View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0929_low_50 (Length: 251)

Name: NF0929_low_50
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0929_low_50
NF0929_low_50
[»] chr7 (55 HSPs)
chr7 (10-250)||(3147866-3148106)
chr7 (135-251)||(3562554-3562669)
chr7 (135-251)||(27869316-27869432)
chr7 (135-251)||(31493978-31494093)
chr7 (135-251)||(20636686-20636802)
chr7 (135-251)||(35337643-35337759)
chr7 (136-251)||(21224473-21224588)
chr7 (135-239)||(20638558-20638662)
chr7 (135-251)||(42271399-42271515)
chr7 (135-251)||(13577907-13578021)
chr7 (136-251)||(19919724-19919837)
chr7 (149-251)||(26126336-26126437)
chr7 (147-249)||(48176086-48176186)
chr7 (135-239)||(2331080-2331184)
chr7 (135-239)||(18754399-18754503)
chr7 (135-251)||(19195334-19195450)
chr7 (135-239)||(39182004-39182105)
chr7 (148-251)||(5111520-5111622)
chr7 (152-251)||(11843299-11843396)
chr7 (152-251)||(14624688-14624785)
chr7 (148-239)||(24464656-24464747)
chr7 (152-247)||(24597640-24597734)
chr7 (152-251)||(36746624-36746722)
chr7 (152-251)||(41452370-41452468)
chr7 (154-251)||(4193637-4193733)
chr7 (135-251)||(17305832-17305948)
chr7 (135-251)||(4571464-4571579)
chr7 (137-239)||(10655399-10655500)
chr7 (152-239)||(21225681-21225766)
chr7 (152-246)||(9157176-9157269)
chr7 (152-250)||(10023906-10024003)
chr7 (135-251)||(8526863-8526978)
chr7 (135-239)||(25002776-25002878)
chr7 (165-251)||(15681727-15681813)
chr7 (151-212)||(15681681-15681742)
chr7 (151-239)||(44078003-44078091)
chr7 (163-239)||(39440253-39440329)
chr7 (159-250)||(24448165-24448256)
chr7 (151-200)||(6798085-6798134)
chr7 (135-239)||(23439660-23439765)
chr7 (151-244)||(26385345-26385437)
chr7 (151-239)||(3403184-3403272)
chr7 (151-251)||(43251348-43251447)
chr7 (179-250)||(9822221-9822292)
chr7 (179-250)||(10724146-10724217)
chr7 (190-250)||(14196944-14197006)
chr7 (148-239)||(23461154-23461245)
chr7 (190-251)||(6650632-6650693)
chr7 (152-228)||(21264200-21264276)
chr7 (155-251)||(47113202-47113298)
chr7 (148-251)||(19493400-19493501)
chr7 (148-239)||(33237546-33237637)
chr7 (194-251)||(46267367-46267425)
chr7 (66-119)||(12384091-12384144)
chr7 (150-198)||(15093922-15093970)
[»] chr6 (37 HSPs)
chr6 (67-235)||(4370897-4371065)
chr6 (135-251)||(18791424-18791540)
chr6 (135-251)||(24603428-24603544)
chr6 (135-251)||(4597526-4597642)
chr6 (152-251)||(31210879-31210977)
chr6 (152-251)||(35102612-35102710)
chr6 (138-247)||(4013791-4013900)
chr6 (135-251)||(14572299-14572414)
chr6 (135-251)||(25819752-25819867)
chr6 (152-251)||(8412843-8412941)
chr6 (152-251)||(26710428-26710526)
chr6 (135-239)||(22968288-22968391)
chr6 (135-239)||(23820002-23820105)
chr6 (135-251)||(32451793-32451909)
chr6 (135-251)||(34833992-34834108)
chr6 (152-249)||(3118764-3118860)
chr6 (135-251)||(22269475-22269589)
chr6 (135-239)||(15298552-15298656)
chr6 (135-239)||(24051075-24051179)
chr6 (171-239)||(12291550-12291618)
chr6 (135-237)||(12427298-12427402)
chr6 (135-239)||(2636845-2636948)
chr6 (156-239)||(9241742-9241823)
chr6 (151-249)||(26240039-26240138)
chr6 (164-250)||(19282333-19282418)
chr6 (197-251)||(20863849-20863903)
chr6 (137-231)||(32682419-32682512)
chr6 (138-251)||(16415451-16415564)
chr6 (158-251)||(18749217-18749309)
chr6 (135-211)||(18749288-18749365)
chr6 (68-117)||(20863951-20864000)
chr6 (194-250)||(23124842-23124898)
chr6 (156-239)||(24615827-24615908)
chr6 (151-200)||(2058993-2059042)
chr6 (67-121)||(3488033-3488087)
chr6 (148-239)||(14195639-14195731)
chr6 (179-239)||(34528259-34528319)
[»] scaffold0267 (1 HSPs)
scaffold0267 (135-251)||(3689-3803)
[»] chr4 (33 HSPs)
chr4 (135-251)||(15058939-15059055)
chr4 (135-251)||(13826540-13826655)
chr4 (135-251)||(13397796-13397912)
chr4 (135-251)||(5304468-5304583)
chr4 (152-250)||(1588535-1588631)
chr4 (151-251)||(51291290-51291390)
chr4 (155-251)||(4357340-4357435)
chr4 (135-251)||(27018282-27018397)
chr4 (135-251)||(35475358-35475472)
chr4 (152-251)||(4098741-4098840)
chr4 (135-249)||(19232466-19232581)
chr4 (136-249)||(4433306-4433419)
chr4 (135-251)||(41877149-41877263)
chr4 (152-249)||(9195787-9195882)
chr4 (158-251)||(41034727-41034819)
chr4 (135-251)||(52838296-52838410)
chr4 (152-251)||(43793752-43793850)
chr4 (135-249)||(55780454-55780567)
chr4 (135-249)||(55844634-55844747)
chr4 (157-251)||(2715838-2715930)
chr4 (135-232)||(9397258-9397356)
chr4 (135-239)||(25011802-25011906)
chr4 (152-251)||(2931406-2931504)
chr4 (135-239)||(45633504-45633608)
chr4 (190-250)||(25618749-25618809)
chr4 (149-203)||(48158678-48158732)
chr4 (164-239)||(15795414-15795488)
chr4 (135-251)||(6789080-6789195)
chr4 (152-251)||(15734484-15734581)
chr4 (63-116)||(18705403-18705456)
chr4 (154-239)||(24626353-24626438)
chr4 (63-122)||(18704413-18704472)
chr4 (205-237)||(43336075-43336107)
[»] scaffold0025 (2 HSPs)
scaffold0025 (135-251)||(19351-19465)
scaffold0025 (135-251)||(61881-61997)
[»] chr5 (34 HSPs)
chr5 (135-251)||(245662-245777)
chr5 (135-251)||(18695071-18695186)
chr5 (135-251)||(16901118-16901233)
chr5 (135-251)||(25556996-25557112)
chr5 (151-251)||(17825618-17825717)
chr5 (149-239)||(23040081-23040173)
chr5 (148-249)||(37961371-37961472)
chr5 (139-239)||(23765523-23765622)
chr5 (139-239)||(23815371-23815470)
chr5 (151-239)||(34125143-34125231)
chr5 (152-251)||(26639158-26639256)
chr5 (135-249)||(31055437-31055551)
chr5 (148-251)||(41663644-41663747)
chr5 (149-251)||(17704708-17704808)
chr5 (153-251)||(40428760-40428857)
chr5 (152-249)||(10379367-10379462)
chr5 (135-251)||(19169410-19169526)
chr5 (135-239)||(36641210-36641314)
chr5 (155-239)||(38476602-38476686)
chr5 (135-239)||(10293220-10293324)
chr5 (135-239)||(38408696-38408799)
chr5 (152-251)||(16307597-16307696)
chr5 (135-200)||(8645864-8645930)
chr5 (66-239)||(462765-462937)
chr5 (66-239)||(7187189-7187360)
chr5 (190-251)||(8673977-8674038)
chr5 (135-200)||(35302086-35302151)
chr5 (152-251)||(7835795-7835892)
chr5 (65-116)||(8674078-8674129)
chr5 (151-200)||(20653904-20653952)
chr5 (148-200)||(23040210-23040263)
chr5 (192-233)||(36954510-36954551)
chr5 (193-233)||(24025177-24025217)
chr5 (135-191)||(32466015-32466070)
[»] chr8 (29 HSPs)
chr8 (135-251)||(4518988-4519104)
chr8 (135-251)||(17648310-17648426)
chr8 (135-251)||(19391508-19391624)
chr8 (147-251)||(38630135-38630238)
chr8 (135-251)||(12723382-12723498)
chr8 (152-251)||(4807721-4807819)
chr8 (152-251)||(8802521-8802618)
chr8 (152-250)||(30784386-30784483)
chr8 (135-251)||(19924332-19924448)
chr8 (135-251)||(32400443-32400559)
chr8 (155-251)||(22452294-22452389)
chr8 (135-251)||(44147039-44147153)
chr8 (152-251)||(5192392-5192490)
chr8 (148-251)||(21666395-21666497)
chr8 (137-251)||(33895443-33895557)
chr8 (149-239)||(18881636-18881726)
chr8 (135-251)||(7117235-7117350)
chr8 (135-202)||(21929972-21930039)
chr8 (147-251)||(31268359-31268462)
chr8 (152-239)||(3208065-3208151)
chr8 (135-200)||(1824674-1824737)
chr8 (135-200)||(1859119-1859182)
chr8 (148-239)||(4423162-4423254)
chr8 (148-239)||(18253019-18253109)
chr8 (192-251)||(23565214-23565272)
chr8 (155-245)||(2053264-2053354)
chr8 (149-239)||(41688243-41688333)
chr8 (148-233)||(3380279-3380363)
chr8 (66-122)||(22255572-22255628)
[»] chr3 (46 HSPs)
chr3 (135-251)||(26628146-26628262)
chr3 (135-251)||(30155266-30155382)
chr3 (135-251)||(3780948-3781061)
chr3 (135-250)||(27852873-27852988)
chr3 (135-249)||(28173852-28173966)
chr3 (154-251)||(3328934-3329030)
chr3 (135-251)||(8542677-8542793)
chr3 (135-251)||(48907413-48907529)
chr3 (135-251)||(26633480-26633593)
chr3 (152-251)||(4522039-4522137)
chr3 (135-249)||(23428742-23428856)
chr3 (135-251)||(13080961-13081077)
chr3 (152-239)||(22416418-22416505)
chr3 (152-251)||(28155003-28155101)
chr3 (135-249)||(46673170-46673284)
chr3 (152-251)||(25179663-25179761)
chr3 (147-249)||(10743488-10743588)
chr3 (152-251)||(22447861-22447963)
chr3 (135-244)||(4775918-4776027)
chr3 (135-251)||(22500716-22500832)
chr3 (155-239)||(25336443-25336527)
chr3 (152-251)||(8339061-8339159)
chr3 (135-249)||(25022786-25022900)
chr3 (68-251)||(26127027-26127207)
chr3 (190-251)||(3821004-3821065)
chr3 (154-251)||(34878650-34878746)
chr3 (136-200)||(46387745-46387809)
chr3 (148-251)||(26177077-26177179)
chr3 (152-239)||(48860787-48860873)
chr3 (153-227)||(33279729-33279803)
chr3 (166-251)||(31039098-31039182)
chr3 (135-251)||(40836299-40836414)
chr3 (152-200)||(20001794-20001842)
chr3 (151-228)||(9496361-9496437)
chr3 (155-222)||(34296529-34296596)
chr3 (150-199)||(32315002-32315051)
chr3 (155-212)||(49657940-49657996)
chr3 (152-236)||(1743334-1743417)
chr3 (135-236)||(35201131-35201231)
chr3 (205-251)||(6927607-6927653)
chr3 (138-200)||(18388871-18388933)
chr3 (149-191)||(23320443-23320484)
chr3 (68-121)||(26177204-26177257)
chr3 (190-239)||(32960775-32960823)
chr3 (135-200)||(36311219-36311283)
chr3 (148-200)||(33105022-33105073)
[»] chr1 (31 HSPs)
chr1 (135-251)||(24962020-24962136)
chr1 (135-251)||(19078046-19078161)
chr1 (135-251)||(19125936-19126051)
chr1 (137-251)||(29676148-29676262)
chr1 (135-249)||(46432339-46432453)
chr1 (135-251)||(24749865-24749981)
chr1 (135-251)||(48471984-48472100)
chr1 (152-251)||(24196346-24196444)
chr1 (152-249)||(51719245-51719340)
chr1 (152-251)||(3616884-3616982)
chr1 (135-249)||(43706777-43706890)
chr1 (135-239)||(2425292-2425395)
chr1 (148-236)||(47685182-47685269)
chr1 (152-239)||(4059655-4059741)
chr1 (152-251)||(29182121-29182219)
chr1 (135-244)||(16551771-16551881)
chr1 (153-251)||(27092973-27093070)
chr1 (135-239)||(9387760-9387865)
chr1 (150-239)||(16971933-16972022)
chr1 (152-212)||(21148063-21148123)
chr1 (138-239)||(4455175-4455277)
chr1 (135-239)||(2657645-2657749)
chr1 (151-239)||(18606816-18606904)
chr1 (148-232)||(22786111-22786194)
chr1 (148-251)||(2260499-2260602)
chr1 (135-251)||(28920778-28920888)
chr1 (135-239)||(10684860-10684965)
chr1 (148-239)||(21185286-21185375)
chr1 (172-239)||(31084745-31084811)
chr1 (164-233)||(28552456-28552525)
chr1 (196-251)||(16858458-16858514)
[»] chr2 (27 HSPs)
chr2 (152-251)||(2986771-2986869)
chr2 (135-251)||(11175974-11176090)
chr2 (152-251)||(38716278-38716376)
chr2 (135-251)||(30714395-30714511)
chr2 (135-250)||(9051149-9051264)
chr2 (135-249)||(4587928-4588042)
chr2 (152-251)||(9787644-9787742)
chr2 (67-239)||(331711-331884)
chr2 (135-251)||(6763838-6763954)
chr2 (152-249)||(15700832-15700928)
chr2 (135-251)||(15735131-15735247)
chr2 (149-239)||(2190614-2190704)
chr2 (165-251)||(17368314-17368399)
chr2 (135-251)||(18537949-18538065)
chr2 (135-239)||(22191113-22191217)
chr2 (135-251)||(25298922-25299038)
chr2 (135-251)||(36464341-36464455)
chr2 (136-251)||(25884298-25884413)
chr2 (190-251)||(15147835-15147896)
chr2 (150-250)||(4104946-4105045)
chr2 (151-251)||(26829210-26829309)
chr2 (164-233)||(2123471-2123540)
chr2 (138-239)||(28365581-28365681)
chr2 (151-251)||(14743401-14743501)
chr2 (151-251)||(22387189-22387288)
chr2 (136-180)||(15147813-15147857)
chr2 (164-228)||(33199549-33199613)
[»] scaffold0001 (1 HSPs)
scaffold0001 (135-251)||(142068-142183)
[»] scaffold1202 (1 HSPs)
scaffold1202 (135-239)||(1907-2011)
[»] scaffold0607 (1 HSPs)
scaffold0607 (135-251)||(2170-2286)
[»] scaffold1875 (1 HSPs)
scaffold1875 (135-239)||(889-993)
[»] scaffold0179 (1 HSPs)
scaffold0179 (135-250)||(5771-5886)
[»] scaffold0406 (1 HSPs)
scaffold0406 (156-251)||(2080-2174)
[»] scaffold0087 (1 HSPs)
scaffold0087 (152-251)||(25085-25183)
[»] scaffold0062 (2 HSPs)
scaffold0062 (152-249)||(49744-49840)
scaffold0062 (152-249)||(62283-62379)
[»] scaffold0060 (1 HSPs)
scaffold0060 (139-251)||(66246-66357)
[»] scaffold0419 (1 HSPs)
scaffold0419 (152-251)||(3081-3179)
[»] scaffold0291 (1 HSPs)
scaffold0291 (138-251)||(9992-10104)
[»] scaffold0150 (1 HSPs)
scaffold0150 (144-239)||(5907-6003)
[»] scaffold0174 (1 HSPs)
scaffold0174 (148-239)||(29797-29887)
[»] scaffold0002 (2 HSPs)
scaffold0002 (148-239)||(455107-455198)
scaffold0002 (148-212)||(455011-455075)
[»] scaffold0103 (1 HSPs)
scaffold0103 (135-239)||(3061-3164)
[»] scaffold0064 (1 HSPs)
scaffold0064 (190-250)||(54492-54552)
[»] scaffold0050 (2 HSPs)
scaffold0050 (67-116)||(81017-81066)
scaffold0050 (69-117)||(79834-79882)
[»] scaffold0024 (1 HSPs)
scaffold0024 (148-235)||(43961-44047)
[»] scaffold0007 (1 HSPs)
scaffold0007 (186-251)||(250639-250703)
[»] scaffold0014 (1 HSPs)
scaffold0014 (155-239)||(112214-112298)
[»] scaffold0084 (1 HSPs)
scaffold0084 (194-250)||(4637-4694)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 3147866 - 3148106
Alignment:
Q  10 aacaatataaaattaatagtaaattaaattctgatctgggtcacatgtatttaagaaaggcttaaacgcactatccatcccctaagtctgcaaaagtagc 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  3147866 aacaaaataaaattaatagtaaattaaattctgatctgggtcacatgtatttaagaaaggcttaaacgcactatccaactcctaagtctgcaaaagtagc 3147965  T
Q  110 gattttggtcccacattnnnnnnnntggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttga 209  Q
    ||||||||||||| |||        |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3147966 gattttggtcccatattaaaaaaaatggcaaaaattatccccatgtttagggatatatgctcttttgatcccctaaaataatggaaatatgctcctttga 3148065  T
Q  210 ccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  3148066 ccctttaactttacaaaaaattgcaattatagccctttttt 3148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 3562669 - 3562554
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  3562669 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 3562571  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  3562570 attatggcccctttttt 3562554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 27869432 - 27869316
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  27869432 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 27869334  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  27869333 gattatggcccctttttt 27869316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 31493978 - 31494093
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| || ||||||||||| |||||||||  |||||||| ||| |||||||||||||||||    
T  31493978 tggcaaaagtgacccctatgtttagggaaatatgctcttttgaccctctaacataaggaaaatatgct-ttttgaccccttatctttacaaaaagttgcg 31494076  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  31494077 attatggcccctttttt 31494093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 20636686 - 20636802
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  20636686 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 20636784  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  20636785 gattatgacccctttttt 20636802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 35337759 - 35337643
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  35337759 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 35337661  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  35337660 gattatgacccctttttt 35337643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 21224588 - 21224473
Alignment:
Q  136 ggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    ||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  21224588 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 21224490  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||| ||||||    
