View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0929_low_4 (Length: 632)

Name: NF0929_low_4
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0929_low_4
NF0929_low_4
[»] chr3 (60 HSPs)
chr3 (30-402)||(20484190-20484566)
chr3 (472-624)||(47431721-47431873)
chr3 (468-624)||(51828560-51828716)
chr3 (470-622)||(38535667-38535818)
chr3 (468-624)||(51827978-51828133)
chr3 (468-624)||(34105018-34105175)
chr3 (496-624)||(40275464-40275591)
chr3 (468-624)||(49720392-49720547)
chr3 (482-626)||(55389640-55389783)
chr3 (472-624)||(40839022-40839173)
chr3 (468-624)||(46013443-46013598)
chr3 (468-624)||(49951916-49952071)
chr3 (472-624)||(51473225-51473377)
chr3 (506-624)||(46013792-46013910)
chr3 (468-622)||(51472876-51473029)
chr3 (471-624)||(330206-330358)
chr3 (496-624)||(25534939-25535067)
chr3 (471-624)||(55389967-55390119)
chr3 (468-624)||(30513743-30513898)
chr3 (471-621)||(40838676-40838825)
chr3 (472-622)||(52237189-52237338)
chr3 (472-624)||(40275118-40275271)
chr3 (487-624)||(52236856-52236992)
chr3 (471-624)||(52375701-52375853)
chr3 (549-624)||(32730759-32730834)
chr3 (496-624)||(41998278-41998406)
chr3 (549-624)||(50662782-50662857)
chr3 (549-624)||(51828327-51828402)
chr3 (468-624)||(14654561-14654714)
chr3 (468-624)||(32730410-32730565)
chr3 (549-624)||(43678396-43678471)
chr3 (468-612)||(44676493-44676636)
chr3 (549-624)||(51828910-51828985)
chr3 (472-624)||(52375352-52375503)
chr3 (549-624)||(2051400-2051475)
chr3 (472-624)||(49951571-49951722)
chr3 (471-609)||(22370620-22370758)
chr3 (550-622)||(2044373-2044445)
chr3 (468-621)||(43678657-43678809)
chr3 (552-624)||(44676842-44676914)
chr3 (549-624)||(34104739-34104813)
chr3 (468-624)||(41998600-41998753)
chr3 (549-616)||(38535410-38535477)
chr3 (471-586)||(16689382-16689496)
chr3 (549-615)||(16701168-16701234)
chr3 (502-618)||(43222765-43222881)
chr3 (567-618)||(14654310-14654361)
chr3 (550-624)||(55192220-55192293)
chr3 (575-624)||(43222517-43222566)
chr3 (549-625)||(49407897-49407972)
chr3 (549-608)||(37847206-37847264)
chr3 (549-624)||(39010176-39010250)
chr3 (472-582)||(329871-329980)
chr3 (549-586)||(49720769-49720806)
chr3 (552-608)||(5137365-5137421)
chr3 (549-624)||(37075790-37075864)
chr3 (571-608)||(29801800-29801837)
chr3 (567-608)||(36701227-36701268)
chr3 (472-540)||(14654224-14654292)
chr3 (549-601)||(27200085-27200136)
[»] chr8 (33 HSPs)
chr8 (468-624)||(28254796-28254951)
chr8 (468-624)||(9796747-9796902)
chr8 (472-624)||(18049615-18049767)
chr8 (468-624)||(18049961-18050116)
chr8 (469-624)||(41260631-41260785)
chr8 (482-624)||(28254460-28254602)
chr8 (468-624)||(35693889-35694046)
chr8 (468-620)||(599553-599704)
chr8 (472-624)||(18428131-18428283)
chr8 (549-624)||(34799181-34799256)
chr8 (488-623)||(6115481-6115616)
chr8 (503-621)||(26252865-26252982)
chr8 (487-624)||(34799453-34799589)
chr8 (471-624)||(35427182-35427334)
chr8 (549-624)||(16578466-16578541)
chr8 (469-624)||(5731182-5731336)
chr8 (549-619)||(15256203-15256273)
chr8 (471-624)||(7910986-7911138)
chr8 (468-624)||(16578129-16578285)
chr8 (472-624)||(9797096-9797248)
chr8 (551-622)||(35694242-35694313)
chr8 (468-582)||(15255874-15255987)
chr8 (471-621)||(42036144-42036294)
chr8 (472-624)||(42035797-42035948)
chr8 (549-625)||(599867-599943)
chr8 (552-624)||(35426917-35426989)
chr8 (565-624)||(35163815-35163874)
chr8 (472-624)||(2208739-2208891)
chr8 (551-610)||(5730920-5730979)
chr8 (569-622)||(7910738-7910791)
chr8 (571-608)||(19176414-19176451)
chr8 (549-586)||(41260372-41260409)
chr8 (592-624)||(41260405-41260437)
[»] chr5 (28 HSPs)
chr5 (468-622)||(28289705-28289858)
chr5 (468-624)||(18150093-18150249)
chr5 (468-624)||(21371066-21371221)
chr5 (469-624)||(32697593-32697750)
chr5 (549-624)||(8418991-8419066)
chr5 (549-624)||(28290014-28290089)
chr5 (496-624)||(19291405-19291533)
chr5 (472-624)||(15029679-15029830)
chr5 (471-624)||(38900668-38900818)
chr5 (471-624)||(4966840-4966991)
chr5 (500-624)||(4967139-4967264)
chr5 (472-624)||(15115465-15115613)
chr5 (549-624)||(22651446-22651521)
chr5 (549-624)||(39083461-39083536)
chr5 (549-624)||(5161684-5161759)
chr5 (549-622)||(14340481-14340554)
chr5 (571-624)||(32697458-32697511)
chr5 (550-616)||(14340785-14340851)
chr5 (552-622)||(21370798-21370870)
chr5 (487-616)||(38901020-38901146)
chr5 (549-608)||(28494945-28495003)
chr5 (579-624)||(22651715-22651760)
chr5 (549-608)||(10721887-10721945)
chr5 (482-582)||(18149768-18149867)
chr5 (549-608)||(27307162-27307220)
chr5 (550-608)||(27307444-27307501)
chr5 (571-608)||(8461315-8461352)
chr5 (571-607)||(164314-164350)
[»] chr4 (44 HSPs)
chr4 (468-624)||(34789752-34789908)
chr4 (468-625)||(46737024-46737180)
chr4 (468-624)||(55677327-55677483)
chr4 (468-611)||(19528890-19529033)
chr4 (468-624)||(14439849-14440004)
chr4 (468-624)||(24851835-24851991)
chr4 (468-624)||(34807137-34807293)
chr4 (468-624)||(12593393-12593548)
chr4 (468-624)||(21034606-21034762)
chr4 (472-624)||(28465106-28465257)
chr4 (468-624)||(54440592-54440745)
chr4 (472-624)||(26974308-26974460)
chr4 (472-624)||(34789407-34789558)
chr4 (468-621)||(33689850-33690001)
chr4 (472-624)||(14440198-14440349)
chr4 (549-624)||(41114260-41114335)
chr4 (468-624)||(45838568-45838723)
chr4 (472-620)||(21034260-21034408)
chr4 (549-624)||(35643668-35643743)
chr4 (549-624)||(45838917-45838992)
chr4 (549-623)||(56077695-56077769)
chr4 (549-622)||(24851566-24851639)
chr4 (487-624)||(54440939-54441075)
chr4 (549-624)||(34807509-34807584)
chr4 (549-624)||(41608476-41608551)
chr4 (468-586)||(6617070-6617187)
chr4 (482-622)||(12593059-12593198)
chr4 (472-624)||(28465451-28465602)
chr4 (554-624)||(6616779-6616849)
chr4 (503-624)||(19529063-19529184)
chr4 (468-622)||(36168350-36168506)
chr4 (549-624)||(229529-229604)
chr4 (551-624)||(36168701-36168774)
chr4 (553-622)||(46736760-46736829)
chr4 (487-624)||(35193348-35193483)
chr4 (549-624)||(28166105-28166180)
chr4 (549-624)||(16214865-16214940)
chr4 (549-624)||(229262-229337)
chr4 (487-576)||(26974662-26974751)
chr4 (549-624)||(17504075-17504149)
chr4 (566-617)||(18965513-18965564)
chr4 (549-614)||(18965241-18965306)
chr4 (549-584)||(35643968-35644003)
chr4 (549-582)||(33778024-33778057)
[»] chr1 (44 HSPs)
chr1 (468-624)||(10278569-10278725)
chr1 (468-624)||(30786792-30786948)
chr1 (472-624)||(44582082-44582233)
chr1 (468-624)||(34555400-34555557)
chr1 (472-624)||(52335880-52336031)
chr1 (469-624)||(443921-444075)
chr1 (500-622)||(8230013-8230134)
chr1 (472-624)||(34555750-34555903)
chr1 (499-624)||(8229689-8229816)
chr1 (468-624)||(16298703-16298858)
chr1 (549-624)||(17641734-17641809)
chr1 (549-624)||(21938664-21938739)
chr1 (469-624)||(37421182-37421338)
chr1 (549-624)||(44954596-44954671)
chr1 (549-621)||(16299055-16299127)
chr1 (468-624)||(1837526-1837681)
chr1 (549-624)||(9992256-9992331)
chr1 (468-624)||(29438951-29439107)
chr1 (468-622)||(4080042-4080195)
chr1 (549-621)||(1744428-1744500)
chr1 (549-624)||(37505438-37505513)
chr1 (487-622)||(2868080-2868214)
chr1 (550-622)||(17641467-17641539)
chr1 (549-624)||(6224800-6224875)
chr1 (482-622)||(10278922-10279058)
chr1 (469-624)||(23340205-23340359)
chr1 (549-624)||(44954327-44954402)
chr1 (511-624)||(44582427-44582541)
chr1 (549-624)||(9833522-9833596)
chr1 (549-624)||(9992525-9992600)
chr1 (549-624)||(50304883-50304958)
chr1 (552-624)||(30787142-30787214)
chr1 (549-624)||(29021234-29021308)
chr1 (472-612)||(37505092-37505232)
chr1 (468-608)||(45048176-45048314)
chr1 (549-624)||(50305152-50305227)
chr1 (549-614)||(2868012-2868077)
chr1 (471-540)||(50304463-50304532)
chr1 (487-608)||(39485105-39485224)
chr1 (549-624)||(50926333-50926408)
chr1 (549-624)||(50926611-50926686)
chr1 (549-624)||(23526759-23526833)
chr1 (571-607)||(4636356-4636392)
chr1 (549-597)||(45048533-45048580)
[»] chr7 (40 HSPs)
chr7 (468-624)||(27245224-27245380)
chr7 (468-624)||(39388636-39388793)
chr7 (468-624)||(28687869-28688024)
chr7 (468-624)||(9181779-9181937)
chr7 (468-624)||(7732509-7732664)
chr7 (468-624)||(25637218-25637374)
chr7 (468-622)||(16081671-16081824)
chr7 (549-624)||(9181633-9181708)
chr7 (468-624)||(14311336-14311492)
chr7 (472-624)||(25637568-25637719)
chr7 (496-624)||(48247961-48248089)
chr7 (496-622)||(14311659-14311784)
chr7 (487-624)||(26026357-26026494)
chr7 (468-624)||(11973772-11973927)
chr7 (468-624)||(35161171-35161327)
chr7 (468-624)||(24929673-24929833)
chr7 (468-624)||(48247608-48247767)
chr7 (468-622)||(26048319-26048471)
chr7 (549-624)||(5745740-5745815)
chr7 (550-624)||(15712467-15712541)
chr7 (549-622)||(786884-786957)
chr7 (559-624)||(26048059-26048124)
chr7 (552-624)||(27245574-27245646)
chr7 (549-624)||(11971439-11971514)
chr7 (549-624)||(16081400-16081475)
chr7 (549-624)||(26026688-26026763)
chr7 (552-624)||(5746009-5746081)
chr7 (552-624)||(7732857-7732929)
chr7 (482-625)||(2758067-2758209)
chr7 (472-624)||(34595142-34595293)
chr7 (552-623)||(35160906-35160976)
chr7 (473-624)||(787152-787306)
chr7 (468-586)||(5333901-5334018)
chr7 (549-601)||(28687694-28687746)
chr7 (549-610)||(33880969-33881029)
chr7 (552-600)||(5184498-5184546)
chr7 (472-539)||(5334273-5334340)
chr7 (549-624)||(34594684-34594758)
chr7 (549-608)||(9394117-9394175)
chr7 (567-608)||(35579017-35579058)
[»] chr6 (16 HSPs)
chr6 (468-624)||(31073512-31073667)
chr6 (468-624)||(31574095-31574250)
chr6 (468-615)||(5120848-5120994)
chr6 (472-624)||(25472382-25472534)
chr6 (549-624)||(28636566-28636641)
chr6 (549-624)||(31573826-31573901)
chr6 (482-624)||(5114503-5114644)
chr6 (472-624)||(25468874-25469027)
chr6 (549-621)||(29891453-29891525)
chr6 (472-624)||(29891105-29891256)
chr6 (550-621)||(30251064-30251135)
chr6 (482-624)||(24640555-24640696)
chr6 (553-624)||(30250796-30250867)
chr6 (473-592)||(28636318-28636435)
chr6 (549-588)||(31073251-31073290)
chr6 (571-608)||(20741485-20741522)
[»] chr2 (47 HSPs)
chr2 (472-624)||(16175719-16175871)
chr2 (468-624)||(38007971-38008127)
chr2 (468-624)||(43216079-43216234)
chr2 (471-624)||(42192612-42192765)
chr2 (468-624)||(4808900-4809055)
chr2 (468-624)||(20128107-20128262)
chr2 (468-622)||(4355776-4355929)
chr2 (471-624)||(11540008-11540160)
chr2 (468-624)||(32418180-32418333)
chr2 (468-616)||(15550694-15550842)
chr2 (468-624)||(33920633-33920788)
chr2 (472-624)||(33920981-33921133)
chr2 (472-624)||(42192265-42192416)
chr2 (468-624)||(649548-649702)
chr2 (549-624)||(5560920-5560995)
chr2 (472-624)||(11539662-11539814)
chr2 (468-624)||(16953304-16953459)
chr2 (487-621)||(20127776-20127910)
chr2 (468-622)||(43160030-43160184)
chr2 (472-621)||(6949476-6949625)
chr2 (487-616)||(13399462-13399590)
chr2 (472-624)||(62982-63133)
chr2 (468-624)||(9330164-9330320)
chr2 (472-622)||(43160382-43160532)
chr2 (472-624)||(38008321-38008472)
chr2 (549-624)||(44219745-44219820)
chr2 (549-624)||(13315597-13315673)
chr2 (549-624)||(63328-63403)
chr2 (549-624)||(4356126-4356201)
chr2 (551-624)||(16953040-16953113)
chr2 (551-624)||(17061011-17061084)
chr2 (549-624)||(4809249-4809324)
chr2 (549-624)||(13399790-13399865)
chr2 (549-624)||(15551044-15551119)
chr2 (471-624)||(44220013-44220167)
chr2 (549-622)||(43215810-43215883)
chr2 (549-609)||(24140064-24140124)
chr2 (549-624)||(22445741-22445816)
chr2 (552-624)||(9329985-9330056)
chr2 (468-586)||(6949850-6949969)
chr2 (213-269)||(13569033-13569089)
chr2 (549-624)||(28143400-28143474)
chr2 (468-624)||(25335977-25336125)
chr2 (499-590)||(32418550-32418640)
chr2 (552-608)||(11090904-11090960)
chr2 (552-608)||(18450935-18450991)
chr2 (571-622)||(24139954-24140006)
[»] scaffold0097 (2 HSPs)
scaffold0097 (471-624)||(46290-46443)
scaffold0097 (472-624)||(46637-46789)
[»] scaffold0025 (1 HSPs)
scaffold0025 (549-624)||(78418-78493)
[»] scaffold0712 (2 HSPs)
scaffold0712 (468-624)||(6761-6921)
scaffold0712 (549-624)||(6493-6568)
[»] scaffold0709 (2 HSPs)
scaffold0709 (468-624)||(6779-6939)
scaffold0709 (549-624)||(6511-6586)


Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 30 - 402
Target Start/End: Original strand, 20484190 - 20484566
Alignment:
Q  30 tcacagaccaaatggtatattaatcagtggataaaataaaaataannnnnnnnnnn-gacatgaaattctgagaaagcggtgagagaagaaagtgaaatg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||    
T  20484190 tcacagaccaaatggtatattaatcagtggataaaataaaaataaaaatatttttttgacatgaaattctgagaaagcggtgagagaagaaagtgaaatg 20484289  T
Q  129 atgggaacttacgggtatcagtggaaagactcatgcaaaggaagggcatagcgcgattagaa---gaggaacgcaacatggcagtgccggcaacggagac 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||    
T  20484290 atgggaacttacgggtatcagtggaaagactcatgcaaaggaagggcatagcgcgcttagaagaagaggaacgcaacatggcagtgccggcaacggagac 20484389  T
Q  226 tccgccgattccggcggcccatgaagcgcgacggtggagaacggcggcgttgattggtggaatgtggaaggtccttgctgcacaccatgacgccatctct 325  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20484390 tccgccgattccggcggcccatgaagcacgacggtggagaacggcggcgttgattggtggaatgtggaaggtccttgctgcacaccatgacgccatctct 20484489  T
Q  326 ttctcactagattcgctcagacacgagggagttcacggtctgtacgaactacgaagactgtaacacacgcactgaaa 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  20484490 ttctcactagattcgctcagacacgagggagttcacggtctgtactaactacgaagactgtaacacacgcagtgaaa 20484566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 47431721 - 47431873
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||| |||||||||| ||||||| |||||||||| |||||||||||        |||||||||||||||||||||||    
T  47431721 cattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttttgcagttttagtcctatctccctat 47431820  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47431821 ttctaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 51828560 - 51828716
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || || |||||||||| ||| |||||||||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||    
T  51828560 cttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttttgcagttttagtcctatctcc 51828659  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  51828660 ctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 470 - 622
Target Start/End: Complemental strand, 38535818 - 38535667
Alignment:
Q  470 tgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccct 569  Q
    |||||||| || ||||||||||||| |||| | ||||||| ||||||||||||||||| ||||||||||||       | ||||||||||||||||||||    
T  38535818 tgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgttttttgc-agttttagtcctatctccct 38535720  T
Q  570 atttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||    
T  38535719 atttccaactccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 51827978 - 51828133
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||       | | ||||||||||||||||    
T  51827978 cttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-atttttagtcctatctcc 51828076  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  51828077 ctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 34105175 - 34105018
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctc 566  Q
    |||||||||| || |||||||||| || ||||| |||||||| ||||||| ||||||||| ||||||||||||         |||||||||||| |||||    
T  34105175 cttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcccatctc 34105076  T
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    | ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  34105075 cttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 496 - 624
Target Start/End: Complemental strand, 40275591 - 40275464
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaa 595  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||       | |||||||||| |||| ||||||||||||||||||||||||||| ||    
T  40275591 gtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttgc-agttttagtcatatccccctatttccaactccagaaacgcacaaaa 40275493  T
Q  596 atgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||||||    
T  40275492 atgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 49720392 - 49720547
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||| |||| |       | ||||||||||||||||||    
T  49720392 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgttttttgc-agttttagtcctatctcc 49720490  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49720491 ttatttctaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 482 - 626
Target Start/End: Original strand, 55389640 - 55389783
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | ||||||||| |||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||||||||||||    
T  55389640 aactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctatttccaactcc 55389738  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatgctac 626  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  55389739 agaaacgcacagaaatgacagttttagttcaaccacctatgctac 55389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 40839173 - 40839022
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||| |||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||||||    
T  40839173 cattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctccctat 40839075  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| |||||||||||||||||||||||||| |||||||||||| || ||||||    
T  40839074 ttctaactccagaaacgcacagaaatgacagttttagtccaactacatatgct 40839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 46013443 - 46013598
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||| ||||||       | |||||||||| |||||||    
T  46013443 cttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttttttgc-agttttagtcatatctcc 46013541  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  46013542 ctattttcaactccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 49952071 - 49951916
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| |||||||||  ||||||| |||       | |||||||||| |||||||    
T  49952071 cttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgttttttgc-agttttagtcatatctcc 49951973  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49951972 ctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 51473377 - 51473225
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  51473377 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 51473278  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  51473277 ttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 506 - 624
Target Start/End: Complemental strand, 46013910 - 46013792
Alignment:
Q  506 ttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattt 605  Q
    |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  46013910 ttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttt 46013811  T
Q  606 tagtccaaccacctatgct 624  Q
    |||||||||||||||||||    
T  46013810 tagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 51472876 - 51473029
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| | ||||||  ||||||||||||| |||| || ||||| ||| ||||| ||||||       | ||||||||||||||||||    
T  51472876 cttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgttttttgc-agttttagtcctatctcc 51472974  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  51472975 ctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 330358 - 330206
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | ||||||||| |||| |||| || ||||||||| ||||||||||||       | |||||||||| ||||||||||    
T  330358 gcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgttttttgc-agttttagtcatatctcccta 330260  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  330259 tttccaactctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 496 - 624
Target Start/End: Original strand, 25534939 - 25535067
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctc-taaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacaga 594  Q
    |||||||||||||| ||||||| ||||||||| | |||| ||||||       | ||||||||||||||||||||||||||||||||||||||||||| |    
T  25534939 gtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgttttttgc-agttttagtcctatctccctatttccaactccagaaacgcacaaa 25535037  T
Q  595 aatgacaattttagtccaaccacctatgct 624  Q
    ||||||| ||||||||||||||||||||||    
T  25535038 aatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 55390119 - 55389967
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    |||||||||| || | |||||| | ||||||||| |||| |||| || ||||||||| ||||||||||||         ||||||||||||| |||||||    
T  55390119 gcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgttttttgt-agttttagtcctacctcccta 55390021  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  55390020 tttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 30513743 - 30513898
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||| | |||||| || |||| |||||||||||||||||| |||||||||||        ||||||||||| |||||||    
T  30513743 cttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtct-taaactatatgtttttctgcagttttagtcatatctcc 30513841  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     |||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  30513842 atatttcgaacttcagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 471 - 621
Target Start/End: Original strand, 40838676 - 40838825
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | ||| |||||||||| |||| || |||||||||  |||||||||||       | |||||||||| |||| |||||    
T  40838676 gcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgttttttgc-agttttagtcatatcccccta 40838774  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40838775 tttccaactccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 472 - 622
Target Start/End: Complemental strand, 52237338 - 52237189
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||||||||||| ||||||| ||||||||| ||||| ||||||       | ||||||||||||||||||||||    
T  52237338 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgc-agttttagtcctatctccctat 52237240  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||| |||||| ||||||||||||||||||| |||||||| |||||| ||||    
T  52237239 ttctaactccggaaacgcacagaaatgacagttttagtcaaaccacatatg 52237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 40275118 - 40275271
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctcccta 570  Q
    |||||| || |||| |||||| | |||||||||||||| ||||||| ||||| ||| ||||||| ||||         ||||||||||||||||||| ||    
T  40275118 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttgcagttttagtcctatctccata 40275217  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  40275218 tttctaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 487 - 624
Target Start/End: Original strand, 52236856 - 52236992
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | ||| |||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||| |||| |||||||| ||||||||||||    
T  52236856 acgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcatatccccctattttcaactccagaaa 52236954  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  52236955 cgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 52375853 - 52375701
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | |||||||||||||| ||| ||| |||||||||  |||||||||||       | |||||||||| |||  |||||    
T  52375853 gcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgc-agttttagtcatattccccta 52375755  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  52375754 tttccaactccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 32730834 - 32730759
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32730834 cagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 496 - 624
Target Start/End: Original strand, 41998278 - 41998406
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaa 595  Q
    |||||| || |||| ||||||| |||||||||  |||||||||||        ||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  41998278 gtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcatatctccctatttccaactccataaacgaacagaa 41998377  T
Q  596 atgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||||||    
T  41998378 atgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 50662857 - 50662782
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50662857 cagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 51828402 - 51828327
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  51828402 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 14654714 - 14654561
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |  ||||||||||| ||||||| |||||||||  |||||||| |         |||||||||||||||||||    
T  14654714 cttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgttttttg---cagttttagtcctatctcc 14654618  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     |||||||||||||||||||||||| |||||||| ||||||| |||||| |||||||    
T  14654617 ttatttccaactccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 32730410 - 32730565
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || ||||   |||||| |||||||||||||| ||| ||| ||||||||| ||||||||||||       | ||||||| || |||||||    
T  32730410 cttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgc-agttttaatcgtatctcc 32730508  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||| ||||||||||| |||||||| ||||||| ||| ||||||||||    
T  32730509 ctatttccaactctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 43678396 - 43678471
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  43678396 cagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 468 - 612
Target Start/End: Original strand, 44676493 - 44676636
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| | ||||||  || |||||||||| ||||||| |||| |||| ||||||||||||       | || |||||||||||||||    
T  44676493 cttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgttttttgc-agctttagtcctatctcc 44676591  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtcca 612  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  44676592 ctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 51828985 - 51828910
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||||    
T  51828985 cagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 52375352 - 52375503
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    ||||||||| || | |||||| | ||| |||||||||| ||| ||| ||||||||| ||||||||||||       | ||||||||| ||||||||||||    
T  52375352 cattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgc-agttttagttctatctccctat 52375450  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||||||||||| |||||||||| |||||||| |||||| ||||||    
T  52375451 ttctaactccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 2051400 - 2051475
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| |||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2051400 cagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 2051475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 49951571 - 49951722
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | | ||||||||||||||||||||    
T  49951571 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaa-ttttagtcctatctccctat 49951669  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| |||| ||| ||||||||||||||| ||||||    
T  49951670 ttccaactccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 609
Target Start/End: Original strand, 22370620 - 22370758
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | ||||||||| |||| || | || ||||||||| ||||||||||||        ||||||||||||||||||| ||    
T  22370620 gcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatctcctta 22370719  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagt 609  Q
    | ||||||||||||||||||||||||| ||| |||||||    
T  22370720 tctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 550 - 622
Target Start/End: Original strand, 2044373 - 2044445
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||    
T  2044373 agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 621
Target Start/End: Complemental strand, 43678809 - 43678657
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| |  |||| ||||| || |||| ||||||||| ||||||| |||||||||  |||||||||||       | ||||| |||| ||||| |    
T  43678809 cttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgc-agtttcagtcatatcttc 43678711  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||    
T  43678710 ctatttccaactctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 44676914 - 44676842
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  44676914 ttttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 34104739 - 34104813
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34104739 cagttttagtcatatctcc-tatttccagctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 41998753 - 41998600
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || ||||||||||||| |||||||||||||| ||||||| ||||||||| || |||||||||        |||||||||||||| ||||    
T  41998753 cttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttttttgcagttttagtccta-ctcc 41998656  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||| ||||||| |||  ||||| |  |||||| ||||||||||||||    
T  41998655 ctattttcaactctagaaacgtaca-taatgatagatttagttcaaccacctatgct 41998600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 616
Target Start/End: Original strand, 38535410 - 38535477
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaacca 616  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||    
T  38535410 cagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 471 - 586
Target Start/End: Original strand, 16689382 - 16689496
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||||| |||||||||||||| ||||||| |||||||||  |||| ||||||        |||||||||||||||| |||||    
T  16689382 gcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttttg-cagttttagtcctatcacccta 16689480  T
Q  571 tttccaactccagaaa 586  Q
    ||||| ||||||||||    
T  16689481 tttccgactccagaaa 16689496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 615
Target Start/End: Complemental strand, 16701234 - 16701168
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaacc 615  Q
    ||||||||||| |||||||||||||||||||||| |||||||  ||||| ||| |||||||||||||    
T  16701234 cagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 502 - 618
Target Start/End: Complemental strand, 43222881 - 43222765
Alignment:
Q  502 cctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttc-caactccagaaacgcacagaaatgac 600  Q
    |||||||| ||||||| ||||||||| ||||||| ||||        |||||||||||| | | ||||||||  |||||||||||||||||| |||||||    
T  43222881 cctcttttaaatcgaacaaaatcgtccctaaactttatgtttttttgcagttttagtcccacc-ccctatttttcaactccagaaacgcacaaaaatgac 43222783  T
Q  601 aattttagtccaaccacc 618  Q
    | ||||||||||||||||    
T  43222782 agttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 567 - 618
Target Start/End: Original strand, 14654310 - 14654361
Alignment:
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacc 618  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  14654310 cctatttccaactccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 624
Target Start/End: Original strand, 55192220 - 55192293
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||| |||| ||||| |||||||||||||||| |||||||||| |||||| || ||| ||||||||    
T  55192220 agttttagtcctacctcc-tattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 624
Target Start/End: Original strand, 43222517 - 43222566
Alignment:
Q  575 caactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  43222517 caactccagaaacgtacaaaaatgacagttttagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 549 - 625
Target Start/End: Original strand, 49407897 - 49407972
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgcta 625  Q
    ||||||||||| || |||| ||||| |||||||| ||||||| ||||||||||||||||| || ||| |||||||||    
T  49407897 cagttttagtcatacctcc-tattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 37847264 - 37847206
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||||||||||| ||||| ||||| |||||| ||| |||||||||||||||||    
T  37847264 cagttttagtcctatctcc-tattttcaacttcagaaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 39010176 - 39010250
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||  |||||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||| ||||||    
T  39010176 cagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 582
Target Start/End: Original strand, 329871 - 329980
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | |||||||||||||||||||| |    
T  329871 cattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctgt 329969  T
Q  572 ttccaactcca 582  Q
    |||||||||||    
T  329970 ttccaactcca 329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 586
