View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0929_high_19 (Length: 259)
Name: NF0929_high_19
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0929_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 38341641 - 38341391
Alignment:
| Q |
1 |
ttgcaataagcttgtacccacaaataaaatatactccaagagtgtgtaaaagataacacgttttctggtgctctcgtttgctacagttacaaaagaaatt |
100 |
Q |
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| T |
38341641 |
ttgcaataagcttgtacccacaaataaaatatactccaagagtgtgtaaaagataacacgttttctggtgctctcgtttgctacagttacaaaagaaatt |
38341542 |
T |
|
| Q |
101 |
tatcatatacatactcc-tctatcaagatgcatgagtttgataaatgtacacatgaattccatcactagtaagtgagaacaacttactatttcgatgtct |
199 |
Q |
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|||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38341541 |
tatcatatac-tcctctatctatcaagatgcatgagtttgataaatgtacacatgaattccatcactagtaagtgagaacaacttactatttcgatgtct |
38341443 |
T |
|
| Q |
200 |
agtatcacgtgctttcaagtacttttgttctgtaataatagattcctatgct |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
38341442 |
agtatcacgtgctttcaagtacttttgttctgtaataatagattccaatgct |
38341391 |
T |
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