T  21224489 attatggcccttttttt 21224473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 20638558 - 20638662
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  20638558 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 20638656  T
Q  234 gattat 239  Q
    ||||||    
T  20638657 gattat 20638662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 42271399 - 42271515
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| |||  |||||||||||||||    
T  42271399 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatgtttacaaaaagttgc 42271497  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||| ||||||    
T  42271498 gattatggcccttttttt 42271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 13578021 - 13577907
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||| ||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||| || ||||||||||||      
T  13578021 tggcaaaagtgacccctatgtttaaggaaatatgctcttttga-cccctaacataagggaaatatgctt-tttgaccctttatctatacaaaaagttgaa 13577924  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  13577923 attatggcccctttttt 13577907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 19919837 - 19919724
Alignment:
Q  136 ggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    ||||||| ||| ||||||||||||| | |||||||||||||| | |||||||||||| ||||||| |  |||||||| ||| ||||||||||||||| ||    
T  19919837 ggcaaaagtgacccccatgtttaggaa-atatgctcttttgacctcctaacataaggaaaatatgttt-tttgaccccttatctttacaaaaagttgtga 19919740  T
Q  236 ttatagcccctttttt 251  Q
    ||||||||||||||||    
T  19919739 ttatagcccctttttt 19919724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 26126336 - 26126437
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttt 248  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||||||| || |||||||| ||| |||  ||||||||||||||||| |||||| |    
T  26126336 cccatgtttagggaaatatgcttttttga-cccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcccctgt 26126434  T
Q  249 ttt 251  Q
    |||    
T  26126435 ttt 26126437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 48176186 - 48176086
Alignment:
Q  147 tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccct 246  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  |||||    
T  48176186 tccctatgtttagggaaatatgctcttttga-cccctaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatgacccct 48176089  T
Q  247 ttt 249  Q
    |||    
T  48176088 ttt 48176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 2331080 - 2331184
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||| | ||| ||||||||||||||||    
T  2331080 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgactccttatctttacaaaaagttgc 2331178  T
Q  234 gattat 239  Q
    ||||||    
T  2331179 gattat 2331184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 18754503 - 18754399
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| |||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| |||||||||| |||||    
T  18754503 tggcaaaagtgatcctctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaatgttgc 18754405  T
Q  234 gattat 239  Q
    ||||||    
T  18754404 gattat 18754399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 19195450 - 19195334
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||| |||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||||     
T  19195450 tggcaaaagtgaccccctatgtttagggaaatacgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgt 19195352  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  19195351 gattatggcccctttttt 19195334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 39182004 - 39182105
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||||||| ||||||||||||||| ||||||||||||||  || |||||||||||||||||| || |||||||| ||| |||  ||||||||||||    
T  39182004 tggcaaaaatga-ccccatgtttagggaaatatgctcttttga--ccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcg 39182100  T
Q  235 attat 239  Q
    |||||    
T  39182101 attat 39182105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 5111520 - 5111622
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||||| | ||||| |||||||| |||||||||||||||||||||| |  |||||||| ||| |||  ||||||||||||||||| |||||||    
T  5111520 ccccatgtttaggaaaatatgttcttttga-cccctaacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgattatggcccctt 5111618  T
Q  248 tttt 251  Q
    ||||    
T  5111619 tttt 5111622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 11843396 - 11843299
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||||  |||||||| ||| | |||||||||||||| ||||| |||||||||||    
T  11843396 atgtttagggaaatatgctcttttga-cccctaacataaggaaaatatgctt-tttgaccccttatccttacaaaaagttgcaattatggcccctttttt 11843299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 14624688 - 14624785
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||| | |||||||||||||| ||| ||||||||||||||||| ||  |||||||||||| |||||||||||||||| ||||| |||||||||||    
T  14624688 atgtttaggaaaatatgctcttttga-cccataacataagggaaatatactt-tttgaccctttatctttacaaaaagttgcaattatggcccctttttt 14624785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 24464656 - 24464747
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||| || |||||||| ||| |||  ||||| |||||||||||    
T  24464656 ccccatgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattat 24464747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 24597734 - 24597640
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||  |||||||||||||||||||||| |||||||    
T  24597734 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttctctttacaaaaagttgcgattatggcccctt 24597640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 36746722 - 36746624
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | ||||||||||| ||||||||| | ||| |||| ||| ||||||||||||||||||||||  ||||||||||    
T  36746722 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgc-cttttaaccccttatctttacaaaaagttgcgattatgacccctttttt 36746624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 41452468 - 41452370
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||| ||||| ||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  41452468 atgtttagggaaatatactcttctgacctcctaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcgattatgacccctttttt 41452370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 4193637 - 4193733
Alignment:
Q  154 gtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||| |||||||||||||| ||| ||||||||| |||||||| || |||||||| ||| |||| ||||||||||| ||||| |||||||||||    
T  4193637 gtttagggaaatatgctcttttga-cccttaacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaattatggcccctttttt 4193733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 17305832 - 17305948
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||| | |||||||||||||| | ||||||||||||||||||||||  |||||||| |||  |||||||||||||| |    
T  17305832 tggcaaaagtgacccctatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatttttacaaaaagttgtg 17305930  T
Q  235 attat-agcccctttttt 251  Q
    ||||| | ||||||||||    
T  17305931 attatgaccccctttttt 17305948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 4571579 - 4571464
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||| | ||| |||||||||||||||||| || |||||||| ||| |||  ||||||||||||    
T  4571579 tggcaaaagtga-cccaatgtttagggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcg 4571481  T
Q  235 attatagcccctttttt 251  Q
    ||| | |||||| ||||    
T  4571480 attgtggcccctgtttt 4571464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 10655399 - 10655500
Alignment:
Q  137 gcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||| |||||||  |  ||| |||| ||| ||||||||||||||||||    
T  10655399 gcaaaaatgatcccctatgtttagggaaatatgctcttttaatcccctaatataagagaaatat--ttttttaaccccttatctttacaaaaagttgcga 10655496  T
Q  236 ttat 239  Q
    ||||    
T  10655497 ttat 10655500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 21225766 - 21225681
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| |   ||||||||||||||||||||||    
T  21225766 atgtttagggaaatatgctcttttga-cccctaacataagggaaatatgct-atttgacccctcgtctttacaaaaagttgcgattat 21225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 9157269 - 9157176
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccct 246  Q
    ||||||||| | |||||||||||||| ||||||||||||| |||||||| || |||||||  ||| |||  ||||||||||||||||||||||||    
T  9157269 atgtttaggaaaatatgctcttttga-cccctaacataagtgaaatatgatcttttgaccacttatcttctcaaaaagttgcgattatagcccct 9157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 10024003 - 10023906
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||| |||||||||||||| ||||| |||||||| ||||||  |  |||||||| ||| |||||||||||||||||| ||| ||||||||||    
T  10024003 atgtttagggaaatatgctcttttgacccccttacataaggaaaatat-tttttttgaccccttatctttacaaaaagttgcgaatatggccccttttt 10023906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 8526863 - 8526978
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| |||| ||||||||| | |||||||| ||||| | ||||||||||||||||||||||  ||||||||  ||  |||||||||||||||    
T  8526863 tggcaaaaatgaccccctatgtttaggaaaatatgctcatttgacctcctaacataagggaaatatgct-ttttgaccc-ctatttttacaaaaagttgc 8526960  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  8526961 aattatggcccctttttt 8526978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 25002776 - 25002878
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||||||| ||||||||||||||| | |||||||||||| |||||||||||| ||||||||| || |||||||| ||| |||  || ||| |||||    
T  25002776 tggcaaaaatga-ccccatgtttagggaaacatgctcttttga-cccctaacataaaggaaatatgatcttttgaccccttatcttctcataaatttgcg 25002873  T
Q  235 attat 239  Q
    |||||    
T  25002874 attat 25002878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 15681727 - 15681813
Alignment:
Q  165 tatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||| |||||||| ||||||||||||||||| |||| || |||||||| ||| |||  ||||||||||||||||| ||| |||||||    
T  15681727 tatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatggcctctttttt 15681813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 15681681 - 15681742
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccc 212  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||| || ||||||||    
T  15681681 catgtttagggaaatatgctcttttgaccccctaacataagggaactatgatcttttgaccc 15681742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 44078091 - 44078003
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttac-aaaaagttgcgattat 239  Q
    |||||||||||| |||||||||||||| | ||||||||||| |||||||| |  |||||||| ||| |||||| ||||||||||||||||    
T  44078091 catgtttagggaaatatgctcttttgacctcctaacataagagaaatatg-ttttttgaccccttatctttacaaaaaagttgcgattat 44078003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 39440329 - 39440253
Alignment:
Q  163 tatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||| |||||||| | |||||||||||||||||||| || ||||| || ||| |||| |||||||||||||||||    
T  39440329 tatatgatcttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagttgcgattat 39440253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 24448256 - 24448165
Alignment:
Q  159 gggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||| ||||||| |||||| |||||||||||||||||||||| |  | |||||| ||| |||||||||||  || |||||| ||||||||||    
T  24448256 gggaaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaaaatgtgattatggccccttttt 24448165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 6798134 - 6798085
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||    
T  6798134 catgtttagggaaatatgctcttttgaccctctaacataagggaaatatg 6798085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 23439660 - 23439765
Alignment:
Q  135 tggcaaaaatga-tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||||||||||| ||| ||||| | ||||||  | ||||| |||||||||||||||| ||||| || ||| ||||  ||||||||||    
T  23439660 tggcaaaagtgactccccatgtttaaggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagttgc 23439759  T
Q  234 gattat 239  Q
    ||||||    
T  23439760 gattat 23439765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 26385345 - 26385437
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccc 244  Q
    |||||||||||| ||||||| |||||| ||||||||||||| |||||||| |  |||||||  ||| |||  ||||||||||||||||| ||||    
T  26385345 catgtttagggaaatatgctattttga-cccctaacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatggccc 26385437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 3403272 - 3403184
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||| |||| | |||||||||||||| |||||||||||||||||||||| || ||||| || |||  ||  |||||| ||||||||||    
T  3403272 catgtataggaaaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttatgttctcaaaaacttgcgattat 3403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 43251348 - 43251447
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||| | || | ||||||||| || ||||||||||||||||||| || |||||| ||||| |||  ||||||||| |||||| || ||||||||    
T  43251348 catgtttaggaaaatgtactcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagttacgatta-agacccttttt 43251446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 9822292 - 9822221
Alignment:
Q  179 cccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||||||||||| | || |||||||| ||| |||  |||||||||||||||||  |||||||||    
T  9822292 cccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccccttttt 9822221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 10724217 - 10724146
Alignment:
Q  179 cccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||||||||||| | || |||||||| ||| |||  |||||||||||||||||  |||||||||    
T  10724217 cccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgaccccttttt 10724146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 14197006 - 14196944
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttaca--aaaagttgcgattatagccccttttt 250  Q
    |||||||||||||| |||||||||||| |||||||  ||||||||| ||||| ||||||||||    
T  14197006 agggaaatatgctcttttgaccctttatctttacaaaaaaagttgcaattatggccccttttt 14196944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 23461245 - 23461154
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| ||| ||||| | |||||| || ||||| |||| ||||||| ||| ||||| |||||| | || |||||||||||||||||    
T  23461245 ccccatgtttaaggaaatatgttattttgaccctctaacttaagagaaatattctcttttgatcctttatcatttcaaaaagttgcgattat 23461154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 6650632 - 6650693
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||||| |||||||| ||| |||  ||||||||||||||||| |||||| ||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatggcccctgtttt 6650693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 21264276 - 21264200
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaa 228  Q
    ||||||||||| ||||||| ||||||||| |||||| ||| ||||||| ||  ||||||| |||| ||||| |||||    
T  21264276 atgtttagggaaatatgctattttgatcctctaacagaagagaaatatacttttttgaccttttatctttataaaaa 21264200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 47113202 - 47113298
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| |||||||||||||  || ||| | | ||||||||| | || |||| ||||||| ||||| |||||||||||||| | |||||| ||||    
T  47113202 tttagggaaatatgctcttttggccctctatctttagggaaataagatcttttggccctttatctttataaaaagttgcgattttggcccctgtttt 47113298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 19493400 - 19493501