Target Start/End: Complemental strand, 49720806 - 49720769
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaa 586  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  49720806 cagttttagtcttatctccctatttccaactccagaaa 49720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 5137421 - 5137365
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||||||||   |||| ||||||||||||||| |||||||||| ||||||    
T  5137421 ttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 37075790 - 37075864
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| |||  ||||| |||||||||||||||| |||||||||  |||||| || ||| ||||||||    
T  37075790 cagttttagtcctacctct-tattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 29801837 - 29801800
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  29801837 tttcaaactccagaaacgcagagaaatgacaattttag 29801800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 608
Target Start/End: Original strand, 36701227 - 36701268
Alignment:
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  36701227 cctattttcaactccagaaacgcagataaatgacaattttag 36701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 14654224 - 14654292
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatg 540  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||| |||||||||||    
T  14654224 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 27200136 - 27200085
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgaca 601  Q
    ||||||||||| || |||| ||||| |||||||||||||||| ||||||||||    
T  27200136 cagttttagtcatacctcc-tattttcaactccagaaacgcagagaaatgaca 27200085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 28254951 - 28254796
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||||||        | ||||||||||||||||||    
T  28254951 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttgc-agttttagtcctatctcc 28254853  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28254852 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 9796747 - 9796902
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| || ||||| |||||||||||||| ||||||| |||||| ||  |||||||||||       | |||||||||| |||||||    
T  9796747 cttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgttttttgc-agttttagtcatatctcc 9796845  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  9796846 ctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 18049615 - 18049767
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | || ||| || |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  18049615 cattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 18049714  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18049715 ttccaactccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 18050116 - 18049961
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||       |  |||||| ||||||||||    
T  18050116 cttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgct-gttttaatcctatctcc 18050018  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  18050017 ctattttcaactccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 469 - 624
Target Start/End: Complemental strand, 41260785 - 41260631
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccc 568  Q
    ||||||||| |  |||| ||||||||  || |||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||||||||||||    
T  41260785 ttgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctccc 41260687  T
Q  569 tatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  41260686 tattttcaactccagaaacgcacataaatgacagttttagtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 482 - 624
Target Start/End: Original strand, 28254460 - 28254602
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | |||||| || |||| ||| ||| |||||||||  |||||||||||        |||||||||||||||||||||||||||||||||    
T  28254460 aactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaactcc 28254559  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  28254560 agaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 35693889 - 35694046
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctc 566  Q
    |||||||||| || || |||||||| |  | ||||||||||| |||||||||||||||||  ||||||||||          ||||||||||||||||||    
T  35693889 cttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatatttttttcagttttagtcctatctc 35693988  T
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  35693989 cctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 620
Target Start/End: Original strand, 599553 - 599704
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| |||||| || ||||| ||||||       | |||||||||| |||||||    
T  599553 cttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgttttttgc-agttttagtcatatctcc 599651  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccaccta 620  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  599652 ctatttccaactccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 18428283 - 18428131
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||        |||||||| ||||||||||||||    
T  18428283 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttactcctatctccctat 18428184  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  18428183 ttccaactccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 34799181 - 34799256
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  34799181 cagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 488 - 623
Target Start/End: Complemental strand, 6115616 - 6115481
Alignment:
Q  488 cgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaac 587  Q
    ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||         ||||||||| |||||||| ||||| |||||| ||||||    
T  6115616 cgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgtagttttagttctatctccttattttcaactcaagaaac 6115517  T
Q  588 gcacagaaatgacaattttagtccaaccacctatgc 623  Q
    |||||||||||||| ||||||||||||||| |||||    
T  6115516 gcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 503 - 621
Target Start/End: Original strand, 26252865 - 26252982
Alignment:
Q  503 ctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaa 602  Q
    ||||||| ||||||| ||||||||| ||||||||||||       | |||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  26252865 ctcttttaaatcgaacaaaatcgtccctaaactatatgttttgtgc-agttttagtcctatctccctatttccaactccagaaacgctcagaaatgacag 26252963  T
Q  603 ttttagtccaaccacctat 621  Q
     ||||||||||||||||||    
T  26252964 atttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 487 - 624
Target Start/End: Complemental strand, 34799589 - 34799453
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||||| |||||||||||||| ||||||| ||||| ||| ||||||||||||       | |||||||||||||||| |||||||||||||||| |||    
T  34799589 acgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttttttgc-agttttagtcctatcttcctatttccaactccataaa 34799491  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||| | ||||||| ||||||||||||||    
T  34799490 cgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 35427334 - 35427182
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | || ||||||||||| || |||| ||||||||| ||||| |||||        | ||||||||||| |||||||||    
T  35427334 gcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatattttttgc-agttttagtcccatctcccta 35427236  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  35427235 tttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 16578541 - 16578466
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  16578541 cagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 469 - 624
Target Start/End: Complemental strand, 5731336 - 5731182
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccc 568  Q
    ||||||||| || |||| | |||||| || |||||| || | ||||||| |||||||||  |||||||||||       | ||||||||| |||||||||    
T  5731336 ttgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgc-agttttagttctatctccc 5731238  T
Q  569 tatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5731237 tattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 619
Target Start/End: Complemental strand, 15256273 - 15256203
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 619  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15256273 cagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 7911138 - 7910986
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | || ||||||||||| ||||||| ||||||||| |||||||||||        | |||||||||| |||| | |||    
T  7911138 gcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgc-agttttagtcatatccctcta 7911040  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  7911039 ttttcaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 16578129 - 16578285
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||| ||||||        ||||||| |||||||||||    
T  16578129 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttg-cagttttggtcctatctcc 16578227  T
Q  568 ctatttccaactccagaaacgc-acagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||| | | |||  ||| |||||||||||||| |||||||    
T  16578228 ctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgct 16578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 9797248 - 9797096
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | || ||| || |||| |||| ||||||||||||  |||||||||||        |||||||||| |||||| |||||    
T  9797248 cattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgcagttttagttctatctacctat 9797149  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  9797148 ttccaactccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 35694313 - 35694242
Alignment:
Q  551 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  35694313 gttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 582
Target Start/End: Original strand, 15255874 - 15255987
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||        |||||||||||||||||||    
T  15255874 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg-cagttttagtcctatctcc 15255972  T
Q  568 ctatttccaactcca 582  Q
    |||||||||||||||    
T  15255973 ctatttccaactcca 15255987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 621
Target Start/End: Complemental strand, 42036294 - 42036144
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || ||||||||||| |  || |||||||||| ||||||| ||||||||| ||||||||||||        ||||||||||| |||   | ||    
T  42036294 gcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcgtattctcata 42036195  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  42036194 tttccaactccagaaatgcacaaaaatgacagttttagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 42035797 - 42035948
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | || ||||||||||| ||||||| |||||||||  ||||||||||        | | ||||||||||||||||||||    
T  42035797 cattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttgcaa-ttttagtcctatctccctat 42035895  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  42035896 ttctaactccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 549 - 625
Target Start/End: Complemental strand, 599943 - 599867
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgcta 625  Q
    ||||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||||||||||||||| |||||||    
T  599943 cagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaaccacttatgcta 599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 35426917 - 35426989
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 565 - 624
Target Start/End: Original strand, 35163815 - 35163874
Alignment:
Q  565 tccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 2208739 - 2208891
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  ||||||||||         || |||||||| |||||||||||    
T  2208739 cattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttacaattttagtcatatctccctat 2208838  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    || ||| |||||||||| |||||||| | | ||||||||||||||||||||||    
T  2208839 tttcaattccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 610
Target Start/End: Original strand, 5730920 - 5730979
Alignment:
Q  551 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtc 610  Q
    |||||||||||| ||||||||||  ||||||||||||| |||||||||||| ||||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 622
Target Start/End: Original strand, 7910738 - 7910791
Alignment:
Q  569 tatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||| ||||| ||||| |||||||||||||| |||||||| |||||| ||||    
T  7910738 tatttctaactcaagaaatgcacagaaatgacagttttagtcaaaccacatatg 7910791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 19176414 - 19176451
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  19176414 tttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 586
Target Start/End: Original strand, 41260372 - 41260409
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaa 586  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  41260372 cagttttagtcttatctccctatttccaactctagaaa 41260409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 624
Target Start/End: Original strand, 41260405 - 41260437
Alignment:
Q  592 agaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| ||||||||||||||||||||||    
T  41260405 agaaatgacacttttagtccaaccacctatgct 41260437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 28289705 - 28289858
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||| ||||||       ||||||||||||||||||||    
T  28289705 cttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt-ccagttttagtcctatctcc 28289803  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28289804 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 18150249 - 18150093
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||| ||||| || |||| |||||||| |||||||||||||| ||||||| |||||| || ||||||||||||        |||||||||||||||||||    
T  18150249 cttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttttgcagttttagtcctatctcc 18150150  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  18150149 ctatttccaactccagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 21371221 - 21371066
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |  ||||| |||||||||||||| |||| || ||||||||| ||||||||||||       | | ||||||||||||||||    
T  21371221 cttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgttttttgcaa-ttttagtcctatctcc 21371123  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  21371122 ctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 469 - 624
Target Start/End: Complemental strand, 32697750 - 32697593
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc--cagttttagtcctatctc 566  Q
    ||||||||| || |||| |||||||| |||||||||||||| ||||||| | ||||||| ||||||||||||          ||||||||||  || |||    
T  32697750 ttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttattttgcagttttagtgatacctc 32697651  T
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  32697650 cctatttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 8419066 - 8418991
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  8419066 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaaacacctatgct 8418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 28290089 - 28290014
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  28290089 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 496 - 624
Target Start/End: Original strand, 19291405 - 19291533
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaa 595  Q
    |||||| || |||| ||||||| |||||||||  |||||||||||        ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  19291405 gtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcttatctccttatttccaactccataaacgcacagaa 19291504  T
Q  596 atgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||||||    
T  19291505 atgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 15029830 - 15029679
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||| ||||| |||| ||||||| |||||||||  |||||||||||       | ||||||||| | ||||||||||    
T  15029830 cattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagttcgatctccctat 15029732  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15029731 ttcaaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 624
Target Start/End: Original strand, 38900668 - 38900818
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| |  ||||||||||||| ||||||| ||||||||| ||||| ||||||       | |||||||||||||||||||||    
T  38900668 gcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgc-agttttagtcctatctcccta 38900766  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||| ||||| ||| ||||||||   ||||||||||||||||||||    
T  38900767 tttccaactccataaacgtacataaatgaca--gttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 471 - 624
Target Start/End: Original strand, 4966840 - 4966991
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | || || |||||||| ||||||| ||||||||| ||||||||||||       | |||||||||| |||| |||||    
T  4966840 gcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagc-agttttagtcatatc-cccta 4966937  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| ||||| |||||||||||||| |||| | |||||||||||||||    
T  4966938 tttccaactctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 500 - 624
Target Start/End: Complemental strand, 4967264 - 4967139
Alignment:
Q  500 tacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctccctatttccaactccagaaacgcacagaaatg 598  Q
    |||||||||| ||||||| ||||||||| ||||||||||||         ||||||||||||||| |||||||||| ||||| ||||||||||| |||||    
T  4967264 tacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatg 4967165  T
Q  599 acaattttagtccaaccacctatgct 624  Q
    | | ||||||||||||||| ||||||    
T  4967164 atagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 15115613 - 15115465
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||||||||||| ||||||| |||||||||  ||||||||||         ||||||||||| |||| ||||||    
T  15115613 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatttttg----cagttttagtcatatcgccctat 15115518  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| | ||||||||| |||||||| ||||||| ||||||| ||||||    
T  15115517 ttccaactcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 22651446 - 22651521
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| |||| ||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  22651446 cagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 39083461 - 39083536
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||    
T  39083461 cagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaatcacatatgct 39083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 5161684 - 5161759
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||| ||||||||||||| || ||||||| |||||||||| ||||||| ||||||||||||||    
T  5161684 cagttttagtcttatcttcctatttccaacttcaaaaacgcatagaaatgacagttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 14340481 - 14340554
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||| ||||||||| ||||||||||||| ||||||  |||||||||||| ||||||||||||||| ||||    
T  14340481 cagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatg 14340554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 32697458 - 32697511
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 616
Target Start/End: Complemental strand, 14340851 - 14340785
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaacca 616  Q
    |||||||||||||||||| |||||||||||||| ||||| | |||||||||| |||||||| |||||    
T  14340851 agttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 552 - 622
Target Start/End: Original strand, 21370798 - 21370870
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgc--acagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||||||||||||||||||||||||||  | | ||||| || ||||||||| ||||||||||    
T  21370798 ttttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatg 21370870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 616
Target Start/End: Complemental strand, 38901146 - 38901020
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | ||||||||  |||| ||||||| |||||||||  |||||||||||       | |||||||||  ||||||| ||||||||||  ||||||    
T  38901146 acgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagttatatctccttatttccaac--cagaaa 38901050  T
Q  587 cgcacagaaatgacaattttagtccaacca 616  Q
    |||||| |||||||| ||||||||||||||    
T  38901049 cgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 608
Target Start/End: Original strand, 28494945 - 28495003
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||||||||||||| |||| ||||| |||||||||||||||| |||| ||||||||||||    
T  28494945 cagttttagtcctacctcc-tattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 22651760 - 22651715
