View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0929_low_11 (Length: 401)
Name: NF0929_low_11
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0929_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 96 - 388
Target Start/End: Complemental strand, 46909327 - 46909035
Alignment:
| Q |
96 |
tcactcctatgagtggtaacaattatgaatcctgaagcagattaatgaaacacacaatccttgccaagaagttgaaattcattagaagatgaccctctct |
195 |
Q |
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| T |
46909327 |
tcactcctatgagtggtaacaattatgaatcctgaagcagattaatgaaacacacaatccttaccaagaagttgaaattcattagaagatgaccctctct |
46909228 |
T |
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| Q |
196 |
taactctttgatgcttggaaaaggtgtaatggaattctcattttgtggatatttggaaccgttgcactgaaaaatcacagagcactgtgcacgctgaaag |
295 |
Q |
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| T |
46909227 |
taactttttgatgcttggaaaaggtgtaatggaattctcattttgtggatatttggaaccgttgcactgaaaaatcgcagagcactgtgcacgctgaaag |
46909128 |
T |
|
| Q |
296 |
tgcctatgatctttggcataatctgaaagattatttttcgaacttgatgtcagctattttacaagaattacattcttttccccaaggtgagaa |
388 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46909127 |
tgcctatgatctttggcataatctgaaagattatttttcgaacttgatgtcagctattttacaagaattacattcttttccccaaggtgagaa |
46909035 |
T |
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