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||| ||| ||||||| |||||| |||| ||||||||| ||||||| |  |||||||||||| |||  ||||||| || |||||| ||||||     
T  19493400 ccccatgtttatggaaatatgctattttga-ccccaaacataaggaaaatatgattttttgaccctttatcttctcaaaaag-tgtgattatggcccctg 19493497  T
Q  248 tttt 251  Q
    ||||    
T  19493498 tttt 19493501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 33237637 - 33237546
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||||  |||||||||||| | ||||||| ||||||| |||||| |  |||||||| ||| |||   ||||||||| ||||||    
T  33237637 ccccatgtttagggcaatatgctcttttcaccccctaaaataagggtaatatgatattttgaccccttaccttctaaaaaagttgtgattat 33237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 46267425 - 46267367
Alignment:
Q  194 aaatatgctcctttgaccctttaactttacaaaaa-gttgcgattatagcccctttttt 251  Q
    |||||||||| |||||||  ||| ||||||||||| ||||||||||| |||||||||||    
T  46267425 aaatatgctcatttgacctattatctttacaaaaaagttgcgattatggcccctttttt 46267367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 12384091 - 12384144
Alignment:
Q  66 aaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtc 119  Q
    ||||||||||||||||||  | ||||||||| |||||||||||  |||||||||    
T  12384091 aaggcttaaacgcactatttaccccctaagtttgcaaaagtagtaattttggtc 12384144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 15093970 - 15093922
Alignment:
Q  150 ccatgtttagggatatatgctcttttgatcccctaacataagggaaata 198  Q
    ||||||||||||| ||| |||||||| | ||||||||| ||||||||||    
T  15093970 ccatgtttagggaaataagctcttttaaccccctaacaaaagggaaata 15093922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 4370897 - 4371065
Alignment:
Q  67 aggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtcccacattnnnnnnnntggcaaaaatgatcc-ccatgtttagggatat 165  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||| | |   ||        |||||||| ||| || ||||||||||||| ||    
T  4370897 aggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttggcctccttttaaaaaaaatggcaaaagtgaccctccatgtttagggaaat 4370996  T
Q  166 atgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4370997 atgctcttttga-cccctaacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcga 4371065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 18791424 - 18791540
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| | | ||||||||||||||||    
T  18791424 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgct-ttttgacccctcatctttacaaaaagttgc 18791522  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  18791523 gattatggcccctttttt 18791540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 24603428 - 24603544
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  24603428 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 24603526  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  24603527 gattatggcccctttttt 24603544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 4597642 - 4597526
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| |||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  4597642 tggcaaaaatgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 4597544  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  4597543 aattatggcccctttttt 4597526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 31210879 - 31210977
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||| | |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  31210879 atgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgattatagcacctttttt 31210977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 35102710 - 35102612
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  35102710 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcaattatggcccctttttt 35102612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 4013900 - 4013791
Alignment:
Q  138 caaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatt 237  Q
    ||||| ||| ||||||||||||||| |||||||||||||| ||||||| |||||||||||||| || |||||||| ||| |||  ||||| |||||||||    
T  4013900 caaaagtgacccccatgtttagggaaatatgctcttttgaccccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgatt 4013801  T
Q  238 atagcccctt 247  Q
    || |||||||    
T  4013800 atggcccctt 4013791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 14572414 - 14572299
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| ||||||||||||||   ||||||||||||||||||||||  |||||||| ||| ||||| |||||||||||    
T  14572414 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacatcctaacataagggaaatatgct-ttttgaccccttatctttataaaaagttgcg 14572316  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||| ||||||    
T  14572315 attatggcccttttttt 14572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 25819752 - 25819867
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||| ||||| ||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  25819752 tggcaaaagtgacccctatgtttagggaaatatactcttctgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 25819850  T
Q  235 attatagcccctttttt 251  Q
    |||||  ||||||||||    
T  25819851 attatgacccctttttt 25819867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 8412843 - 8412941
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| || |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  8412843 atgtttagagaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattatgacccctttttt 8412941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 26710526 - 26710428
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||||| |  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  26710526 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatggcccctttttt 26710428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 22968391 - 22968288
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  22968391 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccc-ttatctttacaaaaagttgc 22968294  T
Q  234 gattat 239  Q
    ||||||    
T  22968293 gattat 22968288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 23820002 - 23820105
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  23820002 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccc-ttatctttacaaaaagttgc 23820099  T
Q  234 gattat 239  Q
    ||||||    
T  23820100 gattat 23820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 32451793 - 32451909
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||||  || |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  32451793 tggcaaaagtgaccccctatgtttatagaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 32451891  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  32451892 gattatgacccctttttt 32451909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 34833992 - 34834108
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||| |    
T  34833992 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgacccgttatctttacaaaaagttac 34834090  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  34834091 aattatggcccctttttt 34834108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 3118764 - 3118860
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||  ||| ||||||||||| ||||||||||  ||||||||    
T  3118764 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacctcttatctttacaaaaatttgcgattatgacccctttt 3118860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 22269475 - 22269589
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| ||||| |||||||| ||| |||||||||||||||||| |  |||||||| ||| ||||||||||||||| |    
T  22269475 tggcaaaagtgacccctatgtttagggaaatatgttcttttga-cccttaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgtg 22269572  T
Q  235 attatagcccctttttt 251  Q
     |||| |||||||||||    
T  22269573 tttatggcccctttttt 22269589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 15298552 - 15298656
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | |||||||||||| ||||||| |  ||||| || ||| ||||||||||||||||    
T  15298552 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatg-ttttttgatcccttatctttacaaaaagttgc 15298650  T
Q  234 gattat 239  Q
    ||||||    
T  15298651 gattat 15298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 24051075 - 24051179
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||| ||||||| ||  |||||||| |||  |||||||||||||||    
T  24051075 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagagaaatatact-ttttgaccccttatatttacaaaaagttgc 24051173  T
Q  234 gattat 239  Q
    ||||||    
T  24051174 gattat 24051179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 12291618 - 12291550
Alignment:
Q  171 cttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||| |||||||||||||||||||||| || |||||||||||| |||  |||||||||||||||||    
T  12291618 cttttgaccccctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagttgcgattat 12291550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 12427298 - 12427402
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttac-aaaaagttg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||||| ||  |||||||| ||||||||| |  ||| |||||||| |||||| |||||||||    
T  12427298 tggcaaaagtgatcccccatgtttagggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaaagttg 12427397  T
Q  233 cgatt 237  Q
    |||||    
T  12427398 cgatt 12427402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 2636845 - 2636948
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| | |||| ||| |||||| | ||||| | ||||| ||||||||||||||| |||||||||  |||||||| |||  ||||||||||||||||    
T  2636845 tggcaaaagttatccacatatttaggaaaatatgtttttttg-tcccctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcg 2636943  T
Q  235 attat 239  Q
    |||||    
T  2636944 attat 2636948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 9241742 - 9241823
Alignment:
Q  156 ttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||||| || |||||||| ||| |||  |||||||||||||||||    
T  9241742 ttagggaaatatgttcttttga--ccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 9241823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 26240039 - 26240138
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccct-aacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    |||||||| ||| |||||||||||||| ||||| ||||||||||||||||| || |||||||| ||| |||   |||||||||| |||||  ||||||||    
T  26240039 catgtttacggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatcttctaaaaaagttgcaattatgacccctttt 26240138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 19282418 - 19282333
Alignment:
Q  164 atatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||| |||||| | |||||||||||||||||||||   |||||||| ||| |||| |||||||||||||||||  |||||||||    
T  19282418 atatgctattttgaactcctaacataagggaaatatgcat-tttgaccccttatcttttcaaaaagttgcgattatgaccccttttt 19282333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 20863903 - 20863849
Alignment:
Q  197 tatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  20863903 tatgctcttttgaccccttatctttacaaaaagttgcgattatggcccctttttt 20863849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 32682512 - 32682419
Alignment:
Q  137 gcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagtt 231  Q
    |||||| ||| ||| ||||||||||| |||||||||||||| | | |||||||| ||||||||| |  |||||||| ||| ||||||||||||||    
T  32682512 gcaaaagtgacccctatgtttagggaaatatgctcttttgacctcataacataaaggaaatatg-ttttttgaccccttatctttacaaaaagtt 32682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 16415564 - 16415451
Alignment:
Q  138 caaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatt 237  Q
    ||||| ||| ||| ||||||||||| ||||  |||||||| | |||||||||||||||||||| |  |||||||  ||| |||   ||||||||||||||    
T  16415564 caaaagtgacccctatgtttagggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatcttctaaaaaagttgcgatt 16415465  T
Q  238 atagcccctttttt 251  Q
    ||| ||| ||||||    
T  16415464 ataacccatttttt 16415451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 18749309 - 18749217
Alignment:
Q  158 agggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||| ||||| || ||||| | | ||||||||||||||||||||  |||||||| ||| ||||||||||||||| ||||||  ||||||||||    
T  18749309 agggaaatatgttcatttgacctcataacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgtgattatgtcccctttttt 18749217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 18749365 - 18749288
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgacc 211  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | | |||||||||||||||||| || |||||||    
T  18749365 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcttaacataagggaaatatgttcatttgacc 18749288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 20864000 - 20863951
Alignment:
Q  68 ggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttgg 117  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  20864000 ggcttaaacgcactattcatcccctaagtttgcaaaattagcgattttgg 20863951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 23124898 - 23124842
Alignment:
Q  194 aaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||  |||||||||    
T  23124898 aaatatgctcttttgaccccttatctttacaaaaagttgcgattatgaccccttttt 23124842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 24615908 - 24615827
Alignment:
Q  156 ttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||| |||||||||||||| ||||||||||| | ||||||||||  |||||||| ||  |||||| |||||||||||||||    
T  24615908 ttagggaaatatgctcttttga-cccctaacatatgagaaatatgctt-tttgacccattctctttactaaaagttgcgattat 24615827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 2059042 - 2058993
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  2059042 catgtttagggaaatatgctattttgacaccctaacataagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 3488033 - 3488087
Alignment:
Q  67 aggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtccc 121  Q
    ||||||||||||||| |  ||||||||||| |||||||||||  |||||||||||    
T  3488033 aggcttaaacgcactttttatcccctaagtttgcaaaagtagaaattttggtccc 3488087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 14195639 - 14195731
Alignment:
Q  148 ccccatgtttagggatatatgctctttt-gatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||| ||||| ||||| |||||| ||  | ||||||| ||||||||||| || |||  ||| |||  |||||||||||||||||||||    
T  14195639 ccccatgttaagggaaatatgttctttttgactctctaacatgagggaaatatggtcttttagccccttatttttacaaaaagttgcgattat 14195731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 34528259 - 34528319
Alignment:
Q  179 cccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||  |||||||| || |||||||| ||| |||  |||||||||||||||||    
T  34528259 cccctaacataaatgaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 34528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 3803 - 3689
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||||||||||| ||    
T  3803 tggcaaaagtga-ccccatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagtttcg 3706  T
Q  235 attatagcccctttttt 251  Q
    |||||||||||||||||    
T  3705 attatagcccctttttt 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 15059055 - 15058939
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  15059055 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgc 15058957  T
Q  234 gattatagcccctttttt 251  Q
    ||||||||||||||||||    
T  15058956 gattatagcccctttttt 15058939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 13826655 - 13826540
