View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0929_low_8 (Length: 447)
Name: NF0929_low_8
Description: NF0929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0929_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 30 - 438
Target Start/End: Complemental strand, 47024034 - 47023624
Alignment:
| Q |
30 |
caaatggctagcagtcgcgcgcggaacattcaaccattgaatccatcacatgtgcagccaagtcccactggtttagcaggccggcaaactgcaattctgc |
129 |
Q |
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| T |
47024034 |
caaatggctagcagccgcgcgcggaatattcaaccattgaatccatcacatgtgcagccaagtcccactggtttagcaagccggcaaactgcaattctgc |
47023935 |
T |
|
| Q |
130 |
ctacaaattctgaaccgcatcagcacatgcattttgcagctagtcccaatgtctattttgaaatatccgattgtatcaaaactcttcttactaatgatat |
229 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
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| T |
47023934 |
ctacaaattctgaatcgcatcagcacatgcattttgcagctagttccaatgtctattttaaaatatccgattgtatcgaaactcttcttactaatgatat |
47023835 |
T |
|
| Q |
230 |
gctataagaactttcctt--tnnnnnnnnnnnngtgccctgtttcattatttcagtgctcaaggcactttattttctctcaagggactacttgacagaaa |
327 |
Q |
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|||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47023834 |
gctataagaactttccttaaaaaaaaaaaaaaagtgcccagtttcattatttcactgctcaaggcactttattttctctcaagggactacttgacagaaa |
47023735 |
T |
|
| Q |
328 |
gtatcaattctttaagagtgcaaattaactcttaacacgaacaaacctcaaatcgaaccattacaactcacctaaaaaatcgacaaacaacacaacaaca |
427 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||||| |
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| T |
47023734 |
gtatcaattctttaagagtacaaattaactcttaacacgaacaaacctcaaatcaaaccattacaactcacccagaaaatcgacagacaacacaacaaca |
47023635 |
T |
|
| Q |
428 |
agtagtataat |
438 |
Q |
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||||||||||| |
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| T |
47023634 |
agtagtataat |
47023624 |
T |
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