View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0931_low_41 (Length: 280)
Name: NF0931_low_41
Description: NF0931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0931_low_41 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 34 - 231
Target Start/End: Original strand, 14349930 - 14350127
Alignment:
| Q |
34 |
agatgaataataggaatataatagagggatattgatgtagaaacgacctctcataatgtttatgattttagtagctctcacttactgaattatacacatc |
133 |
Q |
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| T |
14349930 |
agataaataacaggaatataatagagggatattgatgtagaaacgacctctcataatgtttatgattttagtagctctcacttactgaattatacacatc |
14350029 |
T |
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| Q |
134 |
acatgtattcatattgcgaacaaactaactcagttgtatctaagtttaaactaagtttgtaacaactattaactaactacaataaaaatgtgatatgt |
231 |
Q |
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| T |
14350030 |
acatgtattcatattgcgaacaaactaactcagttgtatctaagtttaaactaagtttgtaacaactattaactaactacaataaaaatgtgatatgt |
14350127 |
T |
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