View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0929_low_35 (Length: 291)
Name: NF0929_low_35
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0929_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 30 - 271
Target Start/End: Original strand, 30951712 - 30951951
Alignment:
| Q |
30 |
actatagtatccctaatctccttgcaggagaatgtggcatatataaactaaaatggaggagttcttcatgaggtctggtttctatttaaggtaataccga |
129 |
Q |
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| T |
30951712 |
actatagtatccctaatctccttgcaggagaatgtggcatatataaactaaaatggaggagttcttcatgaggtctggtttctatttaaggtaataccga |
30951811 |
T |
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| Q |
130 |
aaggattgggttttgttaataaattactgggaaacttgtaagctcttaattagtccgatcaaagatcattatataaaatcatcagttattcctcaatatg |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| |
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| T |
30951812 |
aaggattgggttttgttaataaattactgggaaacttgtaagctcttaattagtccgatcaaagattat--tataaaatcgtcagttattcctcaatatg |
30951909 |
T |
|
| Q |
230 |
tcttatttatatatttctttgtcaaatagtatagtggttcat |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
30951910 |
tcttatttatatatttctttgtcaaatagtatagtggttcat |
30951951 |
T |
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