Alignment:
Q  579 tccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 608
Target Start/End: Original strand, 10721887 - 10721945
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||||||||||||| |||| ||||| |||||||||||||| | |||||||||| ||||||    
T  10721887 cagttttagtcctacctcc-tattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 582
Target Start/End: Original strand, 18149768 - 18149867
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | |||||||||||||| |||||||||||||||||    
T  18149768 aactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatttccctatttccaactcc 18149866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 608
Target Start/End: Original strand, 27307162 - 27307220
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||| || |||| ||||| |||||||||||||||| |||||||||| ||||||    
T  27307162 cagttttagtcttacctcc-tattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 608
Target Start/End: Complemental strand, 27307501 - 27307444
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||||| |||| ||||| |||||||||||| ||| |||||||||| ||||||    
T  27307501 agttttagtcctacctcc-tattttcaactccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 8461352 - 8461315
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  8461352 tttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 607
Target Start/End: Original strand, 164314 - 164350
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaatttta 607  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  164314 tttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 34789908 - 34789752
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||| ||| ||||||||||||        |||||||||||||||||||    
T  34789908 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgcagttttagtcctatctcc 34789809  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  34789808 ctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 468 - 625
Target Start/End: Complemental strand, 46737180 - 46737024
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||| ||||| |    
T  46737180 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcatatcttc 46737082  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgcta 625  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46737081 ctatctccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgcta 46737024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 55677483 - 55677327
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||| ||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||        || ||||||||||||||||    
T  55677483 cttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttacaattttagtcctatctcc 55677384  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||    
T  55677383 ctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 611
Target Start/End: Original strand, 19528890 - 19529033
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || || | |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||        |||||||||||||||||||    
T  19528890 cttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttttgcagttttagtcctatctcc 19528989  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtcc 611  Q
    |||||||||||||| ||||||||||||||||||| |||||||||    
T  19528990 ctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 14439849 - 14440004
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| ||||| |||| |||  || ||||||||| ||||||||||||       | ||||||||||||||||||    
T  14439849 cttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctcc 14439947  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14439948 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 24851991 - 24851835
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  ||||||||||||| ||||||| ||||||||| ||||||||||||        |||||||||||||||||      
T  24851991 cttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatcttt 24851892  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  24851891 ctatttccaactccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 34807137 - 34807293
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| |  |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||| ||||||        |||||||||||||||||||    
T  34807137 cttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttttgcagttttagtcctatctcc 34807236  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34807237 atatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 12593548 - 12593393
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||        | ||||||||||||||||||    
T  12593548 cttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatattttttgc-agttttagtcctatctcc 12593450  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  12593449 ctattttcaactccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 21034762 - 21034606
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||| ||||||| ||||||| ||||||||| || ||||||||         |||||||||| ||||||||    
T  21034762 cttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttttgcagttttagttctatctcc 21034663  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  21034662 ctatttccaactccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 28465106 - 28465257
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||||||||||||  ||||||||||||| ||||||| |||||||||  |||||||||||       | |||||||||| |||||||||||    
T  28465106 cattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcatatctccctat 28465204  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    || |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  28465205 tttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 54440592 - 54440745
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||||||| |         |||||||||||||||||||    
T  54440592 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgttttttg---cagttttagtcctatctcc 54440688  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  54440689 ctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 26974308 - 26974460
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    ||||||||| |||| |||||| | ||| || || |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  26974308 cattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttacagttttagtcctatctccctat 26974407  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  26974408 ttccaactccagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 34789407 - 34789558
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||    
T  34789407 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctat 34789505  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34789506 ttcaaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 468 - 621
Target Start/End: Original strand, 33689850 - 33690001
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| || ||||| |||||||||||||| ||||||| |||||||||  |||||||||||        ||||||||||| |||||||    
T  33689850 cttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttg--cagttttagtcatatctcc 33689947  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    |||||| |||||||||||||||||| |||||||| | |||||||||||||||||    
T  33689948 ctatttacaactccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 14440349 - 14440198
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || ||||||||||| | |||||| || |||| ||||||| |||||| ||  |||||||||||       | |||||||||| |||||||||||    
T  14440349 cattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgttttttgc-agttttagtcatatctccctat 14440251  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  14440250 ttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 41114260 - 41114335
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41114260 cagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 45838568 - 45838723
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||| ||||| || |||| ||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||    
T  45838568 cttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctcc 45838666  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| ||| || |||||||||||||||| | |||| |||||||||||||||||    
T  45838667 ctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 472 - 620
Target Start/End: Original strand, 21034260 - 21034408
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||        ||||||||||| |||||||||||    
T  21034260 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttacagttttagtcatatctccctat 21034359  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccaccta 620  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  21034360 ttccaactccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 35643668 - 35643743
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  35643668 cagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 45838992 - 45838917
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  45838992 cagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 623
Target Start/End: Complemental strand, 56077769 - 56077695
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgc 623  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  56077769 cagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 24851566 - 24851639
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  24851566 cagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 487 - 624
Target Start/End: Complemental strand, 54441075 - 54440939
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | |||||||||||||||||||||||||||||||||||||    
T  54441075 acgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctatttccaactccagaaa 54440977  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||   ||||||| ||||||||||||||||||||||    
T  54440976 cgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 34807584 - 34807509
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||    
T  34807584 cagttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 41608476 - 41608551
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  41608476 cagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 586
Target Start/End: Complemental strand, 6617187 - 6617070
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||         |||||||||||||||||||    
T  6617187 cttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat-tttttttgcagttttagtcctatctcc 6617089  T
Q  568 ctatttccaactccagaaa 586  Q
    |||| ||||||||||||||    
T  6617088 ctatctccaactccagaaa 6617070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 482 - 622
Target Start/End: Original strand, 12593059 - 12593198
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | ||| ||||| |||| ||||||| |||||||||  |||||||||||       | | ||||| |||||||||||||||| |||||||    
T  12593059 aactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaa-ttttaatcctatctccctattttcaactcc 12593157  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  12593158 agaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 28465602 - 28465451
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | | ||||||||||||||||||||    
T  28465602 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcaa-ttttagtcctatctccctat 28465504  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| ||||  || ||||||||||||||||||||||    
T  28465503 ttccaactccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 554 - 624
Target Start/End: Original strand, 6616779 - 6616849
Alignment:
Q  554 ttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  6616779 ttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 624
Target Start/End: Complemental strand, 19529184 - 19529063
Alignment:
Q  503 ctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaa 602  Q
    ||||||| ||| ||| |||||||||| |||||||||||        |||||||||| |||||||| |||||||||||  | ||||||||||||||||||     
T  19529184 ctcttttaaattgaacaaaatcgtctttaaactatatgtttttttgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacag 19529085  T
Q  603 ttttagtccaaccacctatgct 624  Q
    |||||||||||||| |||||||    
T  19529084 ttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 36168350 - 36168506
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc--cagttttagtcctatct 565  Q
    |||||||||| || |||  |||||||| ||| |||||||||| ||||||| |||||||||  |||| ||||||          ||||||||||| |||||    
T  36168350 cttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgtttttttttgcagttttagtcttatct 36168449  T
Q  566 ccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||| ||||||||||||||| | |||||||| || |||||||||||||||||    
T  36168450 ccctatttctaactccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 229604 - 229529
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| ||||| |||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  229604 cagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 36168774 - 36168701
Alignment:
Q  551 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| |||| ||| ||||||||||||||||||||||    
T  36168774 gttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 553 - 622
Target Start/End: Original strand, 46736760 - 46736829
Alignment:
Q  553 tttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  46736760 tttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 487 - 624
Target Start/End: Original strand, 35193348 - 35193483
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | |||||||||||||  ||||||| ||||||||| ||||||||||||       | |||||||||||||||| ||||||| ||||| ||||||    
T  35193348 acgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatct-cctattttcaacttcagaaa 35193445  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||| |||||||||| |||||| || ||| ||||||||    
T  35193446 cgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 28166105 - 28166180
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||||||| | ||||| | ||||||||||||||    
T  28166105 cagttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 16214940 - 16214865
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| | |||||| ||||||| ||||||||||||| |||| |||||| | ||||||||||||||||||||||    
T  16214940 cagttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 229262 - 229337
Alignment:
Q  549 cagttttagtcctatctccct-atttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| ||| |||||| |||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||    
T  229262 cagttttagttcta-ctcccttattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgct 229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 576
Target Start/End: Complemental strand, 26974751 - 26974662
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttcca 576  Q
    |||||||| |||||||||||||| ||||||| ||||| ||| ||||||||||||        ||||||||||| ||||| ||||||||||    
T  26974751 acgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgcagttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 17504075 - 17504149
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| |||| ||||| |||||||||||||| | |||||||||| |||||| || ||| ||||||||    
T  17504075 cagttttagtcctacctcc-tattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 566 - 617
Target Start/End: Complemental strand, 18965564 - 18965513
Alignment:
Q  566 ccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccac 617  Q
    |||||||| |||||||| ||||||||| |||||||| |||||||||||||||    
T  18965564 ccctattttcaactccataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 18965241 - 18965306
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaac 614  Q
    |||||||||| ||| |||| ||||| |||||| ||||||||| | |||||||| ||||||||||||    
T  18965241 cagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 584
Target Start/End: Complemental strand, 35644003 - 35643968
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccaga 584  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35644003 cagttttagtcttatctccctatttccaactccaga 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 582
Target Start/End: Complemental strand, 33778057 - 33778024
Alignment:
Q  549 cagttttagtcctatctccctatttccaactcca 582  Q
    |||||||||| |||||||||||||||||||||||    
T  33778057 cagttttagttctatctccctatttccaactcca 33778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 5e-42; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 10278569 - 10278725
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  ||||||||||||| ||||||| ||||||||| ||||||||||||        |||||||||||||||||||    
T  10278569 cttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatctcc 10278668  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    | |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10278669 ccatttgcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 30786792 - 30786948
Alignment:
Q  468 cttgcattttaacgaacttacgaaa-ttcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctc 566  Q
    |||||||||| || |||| |||||| || |||||||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||||||||||    
T  30786792 cttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctc 30786890  T
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||| ||||||    
T  30786891 cctatttccaactccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 44582082 - 44582233
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||       | |||||||||||||||||  | |    
T  44582082 cattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgttttttgc-agttttagtcctatctctttgt 44582180  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  44582181 ttccaactccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 34555400 - 34555557
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctc 566  Q
    |||||||||| || ||||  ||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||         ||||||||||||||||||    
T  34555400 cttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttacagttttagtcctatctc 34555499  T
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||    
T  34555500 cctatttccaactccagaaacgcacagaaatgatagttttagttcaaccacatatgct 34555557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 52336031 - 52335880
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| | |||||| |||||||||||||| ||||||| ||||||||| |||||||||||        | |||||||||| |||||||||||    
T  52336031 cattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatattttttttgc-agttttagtcatatctccctat 52335933  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  52335932 ttccaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 469 - 624
Target Start/End: Complemental strand, 444075 - 443921
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccc 568  Q
    ||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||  ||||||||||||       | |||||||||||||||||||    
T  444075 ttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgttttttgc-agttttagtcctatctccc 443977  T
Q  569 tatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||| |||||| || |||||||| ||||||||||||||||||||||    
T  443976 tatttccaattccataaacgcgcataaatgacagttttagtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 500 - 622
Target Start/End: Complemental strand, 8230134 - 8230013
Alignment:
Q  500 tacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaaatga 599  Q
    |||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  8230134 tacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcatatccccctatttccaactccagaaacgcacagaaatga 8230036  T
Q  600 caattttagtccaaccacctatg 622  Q
    || ||||||||||||||||||||    
T  8230035 cagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 34555903 - 34555750
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctcccta 570  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||         ||||||||||| ||||||||||    
T  34555903 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagttttagtcatatctcccta 34555804  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34555803 tttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 499 - 624
Target Start/End: Original strand, 8229689 - 8229816
Alignment:
Q  499 ctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc--cagttttagtcctatctccctatttccaactccagaaacgcacagaaa 596  Q
    |||| |||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||    
T  8229689 ctacatcttttaaatcgaataaaatcgtctctaaactatatgtttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaa 8229788  T
Q  597 tgacaattttagtccaaccacctatgct 624  Q
    ||||| |||||||||||| || ||||||    
T  8229789 tgacagttttagtccaactacatatgct 8229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 16298703 - 16298858
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||||||||| |    