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| |||||| |||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  13826655 tggcaaaagtgacccctatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 13826557  T
Q  235 attatagcccctttttt 251  Q
    |||||||||||||||||    
T  13826556 attatagcccctttttt 13826540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 13397912 - 13397796
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  13397912 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 13397814  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  13397813 gattatggcccctttttt 13397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 5304583 - 5304468
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | |||||||||||| |||||||||  |||||||| ||| |||||||||||||||||    
T  5304583 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgct-ttttgaccccttatctttacaaaaagttgcg 5304485  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||| ||||||    
T  5304484 attatggcccatttttt 5304468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 1588631 - 1588535
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| |||||||||||||||||||||||||| ||||||    
T  1588631 atgtttagggaaatatgctcttttga-cccctaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatagcctcttttt 1588535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 51291390 - 51291290
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| || |||||||| ||| |||  |||||||||| |||||| ||||||||||    
T  51291390 catgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatggccccttttt 51291291  T
Q  251 t 251  Q
    |    
T  51291290 t 51291290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 4357340 - 4357435
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  4357340 tttagggaaatatgctcttttgaccttctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgattatggcccttttttt 4357435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 27018282 - 27018397
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||  ||||||||||| |||||||||||||| ||||||||| |||||||||||| |  |||||||| ||| | ||||||||||||||     
T  27018282 tggcaaaagtgacccatatgtttagggaaatatgctcttttgaccccctaacaaaagggaaatatg-ttttttgaccccttatccttacaaaaagttgca 27018380  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  27018381 attatggcccctttttt 27018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 35475358 - 35475472
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||| |||    
T  35475358 tggcaaaagtga-ccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagtagcg 35475455  T
Q  235 attatagcccctttttt 251  Q
    |||||  ||||||||||    
T  35475456 attatgacccctttttt 35475472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 4098741 - 4098840
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||||| || |||||||| ||| |||  ||||||||||| ||||  |||||||||||    
T  4098741 atgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattaaggcccctttttt 4098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 19232581 - 19232466
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| |||||||  ||||||||||| ||||||||||||||  ||||||||||||| ||||||| |  ||| |||| ||| ||||||||||||||||    
T  19232581 tggcaaaagtgatcccatatgtttagggaaatatgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgc 19232482  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  19232481 gattatgacccctttt 19232466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 4433419 - 4433306
Alignment:
Q  136 ggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    ||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| |  |||||||| ||| ||||||||||||||| |    
T  4433419 ggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataaggaaaatatg-ttttttgaccccttatctttacaaaaagttgtg 4433321  T
Q  235 attatagcccctttt 249  Q
    |||||  ||||||||    
T  4433320 attatgacccctttt 4433306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 41877263 - 41877149
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||  ||||||||    
T  41877263 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttac--aaagttgc 41877167  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  41877166 gattatgacccctttttt 41877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 9195882 - 9195787
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  9195882 atgtttagggaaatatgctcttttga-cccataacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatgacccctttt 9195787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 41034727 - 41034819
Alignment:
Q  158 agggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||| ||||| |||||||| | ||||||||||||||||||||||  |||||||| |||  ||||||||||||||||||||||| |||||||||    
T  41034727 agggaaatatgatcttttgacctcctaacataagggaaatatgctt-tttgaccccttatttttacaaaaagttgcgattatagtccctttttt 41034819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 52838296 - 52838410
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| |||| ||||||||| | |||||||||||||| | ||||||||| ||||||||||||  |||||||| ||| ||||||||||||||||    
T  52838296 tggcaaaaatgaccccctatgtttaggaa-atatgctcttttgacctcctaacatacgggaaatatgct-ttttgaccc-ttatctttacaaaaagttgc 52838392  T
Q  234 gattatagcccctttttt 251  Q
    |||||| | |||||||||    
T  52838393 gattatggtccctttttt 52838410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 43793850 - 43793752
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| |||  ||||||||||||||||| |||  ||||||||||    
T  43793850 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatatttacaaaaagttgcgaatatgacccctttttt 43793752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 55780454 - 55780567
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||| ||||| ||||||| |  |||||||| ||| ||||||||||||||||    
T  55780454 tggcaaaagtgaccccctatgtttagggaaatatgctcttttga-cccctaacctaaggaaaatatgttt-tttgaccccttatctttacaaaaagttgc 55780551  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  55780552 gattatgacccctttt 55780567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 55844634 - 55844747
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||| ||||| ||||||| |  |||||||| ||| ||||||||||||||||    
T  55844634 tggcaaaagtgaccccctatgtttagggaaatatgctcttttga-cccctaacctaaggaaaatatgttt-tttgaccccttatctttacaaaaagttgc 55844731  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  55844732 gattatgacccctttt 55844747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 2715930 - 2715838
Alignment:
Q  157 tagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||||  |||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  2715930 tagggaaatatgatcttttga-cccctaacatatgggaaatatgctt-tttgaccccttatctttacaaaaagttgcgattatggcccatttttt 2715838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 9397258 - 9397356
Alignment:
Q  135 tggcaaaaatgatc-cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttg 232  Q
    |||||||| ||||| ||||||| |||||| |||||||||||||| || ||||||||| ||||||||| |  ||| |||||||| |||||||||||||||    
T  9397258 tggcaaaagtgatctcccatgtatagggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttg 9397356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 25011802 - 25011906
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||  ||||| |  |||||||| ||| |||||||||||||||     
T  25011802 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggggatatg-ttttttgaccccttatctttacaaaaagttgg 25011900  T
Q  234 gattat 239  Q
    ||||||    
T  25011901 gattat 25011906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 2931406 - 2931504
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | | |||||||| |||||||||||  |||||||| ||| ||||||||||| |||||||| | ||||| |||||    
T  2931406 atgtttagggaaatatgctcttttgacctcataacataaaggaaatatgct-ttttgaccccttatctttacaaaaaattgcgattgtggccccgttttt 2931504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 45633504 - 45633608
Alignment:
Q  135 tggcaaaaatga-tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||||| |||| | |||||||||| |||||||||||| |||||||| ||| ||||  |||||||||     
T  45633504 tggcaaaagtgactccctatgtttagggaaatatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgt 45633602  T
Q  234 gattat 239  Q
    ||||||    
T  45633603 gattat 45633608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 25618809 - 25618749
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||||| |||||||| ||| ||||||||||||| |||||||| ||||||||||    
T  25618809 agggaaatatgctcttttgaccccttatctttacaaaaagtggcgattatggccccttttt 25618749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 48158678 - 48158732
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctc 203  Q
    |||||||||||||| ||||| |||||||| || ||||||||||||||||||||||    
T  48158678 cccatgtttagggaaatatgatcttttgaccctctaacataagggaaatatgctc 48158732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 15795414 - 15795488
Alignment:
Q  164 atatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||| | |||||||||||||||||| |||  ||||||| |||| |||| |||||||||| ||||||    
T  15795414 atatgctcttttgaactcctaacataagggaaataggct-ttttgaccttttatcttttcaaaaagttgggattat 15795488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 6789195 - 6789080
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||| ||| || | |||||||| || |||| ||| |  |||||||| ||| ||||||||||| ||||    
T  6789195 tggcaaaagtgaccccctatgtttagggaaatatgctgtttcgacctcctaacatgagagaaaaatgttt-tttgacccgttatctttacaaaaaattgc 6789097  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  6789096 gattat-gcccctttttt 6789080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 15734484 - 15734581
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataaggg-aaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||| ||||| ||||||||  |||||||||||||| |||||||| | |||||||| | |  |||||||||||||| ||| || ||||||||||    
T  15734484 atgtttagggaaatatgttcttttga--ccctaacataaggggaaatatgc-cttttgacccgtcatgtttacaaaaagttgtgataatggccccttttt 15734580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 18705456 - 18705403
Alignment:
Q  63 agaaaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttg 116  Q
    |||||||||||||||||||||  | ||||||||| |||||||||||| ||||||    
T  18705456 agaaaggcttaaacgcactatttaccccctaagtttgcaaaagtagcaattttg 18705403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 24626438 - 24626353
Alignment:
Q  154 gtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||| ||||||||||||||  |  |||||||||||||||||| || |||||| | ||| |||  |||||||||| ||||||    
T  24626438 gtttagggaaatatgctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtgattat 24626353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 18704472 - 18704413
Alignment:
Q  63 agaaaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtccca 122  Q
    |||||||||||||||||||||  | ||||||| | |||||||||||| ||||||| ||||    
T  18704472 agaaaggcttaaacgcactatttaccccctaattttgcaaaagtagcaattttggcccca 18704413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 43336107 - 43336075
Alignment:
Q  205 tttgaccctttaactttacaaaaagttgcgatt 237  Q
    |||||||||||| ||||||||||||||||||||    
T  43336107 tttgaccctttatctttacaaaaagttgcgatt 43336075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 19351 - 19465
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  19351 tggcaaaagtgacccctatgtttagggaaatatgctcttttga-cccctaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcg 19448  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  19449 attatggcccctttttt 19465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 61881 - 61997
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||||||||||   ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  61881 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacatcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 61979  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  61980 aattatggcccctttttt 61997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 245662 - 245777
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  245662 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 245760  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  245761 attatggcccctttttt 245777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 18695071 - 18695186
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||    
T  18695071 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcg 18695169  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  18695170 attatggcccctttttt 18695186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 16901233 - 16901118
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||||||    
T  16901233 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcg 16901135  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  16901134 attatggcccctttttt 16901118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 25557112 - 25556996
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  25557112 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 25557014  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  25557013 aattatggcccctttttt 25556996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 17825717 - 17825618
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||| || |||||||||||| |||  ||||||||||||||||| ||||||||||    
T  17825717 catgtttagggaaatatgctcttttga-cccctaacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatggccccttttt 17825619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 23040173 - 23040081
Alignment:
Q  149 cccatgtttagggatatatgctcttttga--tcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || |||||||| ||| |||  |||||||||||||||||    
T  23040173 cccatgtttagggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 23040081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 37961472 - 37961371
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||||||| ||| |||||||||| | |||||||||||||||| ||| || |||||||| |||||||  ||||||||||| ||||| |||||||    
T  37961472 ccccatgtttagggaaatacgctcttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgcaattatggcccctt 37961373  T
Q  248 tt 249  Q
    ||    
T  37961372 tt 37961371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 23765622 - 23765523
Alignment:
Q  139 aaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatta 238  Q
    |||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  ||||| | |||| |||||||||||||||||||||    
T  23765622 aaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgatcatttatctttacaaaaagttgcgatta 23765524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 23815470 - 23815371
Alignment:
Q  139 aaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatta 238  Q
    |||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  ||||| | |||| |||||||||||||||||||||    
T  23815470 aaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgatcatttatctttacaaaaagttgcgatta 23815372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 34125143 - 34125231
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||  ||| |||  |||||||||||||||||    
T  34125143 catgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagttgcgattat 34125231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 26639256 - 26639158
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||   |||||||| ||| |||||||||||||||| ||||| ||| |||||||    
T  26639256 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgc-gttttgaccccttatctttacaaaaagttgcaattatggcctctttttt 26639158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 31055551 - 31055437
