||||||||||||||||||||   |||||| ||||| ||||||||||| ||||| | ||||||||| | |||||||||||||    
T  12913326 gaaggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttcttg 12913414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 32684096 - 32684011
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  32684096 tttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgaga 32684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40537258 - 40537167
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    ||||||| |||||||||||||||  ||||||||| |||||||| ||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  40537258 tttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 40537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 49834921 - 49834836
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||          ||||||||||||||||||||| || || |||||||| |||||||||||||||||||||    
T  49834921 tttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgaga 49834836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31314840 - 31314749
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||||||||||||||  |||||||   |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  31314840 tttcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 31314749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 56445453 - 56445358
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||||||||||   |||||| ||||| || |||| ||| ||||| |||||||| || | ||||||||||||||||    
T  56445453 tttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaagacatgagatttcttgaga 56445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32322189 - 32322294
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||| |||||||| ||||          ||||||||||||||||| || ||||  |||||||| |||||||||||||||    
T  32322189 tttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttc 32322288  T
Q  91 ttgaga 96  Q
    ||||||    
T  32322289 ttgaga 32322294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37915925 - 37916030
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgat----------agattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||||||||||||           |||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||     
T  37915925 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattta 37916024  T
Q  91 ttgaga 96  Q
    ||||||    
T  37916025 ttgaga 37916030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 24736466 - 24736535
Alignment:
Q  24 tggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    |||||||||  ||||||| ||||| ||||||||||| || || ||||||||||||| |||||||||||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttg 24736535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19741016 - 19740974
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  19741016 tttcgaaggattgtttaataaattagattttgatggattttgt 19740974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29649775 - 29649733
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  29649775 tttcgaaagattgtttaataaattggattttgatggattttgt 29649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 8712009 - 8712069
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||| ||||| ||||||| ||| ||||| |||||||| |||| ||||||||||||||||    
T  8712009 gattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgaga 8712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1044905 - 1044947
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  1044905 tttcgaaggattgtttaataaatcagattttgatggattttgt 1044947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7249873 - 7249831
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  7249873 tttcgaaggattgtttaataaatcagattttgatggattttgt 7249831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9163174 - 9163216
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  9163174 tttcgaaggattgtttaataaattaaattttgatggattttgt 9163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25504747 - 25504705
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  25504747 tttcgaaggattgtttaataaatcagattttgatggattttgt 25504705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37046559 - 37046517
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  37046559 tttcgaaggattgtttaataaatcagattttgatggattttgt 37046517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41320908 - 41320950
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  41320908 tttcgaaggattgtttaataaatcagattttgatggattttgt 41320950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41881190 - 41881148
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  41881190 tttcgaaggattgtttaataaatcagattttgatggattttgt 41881148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 44770957 - 44770919
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  44770957 gaaggattgtttaataaattggattttggtggattttgt 44770919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3436736 - 3436792
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||| ||||||||||  ||||| | ||||||||||| || |||||||||    
T  3436736 gattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 12113089 - 12113145
Alignment:
Q  37 attttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    ||||| ||||| ||||||| ||  ||||| ||||||||||||| |||||||||||||    
T  12113089 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttg 12113145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 25331274 - 25331330
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  25331274 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 25331330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 32950899 - 32950843
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  32950899 gattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttctt 32950843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 34228646 - 34228590
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  34228646 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 34228590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34228691 - 34228647
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtag 45  Q
    ||||||| |||||||||||||||  ||||||||| ||||||||||    
T  34228691 tttcgaatgattgtttaataaatcagattttgatggattttgtag 34228647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 36728012 - 36727972
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatga 76  Q
    |||||| ||||| ||||||||||| ||||||||||||||||    
T  36728012 gattttttagtgaaattttaacaagaaaaaatctttcatga 36727972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 55302986 - 55303042
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  55302986 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 55303042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 10728745 - 10728654
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  10728745 gaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 10728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50762158 - 50762063
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  50762158 tttcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 50762063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39038138 - 39038231
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  39038138 tttcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttga 39038231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39842592 - 39842500
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    |||||||| ||||||||||||||| ||||||||  ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  39842592 tttcgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 39842500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 37454959 - 37455054