T  16298703 cttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctac 16298801  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||  |||||||| | |||||| | ||||||||||||||||||||||    
T  16298802 ctatttccaactctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 17641809 - 17641734
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  17641809 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 21938664 - 21938739
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  21938664 cagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 469 - 624
Target Start/End: Original strand, 37421182 - 37421338
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctcc 567  Q
    ||||||||| || || | |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||         ||||||||||| ||| |||    
T  37421182 ttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcatatttcc 37421281  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  37421282 ctatttccaactccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 44954671 - 44954596
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  44954671 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 16299127 - 16299055
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16299127 cagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 1837526 - 1837681
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| |  |||| ||||||||  || || ||||||| ||||||| ||||| ||| ||||||||||||       | |||||||||| |||||||    
T  1837526 cttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgttttttgc-agttttagtcatatctcc 1837624  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  1837625 ctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 9992256 - 9992331
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  9992256 cagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 29438951 - 29439107
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||| |||        ||||||||||||||||||     
T  29438951 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttttttgcagttttagtcctatctct 29439050  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| ||| || | |||| |||| |||| ||| ||||||||||||||||||||||    
T  29439051 ctattttcaattcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 4080042 - 4080195
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||||| || || |||| ||||||||  || ||||| |||| ||||||| ||||||||| ||||||||||||       | |||||||||| |||||||    
T  4080042 cttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgttttttac-agttttagtcatatctcc 4080140  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||    
T  4080141 ctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 1744428 - 1744500
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  1744428 cagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 37505513 - 37505438
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  37505513 cagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 487 - 622
Target Start/End: Complemental strand, 2868214 - 2868080
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | |||||||||||||| ||||||| ||||||||| ||| ||||||||       | |||||||||| |||| |||||||||||||||||||||    
T  2868214 acgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgttttttgc-agttttagtcatatccccctatttccaactccagaaa 2868116  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||| || ||||| ||||||||||||||| ||||    
T  2868115 cgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 550 - 622
Target Start/End: Original strand, 17641467 - 17641539
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  17641467 agttttagttctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 6224800 - 6224875
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 482 - 622
Target Start/End: Complemental strand, 10279058 - 10278922
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||        ||||||||||||||||||| ||| |||||||||    
T  10279058 aactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt----cagttttagtcctatctccatatatccaactcc 10278963  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||| ||||||||||||| ||||||||||||||| ||||    
T  10278962 agaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 469 - 624
Target Start/End: Original strand, 23340205 - 23340359
Alignment:
Q  469 ttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctc-taaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||||||| || |||| |||||||| |||||| ||||||| ||||||| ||||||| ||| ||||||||||        | |||||||||| |||||||    
T  23340205 ttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcg-ctcataaactatatattttttgc-agttttagtcatatctcc 23340302  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     ||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  23340303 ttatttccaactccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 44954327 - 44954402
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  44954327 cagttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 624
Target Start/End: Complemental strand, 44582541 - 44582427
Alignment:
Q  511 aatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa-cgcacagaaatgacaattttagt 609  Q
    ||||||| |||||||||| |||||||||||        ||||||||||| | ||||||||||| || ||||| ||| ||||||||||||||| |||||||    
T  44582541 aatcgaacaaaatcgtctttaaactatatgtttttttgcagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagt 44582442  T
Q  610 ccaaccacctatgct 624  Q
    |||||||||||||||    
T  44582441 ccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 9833596 - 9833522
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  9833596 cagttttagtcctacc-ccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 9992600 - 9992525
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||| |||||||||||||||||||| |||||||||||||||  |||||||||| ||||| |||||||| |||||||    
T  9992600 cagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 50304883 - 50304958
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||||||||||| ||||||| |||| |||| ||||| |||||||| ||||||||||||||||    
T  50304883 cagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 30787214 - 30787142
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||| ||||||||| |||||||| ||| ||| |||||||||| |||||||||||| |||||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgct 30787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 29021308 - 29021234
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| || | |||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  29021308 cagttttagtcttacc-ccctattttcaactccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 612
Target Start/End: Original strand, 37505092 - 37505232
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | || ||| || |||| ||||||| |||||||||  |||||||||||        ||||||||||||||| |||||||    
T  37505092 cattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatttccctat 37505191  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtcca 612  Q
    || |||||||| ||| | |||||||||||| ||||||||||    
T  37505192 tttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 45048176 - 45048314
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || ||||||||||| | || ||||||||||| ||| ||| |||||||||  |||||||||||        |||||||||||||| || |    
T  45048176 cttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttg-cagttttagtcctacct-c 45048273  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
     ||||| |||||||||||||||| |||||| ||| ||||||    
T  45048274 atattttcaactccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 50305227 - 50305152
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||||||| |||||||| |||| |||| |||||||| ||||| |||||| || ||||||    
T  50305227 cagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaactacttatgct 50305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 614
Target Start/End: Original strand, 2868012 - 2868077
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaac 614  Q
    ||||||||||| ||| ||||||| || ||||||| ||||||||| |||||||| ||||||||||||    
T  2868012 cagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 540
Target Start/End: Original strand, 50304463 - 50304532
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatg 540  Q
    ||||||| || |||| |||||| | ||| |||||||||| ||||||| ||||||||||||||||||||||    
T  50304463 gcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 608
Target Start/End: Original strand, 39485105 - 39485224
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | |||||||||||||  ||||||| ||||||||| ||||||||||||        ||||||||||||||||| ||||||| ||||| ||||||    
T  39485105 acgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttg-cagttttagtcctatct-cctattttcaacttcagaaa 39485202  T
Q  587 cgcacagaaatgacaattttag 608  Q
    | || ||| |||||| ||||||    
T  39485203 cacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 50926333 - 50926408
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||  |  ||||||| ||||||||||||| |||| |||||  | ||||||||||||||||||||||    
T  50926333 cagttttagtccttacctcctattttcaactccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 50926686 - 50926611
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||  | |||||||| |||||||| |||| |||| |||||  | ||||||||||||||||||||||    
T  50926686 cagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgct 50926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 23526759 - 23526833
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||   | |||||||| |||||||| ||||||||||||||||| | |||||| |||||| |||||||    
T  23526759 cagttttagtccctgccccctattttcaactccaaaaacgcacagaaatgac-agtttagtacaaccatctatgct 23526833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 607
Target Start/End: Complemental strand, 4636392 - 4636356
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaatttta 607  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  4636392 tttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 597
Target Start/End: Complemental strand, 45048580 - 45048533
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaat 597  Q
    |||||||||||||| |||| ||||| |||||||||||||||| ||||||    
T  45048580 cagttttagtcctacctcc-tattttcaactccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 27245224 - 27245380
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| | |||| |||||        |||||||||||||||||||    
T  27245224 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttttgcagttttagtcctatctcc 27245323  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27245324 ttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 39388793 - 39388636
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||        |||||||||||||||||||    
T  39388793 cttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttgcagttttagtcctatctcc 39388694  T
Q  568 ctatttccaactccagaaacgcac-agaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||| |||||||| | |||||||| ||||||||||||||| ||||||    
T  39388693 ctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 28688024 - 28687869
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  || |||||||||| ||||||| ||||||||| ||||||||||||       | | |||||||||||||| |    
T  28688024 cttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-acttttagtcctatcttc 28687926  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28687925 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 9181937 - 9181779
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnn--ccagttttagtcctatct 565  Q
    |||||||||| || || | ||||||||  || |||||||||| ||||||| ||||||||| ||||||||||||         ||||||||||||||||||    
T  9181937 cttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttttccagttttagtcctatct 9181838  T
Q  566 ccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9181837 ccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 7732509 - 7732664
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| |  |||| |||||||| |||||||||||||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||    
T  7732509 cttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctcc 7732607  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  7732608 ctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 25637218 - 25637374
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||||| || || |||| | |||||| |||||||||||||| ||||||| ||||||||| ||||||||||||         ||||||||||||||||||    
T  25637218 cttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgtagttttagtcctatctcc 25637317  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||    
T  25637318 ctatttccaactccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 468 - 622
Target Start/End: Complemental strand, 16081824 - 16081671
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  ||||||||||||| ||||||| |||||| || ||||||||||||       | ||||||||||||||||||    
T  16081824 cttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgttttttgc-agttttagtcctatctcc 16081726  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||    
T  16081725 ctatttccaactccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 9181633 - 9181708
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 14311336 - 14311492
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||||||||||| |||| |  ||||| ||  |||||||||| ||| ||||||||||||| ||||||||||||        |||||||| ||||||||||    
T  14311336 cttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgtttttttacagttttaatcctatctcc 14311435  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  14311436 ctatttccaactccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 25637719 - 25637568
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||    
T  25637719 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctat 25637621  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25637620 ttccaactccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 624
Target Start/End: Complemental strand, 48248089 - 48247961
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaa 595  Q
    |||||| || |||| ||||||| |||||||||  |||||||||||        |||||||||||| ||||||||||||||||||||||||||||||||||    
T  48248089 gtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaa 48247990  T
Q  596 atgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||||||||||||    
T  48247989 atgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 496 - 622
Target Start/End: Complemental strand, 14311784 - 14311659
Alignment:
Q  496 gtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgcacagaa 595  Q
    |||||| || |||| ||||||| |||||||||| |||||||||||       | |||||||||| |||||||||||||||||||| ||||||||||||||    
T  14311784 gtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgc-agttttagtcttatctccctatttccaactctagaaacgcacagaa 14311686  T
Q  596 atgacaattttagtccaaccacctatg 622  Q
    |||||||||||||||||||||||||||    
T  14311685 atgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 487 - 624
Target Start/End: Original strand, 26026357 - 26026494
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||||| ||| |||||||||| ||||||| |||||||||  |||||||||||        ||||||||||| ||||||||||||| ||||||||||||    
T  26026357 acgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgcagttttagtcttatctccctattttcaactccagaaa 26026456  T
Q  587 cgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| ||||||| ||||||| ||||||    
T  26026457 cgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 11973927 - 11973772
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || ||| ||||||||| || ||||||||||| ||| ||| ||||||||| ||||| || |||       | ||||||||| |||||| |    
T  11973927 cttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttgc-agttttagttctatcttc 11973829  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  11973828 ctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 35161327 - 35161171
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||||        ||||||||||| |||||||    
T  35161327 cttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcatatctcc 35161228  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| ||||||||| |||||| | |||| | || ||||||||||||    
T  35161227 ctatttccaactccataaacgcacataaatgatagttttgggccgaccacctatgct 35161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 24929833 - 24929673
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc----cagttttagtcctat 563  Q
    |||||||||| || |||| |||||||| ||| |||||||||| |||| || ||||||||| |||||||||||             |||||||||||||||    
T  24929833 cttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatttttttttgcagttttagtcctat 24929734  T
Q  564 ctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  24929733 ctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 48247608 - 48247767
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc---cagttttagtcctatc 564  Q
    |||||||||| |  |||| |||||||| |||||||||||||| |||| || ||||||||| ||||| |||||            ||||||||||| ||||    
T  48247608 cttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattttttttttgcagttttagtcatatc 48247707  T
Q  565 tccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  48247708 tccctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 468 - 622
Target Start/End: Complemental strand, 26048471 - 26048319
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||| |||| || |||| |||||||| |||||||||||||| |||| || ||||| |||  |||||||||||        ||||||||||| |||||||    
T  26048471 cttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgtttttg--cagttttagtcatatctcc 26048374  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||    
T  26048373 ctatttccaactccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 5745740 - 5745815
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5745740 cagttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 550 - 624
Target Start/End: Original strand, 15712467 - 15712541
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||    
T  15712467 agttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 786884 - 786957
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||    
T  786884 cagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 559 - 624
Target Start/End: Original strand, 26048059 - 26048124
Alignment:
Q  559 cctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26048059 cctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 27245646 - 27245574
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  27245646 ttttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 11971439 - 11971514
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||| || |||||| |||| |||||||| ||||||||||||||||||||||    
T  11971439 cagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 16081400 - 16081475
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||    
T  16081400 cagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 26026763 - 26026688
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  26026763 cagttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 5746081 - 5746009
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||||    
T  5746081 ttttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaatcacctatgct 5746009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 552 - 624
Target Start/End: Complemental strand, 7732929 - 7732857
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||| |||||| |||||||||||||||||||    
T  7732929 ttttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 625
Target Start/End: Complemental strand, 2758209 - 2758067
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | || ||||||||||| ||||||| |||||||||  |||||||||||       | || ||||||| |||| ||||||||| ||||||    
T  2758209 aactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgc-aggtttagtcatatccccctatttctaactcc 2758111  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatgcta 625  Q
    ||||||||| | |||||||| ||||||||||||||| |||||||    
T  2758110 agaaacgcatataaatgacagttttagtccaaccacttatgcta 2758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 34595293 - 34595142
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactat-atgnnnnnnnccagttttagtcctatctcccta 570  Q
    |||||| || |||| |||||| | ||||| | |||||| ||||||| ||||||||| ||||||||| |||        |||||||||| ||| | || ||    
T  34595293 cattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgtttttg--cagttttagtgctaccccctta 34595196  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  34595195 ttttcaactccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 552 - 623
Target Start/End: Original strand, 35160906 - 35160976