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| ||| |||||||||||||||||| |  |||||||| ||| ||||||||||| ||||    
T  31055551 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccttaacataagggaaatatg-ttttttgaccccttatctttacaaaaaattgc 31055453  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  31055452 gattatgacccctttt 31055437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 41663747 - 41663644
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |  |||||| |||||  ||  |||||| |||||||||| |||||||    
T  41663747 ccccatgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttttgactctttattttctcaaaaaattgcgattatggcccctt 41663648  T
Q  248 tttt 251  Q
    ||||    
T  41663647 tttt 41663644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 17704808 - 17704708
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttt 248  Q
    |||||||||||| | |||||||||||||| ||| ||||||||||||||||| ||  |||||||||||| |||||||||||||||  ||||| ||||||||    
T  17704808 cccatgtttaggaaaatatgctcttttga-cccataacataagggaaatatactt-tttgaccctttatctttacaaaaagttgaaattatggccccttt 17704711  T
Q  249 ttt 251  Q
    |||    
T  17704710 ttt 17704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 40428857 - 40428760
Alignment:
Q  153 tgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||| ||||| |||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||| ||||||||||  ||||||||||    
T  40428857 tgtttagggaaatatgttcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaaattgcgattatgacccctttttt 40428760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 10379367 - 10379462
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  10379367 atgtttaggaaaatatgctcttttga-cccctaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatgacccctttt 10379462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 19169410 - 19169526
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| |||||||| ||||||||| | |||||||| ||||| | | ||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  19169410 tggcaaaagtgatcccctatgtttaggaaaatatgctcatttgacctcttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 19169508  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||| ||||||    
T  19169509 aattatggcccatttttt 19169526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 36641210 - 36641314
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||||| || |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||| ||||||||||    
T  36641210 tggcaaaagtgagcccctatgtttagagaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacccgttatctttataaaaagttgc 36641308  T
Q  234 gattat 239  Q
    ||||||    
T  36641309 gattat 36641314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 38476686 - 38476602
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||| || |||||||| ||| |||  |||||||||||||||||    
T  38476686 tttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 38476602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 10293324 - 10293220
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| |||| |||||| |||| |||||||||||||| | |||||||||||||||||||| |  |||||| | ||| |||| |||||||||||    
T  10293324 tggcaaaaatgaccccctatgttttgggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgactccttatctttccaaaaagttgc 10293226  T
Q  234 gattat 239  Q
    ||||||    
T  10293225 gattat 10293220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 38408696 - 38408799
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||||| || |||||||||||||| || ||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  38408696 tggcaaaagtgaccccctatgtttagagaaatatgctcttttga-ccactaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgc 38408793  T
Q  234 gattat 239  Q
     |||||    
T  38408794 tattat 38408799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 16307696 - 16307597
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccc-taacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||| |||||||||||||| |||| |||||||||| ||||||| |  |||||| | ||| |||||||||||||||| |||||  |||||||||    
T  16307696 atgtttagggaaatatgctcttttgacccccctaacataaggaaaatatgttt-tttgactccttatctttacaaaaagttgcaattatgaccccttttt 16307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 8645864 - 8645930
Alignment:
Q  135 tggcaaaaatgatcccca-tgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||| ||| ||||| |||||||||| |||||||||||||| | ||||||||||||||||||||    
T  8645864 tggcaaaattgacccccaatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg 8645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 462765 - 462937
Alignment:
Q  66 aaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtcccacattnnnnnnnntggcaaaaatgatccccatgtttagggatat 165  Q
    ||||||||||| |||||| |||||| | ||| ||| || |||||||||||||| ||   ||        |||||||| | | || |||||||||||| ||    
T  462765 aaggcttaaacacactattcatcccttgagtttgctaacgtagcgattttggttcccttttaaaaaatatggcaaaagtaaccctcatgtttagggaaat 462864  T
Q  166 atgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||  |||||| ||  ||| ||||| |||||||| || |||||||| ||| ||||||||||||||||||||||    
T  462865 atgcctttttga-cctataatataagagaaatatgttcttttgaccccttatctttacaaaaagttgcgattat 462937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 7187189 - 7187360
Alignment:
Q  66 aaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtcccacattnnnnnnnntggcaaaaatgatccccatgtttagggatat 165  Q
    |||||||||||||| ||| || ||| ||||| |||||||||||||||||||   ||   ||        |||||||| ||| ||||||||||||||| ||    
T  7187189 aaggcttaaacgcattattcaccccttaagtttgcaaaagtagcgattttgactccctttttaaaaaattggcaaaattga-ccccatgtttagggaaat 7187287  T
Q  166 atgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||  |||||||| || ||||||||||||||||||| |  | |||||  |||  |||||||||||||||||||||    
T  7187288 atattcttttgaccctctaacataagggaaatatg-ttttatgaccaattatttttacaaaaagttgcgattat 7187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 8674038 - 8673977
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||||| |||||||| ||| ||||||||||||||| ||||||| ||| ||||||    
T  8674038 agggaaatatgctcttttgaccccttatctttacaaaaagttgtgattataacccatttttt 8673977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 35302151 - 35302086
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||| ||| |||||| |||||||| |||||||||||||| |||||||||||| | |||||||    
T  35302151 tggcaaaagtgacccccatatttagggaaatatgctcttttgaccccctaacataatgtaaatatg 35302086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 7835795 - 7835892
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| ||| |||||||||| ||||||| |  |||||||| ||| ||||||||| || || |||||| |||| ||||||    
T  7835795 atgtttagggaaatatgctcttttga-cccataacataaggaaaatatg-ttttttgaccccttatctttacaaagaggtgggattatggcccttttttt 7835892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 8674129 - 8674078
Alignment:
Q  65 aaaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttg 116  Q
    ||||||||||||||||||| || ||||||||| |||||||||| ||||||||    
T  8674129 aaaggcttaaacgcactattcaccccctaagtttgcaaaagtaacgattttg 8674078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 20653904 - 20653952
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  20653904 catgtttagggaaatatgctcttttga-cccctaacataagtgaaatatg 20653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 23040263 - 23040210
Alignment:
Q  148 ccccatgtttagggatatatgctcttttga-tcccctaacataagggaaatatg 200  Q
    |||||| |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  23040263 ccccatatttagggaaatatgctcttttgacccccctaacataagggaaatatg 23040210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36954551 - 36954510
Alignment:
Q  192 ggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| ||| |||||||| ||||||||||||||||    
T  36954551 ggaaatatgctcattttaccctttatctttacaaaaagttgc 36954510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 24025177 - 24025217
Alignment:
Q  193 gaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||| |||| |||||||||||| ||||||||||||||||    
T  24025177 gaaataagctcttttgaccctttatctttacaaaaagttgc 24025217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 32466070 - 32466015
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataag 191  Q
    ||||||||||||| | |||||||||| | |||||||||||||| ||||||| |||||    
T  32466070 tggcaaaaatgattctcatgtttaggaaaatatgctcttttga-cccctaatataag 32466015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 4519104 - 4518988
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  4519104 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgatctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 4519006  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  4519005 gattatggcccctttttt 4518988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 17648310 - 17648426
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  17648310 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 17648408  T
Q  234 gattatagcccctttttt 251  Q
    |||||| ||||| |||||    
T  17648409 gattatggcccccttttt 17648426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 19391624 - 19391508
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  19391624 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 19391526  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  19391525 gattatggcccctttttt 19391508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 38630135 - 38630238
Alignment:
Q  147 tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccct 246  Q
    |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||||||  |||||    
T  38630135 tccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgattatgacccct 38630233  T
Q  247 ttttt 251  Q
    |||||    
T  38630234 ttttt 38630238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 12723498 - 12723382
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| |||| |||||||| || |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  12723498 tggcaaaaatgaccccctatgtttagagaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgacccgttatctttacaaaaagttgc 12723400  T
Q  234 gattatagcccctttttt 251  Q
    |||||| | |||||||||    
T  12723399 gattatggtccctttttt 12723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 4807819 - 4807721
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||| ||| ||||| |||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  4807819 atgtttaaggaaatatgttcttttgacctcctaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcgattatggcccctttttt 4807721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 8802618 - 8802521
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||| |||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  8802618 atgtttagggaaatatgctcttttgacctcctaacataagggaaata-gctt-tttgaccccttatctttacaaaaagttgcgattatggcccctttttt 8802521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 30784483 - 30784386
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||||||||||| |||| |||||    
T  30784483 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattatggccctttttt 30784386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 19924332 - 19924448
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||| ||||| ||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  19924332 tggcaaaagtgaccccctatgtttagggaaatatactcttctgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 19924430  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  19924431 gattatgacccctttttt 19924448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 32400559 - 32400443
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||||| || |||||| ||||||| ||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||    
T  32400559 tggcaaaagtgaccccctatgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgc-cttttgaccatttatctttacaaaaagttgc 32400461  T
Q  234 gattatagcccctttttt 251  Q
     |||||  ||||||||||    
T  32400460 aattatgacccctttttt 32400443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 22452389 - 22452294
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||  ||| |||||||||||||||||| |||||||| ||||||    
T  22452389 tttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgaatatagcccttttttt 22452294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 44147039 - 44147153
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| ||||||| |||||| | ||||||||||||||||||||||  |||||||| ||| |||||| ||||||||||    
T  44147039 tggcaaaagtgacccctatgtttagggaaatatgctattttgacctcctaacataagggaaatatgct-ttttgaccccttatctttac-aaaagttgcg 44147136  T
Q  235 attatagcccctttttt 251  Q
    |||||  ||||||||||    
T  44147137 attatgacccctttttt 44147153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 5192490 - 5192392
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | | |||||||||||||||||| |  |||||||  ||| |||||||||||||||||||||| |||||||||||    
T  5192490 atgtttagggaaatatgctcttttgacctcttaacataagggaaatatg-ttttttgacctcttatctttacaaaaagttgcgattatggcccctttttt 5192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 21666497 - 21666395
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||| |  |||||||| ||| ||||| | |||||||| ||||| |||||||    
T  21666497 ccccatgtttagggaaatatgctctcttgaccccctaacataagggaaatatg-ttttttgaccccttatctttagataaagttgcaattatggcccctt 21666399  T
Q  248 tttt 251  Q
    ||||    
T  21666398 tttt 21666395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 33895443 - 33895557
Alignment:
Q  137 gcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    |||||| |||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  ||| |||| ||| |||||||||||||||| |    
T  33895443 gcaaaagtgatcccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttaaccccttatctttacaaaaagttgcaa 33895541  T
Q  236 ttatagcccctttttt 251  Q
    |||| |||| ||||||    
T  33895542 ttatggcccttttttt 33895557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 18881726 - 18881636
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||| ||||||| |||||| |  ||||||||||||||||| |||| |||||||| ||| |||||||||||||||| |||||    
T  18881726 cccatgtttagggaaatatgctattttgagcttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagttgcaattat 18881636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 7117350 - 7117235
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| |||||||||||| || |||||||||||||| || |||||| ||||| ||| || || ||| |||| ||| ||||||||||||||||     
T  7117350 tggcaaaagtga-ccccatgtttagagaaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgca 7117252  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||| ||||||    
T  7117251 attatggcccttttttt 7117235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 21930039 - 21929972
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgct 202  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  21930039 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct 21929972  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 31268359 - 31268462
Alignment:
Q  147 tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat-agcccc 245  Q
    ||||| |||||||||| |||||||||||||  ||| ||||||||||| ||||||||| || ||||||||| ||||| ||||||||| |||||| | ||||    
T  31268359 tccccgtgtttagggaaatatgctcttttg-ccccataacataaggg-aatatgctctttagaccctttatctttataaaaagttgtgattatgatcccc 31268456  T
Q  246 tttttt 251  Q
    ||||||    
T  31268457 tttttt 31268462  T