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||| ||||||||||||||||| ||||||   |||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  37454959 tttcgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgaga 37455054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34484138 - 34484033
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||||||||||||||||||||||||||||    
T  34484138 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttc 34484039  T
Q  91 ttgaga 96  Q
    ||||||    
T  34484038 ttgaga 34484033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18749710 - 18749815
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18749710 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 18749809  T
Q  91 ttgaga 96  Q
    ||||||    
T  18749810 ttgaga 18749815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32580274 - 32580379
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  32580274 tttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 32580373  T
Q  91 ttgaga 96  Q
    ||||||    
T  32580374 ttgaga 32580379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40897242 - 40897345
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  40897242 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 40897341  T
Q  91 ttga 94  Q
    ||||    
T  40897342 ttga 40897345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10660633 - 10660691
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaa 59  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10660633 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaa 10660691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11431624 - 11431729
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||| | ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11431624 tttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 11431723  T
Q  91 ttgaga 96  Q
    ||||||    
T  11431724 ttgaga 11431729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17946386 - 17946491
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  17946386 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 17946485  T
Q  91 ttgaga 96  Q
    ||||||    
T  17946486 ttgaga 17946491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 36674234 - 36674133
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  36674234 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 36674135  T
Q  95 ga 96  Q
    ||    
T  36674134 ga 36674133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44906621 - 44906516
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgata----------gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  44906621 tttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttc 44906522  T
Q  91 ttgaga 96  Q
    ||||||    
T  44906521 ttgaga 44906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 45862984 - 45863044
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  45862984 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 45863044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 52810521 - 52810581
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52810521 gattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgaga 52810581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26107359 - 26107464
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| | |||||| |||||||||||||||    
T  26107359 tttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttc 26107458  T
Q  91 ttgaga 96  Q
    ||||||    
T  26107459 ttgaga 26107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 44276489 - 44276571
Alignment:
Q  7 aggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    ||||||||||||||||||||||||||   |||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  44276489 aggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattt 44276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 50903344 - 50903243
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  50903344 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttcttga 50903245  T
Q  95 ga 96  Q
    ||    
T  50903244 ga 50903243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 54628942 - 54629047
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  54628942 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttc 54629041  T
Q  91 ttgaga 96  Q
    ||||||    
T  54629042 ttgaga 54629047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23753494 - 23753410
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  23753494 tttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgaga 23753410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48379255 - 48379360
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||| |||||||| ||||          ||||||||||||||||| || ||||  |||||||||||||||| |||||||    
T  48379255 tttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttc 48379354  T
Q  91 ttgaga 96  Q
    ||||||    
T  48379355 ttgaga 48379360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 31646347 - 31646289
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||    
T  31646347 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttcttgaga 31646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27899442 - 27899533
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||||||||||||||  |||||||   |||||| ||||| ||||||| ||  ||||| ||||||||||||| |||| |||||||    
T  27899442 tttcgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 27899533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 5825164 - 5825202
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5825164 gaaggattgtttaataaattggattttgatagattttgt 5825202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 15492952 - 15492870
Alignment:
Q  14 tttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||   ||| || ||||| ||||||||||| |||||||||||||||||   || |||||||||||||    
T  15492952 tttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgaga 15492870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 20833094 - 20833187
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttg----------tagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatt 88  Q
    |||||||||||||||||||||||||||||| |||||||          ||||||||||||||||| ||||| | |||||||||||||| |||||    
T  20833094 gaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 51737834 - 51737792
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  51737834 tttcgaaggattgtttaataaattggattttgatggattttgt 51737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52618073 - 52618031
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  52618073 tttcgaaggattgtttaataaattggattttgatggattttgt 52618031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 1439998 - 1439960
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1439998 gaaggattgtttaataaattagattttgatagattttgt 1439960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3206313 - 3206212
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||| ||||| ||||||||||||| ||||||||||    
T  3206313 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttc 3206214  T
Q  91 tt 92  Q
    ||    
T  3206213 tt 3206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 996194 - 996152
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  996194 tttcgaaggattgtttaataaatcagattttgatggattttgt 996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3999753 - 3999711
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  3999753 tttcgaaggattgtttaataaatcagattttgatggattttgt 3999711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10139254 - 10139212
