View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0931_low_27 (Length: 328)
Name: NF0931_low_27
Description: NF0931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0931_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 38341532 - 38341745
Alignment:
| Q |
16 |
gtatatgataaatttcttttgtaactgtagcaaacgagagcaccagaaaacgtgttatcttttacacactcttggagtatattttatttgtgggtacaag |
115 |
Q |
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| T |
38341532 |
gtatatgataaatttcttttgtaactgtagcaaacgagagcaccagaaaacgtgttatcttttacacactcttggagtatattttatttgtgggtacaag |
38341631 |
T |
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| Q |
116 |
cttattgcaagtcgtatacattcgtcgtctcttcagcaaatcatttgcttacaaccgagtgtagaatcacaatgtattgtggtgacaattattttgtttt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38341632 |
cttattgcaagtcgtatacattcgtcgtctcttcagcaaatcatttgcttacaaccgagtgtagaatcacaatgtattgtggtgacaattattttgtttt |
38341731 |
T |
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| Q |
216 |
tcctattgatcatt |
229 |
Q |
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|||||||||||||| |
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| T |
38341732 |
tcctattgatcatt |
38341745 |
T |
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