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgc 623  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||| | |||||||||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccag-agcgcacagaaatgatagttttagtccaaccacctatgc 35160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 473 - 624
Target Start/End: Complemental strand, 787306 - 787152
Alignment:
Q  473 attttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnncc---agttttagtcctatctccct 569  Q
    ||||| || |||| |||||| | |||||||||||||| ||||||| ||||||||| ||||||||| ||            |||||||||| ||||| | |    
T  787306 attttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatttgtagttttagtcttatcttcat 787207  T
Q  570 atttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||| |||||||||||||||||| |||||| | ||||||||||||||| ||||||    
T  787206 attttcaactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 586
Target Start/End: Original strand, 5333901 - 5334018
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||| | ||| |||||||||| ||||||| ||||||||| ||||||||||||        ||||||||||| |||| ||    
T  5333901 cttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg-cagttttagtcatatcccc 5333999  T
Q  568 ctatttccaactccagaaa 586  Q
    |||||||| ||||||||||    
T  5334000 ctatttcctactccagaaa 5334018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 28687694 - 28687746
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgaca 601  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  28687694 cagttctagtcctatcttcctatttccaactccagaaacgcacataaatgaca 28687746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 610
Target Start/End: Complemental strand, 33881029 - 33880969
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtc 610  Q
    ||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||    
T  33881029 cagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 552 - 600
Target Start/End: Original strand, 5184498 - 5184546
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgac 600  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatgac 5184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 539
Target Start/End: Complemental strand, 5334340 - 5334273
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatat 539  Q
    |||||| || |||| |||||| | |||||||||||||| ||||||| ||||||||| |||||||||||    
T  5334340 cattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 34594684 - 34594758
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||| | |||||||| |||||| ||||||  ||| |||||| | ||||||||||||||||||||||    
T  34594684 cagttttagtcctacc-ccctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 9394175 - 9394117
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||||||||||| ||||||||||| || |||| || |||||||||| ||||||    
T  9394175 cagttttagtcctatctcc-tatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 567 - 608
Target Start/End: Original strand, 35579017 - 35579058
Alignment:
Q  567 cctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||| |||||||||||||||| |||||||||| ||||||    
T  35579017 cctattttcaactccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 31073667 - 31073512
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || | || |||||||| ||| |||||||||| ||||||| ||||| ||| ||||||||||||       | ||||||||||||||||||    
T  31073667 cttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgtgc-agttttagtcctatctcc 31073569  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31073568 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 31574250 - 31574095
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||       | |||||||||| |||||||    
T  31574250 cttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcatatctcc 31574152  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31574151 ctattttcaactccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 468 - 615
Target Start/End: Complemental strand, 5120994 - 5120848
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  ||||||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||    
T  5120994 cttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctcc 5120896  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaacc 615  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  5120895 ctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 25472534 - 25472382
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||| || || |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  25472534 cattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 25472435  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  25472434 ttccagctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 28636641 - 28636566
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28636641 cagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 31573826 - 31573901
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  31573826 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 482 - 624
Target Start/End: Original strand, 5114503 - 5114644
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||||||||||||    
T  5114503 aactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctatttccaactcc 5114601  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||    
T  5114602 agaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 25468874 - 25469027
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnc-cagttttagtcctatctcccta 570  Q
    |||||| || |||| |||||||| ||| || ||||||| ||||||| ||||||||| ||||||||||||         ||||||||||||||||||||||    
T  25468874 cattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttgcagttttagtcctatctcccta 25468973  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||  || ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  25468974 ttttaaattccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 29891525 - 29891453
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  29891525 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 29891105 - 29891256
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||||||||||||  || |||||||||| || |||| |||| |||| ||||||||||||       | | ||||| | ||||||||||||    
T  29891105 cattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgttttttacaa-ttttaattctatctccctat 29891203  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29891204 ttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 550 - 621
Target Start/End: Complemental strand, 30251135 - 30251064
Alignment:
Q  550 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  30251135 agttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 482 - 624
Target Start/End: Complemental strand, 24640696 - 24640555
Alignment:
Q  482 aacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactcc 581  Q
    |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | |||||||||| |||||||||||||||||||||    
T  24640696 aactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcttatctccctatttccaactcc 24640598  T
Q  582 agaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
      |||||||||||||||||| || |||||||||||||||||||    
T  24640597 gaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 553 - 624
Target Start/End: Original strand, 30250796 - 30250867
Alignment:
Q  553 tttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||    
T  30250796 tttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgct 30250867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 592
Target Start/End: Original strand, 28636318 - 28636435
Alignment:
Q  473 attttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatt 572  Q
    ||||| || |||| |||||||| ||| ||| |||||| ||||||| ||||||||  ||||||||||||        ||||||||||| ||||||||||||    
T  28636318 attttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatgtttttg--cagttttagtcatatctccctatt 28636415  T
Q  573 tccaactccagaaacgcaca 592  Q
    |||||||||| ||| |||||    
T  28636416 tccaactccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 588
Target Start/End: Original strand, 31073251 - 31073290
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacg 588  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  31073251 cagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 608
Target Start/End: Complemental strand, 20741522 - 20741485
Alignment:
Q  571 tttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  20741522 tttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 16175871 - 16175719
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||||| ||| |||||||||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  16175871 catttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 16175772  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16175771 ttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 38007971 - 38008127
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||        ||||||||||| |||||||    
T  38007971 cttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcatatctcc 38008070  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||    
T  38008071 ctatttccaactccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 43216234 - 43216079
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||| |||| || |||| |||||||| |||||||||||||| ||||||| ||||||||| |||||||||||        | |||||||||||||||||     
T  43216234 cttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgc-agttttagtcctatctct 43216136  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43216135 ctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 42192765 - 42192612
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | |||||||||||||| ||||||| ||||||||| |||||||| |||        ||||||||||| |||| |||||    
T  42192765 gcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttttgcagttttagtcatatcccccta 42192666  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42192665 tttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 4808900 - 4809055
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  ||||||||||||| ||||||| |||||||||  |||||||||||         |||||||||||||||| |    
T  4808900 cttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgt-agttttagtcctatcttc 4808998  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4808999 ctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 20128262 - 20128107
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||| |||| || |||||||||  |||||||||||       | | ||||||||||||||||    
T  20128262 cttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgttttttgcaa-ttttagtcctatctcc 20128164  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  20128163 ctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 4355776 - 4355929
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| ||  ||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||    
T  4355776 cttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctcc 4355874  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  4355875 ctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 11540160 - 11540008
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || |||| |||||| | |||||||||||||| ||||||| |||||||||  |||||||||||       | |||||||||| ||| ||||||    
T  11540160 gcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgc-agttttagtcatatatcccta 11540062  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11540061 tttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 32418180 - 32418333
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| |||||||||||||  ||||||| ||||||||| |||||||||||        | |||||||||| |||||||    
T  32418180 cttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatatattttttgc-agttttagtcatatctcc 32418276  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32418277 ttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 616
Target Start/End: Original strand, 15550694 - 15550842
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||| | || |||| |||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||        ||||||||||||||| |||    
T  15550694 cttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcctatttcc 15550793  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaacca 616  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  15550794 ctattttcaactccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 33920633 - 33920788
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| ||||||||  || |||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||    
T  33920633 cttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgc-agttttagtcctatctcc 33920731  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  33920732 ctattttcaactccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 33921133 - 33920981
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||| ||||||| |||        |||||||||||||||||||||||    
T  33921133 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttttgcagttttagtcctatctccctat 33921034  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  33921033 ttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 42192265 - 42192416
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||||||||||||||||    
T  42192265 cattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctccctat 42192363  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||| ||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  42192364 ttctaactccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Original strand, 649548 - 649702
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    ||||||| || || ||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||       | ||||||||| || |||||    
T  649548 cttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc-agttttagttctgtctcc 649646  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||    
T  649647 ctatttccaactccagaaacgcacataaatgac-gttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 5560995 - 5560920
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5560995 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 11539662 - 11539814
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||||||  | |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||    
T  11539662 cattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 11539761  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11539762 ttccaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 16953459 - 16953304
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| | |||||| |||||||||||||| ||||||| ||||  ||| ||||| ||||||       | ||||||||||||||||||    
T  16953459 cttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttgc-agttttagtcctatctcc 16953361  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  16953360 ctatttccaactccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 487 - 621
Target Start/End: Original strand, 20127776 - 20127910
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||        |||||||||||||||||||||||||||||| |||||||    
T  20127776 acgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctatttccaaccccagaaa 20127875  T
Q  587 cgcacagaaatgacaattttagtccaaccacctat 621  Q
    |||||| ||||||||||||||||||||||||||||    
T  20127876 cgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 622
Target Start/End: Original strand, 43160030 - 43160184
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| |  |||| |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||          |||||||||||||||||||    
T  43160030 cttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgcagttttagtcctatctcc 43160129  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||| |||||||||||||||||| |||||||| |||||||| |||||||||||    
T  43160130 ctattttcaactccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 472 - 621
Target Start/End: Original strand, 6949476 - 6949625
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  | |||||||||        |||||||||||||||||||||||    
T  6949476 cattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttttgcagttttagtcctatctccctat 6949575  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctat 621  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6949576 ttccaactccataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 487 - 616
Target Start/End: Original strand, 13399462 - 13399590
Alignment:
Q  487 acgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaa 586  Q
    |||||||| ||| |||||||||| ||| ||| ||||||||| ||||||||||||       | |||||||||||||||||||||||||||||||||||||    
T  13399462 acgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgttttttgc-agttttagtcctatctccctatttccaactccagaaa 13399560  T
Q  587 cgcacagaaatgacaattttagtccaacca 616  Q
    ||||||||||||||| |||||||| |||||    
T  13399561 cgcacagaaatgacagttttagtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 472 - 624
Target Start/End: Original strand, 62982 - 63133
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||||||||| |||  ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||    
T  62982 cattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctat 63080  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  63081 ttccaactcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 9330320 - 9330164
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||| |||||||||| ||||||| ||||||||| | ||||||||||        ||||||||||||||||| |    
T  9330320 cttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgcagttttagtcctatctac 9330221  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||| |||||  |||||| || |||||||||| ||||||||||||||||||||||    
T  9330220 ctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 472 - 622
Target Start/End: Complemental strand, 43160532 - 43160382
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| |||||||  ||||||||  |||||||||||        |||||||||||||||||||||||    
T  43160532 cattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttttgcagttttagtcctatctccctat 43160433  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  43160432 ttccaactccagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 38008472 - 38008321
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | |||||| || |||| ||||||| |||||||||  |||||||||||       | ||||||||||||||||||||||    
T  38008472 cattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc-agttttagtcctatctccctat 38008374  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| |||||| | ||||||||||||||||||||||    
T  38008373 ttccaactccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 44219745 - 44219820
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  44219745 cagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 13315597 - 13315673
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccag-aaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  13315597 cagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 63403 - 63328
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  63403 cagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 4356201 - 4356126
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4356201 cagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 16953040 - 16953113
Alignment:
Q  551 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  16953040 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 17061011 - 17061084
Alignment:
Q  551 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  17061011 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 4809324 - 4809249
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||||||||    
T  4809324 cagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 13399865 - 13399790
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||||||||||||    
T  13399865 cagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 15551119 - 15551044
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||| ||||||    
T  15551119 cagttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 471 - 624
Target Start/End: Complemental strand, 44220167 - 44220013
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccc-- 568  Q
    ||||||| || |||| |||||| | ||| ||||| |||| |||| || ||||||||| ||||||||||||         |||||||||| ||||||||      
T  44220167 gcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgttttttgt-agttttagtcatatctccccc 44220069  T
Q  569 tatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  44220068 tatttccaactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 43215810 - 43215883
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||| ||||||||||||| |||||||| ||||| | |||||||||| ||||||||||||||||||||    
T  43215810 cagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

