View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0929_low_30 (Length: 304)
Name: NF0929_low_30
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0929_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 12055500 - 12055767
Alignment:
| Q |
30 |
ttcgcctcgagtgttggcaatggagaggcttcaattcaagctccgggatgaacatgaacatgtcaaaaattgcggtgggagagaattttgtatgtgggct |
129 |
Q |
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| T |
12055500 |
ttcgcctcgagtgttggcaatggagaggcttcaattcaagctccgggatgaacatgaacatgtcaaatatcgcggtgggagagaattttgtatgtgggct |
12055599 |
T |
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| Q |
130 |
attagaaaatggaaaagggaatgttgttacttgcaaaggaagtaacaatagagttgttagaaatgaaccaaagaatggtggaaattattctgttattgaa |
229 |
Q |
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| T |
12055600 |
attagaaaatggaaaagggaatgttgttacttgcaaaggaagtaacaatagagttgttggaaatgaaccaaagaatggtggaaattattctgttattgaa |
12055699 |
T |
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| Q |
230 |
gctggttcaaaccatgtttgtgctatctcaaatgatggtggtttggattgttggggtgatattgttgg |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
12055700 |
gctggttcaaaccatgtttgtgctatctcaaatgatggtggtttggattgttggggtgatatggttgg |
12055767 |
T |
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