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Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 3208065 - 3208151
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||| |  |||||||| ||| |||   ||||||||||||||||    
T  3208065 atgtttagggaaatatgttcttttga-cccctaacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgattat 3208151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 1824674 - 1824737
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  1824674 tggcaaaagtga-ccccatgtttagggaaatatgctcttttga-cccctaacataaggaaaatatg 1824737  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 1859119 - 1859182
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  1859119 tggcaaaagtga-ccccatgtttagggaaatatgctcttttga-cccctaacataaggaaaatatg 1859182  T

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Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 4423254 - 4423162
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccc-taacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| ||| ||||| |||||| | | || |||||||||||||||||| || |||||||| ||| |||| |||||| ||||||||||    
T  4423254 ccccatgtttatggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaaattgcgattat 4423162  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 18253109 - 18253019
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||||| ||||| | |||||| ||| |||||||||||||||||| |  |||||||| ||| |||  |||||||||| ||||||    
T  18253109 ccccatgtttagggaaatatgtttttttga-cccataacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgattat 18253019  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 23565214 - 23565272
Alignment:
Q  192 ggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||  |||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  23565214 ggaaatatgctt-tttgaccccttatctttacaaaaagttgcgattatggcccttttttt 23565272  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 2053264 - 2053354
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccc 245  Q
    |||| ||| |||||||||||| | || ||| | | || |||||| |||| |||||||||||| ||||| |||||||||| ||| |||||||    
T  2053264 tttatggaaatatgctcttttaaccctctatctttagagaaataagctcttttgaccctttacctttataaaaagttgcaattttagcccc 2053354  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 41688333 - 41688243
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| || ||||| |||||||| ||| |||||||||  |||| || |  |||||||| ||| |||  |||||||||||||||||    
T  41688333 cccatgtttagagaaatatgttcttttgaccccttaacataagaaaaatctgatattttgaccccttatcttctcaaaaagttgcgattat 41688243  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 3380279 - 3380363
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    ||||||||||||| | |||||||||||||  || ||| ||||||||||||||| |  |||||||  ||| || |||||||||||||    
T  3380279 ccccatgtttaggtaaatatgctcttttgtccctctagcataagggaaatatg-ttttttgacctcttatctctacaaaaagttgc 3380363  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 22255572 - 22255628
Alignment:
Q  66 aaggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtccca 122  Q
    |||||||||||||||| | |  ||||||||| ||||||||| || ||||||||||||    
T  22255572 aaggcttaaacgcacttttcgccccctaagtttgcaaaagttgcaattttggtccca 22255628  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 26628262 - 26628146
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  26628262 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 26628164  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  26628163 gattatggcccctttttt 26628146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 30155382 - 30155266
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  30155382 tggcaaaagtgatcccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 30155284  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  30155283 gattatggcccctttttt 30155266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 3780948 - 3781061
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  3780948 tggcaaaagtga-ccccatgtttagggaaatatgctcttttga-cccctaacataagggaaatatgctt-tttgaccctttatctttacaaaaagttgcg 3781044  T
Q  235 attatagcccctttttt 251  Q
    | |||  ||||||||||    
T  3781045 aatatgacccctttttt 3781061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 27852988 - 27852873
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  27852988 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 27852890  T
Q  234 gattatagccccttttt 250  Q
    |||||| ||||||||||    
T  27852889 gattatggccccttttt 27852873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 28173966 - 28173852
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    ||||||||||||||| | ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  28173966 tggcaaaaatgatcctctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 28173868  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  28173867 gattatgacccctttt 28173852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 3329030 - 3328934
Alignment:
Q  154 gtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  3329030 gtttagggaaatatgctcttttgacctcctaacataagggaaatatgc-cttttgaccccttatctttacaaaaagttgcgattatggcccctttttt 3328934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 8542677 - 8542793
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  8542677 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 8542775  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  8542776 aattatggcccctttttt 8542793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 48907529 - 48907413
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||| ||||||||||    
T  48907529 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttaaaaaaagttgc 48907431  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  48907430 gattatggcccctttttt 48907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 26633593 - 26633480
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||| |||||||| |  |||||||| ||| |||||||||||||||||    
T  26633593 tggcaaaaatga-ccccatctttagggaaatatgctcttttga-cccctaacataagagaaatatgttt-tttgaccccttatctttacaaaaagttgcg 26633497  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||||||||||    
T  26633496 attatggcccctttttt 26633480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 4522039 - 4522137
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | | ||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  4522039 atgtttagggaaatatgctcttttgacctcttaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgattattgcccctttttt 4522137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 23428856 - 23428742
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  23428856 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 23428758  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  23428757 gattatgacccctttt 23428742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 13080961 - 13081077
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| || |||||||| |||||||||||||| | | ||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  13080961 tggcaaaagtgaccccctatatttagggaaatatgctcttttgacctcataacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgc 13081059  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  13081060 gattatggcccctttttt 13081077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 22416418 - 22416505
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||||||||||||||| |  ||||||||||| |||||||||| |||||||| ||| |||||||||||||||| |||||    
T  22416418 atgtttagggatatatgctcttttgaccttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagttgcaattat 22416505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 28155101 - 28155003
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||  ||| |||||||||||||||||||||| |||| ||||||    
T  28155101 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcgattatggcccttttttt 28155003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 46673284 - 46673170
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttac-aaaaagttg 232  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||| |  |||||||| ||| |||||| |||||||||    
T  46673284 tggcaaaagtgatcccctatgtttagggaaatatgctcttttgactccctaacataagggaaatatgtt--tttgaccccttatctttacaaaaaagttg 46673187  T
Q  233 cgattatagcccctttt 249  Q
    |||||||  ||||||||    
T  46673186 cgattatgacccctttt 46673170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 25179663 - 25179761
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||| |||| |||||||| |  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  25179663 atgtttagggaaatatgctcttttgacctcctaacgtaagagaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatggcccctttttt 25179761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 10743488 - 10743588
Alignment:
Q  147 tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccct 246  Q
    |||| ||||||||||| |||||||||||| | |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  |||||    
T  10743488 tccctatgtttagggaaatatgctcttttaa-cccctaacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatgacccct 10743585  T
Q  247 ttt 249  Q
    |||    
T  10743586 ttt 10743588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 22447963 - 22447861
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccc----tttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||  ||||||||    | || |||||||||||||||||||||| |||||||    
T  22447963 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatatatctttacaaaaagttgcgattatggcccctt 22447865  T
Q  248 tttt 251  Q
    ||||    
T  22447864 tttt 22447861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 4775918 - 4776027
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||| |||||||| || ||| |||   |||||||||||    
T  4775918 tggcaaaagtgacccccatgtttagggaaatatgctattttgaccccctcacatacgggaaatatgatcctttgatcccttatcttcttaaaaagttgcg 4776017  T
Q  235 attatagccc 244  Q
    ||||| ||||    
T  4776018 attatggccc 4776027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 22500832 - 22500716
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||| | |||||||||||||| | ||||||||||||||||||||||  ||||| || |||  |||||||||||||||    
T  22500832 tggcaaaagtgaccccctatgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgatcccttatatttacaaaaagttgc 22500734  T
Q  234 gattatagcccctttttt 251  Q
    |||||| | |||||||||    
T  22500733 gattatggtccctttttt 22500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 25336443 - 25336527
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||  | ||||||| ||||||||  |||||||||||||||||    
T  25336443 tttagggaattatgctcttttgaccccctaacataagggaaatatgaccttttgaccttttaacttctcaaaaagttgcgattat 25336527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 8339159 - 8339061
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| ||||||| |||||| | ||||||||||  ||||||||||  |||||||| ||| |||||||||||||||||||||| ||| |||||||    
T  8339159 atgtttagggaaatatgcttttttgacctcctaacataatagaaatatgctt-tttgaccccttatctttacaaaaagttgcgattatggcctctttttt 8339061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 25022900 - 25022786
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| ||| |||||||||||| ||||| |  ||||| || ||| ||||||||||||||||    
T  25022900 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccataacataagggatatatg-ttttttgaacccttatctttacaaaaagttgc 25022802  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  25022801 gattatgacccctttt 25022786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 251
Target Start/End: Complemental strand, 26127207 - 26127027
Alignment:
Q  68 ggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtcccacattnnnnnnnntggcaaaaatgatccccatgtttagggatatat 167  Q
    |||||||||||||||| || || |||||| |||||||||||||||||||| |||    |        | |||||| ||| ||||||||||||||| ||||    
T  26127207 ggcttaaacgcactattcaccctctaagtttgcaaaagtagcgattttggcccctttgtaaaaaaaat-gcaaaagtga-ccccatgtttagggaaatat 26127110  T
Q  168 gctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    | | |||||| || |||||||| ||||||||||||  |||| ||| ||| |||||||||||||||||||||| ||| |||||||    
T  26127109 gttattttgaccctctaacataggggaaatatgct-ttttggccccttatctttacaaaaagttgcgattatggcctctttttt 26127027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 3821004 - 3821065
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgacccctttttt 3821065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 34878746 - 34878650
Alignment:
Q  154 gtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||  ||||| || ||| |||||||||||||| | ||||| || ||||||||    
T  34878746 gtttagggaaatatgctcttttgaccccctaatataagggaaatatgct-ttttgatcccttatctttacaaaaagtttcaattatggcacctttttt 34878650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 46387809 - 46387745
Alignment:
Q  136 ggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    ||||||| ||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  46387809 ggcaaaagtgacccccatgtttaaggaaacatgctcttttgatcccctaacataagggaaatatg 46387745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 26177179 - 26177077
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    ||||||||| ||||| ||||||| |||||| || |||||||| ||||||||||||  |||| | | ||| |||||||||||||||||||||| ||| |||    
T  26177179 ccccatgttcagggaaatatgctattttgaccctctaacataggggaaatatgct-ttttggctcattatctttacaaaaagttgcgattatggcctctt 26177081  T
Q  248 tttt 251  Q
    ||||    
T  26177080 tttt 26177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 48860787 - 48860873
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| ||||||| |||||| |  ||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||    
T  48860787 atgtttagggaaatatgctattttgaccttctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattat 48860873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 33279803 - 33279729
Alignment:
Q  153 tgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaa 227  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||| || |||  |||||||||    
T  33279803 tgtttaggaaaatatgctcttttgaccccctaacataagggaaatatgctcttttgatcccttatatttacaaaa 33279729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 31039182 - 31039098
Alignment:
Q  166 atgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||| ||||||||||| |||||||||| ||   |||||||||| |||   ||||||||||||||||||||||||||||    
T  31039182 atgctcttttga-cccctaacatatgggaaatatgatctaatgaccctttatcttcttaaaaagttgcgattatagcccctttttt 31039098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 40836414 - 40836299
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgacccttta-actttacaaaaagttgc 233  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| |  |||||||| ||| |  | | ||||||||||    
T  40836414 tggcaaaagtga-ccccatgtttagggaaatatgttcttttgaccccctaatataagggaaatatg-ttttttgaccccttatatctcaaaaaaagttgc 40836317  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  40836316 gattatggcccctttttt 40836299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 20001794 - 20001842
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  20001794 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatg 20001842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 9496437 - 9496361
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaa 228  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||||||||  |||| ||| ||| |||||||||||    
T  9496437 catgtttagggaaatatgctcttttgaccctctaacataaaggaaatatgct-ttttgtccccttatctttacaaaaa 9496361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 34296596 - 34296529
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaacttta 222  Q
    |||||||| |||||||||||||| || ||||| | | |||||||||||| |||||||||||| |||||    
T  34296596 tttagggaaatatgctcttttgaccctctaactttatggaaatatgctcttttgaccctttatcttta 34296529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 32315002 - 32315051
Alignment:
Q  150 ccatgtttagggatatatgctcttttgatcccctaacataagggaaatat 199  Q
    ||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  32315002 ccatgtttagggaaatatgttcttttgaccccctaacatgagggaaatat 32315051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 49657996 - 49657940
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccc 212  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  49657996 tttagggaaatatgctcttttga-cccctaacataaggaaaatatgatcttttgaccc 49657940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 1743334 - 1743417
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgat 236  Q
    ||||||||| | |||| ||||||||| |||||||||||| |||||| || || |||||||| ||| |||  ||||||||||||||    
T  1743334 atgtttaggaaaatatactcttttgaccccctaacataa-ggaaatgtgatcttttgaccccttatcttctcaaaaagttgcgat 1743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 35201231 - 35201131
Alignment:
Q  135 tggcaaaaatgatccc-catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| ||| ||||||| |||| | ||||||||||||  ||||||||||| ||||||||| |  |||||||| ||| |||  ||||||||| |    
T  35201231 tggcaaaaatgaccccacatgttttgggaaacatgctcttttga--ccctaacataaaggaaatatgatattttgaccccttatcttctcaaaaagttac 35201134  T
Q  234 gat 236  Q
    |||    
T  35201133 gat 35201131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 6927607 - 6927653
Alignment:
Q  205 tttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  6927607 tttgaccccttatctttacaaaaagttgcgattatgacccctttttt 6927653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 18388933 - 18388871
Alignment:
Q  138 caaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    ||||| ||| ||||||||| ||||| |||||||||||||| |||||| ||||||  |||||||    
T  18388933 caaaagtgacccccatgttaagggaaatatgctcttttgaccccctaccataagataaatatg 18388871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 23320443 - 23320484
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataag 191  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  23320443 cccatgtttagggaaatatgctcttttga-cccctaacataag 23320484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 26177257 - 26177204
Alignment:
Q  68 ggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtccc 121  Q
    |||||||| ||||||| || || |||||| |||||||||||||||||||| |||    
T  26177257 ggcttaaatgcactattcaccctctaagtttgcaaaagtagcgattttggcccc 26177204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 32960823 - 32960775
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||    
T  32960823 agggaaatatgctt-tttgaccccttatctttacaaaaagttgcgattat 32960775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 36311219 - 36311283
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    |||||||| ||| |||||| |||||| | |||| ||||||||| ||| ||||||||||||||||||    
T  36311219 tggcaaaagtga-ccccatatttaggaaaatatactcttttgaccccataacataagggaaatatg 36311283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 33105022 - 33105073
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatg 200  Q
    ||||||||||||||| ||||||||||||||| | ||| |||||| ||||||||    
T  33105022 ccccatgtttagggaaatatgctcttttgat-ctctatcataagagaaatatg 33105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 24962020 - 24962136
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  24962020 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 24962118  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  24962119 gattatggcccctttttt 24962136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 19078161 - 19078046
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||||||    
T  19078161 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcg 19078063  T
Q  235 attatagcccctttttt 251  Q
    |||||  ||||||||||    
T  19078062 attatgacccctttttt 19078046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 19126051 - 19125936
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| |||||||||||||||||    
T  19126051 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcg 19125953  T
Q  235 attatagcccctttttt 251  Q
    |||||  ||||||||||    
T  19125952 attatgacccctttttt 19125936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 29676148 - 29676262
Alignment:
Q  137 gcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    |||||| |||||||| ||||||||||| |||||||||| ||||| ||||||||||| ||||||||||  |||||||| ||| ||||| ||||||||||||    
T  29676148 gcaaaagtgatcccctatgtttagggaaatatgctcttgtgatctcctaacataagtgaaatatgct-ttttgaccccttatctttataaaaagttgcga 29676246  T
Q  236 ttatagcccctttttt 251  Q
    |||| |||||||||||    
T  29676247 ttatggcccctttttt 29676262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 46432453 - 46432339
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  46432453 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 46432355  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  46432354 gattatgacccctttt 46432339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 24749865 - 24749981