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  10139254 tttcgaaggattgtttaataaatcagattttgatggattttgt 10139212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19253925 - 19254026
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  19253925 tttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 19254024  T
Q  91 tt 92  Q
    ||    
T  19254025 tt 19254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20498307 - 20498408
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  20498307 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 20498406  T
Q  91 tt 92  Q
    ||    
T  20498407 tt 20498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29448966 - 29448924
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  29448966 tttcgaaggattgtttaataaatcagattttgatggattttgt 29448924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33807906 - 33807864
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  33807906 tttcgaaggattgtttaataaatcagattttgatggattttgt 33807864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35337833 - 35337875
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  35337833 tttcgaaggattgtttaataaatcagattttgatggattttgt 35337875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37820585 - 37820543
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  37820585 tttcgaaggattgtttaataaatcagattttgatggattttgt 37820543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44762145 - 44762103
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  44762145 tttcgaaggattgtttaataaatcagattttgatggattttgt 44762103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52114627 - 52114669
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  52114627 tttcgcaggattgtttaataaatcagattttgatagattttgt 52114669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54625690 - 54625732
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  54625690 tttcgaaggattgtttaataaatcagattttgatggattttgt 54625732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 539512 - 539479
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgat 34  Q
    |||||||||||| |||||||||||||||||||||    
T  539512 tttcgaaggattatttaataaattggattttgat 539479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33996649 - 33996608
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttg 42  Q
    |||||||||||||||||||||||  ||||||||| |||||||    
T  33996649 tttcgaaggattgtttaataaatcagattttgatggattttg 33996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 6131296 - 6131240
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  6131296 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 6589707 - 6589763
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  6589707 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6589763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 55235282 - 55235322
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt 41  Q
    ||||||| |||||||||||||||||| ||||||| ||||||    
T  55235282 tttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 379041 - 379132
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  379041 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttattgaga 379132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3463772 - 3463867
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  3463772 tttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgaga 3463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28740393 - 28740298
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  28740393 tttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaga 28740298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 13833528 - 13833437
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  13833528 gaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttcttgaga 13833437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7026704 - 7026775
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttc 72  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  7026704 tttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 6224632 - 6224574
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6224632 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 6224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25288259 - 25288364
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgata----------gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||| | ||  ||||||||||||||||||||||||    
T  25288259 tttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttc 25288358  T
Q  91 ttgaga 96  Q
    ||||||    
T  25288359 ttgaga 25288364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 10657506 - 10657611
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| |||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| | |||||||||||||||| |||||    
T  10657506 tttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttc 10657605  T
Q  91 ttgaga 96  Q
    ||||||    
T  10657606 ttgaga 10657611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18177367 - 18177472
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||| |||||||||||||| ||||          |||||||||||||||||||| ||||| ||||| || |||||||||||||||    
T  18177367 tttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttc 18177466  T
Q  91 ttgaga 96  Q
    ||||||    
T  18177467 ttgaga 18177472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28844655 - 28844760
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattt----------tgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||| ||||||||| |||||          |||||||||||||||| || ||||| |||||||| |||||||||||||||    
T  28844655 tttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttc 28844754  T
Q  91 ttgaga 96  Q
    ||||||    
T  28844755 ttgaga 28844760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 33135723 - 33135827
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| |||||||| |||| ||||||||||    
T  33135723 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttc 33135821  T
Q  91 ttgaga 96  Q
    ||||||    
T  33135822 ttgaga 33135827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10125400 - 10125309
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||| |||||||||||||||||||| ||||||   |||||| ||||| ||||||||||| ||||| |||||||| |||| | ||||||||||    
T  10125400 tttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttctt 10125309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 215302 - 215243
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||    
T  215302 gattttgtagtgtaattttaacag-aaaaagtctttcatgaaaagatgagatttcatgaga 215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 3574972 - 3575032
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||||| |||| | ||||| |||||||||||||||    
T  3574972 gattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgaga 3575032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 26788890 - 26788988
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttga 94  Q
    |||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||   |||||||||||||||||    
T  26788890 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgagatttcttga 26788986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43078663 - 43078768
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| ||||||||||||||||||||||| || ||||||||          |||||||||||||||  ||||| |||||||| ||||||| |||||||    
T  43078663 tttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaagataagatttc 43078762  T
Q  91 ttgaga 96  Q
    ||||||    
T  43078763 ttgaga 43078768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 7027051 - 7027092
Alignment:
Q  55 aacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgaga 7027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3574947 - 3574978
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3574947 tttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1789542 - 1789584
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  1789542 tttcgaaggattgtttaataaatcagattttgatggattttgt 1789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14198687 - 14198645
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  14198687 tttcgaaggattgtttaataaatcagattttgatggattttgt 14198645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16269791 - 16269892
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  16269791 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 16269890  T
Q  91 tt 92  Q
    ||    
T  16269891 tt 16269892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20605336 - 20605437
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  20605336 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 20605435  T
Q  91 tt 92  Q
    ||    
T  20605436 tt 20605437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24776455 - 24776556
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  24776455 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 24776554  T
Q  91 tt 92  Q
    ||    
T  24776555 tt 24776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32125353 - 32125395
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  32125353 tttcgaaggattgtttaataaatcagattttgatggattttgt 32125395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35317162 - 35317204
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  35317162 tttcgaaggattgtttaataaatcagattttgatggattttgt 35317204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 9120231 - 9120268
Alignment:
Q  6 aaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  9120231 aaggattgtttaataaattagattttgatggattttgt 9120268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 305542 - 305474
Alignment:
Q  24 tggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||  ||||||| ||||| |||||||  |  ||||| ||||||||||||| ||||||||||||    
T  305542 tggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttctt 305474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 12407525 - 12407581
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  12407525 gattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttctt 12407581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 31170689 - 31170633
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  31170689 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 31170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38536197 - 38536102
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38536197 tttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 38536102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38558415 - 38558320
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38558415 tttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 38558320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 29219382 - 29219473
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  29219382 gaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgaga 29219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45272678 - 45272772
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||    
T  45272678 tttcgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgaga 45272772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48668883 - 48668795
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    ||||||| ||||||||||||||||||||||||   |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  48668883 tttcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 48668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6312666 - 6312771
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6312666 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 6312765  T
Q  91 ttgaga 96  Q
    ||||||    
T  6312766 ttgaga 6312771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29396496 - 29396391
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29396496 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 29396397  T
Q  91 ttgaga 96  Q
    ||||||    
T  29396396 ttgaga 29396391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48177570 - 48177465
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| |||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  48177570 tttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 48177471  T
Q  91 ttgaga 96  Q
    ||||||    
T  48177470 ttgaga 48177465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 51701672 - 51701777
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||          |||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  51701672 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttt 51701771  T
Q  91 ttgaga 96  Q
    ||||||    
T  51701772 ttgaga 51701777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 15835156 - 15835056
Alignment:
Q  6 aaggattgtttaataaattggattttgatagatttt----------gtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgag 95  Q
    ||||||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  15835156 aaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 15835057  T
Q  96 a 96  Q
    |    
T  15835056 a 15835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 9322563 - 9322503
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  9322563 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 9322503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5495204 - 5495117
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatt 88  Q
    |||| ||||||| |||||||||||||||||||   |||||||||||||||||||||||| ||||| || || ||||||||||||||||    
T  5495204 tttcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 25612249 - 25612354
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||| ||||||||||||||||||||||||||||| ||||          ||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  25612249 tttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttc 25612348  T
Q  91 ttgaga 96  Q
    ||||||    
T  25612349 ttgaga 25612354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28387501 - 28387396
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||||||||||||| ||||||||          ||| |||||||||||| ||||| |||||||| |||||||||||||||    
T  28387501 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttc 28387402  T
Q  91 ttgaga 96  Q
    ||||||    
T  28387401 ttgaga 28387396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 18798608 - 18798668
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  18798608 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagaga 18798668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46328134 - 46328234
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||||||||||||||| |||||||||||||| ||||          |||||||||||||||||||| ||||| |||||||| ||||||| |||||||    
T  46328134 tttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttc 46328233  T
Q  91 t 91  Q
    |    
T  46328234 t 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 9577536 - 9577438
Alignment:
Q  5 gaaggattgtttaataaattggattttgat----------agattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttg 93  Q
    ||||||||||||||||||||||||||||||          ||||||| ||||| |||||||  |  ||||||||||||||||||| |||||||||||||    
T  9577536 gaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttg 9577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18798583 - 18798614
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  18798583 tttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 955842 - 955896