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Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 609
Target Start/End: Complemental strand, 24140124 - 24140064
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagt 609  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  24140124 cagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

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Target: chr2; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 22445741 - 22445816
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| |||||||||||||| ||||| ||||||| |||| |||||||| |||||||| |||||||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgct 22445816  T

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Target: chr2; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 552 - 624
Target Start/End: Original strand, 9329985 - 9330056
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||||||| ||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagt-caaccacttatgct 9330056  T

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Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 586
Target Start/End: Complemental strand, 6949969 - 6949850
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactata-tgnnnnnnnccagttttagtcctatctc 566  Q
    |||||||||| || |||| |||||||| ||||||| |||||| ||| ||| ||||||||| |||||||||| |         ||||||||||||||||||    
T  6949969 cttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttttttgcagttttagtcctatctc 6949870  T
Q  567 cctatttccaactccagaaa 586  Q
    | |||||| |||||||||||    
T  6949869 catatttcaaactccagaaa 6949850  T

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Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 13569089 - 13569033
Alignment:
Q  213 cggcaacggagactccgccgattccggcggcccatgaagcgcgacggtggagaacgg 269  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||| ||||||||||    
T  13569089 cggcaactgagactccgccgattccgacggcccatgaaaagcgacgatggagaacgg 13569033  T