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | | ||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  24749865 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcataacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 24749963  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||| ||||||    
T  24749964 gattatggcccatttttt 24749981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 48472100 - 48471984
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||| ||||||||||  |||||||| ||| ||||||||||||||||    
T  48472100 tggcaaaattgaccccctatgtttagggaaatatgctcttttgacctcctaacataagagaaatatgct-ttttgaccccttatctttacaaaaagttgc 48472002  T
Q  234 gattatagcccctttttt 251  Q
    |||||| | |||||||||    
T  48472001 gattatggtccctttttt 48471984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 24196346 - 24196444
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| || |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||| ||| |||||||||||    
T  24196346 atgtttagagaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgaatatggcccctttttt 24196444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 249
Target Start/End: Complemental strand, 51719340 - 51719245
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| |  ||| |||| ||| ||||||||||||||||||||||  ||||||||    
T  51719340 atgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgtt--ttttaccccttatctttacaaaaagttgcgattatgacccctttt 51719245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 3616884 - 3616982
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | | | |||||||||||||||| |  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  3616884 atgtttagggaaatatgctcttttgacctcttcacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgcgattatggcccctttttt 3616982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 43706890 - 43706777
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| ||| |||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  43706890 tggcaaaagtgaccccctatgtttagggaaatatgctcttttga-cccataacataagggaaatatgttt-tttgaccccttatctttacaaaaagttgc 43706793  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  43706792 gattatgacccctttt 43706777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 2425292 - 2425395
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| || ||||||||||||||||||| |  ||| | || ||| |||||||||||||||||    
T  2425292 tggcaaaagtgacccctatgtttaggga-atatgctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcg 2425390  T
Q  235 attat 239  Q
    |||||    
T  2425391 attat 2425395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 47685182 - 47685269
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgat 236  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||| |  |||||||| ||| |||||||||||||||||||    
T  47685182 ccccatgtttaaggaaatatgctattttgatcccctaacataaggaaaatatg-ttttttgaccccttacctttacaaaaagttgcgat 47685269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 4059741 - 4059655
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||| |||||||||||||| | |||||||||||| ||||||| |  |||||||| ||| ||||||||||||||||||||||    
T  4059741 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatg-ttttttgaccccttatctttacaaaaagttgcgattat 4059655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 29182219 - 29182121
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||| || |||||||||||||| |||||||||||||||||||||| || |||||||| ||| |||  || |||||||||||||| |||| ||||||    
T  29182219 atgtttagagaaatatgctcttttga-cccctaacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgattatggcccatttttt 29182121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 16551881 - 16551771
Alignment:
Q  135 tggcaaaaatgatcccca-tgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| ||||| |||||||||| |||||||||||||| |||||||||| ||  ||||||| || |||||||| ||| |||  |||||||||||    
T  16551881 tggcaaaagtgacccccaatgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgc 16551782  T
Q  234 gattatagccc 244  Q
    |||||| ||||    
T  16551781 gattatggccc 16551771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 27093070 - 27092973
Alignment:
Q  153 tgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||| |||||||||||||| ||||||| ||| | |||||||| |  |||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttt-tttgaccccttatctttacaaaaagttgcaattatggcccctttttt 27092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 9387760 - 9387865
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccc-taacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| | | ||||||||||| ||| |||||||||||||| |||| |||||||||||||||||  || |||||||||||| |||  |||||| ||||    
T  9387760 tggcaaaagtaacccccatgtttaaggaaatatgctcttttgacccccctaacataagggaaatataatcttttgaccctttatcttctcaaaaatttgc 9387859  T
Q  234 gattat 239  Q
    ||||||    
T  9387860 gattat 9387865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 16971933 - 16972022
Alignment:
Q  150 ccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||  | |||||| ||||| |||  |||||  ||||||||||    
T  16971933 ccatgtttagggatatatgctctttagaccccctaacataagggaaatatgaccttttgactctttatcttctcaaaatattgcgattat 16972022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 21148063 - 21148123
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccc 212  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  21148063 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccc 21148123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 4455277 - 4455175
Alignment:
Q  138 caaaaatgatcccca-tgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgat 236  Q
    ||||| ||||||||| |||||||| | |||||||||||||| ||| |||||||||||||||||| |  |||||||  ||| |||  ||||||||||||||    
T  4455277 caaaagtgatccccaatgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgat 4455178  T
Q  237 tat 239  Q
    |||    
T  4455177 tat 4455175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 2657749 - 2657645
Alignment:
Q  135 tggcaaaaatga-tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||||| |||| | |||||||||| |||||||||||| |||||||| ||| ||||  |||||||||     
T  2657749 tggcaaaagtgactccctatgtttagggaaatatgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgt 2657651  T
Q  234 gattat 239  Q
    ||||||    
T  2657650 gattat 2657645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 18606904 - 18606816
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||||| | || |||||||| ||| |||  |||||||||| ||||||    
T  18606904 catgtttagggaaatatgctcttttgaccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagttgtgattat 18606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 22786111 - 22786194
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttg 232  Q
    ||||||||||||||| |||||||||||||| |  |||||||||| |||||||| || |||||||| ||| |||  ||||||||||    
T  22786111 ccccatgtttagggaaatatgctcttttga-catctaacataagtgaaatatgatcttttgaccccttatcttctcaaaaagttg 22786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 2260602 - 2260499
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctt 247  Q
    |||||||||||| || ||||||| |||||| ||| ||| |||||||||||||| |  ||| |||| ||| |||  ||||||||||||||| |  ||||||    
T  2260602 ccccatgtttagtgaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgattctgacccctt 2260503  T
Q  248 tttt 251  Q
    ||||    
T  2260502 tttt 2260499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 28920888 - 28920778
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||      ||||||||  |||||||| ||| ||||||||||||| ||    
T  28920888 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacat------aatatgct-ttttgaccccttatctttacaaaaagtggc 28920796  T
Q  234 gattatagcccctttttt 251  Q
    |||||| ||||| |||||    
T  28920795 gattatggcccccttttt 28920778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 10684860 - 10684965
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccc-taacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||  |||||||||| |||| |||| |||| |||| |||||||||  ||||||| || |||||||| ||| |||  |||||||||||    
T  10684860 tggcaaaagtgaccccattgtttagggaaatatactctattgacccccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagttgc 10684959  T
Q  234 gattat 239  Q
    ||||||    
T  10684960 gattat 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 21185286 - 21185375
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||| | ||||||| || ||||||||  || |||  |||||||||||||||||    
T  21185286 ccccatgtttagggaaatatgttcttttga-cccttaacataa-gaaaatatgatcttttgaccccctatcttctcaaaaagttgcgattat 21185375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 31084811 - 31084745
Alignment:
Q  172 ttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||| ||||||||||| || |||||||||  |||||||| ||| |||||||||||||| |||||||    
T  31084811 ttttgaccccctaacatatggaaaatatgctt-tttgaccccttatctttacaaaaagtttcgattat 31084745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 28552525 - 28552456
Alignment:
Q  164 atatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||||||| | || ||| | | ||||||||| |||| |||||||||| | ||||||||||||||||    
T  28552525 atatgctcttttaaccctctatctttagggaaataagctcttttgacccttaatctttacaaaaagttgc 28552456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 16858458 - 16858514
Alignment:
Q  196 atatgctcctttgaccctttaactttacaaaa-agttgcgattatagcccctttttt 251  Q
    |||||||| |||| ||| ||| |||||||||| |||||||||||| |||||||||||    
T  16858458 atatgctcttttggccccttatctttacaaaaaagttgcgattatggcccctttttt 16858514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 2986771 - 2986869
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  2986771 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgcgattatggcccctttttt 2986869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 11175974 - 11176090
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||     
T  11175974 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgt 11176072  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  11176073 gattatggcccctttttt 11176090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 38716278 - 38716376
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | ||||||||||| ||||||||||  |||||||| ||| |||||||||||||||||||||| |||||||||||    
T  38716278 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgct-ttttgaccccttatctttacaaaaagttgcgattatggcccctttttt 38716376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 30714511 - 30714395
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||| |||| |||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||     
T  30714511 tggcaaaagtgaccccctatgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacccgttatctttacaaaaagttgt 30714413  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  30714412 gattatggcccctttttt 30714395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 9051264 - 9051149
Alignment:
Q  135 tggcaaaaatga-tccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||  ||| ||||||||||||||||    
T  9051264 tggcaaaagtgactccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgc 9051166  T
Q  234 gattatagccccttttt 250  Q
    |||||| |||| |||||    
T  9051165 gattatggccctttttt 9051149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 4587928 - 4588042
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |  ||| |||| ||| ||||||||||||||||    
T  4587928 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttaaccccttatctttacaaaaagttgc 4588026  T
Q  234 gattatagcccctttt 249  Q
    ||||||  ||||||||    
T  4588027 gattatgacccctttt 4588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 9787644 - 9787742
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||  |||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  9787644 atgtttagggaaatatgctcttttgacctgctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttacgattatggcccctttttt 9787742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 239
Target Start/End: Original strand, 331711 - 331884
Alignment:
Q  67 aggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttggtcccacattnnnnnnnntggcaaaaatgatcc-ccatgtttagggatat 165  Q
    |||||||| |||||||| |||||||||||| |||||||||||||| ||||| | |   ||        |||||||| ||| |  ||||||||||||| ||    
T  331711 aggcttaagcgcactattcatcccctaagtttgcaaaagtagcgactttggcctccttttaaaaaaaatggcaaaagtgaccttccatgtttagggaaat 331810  T
Q  166 atgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||| || ||||| |||||||||||||||  ||||| || ||| |||| |||||||||||||||||    
T  331811 atgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcgattat 331884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 6763954 - 6763838
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | |||||||||||| |||||||||  |||||||| ||| ||||||||||||| ||    
T  6763954 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgct-ttttgaccccttatctttacaaaaagtagc 6763856  T
Q  234 gattatagcccctttttt 251  Q
    |||||  |||||||||||    
T  6763855 gattacggcccctttttt 6763838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 15700832 - 15700928
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  15700832 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattatgacccctttt 15700928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 15735131 - 15735247
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| |||||| |||| |||||||||||||| | | |||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  15735131 tggcaaaagtgaccccctatgttttgggaaatatgctcttttgacctcgtaacataagggaaatatg-tattttgaccccttatctttacaaaaagttgc 15735229  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  15735230 gattatggcccctttttt 15735247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 2190614 - 2190704
Alignment:
Q  149 cccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||||||| |||||||||||||| || ||||| ||||| |||||||||| |||| ||| ||| ||||||||||||||||| ||||    
T  2190614 cccatgtttagggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagttgcggttat 2190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 17368314 - 17368399
Alignment:
Q  165 tatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||||| | ||||||||||||||||||||||  |||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctt-tttgaccccttatctttacaaaaagttgcaattatggcccctttttt 17368399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 18538065 - 18537949
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||| |||||| | | |||||| |||||||||||||  |||||||| ||| ||||||||||||||||    
T  18538065 tggcaaaagtgaccccctatgtttagggaaatatgcttttttgacctcataacattagggaaatatgctt-tttgaccccttatctttacaaaaagttgc 18537967  T
Q  234 gattatagcccctttttt 251  Q
     ||||| |||||||||||    
T  18537966 aattatggcccctttttt 18537949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 22191113 - 22191217
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||||||||||   ||||||||||||||||||||| | |||||||| ||| |||||||||||||| |    
T  22191113 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacttcctaacataagggaaatatgc-cttttgaccccttatctttacaaaaagttac 22191211  T
Q  234 gattat 239  Q
    ||||||    
T  22191212 gattat 22191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 25299038 - 25298922
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | | |||||||| ||||||||| |  ||||| || ||| ||||||||||||||||    
T  25299038 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcttaacataaaggaaatatgttt-tttgatcccttatctttacaaaaagttgc 25298940  T
Q  234 gattatagcccctttttt 251  Q
    |||||| |||||||||||    
T  25298939 gattatggcccctttttt 25298922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 36464341 - 36464455
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||  || |||||| | ||| |||  ||||||||||||    
T  36464341 tggcaaaagtga-ccccatgtttagggaaatatgatcttttgaccccctaacataagggaaatataatcttttgactccttatcttctcaaaaagttgcg 36464439  T
Q  235 attatagcccctttttt 251  Q
    | ||| |||||||||||    
T  36464440 a-tatggcccctttttt 36464455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 25884413 - 25884298
Alignment:
Q  136 ggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    ||||||| ||| |||||||||||| || ||||| | |||| |||||||||||||||||||||||| |  ||| |||| ||| |||  |||||||||||||    
T  25884413 ggcaaaagtgacccccatgtttagagaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagttgcga 25884314  T
Q  236 ttatagcccctttttt 251  Q
    |||| |||||| ||||    
T  25884313 ttattgcccctgtttt 25884298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 15147835 - 15147896
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    |||||||||||||| ||||| || ||| ||| ||||||||||||||||||||||||||||||    
T  15147835 agggaaatatgctcttttgatccattatcttaacaaaaagttgcgattatagcccctttttt 15147896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 4105045 - 4104946
Alignment:
Q  150 ccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    |||| |||||||| ||||  |||||||| || |||||||||||| ||||||||| |||||| | |||  |||||||||||||||||||||  ||||||||    
T  4105045 ccatatttagggaaatatattcttttga-cctctaacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgacccctttt 4104947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 26829309 - 26829210
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||| ||| ||||||||||| || |||||||||||||||||||||| || |||||||| ||| | |  |||||||||| |||||| ||||| ||||    
T  26829309 catgtttaaggaaatatgctctttgga-cccctaacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatggccccctttt 26829211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 2123471 - 2123540
Alignment:
Q  164 atatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    ||||||||||||||||| ||| | | ||||||||| | || |||||||||||| ||||||||||||||||    
T  2123471 atatgctcttttgatcctctatctttagggaaataagttcttttgaccctttatctttacaaaaagttgc 2123540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 28365581 - 28365681
Alignment:
Q  138 caaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatt 237  Q
    ||||| ||| ||| || |||||||| |||||||| ||||| |||||||||| ||||||||||| || ||| |||| ||| |||  |||||||||||||||    
T  28365581 caaaagtgacccctatatttagggaaatatgctcgtttga-cccctaacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgatt 28365679  T
Q  238 at 239  Q
    ||    
T  28365680 at 28365681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 14743401 - 14743501
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||| |||| ||||| |||||||| ||  |||| |||| ||||||||||| |||| ||| |||  ||| |||||| ||||||||||||||||| |||    
T  14743401 catgttttgggaaatatgatcttttgaccctataacttaagagaaatatgctcttttggccccttatttttgcaaaaatttgcgattatagcccctattt 14743500  T
Q  251 t 251  Q
    |    
T  14743501 t 14743501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 22387288 - 22387189
Alignment:
Q  151 catgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    ||||||||| || |||||||||||||| ||||||||||| | |||||||| |  |||||||| ||| || |||||| ||||| |||||| ||||| ||||    
T  22387288 catgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatg-ttttttgaccccttatctatacaaagagttgtgattatggccccctttt 22387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 15147813 - 15147857
Alignment:
Q  136 ggcaaaaatgatccccatgtttagggatatatgctcttttgatcc 180  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||    
T  15147813 ggcaaaagtgacccccatgtttagggaaatatgctcttttgatcc 15147857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 33199549 - 33199613
Alignment:
Q  164 atatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaa 228  Q
    |||||||||||||| |  ||||| | |||||||||||||| |||| || |||| |||||||||||    
T  33199549 atatgctcttttgaccttctaactttagggaaatatgctcttttggccttttatctttacaaaaa 33199613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 142183 - 142068
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||  |||||||  ||| |||||||||||||||||    
T  142183 tggcaaaagtgacccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgct-ttttgacctcttatctttacaaaaagttgcg 142085  T
Q  235 attatagcccctttttt 251  Q
    ||||| |||| ||||||    
T  142084 attatggcccatttttt 142068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 2011 - 1907
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  2011 tggcaaaagtgaccccctatgtttagggaaatatgctattttgaccccctaacataagggaaatatgct-ttttgaccccttatctttacaaaaagttgc 1913  T
Q  234 gattat 239  Q
    ||||||    
T  1912 gattat 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 2286 - 2170
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | ||||||||||||| ||||||||  |||||||| ||| ||||||||||||||||    
T  2286 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggcaatatgct-ttttgaccccttatctttacaaaaagttgc 2188  T
Q  234 gattatagcccctttttt 251  Q
    ||||||  ||||||||||    
T  2187 gattatgacccctttttt 2170  T