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgtagtgtaatttta 55  Q
    ||||||||| |||||||||||||  ||||||||| |||||| ||||| |||||||    
T  955842 tttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6304360 - 6304318
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  6304360 tttcgaaggattgtttaataaatcagattttgatggattttgt 6304318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21222239 - 21222340
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||||| ||  ||||| ||||||||||||| ||||||||||    
T  21222239 tttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 21222338  T
Q  91 tt 92  Q
    ||    
T  21222339 tt 21222340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31572305 - 31572263
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  31572305 tttcgaaggattgtttaataaatcagattttgatggattttgt 31572263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 32589057 - 32589019
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  32589057 gaaggattgtttaataaatcggattttgatggattttgt 32589019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35279764 - 35279865
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||||||||||||||||||  ||||||||| ||||||||          |||| ||||| ||||  ||||| ||||||||||||| ||||||||||    
T  35279764 tttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttc 35279863  T
Q  91 tt 92  Q
    ||    
T  35279864 tt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47654459 - 47654417
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  47654459 tttcgaaggattgtttaataaatcagattttgatggattttgt 47654417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49198377 - 49198335
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  49198377 tttcgaaggattgtttaataaatcagattttgatggattttgt 49198335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 32589028 - 32588963
Alignment:
Q  24 tggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagattt 89  Q
    |||||||||  ||||||| ||||| ||||||| ||  ||||| ||||||||||||| |||||||||    
T  32589028 tggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 45760116 - 45760075
Alignment:
Q  2 ttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||||||||||||||||||||  ||||||||| ||||||||    
T  45760116 ttcgaaggattgtttaataaatcagattttgatggattttgt 45760075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 19451871 - 19451815
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  19451871 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 19451815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29556196 - 29556236
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagatttt 41  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  29556196 tttcgaaagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 47780848 - 47780904
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||||||  ||||| | ||||||||||| ||||||||||||    
T  47780848 gattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttctt 47780904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 47784486 - 47784546
Alignment:
Q  9 gattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatct 69  Q
    ||||||||||||||||||||||||  ||||||| ||||  ||||||| ||  |||||||||    
T  47784486 gattgtttaataaattggattttgtgagattttctagttaaattttagcatgaaaaaatct 47784546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 49418221 - 49418277
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| || || ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  49418221 gattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 13989 - 14076
Alignment:
Q  9 gattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||||||||||||||||||||    
T  13989 gattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgaga 14076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 21338 - 21251
Alignment:
Q  9 gattgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||||||||||||||||||||    
T  21338 gattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgaga 21251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 28463 - 28546
Alignment:
Q  14 tttaataaattggattttgatagattttg-tagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||| || ||||| ||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgaga 28546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 14878 - 14960
Alignment:
Q  10 attgtttaataaattggattttgatagattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 10704 - 10764
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  10704 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 10764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37015 - 36910
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    |||||||| ||||||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| |||||||||||||||| |||||||    
T  37015 tttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttc 36916  T
Q  91 ttgaga 96  Q
    ||||||    
T  36915 ttgaga 36910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 58184 - 58079
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttc 90  Q
    ||||||| |||||||||||||||||||||||||| ||||||||          ||| |||||||||||| | ||||||||||||||||||||||||||||    
T  58184 tttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttc 58085  T
Q  91 ttgaga 96  Q
    ||||||    
T  58084 ttgaga 58079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 39724 - 39620
Alignment:
Q  2 ttcgaaggattgtttaataaattggattttgatagattttgt----------agtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttct 91  Q
    ||||||||||| ||||||||||||||||||||| ||||||||          |||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  39724 ttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttct 39625  T
Q  92 tgaga 96  Q
    |||||    
T  39624 tgaga 39620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1007 - 1067
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||| | ||||| |||||||| |||| ||||||||||||||||    
T  1007 gattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttgaga 1067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 100357 - 100411
Alignment:
Q  38 ttttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||| ||||| ||||||||||| ||||| ||||||||||||| ||||||||||||    
T  100357 ttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 3755 - 3695
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttcttgaga 96  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||| | |||| ||||||    
T  3755 gattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgaga 3695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3798 - 3758
Alignment:
Q  3 tcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgt 3758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 4303 - 4337
Alignment:
Q  5 gaaggattgtttaataaattggattttgatagatt 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  4303 gaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15141 - 15099
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  15141 tttcgaaggattgtttaataaatcagattttgatggattttgt 15099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15784 - 15742
Alignment:
Q  1 tttcgaaggattgtttaataaattggattttgatagattttgt 43  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  15784 tttcgaaggattgtttaataaatcagattttgatggattttgt 15742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 38668 - 38612
Alignment:
Q  36 gattttgtagtgtaattttaacaacaaaaaatctttcatgaaaagatgagatttctt 92  Q
    |||||| ||||| ||||||| ||  ||||| ||||||||||||| ||||||||||||    
T  38668 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 38612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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