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Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 549 - 624
Target Start/End: Complemental strand, 28143474 - 28143400
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||  ||| ||||| |||||||||||||||| |||||||||| |||||| || ||| ||||||||    
T  28143474 cagttttagtcctacgtcc-tattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

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Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 25336125 - 25335977
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcc 567  Q
    |||||||||| || |||| |||||||| ||||||| |||||| ||||||| ||||||||| ||||| |||||         ||||||||||| |||        
T  25336125 cttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttttgcagttttagtcatat---- 25336030  T
Q  568 ctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
        |||||||| || |||  |||| |||||||| ||||||||||||||||||||||    
T  25336029 ----ttccaactacaaaaattcacataaatgacacttttagtccaaccacctatgct 25335977  T

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Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 590
Target Start/End: Complemental strand, 32418640 - 32418550
Alignment:
Q  499 ctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctatttccaactccagaaacgca 590  Q
    ||||||||||| ||||||| |||||||||  ||||||||||        | ||||||| || |||||||||||||||||||| |||||||||    
T  32418640 ctacctcttttaaatcgaacaaaatcgtccttaaactatatattttttgc-agttttaatcttatctccctatttccaactctagaaacgca 32418550  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 608
Target Start/End: Complemental strand, 11090960 - 11090904
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    |||| |||||||||||   |||| ||||||||||||||| | |||||||||||||||    
T  11090960 ttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 608
Target Start/End: Original strand, 18450935 - 18450991
Alignment:
Q  552 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttag 608  Q
    ||||||||||| ||||   |||| ||||||||||||||| |||||||||| ||||||    
T  18450935 ttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 622
Target Start/End: Original strand, 24139954 - 24140006
Alignment:
Q  571 tttccaactccagaaacgc-acagaaatgacaattttagtccaaccacctatg 622  Q
    ||||||||||||||||  | ||| ||||||||||||||||| |||||||||||    
T  24139954 tttccaactccagaaaatctacaaaaatgacaattttagtctaaccacctatg 24140006  T

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Target: scaffold0097 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 471 - 624
Target Start/End: Original strand, 46290 - 46443
Alignment:
Q  471 gcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctcccta 570  Q
    ||||||| || ||||||||||| | || ||||||||||| ||||||| |||||| || ||||||||||||        ||||||||||| ||||||||||    
T  46290 gcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttttgcagttttagtcatatctcccta 46389  T
Q  571 tttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||| |||| ||| ||||| |||||||| ||||||||||||||||||||||    
T  46390 tttccaattccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

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Target: scaffold0097; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 472 - 624
Target Start/End: Complemental strand, 46789 - 46637
Alignment:
Q  472 cattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtcctatctccctat 571  Q
    |||||| || |||| |||||| | ||||||  | |||| ||||||| |||||||||| |||||||||||         ||||||||| ||||| ||||||    
T  46789 cattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgtttttttgtagttttagttctatcaccctat 46690  T
Q  572 ttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  46689 ttccaactccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

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Target: scaffold0025 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 78418 - 78493
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  78418 cagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

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Target: scaffold0712 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 6921 - 6761
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtccta----t 563  Q
    |||||||||| || || |||||||||| ||| ||| |||||| ||||||| ||||||||  |||||||| |||        ||||||||||||||    |    
T  6921 cttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgcagttttagtcctacctat 6822  T
Q  564 ctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  6821 ctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6761  T

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Target: scaffold0712; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 6493 - 6568
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||    
T  6493 cagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

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Target: scaffold0709 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 468 - 624
Target Start/End: Complemental strand, 6939 - 6779
Alignment:
Q  468 cttgcattttaacgaacttacgaaattcgtcctacctcttttcaatcgaataaaatcgtctctaaactatatgnnnnnnnccagttttagtccta----t 563  Q
    |||||||||| || || |||||||||| ||| ||| |||||| ||||||| ||||||||  |||||||| |||        ||||||||||||||    |    
T  6939 cttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgcagttttagtcctacctat 6840  T
Q  564 ctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  6839 ctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 6511 - 6586
Alignment:
Q  549 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaaccacctatgct 624  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||    
T  6511 cagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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