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Target: scaffold1875 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 993 - 889
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| ||| ||| ||||||||||||||||||| |||||| |  ||||||||||| |||||||||| |||||||| ||| ||||||||||||||||     
T  993 tggcaaaagtgaccccaatgtttagggatatatgctattttgaccttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagttgca 894  T
Q  235 attat 239  Q
    |||||    
T  893 attat 889  T

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Target: scaffold0179 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 5886 - 5771
Alignment:
Q  135 tggcaaaaatgatcccc-atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgc 233  Q
    |||||||| ||| |||| ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||| ||| ||||||||||||||||    
T  5886 tggcaaaagtgaccccctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgc 5788  T
Q  234 gattatagccccttttt 250  Q
    |||||| |||| |||||    
T  5787 gattatggccctttttt 5771  T

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Target: scaffold0406 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 2080 - 2174
Alignment:
Q  156 ttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||| |||||||||||||| | |||||||||||||||| |||||  ||||||||  || ||||||||||||||||||||||||||||||||||    
T  2080 ttagggaaatatgctcttttgacctcctaacataagggaaacatgctt-tttgaccccatatctttacaaaaagttgcgattatagcccctttttt 2174  T

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Target: scaffold0087 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 25183 - 25085
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||  |||||||| |||||| |||||||||||    
T  25183 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgct-ttttgaccccttatctttaacaaaagttgtgattatggcccctttttt 25085  T

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Target: scaffold0062 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 49744 - 49840
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  49744 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattatgacccctttt 49840  T

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Target: scaffold0062; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 62283 - 62379
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttt 249  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||||| |  |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  62283 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgaccccttatctttacaaaaagttgcgattatgacccctttt 62379  T

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Target: scaffold0060 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 66246 - 66357
Alignment:
Q  139 aaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatta 238  Q
    |||||||  ||| ||||||||||| ||||||| |||||| | ||||||||||||||| ||||||  |||||||| ||| |||||||||||||||||||||    
T  66246 aaaaatggcccctatgtttagggaaatatgctattttgacctcctaacataagggaactatgct-ttttgaccccttatctttacaaaaagttgcgatta 66344  T
Q  239 tagcccctttttt 251  Q
    |  ||||||||||    
T  66345 tgacccctttttt 66357  T

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Target: scaffold0419 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 3179 - 3081
Alignment:
Q  152 atgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |  |||||||  ||| |||||||||||||||| ||||| ||| |||||||    
T  3179 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatg-ttttttgacctcttatctttacaaaaagttgcaattatggcctctttttt 3081  T

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Target: scaffold0291 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 9992 - 10104
Alignment:
Q  138 caaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgatt 237  Q
    ||||| ||| || |||||||||||| |||||||||||||| ||| |||||||||| ||||||| || || ||||| ||| |||  |||||||||||||||    
T  9992 caaaagtgaccctcatgtttagggaaatatgctcttttga-cccataacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgatt 10090  T
Q  238 atagcccctttttt 251  Q
    ||  ||||||||||    
T  10091 atttcccctttttt 10104  T

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Target: scaffold0150 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 5907 - 6003
Alignment:
Q  144 tgatcccc-atgtttagggatatatgctcttttgatcccc-taacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||| ||||||||||| ||||||| |||||| |||| ||||||||||||||||||||  |||||||| ||| ||||| ||||||||||||||||    
T  5907 tgatcccctatgtttagggaaatatgctattttgacccccctaacataagggaaatatgct-ttttgaccccttatctttataaaaagttgcgattat 6003  T

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Target: scaffold0174 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 29797 - 29887
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||||| |||| ||||||||||| || |||||||||||||||||||||| || |||||||| ||| |||  ||||||||||| |||||    
T  29797 ccccatgtttggggaaatatgctctttgga-cccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattat 29887  T

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Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 455107 - 455198
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    ||||||||||||| | ||||| |||||| | |||||||||||||||||||||| || |||||||| ||| |||  | |||||||||||||||    
T  455107 ccccatgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattat 455198  T

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Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 455011 - 455075
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccc 212  Q
    ||||||||||||||| |||||||||||| | |||||||||||| ||||||| | || ||||||||    
T  455011 ccccatgtttagggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccc 455075  T

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Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 3164 - 3061
Alignment:
Q  135 tggcaaaaatgatccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcg 234  Q
    |||||||| | |||| ||| |||||| | ||||| | ||||| ||||||||||||||| |||||||||  |||||||| |||  ||||||||||||||||    
T  3164 tggcaaaagttatccacatatttaggaaaatatgtttttttg-tcccctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcg 3066  T
Q  235 attat 239  Q
    |||||    
T  3065 attat 3061  T

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Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 54492 - 54552
Alignment:
Q  190 agggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagccccttttt 250  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||||||||| ||||||||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatggccccttttt 54552  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 81066 - 81017
Alignment:
Q  67 aggcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttg 116  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  81066 aggcttaaacgcactattcaccccctaagtttgcaaaagtagcgattttg 81017  T

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Target: scaffold0050; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 79834 - 79882
Alignment:
Q  69 gcttaaacgcactatccatcccctaagtctgcaaaagtagcgattttgg 117  Q
    |||||||||||||||  | ||| ||||| ||||||||||||||||||||    
T  79834 gcttaaacgcactatttaccccttaagtttgcaaaagtagcgattttgg 79882  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 44047 - 43961
Alignment:
Q  148 ccccatgtttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcga 235  Q
    ||||||||||||| | ||||||| |||||| ||||||||  |||||||||||| || ||||||| |||| |||  |||||||||||||    
T  44047 ccccatgtttaggaaaatatgcttttttga-cccctaacgaaagggaaatatgatcttttgaccttttatcttctcaaaaagttgcga 43961  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 250703 - 250639
Alignment:
Q  186 cataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattatagcccctttttt 251  Q
    ||||||||||||||| |  |||||||| ||| ||||||||||||||| |||||| |||||||||||    
T  250703 cataagggaaatatgttt-tttgaccccttatctttacaaaaagttgtgattatggcccctttttt 250639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 112214 - 112298
Alignment:
Q  155 tttagggatatatgctcttttgatcccctaacataagggaaatatgctcctttgaccctttaactttacaaaaagttgcgattat 239  Q
    |||||||| ||||||  |||||| | |||||||||||||||||||| || |||||| | ||| |||  |||||||||||| ||||    
T  112214 tttagggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagttgcggttat 112298  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 4694 - 4637
Alignment:
Q  194 aaatatgctcctttgaccctttaactttaca-aaaagttgcgattatagccccttttt 250  Q
    |||||||||| |||||||| ||| ||||||| ||||||||||||| | ||||||||||    
T  4694 aaatatgctcttttgaccccttatctttacaaaaaagttgcgattttggccccttttt 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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